BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00030286
         (424 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006576519.1| replication protein 2a [Amazon lily mild mot...   112   5e-23
gb|AHJ89006.1| putative polymerase [Cassava Ivorian bacilliform ...   111   1e-22
gb|AFU72537.1| protein 2a [Pelargonium zonate spot virus]              57   3e-06
ref|NP_619771.1| putative 2a protein [Pelargonium zonate spot vi...    55   1e-05

>ref|YP_006576519.1| replication protein 2a [Amazon lily mild mottle virus]
           gi|398650494|dbj|BAM34544.1| replication protein 2a
           [Amazon lily mild mottle virus]
          Length = 657

 Score =  112 bits (280), Expect = 5e-23
 Identities = 52/68 (76%), Positives = 59/68 (86%), Gaps = 2/68 (2%)
 Frame = +3

Query: 3   MIDQLKVYFDMKYNKGKDCIDDFLGGCIYYADNFKHFCELY--NTHAVEVRALVTLVDKG 176
           MIDQLKVYFD+KYNKGKDCIDDFLGGCIYYADNFKHFCEL+  ++HA+EV ALV  VD  
Sbjct: 590 MIDQLKVYFDIKYNKGKDCIDDFLGGCIYYADNFKHFCELFVNHSHAIEVGALVNFVDDK 649

Query: 177 SLRLPSRI 200
            L +PSR+
Sbjct: 650 PLGIPSRL 657


>gb|AHJ89006.1| putative polymerase [Cassava Ivorian bacilliform virus]
          Length = 680

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/66 (81%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
 Frame = +3

Query: 3   MIDQLKVYFDMKYNKGKDCIDDFLGGCIYYADNFKHFCELYNT-HAVEVRALVTLVDKGS 179
           MIDQLKVYFDMKY KGKDCIDDFLGGCIYYADNF+HF EL+ T  A+EV+ALV LVDKG 
Sbjct: 614 MIDQLKVYFDMKYKKGKDCIDDFLGGCIYYADNFQHFKELFFTPQAIEVKALVNLVDKGC 673

Query: 180 LRLPSR 197
           L LPSR
Sbjct: 674 LGLPSR 679


>gb|AFU72537.1| protein 2a [Pelargonium zonate spot virus]
          Length = 687

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = +3

Query: 6   IDQLKVYFDMKYNKGKDCIDDFLGGCIYYADNFKHFCELY-NTHAVEVRALVTLVDKGSL 182
           I QLK++F++KY +  + I+D++G C++Y+DNFK+F  L+  T+A  V AL   V     
Sbjct: 622 IQQLKIFFNLKYKQSGEVIEDYMGACMFYSDNFKNFKTLFTKTNAPLVAALNKRVKDKPF 681

Query: 183 RLP 191
           RLP
Sbjct: 682 RLP 684


>ref|NP_619771.1| putative 2a protein [Pelargonium zonate spot virus]
           gi|81968684|sp|Q9DUT2.1|RDRP_PZSVT RecName:
           Full=RNA-directed RNA polymerase 2a; Short=protein 2a
           gi|10185104|emb|CAC08527.1| putative 2a protein
           [Pelargonium zonate spot virus]
          Length = 687

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = +3

Query: 6   IDQLKVYFDMKYNKGKDCIDDFLGGCIYYADNFKHFCELY-NTHAVEVRALVTLVDKGSL 182
           I QLK++F++KY +  + I+D++G C++Y+DNFK+F  L+  T A  V AL   V     
Sbjct: 622 IQQLKIFFNLKYKQSGEVIEDYMGACMFYSDNFKNFKTLFTKTCAPLVAALNKRVKDKPF 681

Query: 183 RLP 191
           RLP
Sbjct: 682 RLP 684