BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00028638
         (886 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339424.1| PREDICTED: pentatricopeptide repeat-containi...   194   9e-62
ref|XP_004229464.1| PREDICTED: pentatricopeptide repeat-containi...   192   6e-61
gb|EOY06281.1| Tetratricopeptide repeat-like superfamily protein...   173   1e-51
emb|CBI26162.3| unnamed protein product [Vitis vinifera]              176   4e-51
ref|XP_006489230.1| PREDICTED: pentatricopeptide repeat-containi...   169   2e-50
ref|XP_004297017.1| PREDICTED: pentatricopeptide repeat-containi...   164   4e-48
ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containi...   165   3e-47
ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containi...   165   3e-47
ref|XP_006419767.1| hypothetical protein CICLE_v10007051mg, part...   160   7e-47
ref|XP_004491488.1| PREDICTED: pentatricopeptide repeat-containi...   135   4e-39
ref|XP_006289665.1| hypothetical protein CARUB_v10003224mg [Caps...   152   1e-37
gb|EPS61555.1| hypothetical protein M569_13242, partial [Genlise...   120   9e-37
ref|XP_002873920.1| pentatricopeptide repeat-containing protein ...   148   1e-36
ref|NP_197396.1| pentatricopeptide repeat-containing protein [Ar...   148   5e-36
gb|ABD96889.1| hypothetical protein [Cleome spinosa]                  133   7e-36
gb|ESW25446.1| hypothetical protein PHAVU_003G036500g [Phaseolus...   115   3e-33
ref|XP_003617724.1| Pentatricopeptide repeat-containing protein ...   119   9e-33
ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containi...   132   1e-28
gb|EOY06282.1| Tetratricopeptide repeat-like superfamily protein...    84   9e-25
gb|EMJ18641.1| hypothetical protein PRUPE_ppb015972mg [Prunus pe...    68   1e-18

>ref|XP_006339424.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Solanum tuberosum]
          Length = 601

 Score =  194 bits (493), Expect(2) = 9e-62
 Identities = 114/218 (52%), Positives = 133/218 (61%), Gaps = 2/218 (0%)
 Frame = -2

Query: 795 MARLPSFFSNLYIRQNPKSFQGTTPQIRTRNLSIDPINGS--SEEVLQHFRKPDEFFAQN 622
           MAR P F ++L  RQN  S          RNLSI   NG    E   Q+  +      Q+
Sbjct: 1   MARPPFFVTSLCTRQNVSS--------PIRNLSIAGSNGGVEGEVATQNADRSSSVNHQS 52

Query: 621 QIMSVSEIAKEVADRIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYLW 442
           +  S +EIAK+V   IRTRPRWEQ LLSDFPTVNFTDP  Y EVLK Q NV  SLRF+ W
Sbjct: 53  EQQSFAEIAKDVCKVIRTRPRWEQILLSDFPTVNFTDPRFYTEVLKAQKNVMLSLRFHFW 112

Query: 441 LRSLNGSSTDPVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGLID 262
           L S NG S D     V+FS LVQA AA AAK F  +  F P+P  LE YI+CL ENGLI+
Sbjct: 113 LSSQNGFSRDQFSDEVIFSGLVQAKAASAAKCFRQNMNFVPQPSCLEAYIQCLCENGLIE 172

Query: 261 EALDVLGRLKLSGYRVSLETWNSALSHSVRTKRVDVVW 148
           +ALDV   L+  G+  SL  WNSALS S+R  R D+VW
Sbjct: 173 DALDVFTELRGVGHCPSLRIWNSALSDSIRAGRTDIVW 210



 Score = 70.5 bits (171), Expect(2) = 9e-62
 Identities = 32/47 (68%), Positives = 38/47 (80%)
 Frame = -3

Query: 143 LYEDMMAYGVVTDVNTISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           LYEDM   GVV DV+TI HLIQAFC+EN   +G++LL+QVLEAGH P
Sbjct: 212 LYEDMTESGVVADVDTIGHLIQAFCMENKFPEGHQLLRQVLEAGHAP 258


>ref|XP_004229464.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Solanum lycopersicum]
          Length = 601

 Score =  192 bits (487), Expect(2) = 6e-61
 Identities = 113/218 (51%), Positives = 132/218 (60%), Gaps = 2/218 (0%)
 Frame = -2

Query: 795 MARLPSFFSNLYIRQNPKSFQGTTPQIRTRNLSIDPING--SSEEVLQHFRKPDEFFAQN 622
           MAR P F  +L  RQN  S          RNLSI   NG    E   Q+  +      Q+
Sbjct: 1   MARPPFFVRSLCTRQNFNS--------PIRNLSIAGTNGRVEGEVAAQNADRSSSVNHQS 52

Query: 621 QIMSVSEIAKEVADRIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYLW 442
           + +S +EIAK+V   IRTRPRWEQ LLSDFPTVNFTDP  Y EVLK Q N+  SLRF+ W
Sbjct: 53  EQLSFAEIAKDVCKVIRTRPRWEQILLSDFPTVNFTDPRFYTEVLKAQKNIMLSLRFHFW 112

Query: 441 LRSLNGSSTDPVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGLID 262
           L S NG S D     V+FS LVQA AA AAK F  +  F P+P  LE YI+CL ENGLI+
Sbjct: 113 LSSQNGFSRDQFSDEVIFSGLVQAKAASAAKCFRQNMIFVPQPNCLEAYIQCLCENGLIE 172

Query: 261 EALDVLGRLKLSGYRVSLETWNSALSHSVRTKRVDVVW 148
           +ALDV   L+  G+  SL  WNSALS S+R  R D VW
Sbjct: 173 DALDVFTELRSVGHCPSLRIWNSALSDSIRAGRTDTVW 210



 Score = 70.1 bits (170), Expect(2) = 6e-61
 Identities = 32/47 (68%), Positives = 36/47 (76%)
 Frame = -3

Query: 143 LYEDMMAYGVVTDVNTISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           LYEDM   GVV DV TI HLIQAFC+ENN   G++LL+Q LEAGH P
Sbjct: 212 LYEDMTESGVVADVGTIGHLIQAFCMENNFPDGHQLLRQALEAGHAP 258


>gb|EOY06281.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           1 [Theobroma cacao]
          Length = 610

 Score =  173 bits (439), Expect(2) = 1e-51
 Identities = 100/221 (45%), Positives = 132/221 (59%), Gaps = 5/221 (2%)
 Frame = -2

Query: 795 MARLPSFFSNLYIRQNPKSFQGTTPQIRTRNLSIDP-----INGSSEEVLQHFRKPDEFF 631
           MAR  SF   L +RQNP+  Q    QIR  NLS+D      I     E+    R+ D+  
Sbjct: 1   MARASSFLITL-LRQNPRRLQSPNTQIR--NLSVDSKETNFIAKELREIQNQSRETDDAI 57

Query: 630 AQNQIMSVSEIAKEVADRIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRF 451
            Q  +    +I K+V    RT PRWE+ LLS FP+ NF+DP+ + E+L+ Q NVF SL F
Sbjct: 58  NQPNL----DIVKQVCKITRTIPRWEENLLSKFPSFNFSDPVFFRELLRQQENVFLSLCF 113

Query: 450 YLWLRSLNGSSTDPVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENG 271
           + WLRS    S D   CNV+F +LV+ANA  AA+NFL+ T F PEP+ LELY+R L E G
Sbjct: 114 FHWLRSKYDFSPDLDSCNVLFDKLVEANACKAARNFLEQTGFSPEPRALELYLRRLCEVG 173

Query: 270 LIDEALDVLGRLKLSGYRVSLETWNSALSHSVRTKRVDVVW 148
           L++EA+++   L   GYR S+ TWN AL   ++  R D VW
Sbjct: 174 LVEEAVEMFSMLNKIGYRPSVATWNLALLAFLKVGRNDFVW 214



 Score = 57.4 bits (137), Expect(2) = 1e-51
 Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
 Frame = -3

Query: 143 LYEDMMAYGVVTDVN--TISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           LY+DM+  GVV D++  T+  LIQAFC + N +KGYELL+QVLE G VP
Sbjct: 216 LYQDMIDSGVVVDIDVATVGCLIQAFCNDGNASKGYELLRQVLEDGLVP 264


>emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  176 bits (445), Expect(2) = 4e-51
 Identities = 104/220 (47%), Positives = 129/220 (58%), Gaps = 4/220 (1%)
 Frame = -2

Query: 795 MARLPSFFSNL--YIRQNPKSFQGTTPQIRTRNLSIDPIN--GSSEEVLQHFRKPDEFFA 628
           MAR PS  S++  ++RQNP S        R RNL +   N  G  E   QH +       
Sbjct: 46  MAR-PSSSSSVISFLRQNPNS--------RIRNLGVVSGNQYGDVEGAHQHTQ------- 89

Query: 627 QNQIMSVSEIAKEVADRIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFY 448
             Q   + EI K V+D  RTRPRWEQTLLSDFP+ NF DP   +  ++ Q N   SLRF+
Sbjct: 90  --QQQHLEEIVKRVSDITRTRPRWEQTLLSDFPSFNFLDPTFLSHFVEHQKNALISLRFF 147

Query: 447 LWLRSLNGSSTDPVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGL 268
            WL S +G S D   CNV+F  LV+A A  AAK+FLD T F P+P  LE YIRCL + GL
Sbjct: 148 HWLSSQSGFSPDSSSCNVLFDALVEAGACNAAKSFLDSTNFNPKPASLEAYIRCLCKGGL 207

Query: 267 IDEALDVLGRLKLSGYRVSLETWNSALSHSVRTKRVDVVW 148
           ++EA+ V G+LK  G   S+ TWNS L  SVR  R+D VW
Sbjct: 208 VEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVW 247



 Score = 53.5 bits (127), Expect(2) = 4e-51
 Identities = 24/47 (51%), Positives = 35/47 (74%)
 Frame = -3

Query: 143 LYEDMMAYGVVTDVNTISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           LY +M+   VV DV+T+ +L+QAFC EN ++ G+ LL++VLE G VP
Sbjct: 249 LYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVP 295


>ref|XP_006489230.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Citrus sinensis]
          Length = 589

 Score =  169 bits (429), Expect(2) = 2e-50
 Identities = 100/217 (46%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
 Frame = -2

Query: 795 MARLPSFFSNLYI-RQNPKSFQGTTPQIRTRNLSIDPINGSSEEVLQHFRKPDEFFAQNQ 619
           M R P  FS L I RQNP+ FQ   P  + RNLSI+     ++E  Q +           
Sbjct: 1   MGRAP--FSVLTILRQNPRIFQN--PNTQLRNLSIE-----TKESQQLY----------- 40

Query: 618 IMSVSEIAKEVADRIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYLWL 439
               +EIAK+V    RT+PRWEQTLLSDFP+ NF DP+ + E LK Q+N+  S+RF+ WL
Sbjct: 41  ----TEIAKQVCKITRTKPRWEQTLLSDFPSFNFNDPLFFREFLKQQNNMLLSIRFFQWL 96

Query: 438 RSLNGSSTDPVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGLIDE 259
            S  G S D   CNV+F  LV+A A   A +FLD T F P P  LELYI+CL E+G+I+E
Sbjct: 97  HSHYGFSPDLDSCNVLFDSLVEARAFKVAMDFLDITGFSPNPNSLELYIQCLCESGMIEE 156

Query: 258 ALDVLGRLKLSGYRVSLETWNSALSHSVRTKRVDVVW 148
           A  V  +LK  G   S++TWNSAL   ++  R D++W
Sbjct: 157 AFRVFSKLKEMGVFGSIKTWNSALLGCIKVDRTDLLW 193



 Score = 57.0 bits (136), Expect(2) = 2e-50
 Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
 Frame = -3

Query: 143 LYEDMMAYGVVTDVN--TISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           LY DM+  G+V DV+  TI +LIQAFC +  V++GYELL+QVLE G VP
Sbjct: 195 LYHDMIESGIVADVDAETIGYLIQAFCNDGKVSEGYELLRQVLEDGLVP 243


>ref|XP_004297017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Fragaria vesca subsp. vesca]
          Length = 382

 Score =  164 bits (416), Expect(2) = 4e-48
 Identities = 85/205 (41%), Positives = 124/205 (60%)
 Frame = -2

Query: 762 YIRQNPKSFQGTTPQIRTRNLSIDPINGSSEEVLQHFRKPDEFFAQNQIMSVSEIAKEVA 583
           ++RQNP + Q   P  + R+LS++  + S                      ++++A+++ 
Sbjct: 11  FLRQNPHARQ--KPDTQIRHLSVETKDCSD---------------------LTQVAQQIC 47

Query: 582 DRIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYLWLRSLNGSSTDPVL 403
             IRT+PRWE TL S++P+ NF+DP+   EV+K QSNVF S+RF+LWL +  G S DP+ 
Sbjct: 48  HVIRTKPRWENTLSSEYPSSNFSDPLFIREVVKQQSNVFLSVRFFLWLGTREGFSPDPIS 107

Query: 402 CNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGLIDEALDVLGRLKLSG 223
           CN +F  LV+ NA  AAK+F+  T F PEP  LE Y RCL+E G + EA  V  RLK +G
Sbjct: 108 CNAVFGALVEGNACSAAKSFIKHTGFSPEPVLLESYARCLWEAGRVKEASSVFKRLKEAG 167

Query: 222 YRVSLETWNSALSHSVRTKRVDVVW 148
               + TWN+ALS  ++ +R D+VW
Sbjct: 168 VCPGIGTWNAALSGCIKARRTDMVW 192



 Score = 54.7 bits (130), Expect(2) = 4e-48
 Identities = 25/47 (53%), Positives = 32/47 (68%)
 Frame = -3

Query: 143 LYEDMMAYGVVTDVNTISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           LY++MM YGV  DV T+  L++ +C +N V KGY LL QVL  G VP
Sbjct: 194 LYQEMMEYGVAADVETVECLVRGYCDDNEVLKGYGLLSQVLGDGVVP 240


>ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 638

 Score =  165 bits (418), Expect(2) = 3e-47
 Identities = 90/213 (42%), Positives = 128/213 (60%)
 Frame = -2

Query: 759 IRQNPKSFQGTTPQIRTRNLSIDPINGSSEEVLQHFRKPDEFFAQNQIMSVSEIAKEVAD 580
           IRQN +  +    +I  RNLS++   G++    +     ++     Q   VSEIA EV  
Sbjct: 47  IRQNSRFVKNL--RIHIRNLSVETNGGNNGR--EEIESSEKLLNLTQRKDVSEIAAEVGK 102

Query: 579 RIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYLWLRSLNGSSTDPVLC 400
            IR++PRWEQ+LLSD+P+ NF DP  ++E+LK  +NVF SLRF+LWL S       PV C
Sbjct: 103 VIRSKPRWEQSLLSDYPSFNFHDPSFFSELLKQLNNVFLSLRFFLWLSSQPEFLPHPVSC 162

Query: 399 NVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGLIDEALDVLGRLKLSGY 220
           N +F  L++A A   AK+FL   +F PEP  LE YIRC+ E GL++EA+     LK +GY
Sbjct: 163 NKLFDALLEAKACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGY 222

Query: 219 RVSLETWNSALSHSVRTKRVDVVWLIV*RYDGI 121
           R  +ETWN A    ++  R D++W +   Y+G+
Sbjct: 223 RPYVETWNFAFQSCLKFGRTDLIWKL---YEGM 252



 Score = 50.8 bits (120), Expect(2) = 3e-47
 Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
 Frame = -3

Query: 143 LYEDMMAYGVVTDVN--TISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           LYE MM  GV  DV+  T+ +LIQAFC +N V++ YE+L+Q LE G  P
Sbjct: 248 LYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTP 296


>ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 602

 Score =  165 bits (418), Expect(2) = 3e-47
 Identities = 90/213 (42%), Positives = 128/213 (60%)
 Frame = -2

Query: 759 IRQNPKSFQGTTPQIRTRNLSIDPINGSSEEVLQHFRKPDEFFAQNQIMSVSEIAKEVAD 580
           IRQN +  +    +I  RNLS++   G++    +     ++     Q   VSEIA EV  
Sbjct: 11  IRQNSRFVKNL--RIHIRNLSVETNGGNNGR--EEIESSEKLLNLTQRKDVSEIAAEVGK 66

Query: 579 RIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYLWLRSLNGSSTDPVLC 400
            IR++PRWEQ+LLSD+P+ NF DP  ++E+LK  +NVF SLRF+LWL S       PV C
Sbjct: 67  VIRSKPRWEQSLLSDYPSFNFHDPSFFSELLKQLNNVFLSLRFFLWLSSQPEFLPHPVSC 126

Query: 399 NVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGLIDEALDVLGRLKLSGY 220
           N +F  L++A A   AK+FL   +F PEP  LE YIRC+ E GL++EA+     LK +GY
Sbjct: 127 NKLFDALLEAKACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGY 186

Query: 219 RVSLETWNSALSHSVRTKRVDVVWLIV*RYDGI 121
           R  +ETWN A    ++  R D++W +   Y+G+
Sbjct: 187 RPYVETWNFAFQSCLKFGRTDLIWKL---YEGM 216



 Score = 50.8 bits (120), Expect(2) = 3e-47
 Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
 Frame = -3

Query: 143 LYEDMMAYGVVTDVN--TISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           LYE MM  GV  DV+  T+ +LIQAFC +N V++ YE+L+Q LE G  P
Sbjct: 212 LYEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTP 260


>ref|XP_006419767.1| hypothetical protein CICLE_v10007051mg, partial [Citrus clementina]
           gi|557521640|gb|ESR33007.1| hypothetical protein
           CICLE_v10007051mg, partial [Citrus clementina]
          Length = 540

 Score =  160 bits (404), Expect(2) = 7e-47
 Identities = 79/153 (51%), Positives = 102/153 (66%)
 Frame = -2

Query: 606 SEIAKEVADRIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYLWLRSLN 427
           +EIAK+V    RT+PRWEQTLLSDFP+ NF DP+ + E LK Q+N+  S+RF+ WL S  
Sbjct: 9   TEIAKQVCKITRTKPRWEQTLLSDFPSFNFNDPLFFREFLKQQNNMLLSIRFFQWLHSHY 68

Query: 426 GSSTDPVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGLIDEALDV 247
           G S D   CNV+F  LV+A A   AK FL  T F P P  LELYI+CL E+G+I+EA  V
Sbjct: 69  GFSPDLDSCNVLFDSLVEARAFKVAKEFLAITGFSPNPNSLELYIQCLCESGMIEEAFRV 128

Query: 246 LGRLKLSGYRVSLETWNSALSHSVRTKRVDVVW 148
             +LK  G   S++TWNSAL   ++  R D++W
Sbjct: 129 FSKLKEMGVFGSIKTWNSALLGCIKVDRTDLLW 161



 Score = 55.1 bits (131), Expect(2) = 7e-47
 Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
 Frame = -3

Query: 143 LYEDMMAYGVVTDVN--TISHLIQAFCLENNVAKGYELLQQVLEAG 12
           LY DM+  G+V DV+  TI +LIQAFC +  VA+GYELL+QVLE G
Sbjct: 163 LYHDMIESGIVADVDAETIGYLIQAFCNDGKVAEGYELLRQVLEDG 208


>ref|XP_004491488.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like isoform X1 [Cicer arietinum]
           gi|502099479|ref|XP_004491489.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g18950-like isoform X2 [Cicer arietinum]
          Length = 598

 Score =  135 bits (339), Expect(2) = 4e-39
 Identities = 69/156 (44%), Positives = 95/156 (60%)
 Frame = -2

Query: 609 VSEIAKEVADRIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYLWLRSL 430
           +++I  E+    RT+PRWE TLLS +P+ NF+DP  +   L  Q+N F SLRF  WL S 
Sbjct: 53  LTDIVDEICKITRTKPRWENTLLSQYPSFNFSDPNFFLLYLNHQNNSFLSLRFLHWLSSH 112

Query: 429 NGSSTDPVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGLIDEALD 250
              S D   CNV+F  LV A A  AAK+ LD   F P+P  LE YIRCL   G++++ALD
Sbjct: 113 CSFSPDQSSCNVLFDALVDAEACKAAKSLLDYPGFTPKPASLESYIRCLINGGMVEDALD 172

Query: 249 VLGRLKLSGYRVSLETWNSALSHSVRTKRVDVVWLI 142
           V   LK  G+  S+ T+N++L   ++  R D+VW +
Sbjct: 173 VFVTLKKVGFLPSVSTFNASLLACLKVGRTDLVWTL 208



 Score = 53.9 bits (128), Expect(2) = 4e-39
 Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
 Frame = -3

Query: 143 LYEDMMAYGVVT--DVNTISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           LYE M+  G+V   DV T+ +LI+AFC EN V  GYELL+QVL+ G  P
Sbjct: 208 LYERMLESGIVASIDVETVGYLIKAFCAENKVFNGYELLRQVLDKGLCP 256


>ref|XP_006289665.1| hypothetical protein CARUB_v10003224mg [Capsella rubella]
           gi|482558371|gb|EOA22563.1| hypothetical protein
           CARUB_v10003224mg [Capsella rubella]
          Length = 486

 Score =  152 bits (383), Expect(2) = 1e-37
 Identities = 88/219 (40%), Positives = 130/219 (59%), Gaps = 3/219 (1%)
 Frame = -2

Query: 795 MARLPSFFSNLY---IRQNPKSFQGTTPQIRTRNLSIDPINGSSEEVLQHFRKPDEFFAQ 625
           M+R  S+  +L    IRQNP +        + R+L+++  +  S        KPDE  + 
Sbjct: 1   MSRGQSYLISLVRKRIRQNPNA--------QMRSLALESRDSES--------KPDEQKSA 44

Query: 624 NQIMSVSEIAKEVADRIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYL 445
               + +E+AK V+  +R R RW+QTL+SDFP+ NF DP+ + E+LK Q+NV FSL F+ 
Sbjct: 45  GGGTTYTEMAKTVSTVMRERQRWQQTLVSDFPSFNFADPLFFRELLKSQNNVLFSLWFFR 104

Query: 444 WLRSLNGSSTDPVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGLI 265
           WL S    + DP   +++F  L+ A A  AAK+FLD T F+PEP  LE Y++CL E+GL+
Sbjct: 105 WLCSNYDYAPDPASLSLLFGALLDAKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEDGLV 164

Query: 264 DEALDVLGRLKLSGYRVSLETWNSALSHSVRTKRVDVVW 148
           +EA+DV   LK  G   S+ T NS L   V+ +++D  W
Sbjct: 165 EEAIDVYNVLKEMGISPSIVTCNSVLLGCVKARKLDCFW 203



 Score = 32.3 bits (72), Expect(2) = 1e-37
 Identities = 22/55 (40%), Positives = 31/55 (56%)
 Frame = -3

Query: 167 KELMLFG*LYEDMMAYGVVTDVNTISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           ++L  F  L++ MM   V  D+  I  LI A C    V++GYELL+Q L+ G  P
Sbjct: 197 RKLDCFWELHQKMMESEV--DLERIRCLILALCDAGEVSEGYELLRQGLKQGLDP 249


>gb|EPS61555.1| hypothetical protein M569_13242, partial [Genlisea aurea]
          Length = 360

 Score =  120 bits (302), Expect(2) = 9e-37
 Identities = 57/107 (53%), Positives = 76/107 (71%)
 Frame = -2

Query: 462 SLRFYLWLRSLNGSSTDPVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCL 283
           S RFY WL S NG S+DP L  +MFSRL ++N   +A+ FL +T+FEPEP+ LELYIR L
Sbjct: 6   SFRFYKWLESRNGHSSDPTLRKLMFSRLAKSNGIDSARAFLKETEFEPEPRDLELYIRSL 65

Query: 282 FENGLIDEALDVLGRLKLSGYRVSLETWNSALSHSVRTKRVDVVWLI 142
             NG +DEA+ ++  L+ +GY VSL+TWN AL  SV  +RV+V W +
Sbjct: 66  CRNGFVDEAVGIIKTLRTAGYCVSLQTWNLALGSSVTARRVNVTWTL 112



 Score = 60.5 bits (145), Expect(2) = 9e-37
 Identities = 27/47 (57%), Positives = 36/47 (76%)
 Frame = -3

Query: 143 LYEDMMAYGVVTDVNTISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           L+ +M+  G  T+V TI HLI+AFCLE N+AK Y LL+Q+L+AGH P
Sbjct: 112 LHSEMIESGAETNVETIGHLIRAFCLEKNLAKAYGLLRQLLDAGHFP 158


>ref|XP_002873920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319757|gb|EFH50179.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 483

 Score =  148 bits (373), Expect(2) = 1e-36
 Identities = 86/217 (39%), Positives = 128/217 (58%)
 Frame = -2

Query: 798 GMARLPSFFSNLYIRQNPKSFQGTTPQIRTRNLSIDPINGSSEEVLQHFRKPDEFFAQNQ 619
           G + L +FF N   RQNP +        + R+L+++  +  S        KPDE   Q  
Sbjct: 4   GQSYLINFFRNR-TRQNPNA--------QIRSLTVESRDSES--------KPDE---QKS 43

Query: 618 IMSVSEIAKEVADRIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYLWL 439
            +S +E+AK V+  +R R RW+QTL+SDFP+ +F DP+ + ++LK Q+NV FSL F+ WL
Sbjct: 44  AVSYTEMAKTVSTIMRQRQRWQQTLVSDFPSFDFADPLFFRQLLKSQNNVMFSLWFFRWL 103

Query: 438 RSLNGSSTDPVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGLIDE 259
            S    + D V  N++F  L+   A  AAK+FLD T F+PEP  LE Y++CL E GL++E
Sbjct: 104 CSNYDYTPDSVSLNLLFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEE 163

Query: 258 ALDVLGRLKLSGYRVSLETWNSALSHSVRTKRVDVVW 148
           A++V   LK  G   S+ T NS L   ++ +++D  W
Sbjct: 164 AIEVYNVLKEMGISSSVVTCNSVLLGCLKARKLDRFW 200



 Score = 32.3 bits (72), Expect(2) = 1e-36
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = -3

Query: 107 DVNTISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           D+  I  LIQA C    V++GYELL+Q L+ G  P
Sbjct: 212 DLERIRCLIQALCDGGEVSEGYELLKQGLKQGLDP 246


>ref|NP_197396.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635758|sp|Q8GYM2.2|PP393_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g18950 gi|332005249|gb|AED92632.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 483

 Score =  148 bits (374), Expect(2) = 5e-36
 Identities = 87/217 (40%), Positives = 128/217 (58%)
 Frame = -2

Query: 798 GMARLPSFFSNLYIRQNPKSFQGTTPQIRTRNLSIDPINGSSEEVLQHFRKPDEFFAQNQ 619
           G + L SFF N   R+NP +        + R+L+++  +  S        KPDE   Q  
Sbjct: 4   GQSYLISFFRNR-TRKNPNT--------QIRSLTVESRDCES--------KPDE---QKS 43

Query: 618 IMSVSEIAKEVADRIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYLWL 439
            +S +E+AK V+  +R R RW+QTL+SDFP+ +F DP+ + E+LK Q+NV FSL F+ WL
Sbjct: 44  AVSYTEMAKTVSTIMRERQRWQQTLVSDFPSFDFADPLFFGELLKSQNNVLFSLWFFRWL 103

Query: 438 RSLNGSSTDPVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGLIDE 259
            S    +  PV  N++F  L+   A  AAK+FLD T F+PEP  LE Y++CL E GL++E
Sbjct: 104 CSNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEE 163

Query: 258 ALDVLGRLKLSGYRVSLETWNSALSHSVRTKRVDVVW 148
           A++V   LK  G   S+ T NS L   ++ +++D  W
Sbjct: 164 AIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFW 200



 Score = 30.0 bits (66), Expect(2) = 5e-36
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -3

Query: 107 DVNTISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           D   I  LI+A C   +V++GYELL+Q L+ G  P
Sbjct: 212 DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDP 246


>gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  133 bits (334), Expect(2) = 7e-36
 Identities = 72/192 (37%), Positives = 112/192 (58%)
 Frame = -2

Query: 723 PQIRTRNLSIDPINGSSEEVLQHFRKPDEFFAQNQIMSVSEIAKEVADRIRTRPRWEQTL 544
           P  + RNLS+D  +G SE         +         + +E+AK VA   R +PRWEQTL
Sbjct: 20  PNAQLRNLSVDGKDGVSEAEGSGSIGGERVSQDISRRNYTEMAKIVATITREKPRWEQTL 79

Query: 543 LSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYLWLRSLNGSSTDPVLCNVMFSRLVQANA 364
           +SDFP+ NF DP+ + E++  Q+NV  SLRF+ WL + +  + DP+  N++F  L+ A A
Sbjct: 80  VSDFPSFNFADPLFFRELVATQNNVLLSLRFFQWLCTNHDCTPDPISSNMLFEALLDAKA 139

Query: 363 AYAAKNFLDDTKFEPEPQHLELYIRCLFENGLIDEALDVLGRLKLSGYRVSLETWNSALS 184
             AAK   D   F P+   LE Y++CL   G I+EA++V  +LK +G R+S+   NS LS
Sbjct: 140 VRAAKMVRDIAGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILS 199

Query: 183 HSVRTKRVDVVW 148
             ++  + ++++
Sbjct: 200 GCLKAGKTELLF 211



 Score = 45.1 bits (105), Expect(2) = 7e-36
 Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
 Frame = -3

Query: 140 YEDMMAYGVVTDVNT--ISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           Y++M+  G  +D NT  +  LIQAFC    VA+GYELL Q L+ G  P
Sbjct: 214 YQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDP 261


>gb|ESW25446.1| hypothetical protein PHAVU_003G036500g [Phaseolus vulgaris]
          Length = 593

 Score =  115 bits (288), Expect(2) = 3e-33
 Identities = 62/150 (41%), Positives = 87/150 (58%)
 Frame = -2

Query: 591 EVADRIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYLWLRSLNGSSTD 412
           E+    R++PRWE  LLS +P+ NF+DP  +   L  Q+N   SLRF+ WL S  G S D
Sbjct: 54  EICRITRSKPRWEDNLLSLYPSFNFSDPSFFLLYLNHQNNALLSLRFFHWLCSSCGFSPD 113

Query: 411 PVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGLIDEALDVLGRLK 232
               N +F  LV A A  AAK  LD     PEP  LE YI+CL   G++++A+D+   LK
Sbjct: 114 QASYNALFCALVDAGACKAAKALLDCPGLTPEPASLEGYIQCLSRTGMVEDAVDM---LK 170

Query: 231 LSGYRVSLETWNSALSHSVRTKRVDVVWLI 142
             G+  S+ TWN++L   +R  R ++VW +
Sbjct: 171 QVGFCPSVTTWNASLLSCLRAGRTNLVWTL 200



 Score = 53.9 bits (128), Expect(2) = 3e-33
 Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
 Frame = -3

Query: 143 LYEDMMAYGVVTDVN--TISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           LYE MM  GVV  +N  T+ +LI  FC EN V KGYELL+++LE G  P
Sbjct: 200 LYEQMMESGVVASINVETVGYLIMTFCAENKVLKGYELLRELLENGLHP 248


>ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519059|gb|AET00683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 861

 Score =  119 bits (297), Expect(2) = 9e-33
 Identities = 61/153 (39%), Positives = 87/153 (56%)
 Frame = -2

Query: 606 SEIAKEVADRIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYLWLRSLN 427
           ++   E+    R++PRWE TL+S +P+ NF++P  +   LK Q+N F SLRF  WL S  
Sbjct: 32  TQTLNEICTITRSKPRWENTLISQYPSFNFSNPKFFLSYLKHQNNTFLSLRFLHWLTSHC 91

Query: 426 GSSTDPVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGLIDEALDV 247
           G   D   CN +F  LV A A  AAK+ L+   F P+   LE Y+R L ENG+++E  DV
Sbjct: 92  GFKPDQSSCNALFDALVDAGAVKAAKSLLEYPDFVPKNDSLEGYVRLLGENGMVEEVFDV 151

Query: 246 LGRLKLSGYRVSLETWNSALSHSVRTKRVDVVW 148
              LK  G+  S  ++N  L   ++  R D+VW
Sbjct: 152 FVSLKKVGFLPSASSFNVCLLACLKVGRTDLVW 184



 Score = 48.9 bits (115), Expect(2) = 9e-33
 Identities = 27/46 (58%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
 Frame = -3

Query: 143 LYEDMM--AYGVVTDVNTISHLIQAFCLENNVAKGYELLQQVLEAG 12
           LYE M+    GV  DV T+  LI+AFC EN V  GYELL+QVLE G
Sbjct: 186 LYELMIESGVGVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKG 231


>ref|XP_003530332.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like isoform X1 [Glycine max]
           gi|571466579|ref|XP_006583703.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g18950-like isoform X2 [Glycine max]
          Length = 577

 Score =  132 bits (333), Expect = 1e-28
 Identities = 82/217 (37%), Positives = 114/217 (52%), Gaps = 1/217 (0%)
 Frame = -2

Query: 789 RLPSF-FSNLYIRQNPKSFQGTTPQIRTRNLSIDPINGSSEEVLQHFRKPDEFFAQNQIM 613
           R PS+     Y+R++   F         RNL+ +  NG  E   +     D  F      
Sbjct: 6   RTPSYSLVTFYVRRSIAQF---------RNLTSETKNGDHEHPTKALDAKDCNFVY---- 52

Query: 612 SVSEIAKEVADRIRTRPRWEQTLLSDFPTVNFTDPIVYNEVLKLQSNVFFSLRFYLWLRS 433
                  E+    RT+PRWE TLLS +P+ NF DP  +   LK Q+N F SLRF+ WL S
Sbjct: 53  -------EICRITRTKPRWEDTLLSQYPSFNFKDPSFFLLYLKHQNNAFLSLRFFHWLCS 105

Query: 432 LNGSSTDPVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELYIRCLFENGLIDEAL 253
             G S D   CNV+F  LV A A   AK+ LD   F PEP  LE YI+CL   G++++A+
Sbjct: 106 SCGFSPDQSSCNVLFQVLVDAGAGKLAKSLLDSPGFTPEPASLEGYIQCLSGAGMVEDAV 165

Query: 252 DVLGRLKLSGYRVSLETWNSALSHSVRTKRVDVVWLI 142
           D+L R+    +  S+ TWN++L   +R +R D+VW +
Sbjct: 166 DMLKRVV---FCPSVATWNASLLGCLRARRTDLVWTL 199


>gb|EOY06282.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           2, partial [Theobroma cacao]
          Length = 535

 Score = 83.6 bits (205), Expect(2) = 9e-25
 Identities = 50/123 (40%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
 Frame = -2

Query: 507 IVYNEVLKLQ-SNVFFSLRFYLWLRSLN--GSSTDPVLCNVMFSRLVQANAAYAAKNFLD 337
           ++++ ++KL  + V F+L     + SL+   SS  P   +   + LV+ANA  AA+NFL+
Sbjct: 17  VLFSALVKLTITAVEFTLNLCTVILSLDTISSSNVPTWNSKSNNSLVEANACKAARNFLE 76

Query: 336 DTKFEPEPQHLELYIRCLFENGLIDEALDVLGRLKLSGYRVSLETWNSALSHSVRTKRVD 157
            T F PEP+ LELY+R L E GL++EA+++   L   GYR S+ TWN AL   ++  R D
Sbjct: 77  QTGFSPEPRALELYLRRLCEVGLVEEAVEMFSMLNKIGYRPSVATWNLALLAFLKVGRND 136

Query: 156 VVW 148
            VW
Sbjct: 137 FVW 139



 Score = 57.4 bits (137), Expect(2) = 9e-25
 Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
 Frame = -3

Query: 143 LYEDMMAYGVVTDVN--TISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           LY+DM+  GVV D++  T+  LIQAFC + N +KGYELL+QVLE G VP
Sbjct: 141 LYQDMIDSGVVVDIDVATVGCLIQAFCNDGNASKGYELLRQVLEDGLVP 189


>gb|EMJ18641.1| hypothetical protein PRUPE_ppb015972mg [Prunus persica]
          Length = 221

 Score = 68.2 bits (165), Expect(2) = 1e-18
 Identities = 39/109 (35%), Positives = 54/109 (49%)
 Frame = -2

Query: 474 NVFFSLRFYLWLRSLNGSSTDPVLCNVMFSRLVQANAAYAAKNFLDDTKFEPEPQHLELY 295
           NVF SLR + WL S N  S DP+ CN + S  V+      AK+FL+ T F PE       
Sbjct: 2   NVFLSLRCFFWLSSHNEFSPDPISCNALVSAFVETKVCNPAKSFLEHTSFSPELAS---- 57

Query: 294 IRCLFENGLIDEALDVLGRLKLSGYRVSLETWNSALSHSVRTKRVDVVW 148
            R L+   L+ EA          G   ++ TW +ALS  ++  R D++W
Sbjct: 58  FRKLYSVSLLKEA----------GVCPAIMTWKAALSGCLKVGRTDIIW 96



 Score = 52.4 bits (124), Expect(2) = 1e-18
 Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
 Frame = -3

Query: 143 LYEDMMAYGVVTDVNT--ISHLIQAFCLENNVAKGYELLQQVLEAGHVP 3
           LY++M+  GVV DV    + +LIQAFC +N V +GYELL+QVL  G VP
Sbjct: 98  LYQEMIECGVVADVELRLLGYLIQAFCADNRVLEGYELLRQVLIDGLVP 146