BLASTX nr result

ID: Rehmannia26_contig00028544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00028544
         (548 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527366.1| conserved hypothetical protein [Ricinus comm...    58   2e-06
ref|XP_006338029.1| PREDICTED: crt homolog 3-like isoform X1 [So...    56   6e-06

>ref|XP_002527366.1| conserved hypothetical protein [Ricinus communis]
           gi|223533285|gb|EEF35038.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 429

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 33/85 (38%), Positives = 45/85 (52%)
 Frame = +1

Query: 1   LPLLYIVINIAFNISVLNLLKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFF 180
           LPLLYI+IN+AFNISVLNL+K                                     FF
Sbjct: 345 LPLLYIMINMAFNISVLNLVKLSSAVVSSLAVTLSVPISIYVLSLPLPYLPEGSGLSPFF 404

Query: 181 VLGSLVLMMGLIVYNVSWPLKQDSD 255
           +LGS++L++GL++YNV+ P KQ S+
Sbjct: 405 LLGSMILVLGLVLYNVARPGKQASN 429


>ref|XP_006338029.1| PREDICTED: crt homolog 3-like isoform X1 [Solanum tuberosum]
          Length = 430

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/86 (38%), Positives = 42/86 (48%)
 Frame = +1

Query: 1   LPLLYIVINIAFNISVLNLLKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFF 180
           LPLLYI  NIAFNISVLNL+K                                     FF
Sbjct: 345 LPLLYIFTNIAFNISVLNLMKISSAVISSLVVMSSVPLSVYLLSMPLPYLPQGSSLSPFF 404

Query: 181 VLGSLVLMMGLIVYNVSWPLKQDSDI 258
           +LGS VL++GLI+YN+    KQD+++
Sbjct: 405 LLGSAVLLIGLILYNIPRTQKQDTEL 430


Top