BLASTX nr result
ID: Rehmannia26_contig00028507
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00028507
(359 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY05174.1| ARM repeat superfamily protein, putative [Theobro... 87 3e-15
ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255... 83 3e-14
emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera] 83 3e-14
ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Popu... 80 3e-13
gb|EXC21920.1| hypothetical protein L484_011085 [Morus notabilis] 77 3e-12
ref|XP_006489856.1| PREDICTED: small subunit processome componen... 75 9e-12
ref|XP_006489855.1| PREDICTED: small subunit processome componen... 75 9e-12
ref|XP_006489854.1| PREDICTED: small subunit processome componen... 75 9e-12
ref|XP_002869353.1| hypothetical protein ARALYDRAFT_353720 [Arab... 70 4e-10
ref|XP_004247966.1| PREDICTED: small subunit processome componen... 68 1e-09
ref|XP_004492742.1| PREDICTED: small subunit processome componen... 66 6e-09
gb|ESW35654.1| hypothetical protein PHAVU_001G253000g, partial [... 65 9e-09
gb|EMT18035.1| Small subunit processome component 20-like protei... 64 2e-08
gb|EMS50081.1| Small subunit processome component 20-like protei... 64 2e-08
ref|XP_003601650.1| Small subunit processome component-like prot... 64 2e-08
ref|XP_006646040.1| PREDICTED: U3 small nucleolar RNA-associated... 62 6e-08
ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subuni... 61 2e-07
ref|XP_004139015.1| PREDICTED: small subunit processome componen... 61 2e-07
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 61 2e-07
ref|XP_004305310.1| PREDICTED: small subunit processome componen... 60 4e-07
>gb|EOY05174.1| ARM repeat superfamily protein, putative [Theobroma cacao]
Length = 2725
Score = 86.7 bits (213), Expect = 3e-15
Identities = 46/105 (43%), Positives = 60/105 (57%)
Frame = +2
Query: 44 PFVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQ 223
PF+ LLG CLSSKYE+V+ A+ +S++DK+K +LL IAQGSVN N
Sbjct: 2056 PFIKLLGNCLSSKYEDVLSASLRCLTPLVRLPLPSLESQSDKLKVTLLSIAQGSVNPGNP 2115
Query: 224 XXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
+DQLH+L+QFP+FVDL +NPSFVA
Sbjct: 2116 LMQSCLKFLTVLLRSTKITLSSDQLHLLVQFPMFVDLERNPSFVA 2160
>ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255444 [Vitis vinifera]
Length = 3196
Score = 83.2 bits (204), Expect = 3e-14
Identities = 46/105 (43%), Positives = 59/105 (56%)
Frame = +2
Query: 44 PFVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQ 223
PFV LG CLSSKYE+++ AA +++AD IK++LL IAQ SVNA++
Sbjct: 1548 PFVKQLGSCLSSKYEDILSAALRCIALLVRLPLPALETQADGIKSALLDIAQSSVNANSP 1607
Query: 224 XXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
DQLH+LIQFPLFVDL +NPSF+A
Sbjct: 1608 LMQSCLSLLTALLRSTKITLSTDQLHLLIQFPLFVDLERNPSFIA 1652
>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
Length = 2461
Score = 83.2 bits (204), Expect = 3e-14
Identities = 46/105 (43%), Positives = 59/105 (56%)
Frame = +2
Query: 44 PFVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQ 223
PFV LG CLSSKYE+++ AA +++AD IK++LL IAQ SVNA++
Sbjct: 1812 PFVKQLGSCLSSKYEDILSAALRCIALLVRLPLPALETQADGIKSALLDIAQSSVNANSP 1871
Query: 224 XXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
DQLH+LIQFPLFVDL +NPSF+A
Sbjct: 1872 LMQSCLSLLTALLRSTKITLSTDQLHLLIQFPLFVDLERNPSFIA 1916
>ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Populus trichocarpa]
gi|550348719|gb|ERP66384.1| hypothetical protein
POPTR_0001s32620g [Populus trichocarpa]
Length = 2597
Score = 80.1 bits (196), Expect = 3e-13
Identities = 44/105 (41%), Positives = 59/105 (56%)
Frame = +2
Query: 44 PFVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQ 223
PFV LLG CLSS YE+++ A+ S+AD+IK +LL IAQ SVN+S+
Sbjct: 1924 PFVELLGNCLSSNYEDILSASLTCLTPLVRLPLPSLTSQADRIKVTLLDIAQSSVNSSSP 1983
Query: 224 XXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
++QLH+LI+FPLFVDL +NPSF+A
Sbjct: 1984 LMQSCLRLLIALLWSTNVTLSSEQLHLLIEFPLFVDLERNPSFIA 2028
>gb|EXC21920.1| hypothetical protein L484_011085 [Morus notabilis]
Length = 2341
Score = 76.6 bits (187), Expect = 3e-12
Identities = 43/105 (40%), Positives = 54/105 (51%)
Frame = +2
Query: 44 PFVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQ 223
PFV LLG CL+SKYE V+ AA + DKIK +L IAQ +VN S+
Sbjct: 1681 PFVALLGSCLNSKYEEVVSAALRCLIPLVRLPLPSIGFQVDKIKRALFDIAQSTVNTSSS 1740
Query: 224 XXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
+++LH+LIQ PLFVDL +NPSFVA
Sbjct: 1741 LMQSCLQLLTVLLGGTKATLSSEELHLLIQLPLFVDLERNPSFVA 1785
>ref|XP_006489856.1| PREDICTED: small subunit processome component 20 homolog isoform X3
[Citrus sinensis]
Length = 2306
Score = 75.1 bits (183), Expect = 9e-12
Identities = 44/104 (42%), Positives = 56/104 (53%)
Frame = +2
Query: 47 FVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQX 226
FV +LG CLSSKYE+++ A+ +S+ADK+K +LL IA GS +S+
Sbjct: 1657 FVTILGNCLSSKYEDILSASLRCLAPLISLPLPSLKSQADKMKATLLDIAHGSATSSSLL 1716
Query: 227 XXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
ADQLH LIQFPLFVDL +NPS VA
Sbjct: 1717 MQSCLNLLTKLLRTTDITLSADQLHELIQFPLFVDLERNPSDVA 1760
>ref|XP_006489855.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Citrus sinensis]
Length = 2702
Score = 75.1 bits (183), Expect = 9e-12
Identities = 44/104 (42%), Positives = 56/104 (53%)
Frame = +2
Query: 47 FVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQX 226
FV +LG CLSSKYE+++ A+ +S+ADK+K +LL IA GS +S+
Sbjct: 2053 FVTILGNCLSSKYEDILSASLRCLAPLISLPLPSLKSQADKMKATLLDIAHGSATSSSLL 2112
Query: 227 XXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
ADQLH LIQFPLFVDL +NPS VA
Sbjct: 2113 MQSCLNLLTKLLRTTDITLSADQLHELIQFPLFVDLERNPSDVA 2156
>ref|XP_006489854.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Citrus sinensis]
Length = 2703
Score = 75.1 bits (183), Expect = 9e-12
Identities = 44/104 (42%), Positives = 56/104 (53%)
Frame = +2
Query: 47 FVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQX 226
FV +LG CLSSKYE+++ A+ +S+ADK+K +LL IA GS +S+
Sbjct: 2054 FVTILGNCLSSKYEDILSASLRCLAPLISLPLPSLKSQADKMKATLLDIAHGSATSSSLL 2113
Query: 227 XXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
ADQLH LIQFPLFVDL +NPS VA
Sbjct: 2114 MQSCLNLLTKLLRTTDITLSADQLHELIQFPLFVDLERNPSDVA 2157
>ref|XP_002869353.1| hypothetical protein ARALYDRAFT_353720 [Arabidopsis lyrata subsp.
lyrata] gi|297315189|gb|EFH45612.1| hypothetical protein
ARALYDRAFT_353720 [Arabidopsis lyrata subsp. lyrata]
Length = 2855
Score = 69.7 bits (169), Expect = 4e-10
Identities = 39/105 (37%), Positives = 56/105 (53%)
Frame = +2
Query: 44 PFVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQ 223
PFV LL CLSSKYE+++ ++ SEAD++K +LL IAQ +V++S+
Sbjct: 1971 PFVKLLAGCLSSKYEDIVSSSLRCFTSLVKFPLPSLTSEADELKTALLTIAQSAVSSSSP 2030
Query: 224 XXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
++QL MLIQFP+F+DL + SFVA
Sbjct: 2031 LVQSCLKLLTTLLDNKNITLSSEQLKMLIQFPIFIDLESDSSFVA 2075
>ref|XP_004247966.1| PREDICTED: small subunit processome component 20 homolog [Solanum
lycopersicum]
Length = 2660
Score = 67.8 bits (164), Expect = 1e-09
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2
Query: 152 QSEADKIKNSLLVIAQGSVNASNQXXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVD 331
+S+A+KIK+SLL IAQGSV +SN DQLHMLIQFPLFVD
Sbjct: 2044 ESQAEKIKHSLLNIAQGSVTSSNPLLESCVKLLTVLLRSTKITLSTDQLHMLIQFPLFVD 2103
Query: 332 LAKNPSFVA 358
L +NPSFVA
Sbjct: 2104 LERNPSFVA 2112
>ref|XP_004492742.1| PREDICTED: small subunit processome component 20 homolog [Cicer
arietinum]
Length = 2700
Score = 65.9 bits (159), Expect = 6e-09
Identities = 38/105 (36%), Positives = 53/105 (50%)
Frame = +2
Query: 44 PFVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQ 223
PFV LL L SKYE+++ A+ Q A++IK+++ IAQ SVNAS+
Sbjct: 2050 PFVKLLSDGLCSKYEDILSASLGCLTVLVKLPLPSLQLHAERIKSAVFDIAQSSVNASSP 2109
Query: 224 XXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
DQ+H+LIQ P+F+DL +NPS VA
Sbjct: 2110 LMQSCLTLLTMLLRNTEISLTPDQIHLLIQLPIFLDLERNPSLVA 2154
>gb|ESW35654.1| hypothetical protein PHAVU_001G253000g, partial [Phaseolus vulgaris]
Length = 2722
Score = 65.1 bits (157), Expect = 9e-09
Identities = 39/105 (37%), Positives = 54/105 (51%)
Frame = +2
Query: 44 PFVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQ 223
PFV LL LSSKYE+++ + Q A++IK+SLL IAQGSV++S+
Sbjct: 2073 PFVKLLCDGLSSKYEDILSTSLGCLAILVRLPLPSLQQHAERIKSSLLDIAQGSVSSSSP 2132
Query: 224 XXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
+DQ++ LI P+F+DL KNPS VA
Sbjct: 2133 LMQSCLTLLSVLLRNTKISLASDQINSLIHLPIFLDLEKNPSLVA 2177
>gb|EMT18035.1| Small subunit processome component 20-like protein [Aegilops
tauschii]
Length = 2673
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/105 (36%), Positives = 51/105 (48%)
Frame = +2
Query: 44 PFVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQ 223
PFV LLG+CLSSKYE+V+ + A+ IK+ L+ IAQ + N++
Sbjct: 2025 PFVNLLGKCLSSKYESVLSVTFRCLAMLVKLPLPSLKDNANSIKSVLMEIAQRTGNSNGH 2084
Query: 224 XXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
DQL ML++FP+FVDL NPS VA
Sbjct: 2085 LVTSCLKLLAHLLRGFRISLSDDQLQMLVRFPIFVDLQTNPSPVA 2129
>gb|EMS50081.1| Small subunit processome component 20-like protein [Triticum urartu]
Length = 2665
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/105 (36%), Positives = 51/105 (48%)
Frame = +2
Query: 44 PFVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQ 223
PFV LLG+CLSSKYE+V+ + A+ IK+ L+ IAQ + N++
Sbjct: 2017 PFVNLLGKCLSSKYESVLSVTFRCLAMLVKLPLPSLKDNANSIKSVLMEIAQRTGNSNGH 2076
Query: 224 XXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
DQL ML++FP+FVDL NPS VA
Sbjct: 2077 LVTSCLKLLAHLLRGFRISLSDDQLQMLVRFPIFVDLQTNPSPVA 2121
>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula]
gi|355490698|gb|AES71901.1| Small subunit processome
component-like protein [Medicago truncatula]
Length = 2733
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/105 (34%), Positives = 54/105 (51%)
Frame = +2
Query: 44 PFVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQ 223
PFV L L SKYE+++ A+ Q A++IK+++L IAQ SVN+S+
Sbjct: 2060 PFVKLFSDGLCSKYEDILSASLGCLTVLVKLPLPSLQEHAERIKSAVLDIAQSSVNSSSP 2119
Query: 224 XXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
++Q+H+LIQ P+F+DL +NPS VA
Sbjct: 2120 LMQSCLTFLTMLLRKTKISLTSNQIHILIQLPIFLDLERNPSLVA 2164
>ref|XP_006646040.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Oryza
brachyantha]
Length = 1825
Score = 62.4 bits (150), Expect = 6e-08
Identities = 38/105 (36%), Positives = 50/105 (47%)
Frame = +2
Query: 44 PFVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQ 223
PFV LLG+CLSSKYE+VI + + A IKN L+ IAQ + N++
Sbjct: 1178 PFVNLLGECLSSKYESVISISFRCLALLVKLPLPSLKDNASIIKNVLMDIAQRAGNSNGH 1237
Query: 224 XXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
DQL +++ FP+FVDL NPS VA
Sbjct: 1238 LVTSCLKLLADLLRGFKISLSDDQLQIIVHFPIFVDLQTNPSPVA 1282
>ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subunit processome component 20
homolog, partial [Cucumis sativus]
Length = 2538
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/69 (47%), Positives = 40/69 (57%)
Frame = +2
Query: 152 QSEADKIKNSLLVIAQGSVNASNQXXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVD 331
+S+ADKIK +L+IAQ SV+ N DQLH+LIQFPLFVD
Sbjct: 1924 KSQADKIKGVVLLIAQSSVDPRNPLVESCLRLLTVLLRNEKVTLSTDQLHLLIQFPLFVD 1983
Query: 332 LAKNPSFVA 358
+ KNPSFVA
Sbjct: 1984 IDKNPSFVA 1992
>ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis
sativus]
Length = 2696
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/69 (47%), Positives = 40/69 (57%)
Frame = +2
Query: 152 QSEADKIKNSLLVIAQGSVNASNQXXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVD 331
+S+ADKIK +L+IAQ SV+ N DQLH+LIQFPLFVD
Sbjct: 2082 KSQADKIKGVVLLIAQSSVDPRNPLVESCLRLLTVLLRNEKVTLSTDQLHLLIQFPLFVD 2141
Query: 332 LAKNPSFVA 358
+ KNPSFVA
Sbjct: 2142 IDKNPSFVA 2150
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +2
Query: 152 QSEADKIKNSLLVIAQGSVNASNQXXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVD 331
+++AD IK++LL IAQ SVNA++ DQLH+LIQFPLFVD
Sbjct: 2016 ETQADGIKSALLDIAQSSVNANSPLMQSCLSLLTALLRSTKITLSTDQLHLLIQFPLFVD 2075
Query: 332 LAKNPSFVA 358
L +NPSF+A
Sbjct: 2076 LERNPSFIA 2084
>ref|XP_004305310.1| PREDICTED: small subunit processome component 20 homolog [Fragaria
vesca subsp. vesca]
Length = 2681
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/105 (32%), Positives = 49/105 (46%)
Frame = +2
Query: 44 PFVGLLGQCLSSKYENVIIAAXXXXXXXXXXXXXXXQSEADKIKNSLLVIAQGSVNASNQ 223
PFV LLG CL+SKYE+V+ A + +AD +K L IA + +
Sbjct: 2028 PFVTLLGMCLTSKYEDVLSATLRCLTSLVRFNLPAIEDQADNLKAVLFDIAHSWLKNGSS 2087
Query: 224 XXXXXXXXXXXXXXXXXXXXXADQLHMLIQFPLFVDLAKNPSFVA 358
++ LH+LIQ P+FVD+ ++PSFVA
Sbjct: 2088 LMESCLRLLTVLLRGNKITLSSEHLHLLIQLPVFVDIERDPSFVA 2132