BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00028291
         (774 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]   238   2e-60
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   235   1e-59
emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]   231   2e-58
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   230   5e-58
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]                228   1e-57
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   226   7e-57
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   226   9e-57
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   226   9e-57
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]   225   1e-56
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   225   1e-56
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   224   2e-56
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   224   2e-56
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]   224   3e-56
emb|CAN73151.1| hypothetical protein VITISV_029990 [Vitis vinifera]   224   3e-56
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   224   3e-56
gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Ho...   223   4e-56
gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subc...   223   4e-56
gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryz...   223   4e-56
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  223   6e-56
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]   223   7e-56

>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score =  238 bits (607), Expect = 2e-60
 Identities = 129/255 (50%), Positives = 158/255 (61%)
 Frame = -2

Query: 773  SVSDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEVHYFLG 594
            S SD+SLF  K  G             +TG+N   V+ +I  L  +FALK +G V  FLG
Sbjct: 664  STSDTSLFIYKHNGNFLLLLVYVDDLLITGNNVPLVQTLIQDLQNRFALKDLGLVKDFLG 723

Query: 593  LEASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLADPTTYRS 414
             EA RT  G + L Q KY  DLL KTK  + KP  TPM+  LKL        +DPT YRS
Sbjct: 724  FEALRTTTG-LHLTQSKYTTDLLIKTKMHSAKPVPTPMSAALKLHAASGPAFSDPTLYRS 782

Query: 413  TLGALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPSQRF 234
            T+GALQYLT TRPDI+FAVNKLSQ+L  PT  HW A K +LRYLKG  + GL F P+   
Sbjct: 783  TIGALQYLTYTRPDIAFAVNKLSQYLQQPTELHWTACKRVLRYLKGIVHRGLHFTPASSL 842

Query: 233  LLAGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASATTD 54
             L  ++DADWAS++DDRRST G+CV+LG+NL  W           S ++EYRALA A+ +
Sbjct: 843  HLQVYTDADWASSIDDRRSTTGYCVFLGTNLFTWSSRKQPVVARSSTKAEYRALAHASXE 902

Query: 53   VIWLHSLFHELGIKI 9
            V WL SLF ELGI +
Sbjct: 903  VAWLRSLFSELGISL 917


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  235 bits (599), Expect = 1e-59
 Identities = 120/253 (47%), Positives = 158/253 (62%)
 Frame = -2

Query: 767  SDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEVHYFLGLE 588
            SD SLF +                 + G ++AA+  +I+ L  +F+LK +GEVHYFLG++
Sbjct: 1111 SDQSLFLRFTPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLGIQ 1170

Query: 587  ASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLADPTTYRSTL 408
             S T +G + L Q KY+RDLL KTK   CKP  TP+   LKL +GD   + D   YRST+
Sbjct: 1171 VSHTNNG-LHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVGDGDPVEDLHGYRSTV 1229

Query: 407  GALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPSQRFLL 228
            GALQY+T+TRP++SF+VNK+ QF+ +PT  HW+ VK +LRYL+GT   GL  K S    L
Sbjct: 1230 GALQYVTITRPELSFSVNKVCQFMQNPTEEHWKVVKRILRYLQGTLQHGLHLKKSSNLDL 1289

Query: 227  AGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASATTDVI 48
             GF DADWAS+LDDRRST GHCV+LG NL+ W           S E EYR+LA    ++ 
Sbjct: 1290 IGFCDADWASDLDDRRSTSGHCVFLGPNLISWQSKKQHIVSRSSIEIEYRSLAGLVAEIT 1349

Query: 47   WLHSLFHELGIKI 9
            WL SL  EL + +
Sbjct: 1350 WLRSLLSELQLPL 1362


>emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]
          Length = 1099

 Score =  231 bits (589), Expect = 2e-58
 Identities = 127/256 (49%), Positives = 159/256 (62%)
 Frame = -2

Query: 773  SVSDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEVHYFLG 594
            S+S++S F     G             + GD+SA +  VI  L  +FALKT+G + YFL 
Sbjct: 746  SISNNSXFXSXKNGHLVLVLAYVDDILIIGDSSALIHSVIQALTSRFALKTLGSISYFLR 805

Query: 593  LEASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLADPTTYRS 414
             EA R   G ++L Q KY+ DLL K      KP+ST MA+  KLAL D+A   + T  RS
Sbjct: 806  FEAFRDNLG-LYLNQVKYIFDLLXKKNMVHAKPSSTLMALGQKLALEDNAHFPNVTLDRS 864

Query: 413  TLGALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPSQRF 234
            T+GALQYLTLTR DISF+VNKLSQFL  PT +HW A K LLRY+ GT  LGL F P+ RF
Sbjct: 865  TIGALQYLTLTRLDISFSVNKLSQFLKAPTQHHWSACKRLLRYVSGTRTLGLSFXPTTRF 924

Query: 233  LLAGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASATTD 54
             L GFSDADWA N+DDRR T G+ V+LG NL+ W           + ES+YRALAS T +
Sbjct: 925  TLEGFSDADWACNVDDRRXTTGYXVFLGGNLVTWSSRKQQVIARSNTESKYRALASVTME 984

Query: 53   VIWLHSLFHELGIKIE 6
            +IW+ SL  EL   ++
Sbjct: 985  LIWIKSLLDELQFPLQ 1000


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  230 bits (586), Expect = 5e-58
 Identities = 116/253 (45%), Positives = 161/253 (63%)
 Frame = -2

Query: 767  SDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEVHYFLGLE 588
            SD SLF +    +            +TG +S  + ++IS L   F+LK +GE+ YFLG+E
Sbjct: 923  SDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGLFSLKDLGELSYFLGIE 982

Query: 587  ASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLADPTTYRSTL 408
              +TA G + L Q KY++DLL KTK +  K   TPM   LKL+ G    + +   YRS +
Sbjct: 983  VKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPMLSGLKLSAGMGDPIDNVFEYRSVV 1042

Query: 407  GALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPSQRFLL 228
            GALQY+T+TRP+I+F+VNK+ QF+  P   HW+AVK +LRYL GT++LG+  KPS+   L
Sbjct: 1043 GALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNGTTDLGIVLKPSETMNL 1102

Query: 227  AGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASATTDVI 48
             GF DADW S++DDRRST GHCV+LG +L+ W           S E+EYR+LAS T++++
Sbjct: 1103 VGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSKKQHTTSRSSTEAEYRSLASLTSEML 1162

Query: 47   WLHSLFHELGIKI 9
            WL SL  EL  K+
Sbjct: 1163 WLQSLLSELQTKM 1175


>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
          Length = 1825

 Score =  228 bits (582), Expect = 1e-57
 Identities = 120/257 (46%), Positives = 161/257 (62%), Gaps = 2/257 (0%)
 Frame = -2

Query: 773  SVSDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEVHYFLG 594
            S +D+SLFF                  +      A   ++  L + FALK +GE+HYFLG
Sbjct: 996  SKADTSLFFYSKGDVIIFVLIYVDDIIVASSMPDATTALLQDLNKSFALKDLGELHYFLG 1055

Query: 593  LEASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLA--DPTTY 420
            +EA++   G I L Q KY++DLL +   + CKP STP++   KL++    VL   D T Y
Sbjct: 1056 IEATKVCDG-ILLSQEKYVKDLLKRINMDKCKPVSTPLSPTEKLSIHQGDVLGPNDATNY 1114

Query: 419  RSTLGALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPSQ 240
            RS +GALQYLTLTRPDISF+VNK+ Q+LH PT  HW AVK +LRYL+ TS LGL+ + S 
Sbjct: 1115 RSIVGALQYLTLTRPDISFSVNKVCQYLHSPTTVHWAAVKRILRYLQQTSGLGLKIRKSS 1174

Query: 239  RFLLAGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASAT 60
              L++GFSDADWA  LDDRRSTGG  VYLG NL+ W           S E+EY+ALA+ T
Sbjct: 1175 SLLVSGFSDADWAGCLDDRRSTGGFAVYLGPNLVSWSARKQPTVSRSSTEAEYKALANVT 1234

Query: 59   TDVIWLHSLFHELGIKI 9
             +++W+ +L  E+ I++
Sbjct: 1235 AEIMWVQTLLKEIKIEV 1251


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score =  226 bits (576), Expect = 7e-57
 Identities = 118/255 (46%), Positives = 160/255 (62%), Gaps = 2/255 (0%)
 Frame = -2

Query: 773  SVSDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEVHYFLG 594
            S +D+SLFF    G             +      AV  ++  L + FALK +G++HYFLG
Sbjct: 920  SKADTSLFFYNKGGLIIFVLVYVDDIIVASSRQDAVPALLKDLQKDFALKDLGDLHYFLG 979

Query: 593  LEASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLA--DPTTY 420
            +E ++ + G I L Q KY+ DLL +     CKP STP++ + KL L +  +L   D + Y
Sbjct: 980  IEVNKASSG-IVLTQEKYVTDLLRRVGMTDCKPVSTPLSTSEKLTLHEGDLLGPNDASNY 1038

Query: 419  RSTLGALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPSQ 240
            RS +GALQYLTLTRPDI F VNK+ QFLH PTI HW A+K +LRYLK  + LGL+   S+
Sbjct: 1039 RSVVGALQYLTLTRPDIYFPVNKVCQFLHAPTIVHWAAMKRILRYLKQCTKLGLKISKSK 1098

Query: 239  RFLLAGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASAT 60
              L++G+SDADWA N+DDRRSTGG  V+LG NL+ W           S ESEY+ALA+AT
Sbjct: 1099 SMLVSGYSDADWAGNIDDRRSTGGFAVFLGDNLVSWNAKKQATVPRSSTESEYKALANAT 1158

Query: 59   TDVIWLHSLFHELGI 15
             +++W+ +L  EL +
Sbjct: 1159 AEIMWIQTLLEELSV 1173


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  226 bits (575), Expect = 9e-57
 Identities = 117/257 (45%), Positives = 162/257 (63%), Gaps = 2/257 (0%)
 Frame = -2

Query: 773  SVSDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEVHYFLG 594
            S +D SLF                   +TG +  A+++V++ L   FA+K +G++HYFLG
Sbjct: 1097 SKADVSLFIYNAHSTAIYILVYVDDIIITGSSPHAIDNVLAKLKDDFAIKDLGDLHYFLG 1156

Query: 593  LEASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLA--DPTTY 420
            +E  R   G + L Q KY RDLL +   E CKP  TP+A + KL+     +L+  + T Y
Sbjct: 1157 IEVHRKGDG-LLLCQEKYARDLLKRVGMECCKPVHTPVATSEKLSASAGTLLSPEETTKY 1215

Query: 419  RSTLGALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPSQ 240
            RS +GALQYLTLTRPD+S+A+N++ QFLH PT  HW AVK +LR ++ T  LGL  +PS 
Sbjct: 1216 RSVVGALQYLTLTRPDLSYAINRVCQFLHAPTDLHWTAVKRILRNIQHTIGLGLTIRPSL 1275

Query: 239  RFLLAGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASAT 60
              +L+ FSDADWA   DDR+STGG+ ++LG NL+ W           S E+EY+A+A+AT
Sbjct: 1276 SLMLSAFSDADWAGCPDDRKSTGGYALFLGPNLISWNSKKQSTVSRSSTEAEYKAMANAT 1335

Query: 59   TDVIWLHSLFHELGIKI 9
             +VIWL SL HELGI++
Sbjct: 1336 AEVIWLQSLLHELGIRL 1352


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  226 bits (575), Expect = 9e-57
 Identities = 122/256 (47%), Positives = 162/256 (63%), Gaps = 2/256 (0%)
 Frame = -2

Query: 773  SVSDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEVHYFLG 594
            S +D+SLFF                  +   +  A   ++  L  +FALK +GE+HYFLG
Sbjct: 839  SKADTSLFFLNKGDITMFVLVYVDDIIVASSSEKATAALLQNLKGEFALKDLGELHYFLG 898

Query: 593  LEASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLA--DPTTY 420
            +E S+  +G I L Q KY  DLL K     CKP +TP++V+ KL+L + ++L   D + Y
Sbjct: 899  IEVSKVQNG-IVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHY 957

Query: 419  RSTLGALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPSQ 240
            RS +GALQYLTLTRPDI+F+VNK+ QFLH PT  HW AVK +LRYLK  + LGLE   S 
Sbjct: 958  RSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSG 1017

Query: 239  RFLLAGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASAT 60
              L++GFSDADWA  LDDRRSTGG  ++LGSNL+ W           S ESEY+A+A+AT
Sbjct: 1018 STLVSGFSDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANAT 1077

Query: 59   TDVIWLHSLFHELGIK 12
             +++W+ +L  EL IK
Sbjct: 1078 AEIMWVQTLLAELEIK 1093


>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
          Length = 1272

 Score =  225 bits (573), Expect = 1e-56
 Identities = 117/224 (52%), Positives = 147/224 (65%), Gaps = 1/224 (0%)
 Frame = -2

Query: 689  TGDNSAAVEDVISLLGQKFALKTMGEVHYFLGLEASRTAHGSIF-LKQGKYLRDLLAKTK 513
            TG N   V   IS L  KFAL+ +G + YFLG++A +   GS+  L Q KY+ DLL +T+
Sbjct: 928  TGSNPTLVSHFISYLSTKFALRDLGPLSYFLGIQAQQL--GSVLHLNQHKYIADLLKRTQ 985

Query: 512  FETCKPTSTPMAVNLKLALGDSAVLADPTTYRSTLGALQYLTLTRPDISFAVNKLSQFLH 333
             ET KP  TP  +   L+  D   L+DP  YR T+GALQY+TLTRPDI+FAVNK  QF+ 
Sbjct: 986  METSKPAPTPGRLGRTLSQSDGVSLSDPLEYRRTVGALQYVTLTRPDIAFAVNKACQFMA 1045

Query: 332  HPTINHWQAVKHLLRYLKGTSNLGLEFKPSQRFLLAGFSDADWASNLDDRRSTGGHCVYL 153
             P+  HW AVK +LRYLKGT +LGL F+P+    L G+SDADWAS  DDRRST G+CV+L
Sbjct: 1046 KPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYCVFL 1105

Query: 152  GSNLLIWXXXXXXXXXXXSAESEYRALASATTDVIWLHSLFHEL 21
            GSNL+ W           SAESEYR L S T +++W+ SL  EL
Sbjct: 1106 GSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQEL 1149


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  225 bits (573), Expect = 1e-56
 Identities = 122/256 (47%), Positives = 162/256 (63%), Gaps = 2/256 (0%)
 Frame = -2

Query: 773  SVSDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEVHYFLG 594
            S +D+SLFF                  +   +  A   ++  L  +FALK +GE+HYFLG
Sbjct: 1110 SKADTSLFFLNKGDITMFVLVYVDDIIVASSSERATAALLQDLKGEFALKDLGELHYFLG 1169

Query: 593  LEASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLA--DPTTY 420
            +E S+  +G I L Q KY  DLL K     CKP +TP++V+ KL+L + ++L   D + Y
Sbjct: 1170 IEVSKVQNG-IVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHY 1228

Query: 419  RSTLGALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPSQ 240
            RS +GALQYLTLTRPDI+F+VNK+ QFLH PT  HW AVK +LRYLK  + LGLE   S 
Sbjct: 1229 RSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSG 1288

Query: 239  RFLLAGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASAT 60
              L++GFSDADWA  LDDRRSTGG  ++LGSNL+ W           S ESEY+A+A+AT
Sbjct: 1289 STLVSGFSDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSIESEYKAIANAT 1348

Query: 59   TDVIWLHSLFHELGIK 12
             +++W+ +L  EL IK
Sbjct: 1349 AEIMWVQTLLAELEIK 1364


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  224 bits (572), Expect = 2e-56
 Identities = 122/256 (47%), Positives = 161/256 (62%), Gaps = 2/256 (0%)
 Frame = -2

Query: 773  SVSDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEVHYFLG 594
            S  D+SLFF                  +   +  A   ++  L  +FALK +GE+HYFLG
Sbjct: 1117 SKPDTSLFFLNKGDITMFVLVYVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLG 1176

Query: 593  LEASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLA--DPTTY 420
            +E S+  +G I L Q KY  DLL K     CKP +TP++V+ KL+L + ++L   D + Y
Sbjct: 1177 IEVSKVQNG-IVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHY 1235

Query: 419  RSTLGALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPSQ 240
            RS +GALQYLTLTRPDI+F+VNK+ QFLH PT  HW AVK +LRYLK  + LGLE   S 
Sbjct: 1236 RSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSG 1295

Query: 239  RFLLAGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASAT 60
              L++GFSDADWA  LDDRRSTGG  ++LGSNL+ W           S ESEY+A+A+AT
Sbjct: 1296 STLVSGFSDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANAT 1355

Query: 59   TDVIWLHSLFHELGIK 12
             +++W+ +L  EL IK
Sbjct: 1356 AEIMWVQTLLAELEIK 1371


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  224 bits (572), Expect = 2e-56
 Identities = 118/259 (45%), Positives = 163/259 (62%), Gaps = 2/259 (0%)
 Frame = -2

Query: 773  SVSDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEVHYFLG 594
            S +D+SLFF                  +T     AV  ++  L ++FALK +G++HYFLG
Sbjct: 911  SKADTSLFFYNKGDLIIFVLIYVDDIIVTSSRQEAVPALLRDLQKEFALKDLGDLHYFLG 970

Query: 593  LEASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLA--DPTTY 420
            +E ++ + G I L Q KY+ DLL +     CKP STP++ + KL++ +   L   D T Y
Sbjct: 971  IEVTKVS-GGIVLTQDKYVNDLLRRVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDATHY 1029

Query: 419  RSTLGALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPSQ 240
            RS +GALQYLTLTRPDI+F VNK+ QFLH PT +HW AVK +LRYLK  + LGL+   S+
Sbjct: 1030 RSVVGALQYLTLTRPDIAFPVNKVCQFLHAPTTHHWAAVKRILRYLKQCTRLGLKLSKSR 1089

Query: 239  RFLLAGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASAT 60
              L++ +SDADWA +LDDRRSTGG  V+LG NL+ W           S ESEY+ALA+AT
Sbjct: 1090 SMLVSAYSDADWAGSLDDRRSTGGFAVFLGDNLVSWSARKQATVSRSSTESEYKALANAT 1149

Query: 59   TDVIWLHSLFHELGIKIES 3
             +++W+ +L  EL ++  S
Sbjct: 1150 AEIMWVQTLLAELQVESPS 1168


>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
          Length = 1334

 Score =  224 bits (570), Expect = 3e-56
 Identities = 117/224 (52%), Positives = 148/224 (66%), Gaps = 1/224 (0%)
 Frame = -2

Query: 689  TGDNSAAVEDVISLLGQKFALKTMGEVHYFLGLEASRTAHGSIF-LKQGKYLRDLLAKTK 513
            TG N   V   IS L  KFAL+ +G + YFLG++A +   GS+  L Q KY+ DLL +T+
Sbjct: 1059 TGSNPMLVSHFISYLRTKFALRDLGPLSYFLGIQAQQL--GSVLHLNQHKYIADLLNRTQ 1116

Query: 512  FETCKPTSTPMAVNLKLALGDSAVLADPTTYRSTLGALQYLTLTRPDISFAVNKLSQFLH 333
             ET KP  TP  +   L+  D   L+DP+ YR T+GALQY+TLTRPDI+FAVNK  QF+ 
Sbjct: 1117 METSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMA 1176

Query: 332  HPTINHWQAVKHLLRYLKGTSNLGLEFKPSQRFLLAGFSDADWASNLDDRRSTGGHCVYL 153
             P+  HW AVK +LRYLKGT +LGL F+P+    L G+SDADWAS  DDRRST G+CV+L
Sbjct: 1177 KPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYCVFL 1236

Query: 152  GSNLLIWXXXXXXXXXXXSAESEYRALASATTDVIWLHSLFHEL 21
            GSNL+ W           SAESEYR L S T +++W+ SL  EL
Sbjct: 1237 GSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQEL 1280


>emb|CAN73151.1| hypothetical protein VITISV_029990 [Vitis vinifera]
          Length = 437

 Score =  224 bits (570), Expect = 3e-56
 Identities = 114/206 (55%), Positives = 139/206 (67%)
 Frame = -2

Query: 638 KFALKTMGEVHYFLGLEASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLA 459
           K  LKT+G + YFLG EA R + G ++L Q KY+ +LL K      KP+STPM +  KLA
Sbjct: 233 KTELKTLGSISYFLGFEAFRDSSG-LYLNQAKYISNLLVKKNMVHVKPSSTPMTIGKKLA 291

Query: 458 LGDSAVLADPTTYRSTLGALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLK 279
           L DSA   + T YRST+G LQYLTLTR DISF+VNKLSQFL  PT +HW A K LLRY+ 
Sbjct: 292 LEDSAPFPNVTLYRSTIGVLQYLTLTRSDISFSVNKLSQFLKAPTQHHWSACKRLLRYVS 351

Query: 278 GTSNLGLEFKPSQRFLLAGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXX 99
           GT  LGL F+P+ RF L GF DADW  N+D+RRST G+CV+LG NL+ W           
Sbjct: 352 GTHTLGLSFRPTARFTLEGFLDADWVCNVDERRSTTGYCVFLGGNLVTWSSCKQQVVARS 411

Query: 98  SAESEYRALASATTDVIWLHSLFHEL 21
           + ESEY ALAS T ++IW+ SL  EL
Sbjct: 412 NTESEYWALASVTMELIWIKSLLDEL 437


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  224 bits (570), Expect = 3e-56
 Identities = 117/224 (52%), Positives = 148/224 (66%), Gaps = 1/224 (0%)
 Frame = -2

Query: 689  TGDNSAAVEDVISLLGQKFALKTMGEVHYFLGLEASRTAHGSIF-LKQGKYLRDLLAKTK 513
            TG N   V   IS L  KFAL+ +G + YFLG++A +   GS+  L Q KY+ DLL +T+
Sbjct: 1059 TGSNPMLVSHFISYLRTKFALRDLGPLSYFLGIQAQQL--GSVLHLNQHKYIADLLNRTQ 1116

Query: 512  FETCKPTSTPMAVNLKLALGDSAVLADPTTYRSTLGALQYLTLTRPDISFAVNKLSQFLH 333
             ET KP  TP  +   L+  D   L+DP+ YR T+GALQY+TLTRPDI+FAVNK  QF+ 
Sbjct: 1117 METSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMA 1176

Query: 332  HPTINHWQAVKHLLRYLKGTSNLGLEFKPSQRFLLAGFSDADWASNLDDRRSTGGHCVYL 153
             P+  HW AVK +LRYLKGT +LGL F+P+    L G+SDADWAS  DDRRST G+CV+L
Sbjct: 1177 KPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYCVFL 1236

Query: 152  GSNLLIWXXXXXXXXXXXSAESEYRALASATTDVIWLHSLFHEL 21
            GSNL+ W           SAESEYR L S T +++W+ SL  EL
Sbjct: 1237 GSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQEL 1280


>gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
            sativa Japonica Group]
          Length = 1150

 Score =  223 bits (569), Expect = 4e-56
 Identities = 116/260 (44%), Positives = 164/260 (63%), Gaps = 3/260 (1%)
 Frame = -2

Query: 773  SVSDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEV-HYFL 597
            S +D+SLFF +                +   +  AV  ++  L   FALK +G++ +YFL
Sbjct: 727  SKADTSLFFYRKGSVTIFVLVYVDDITVASSSQDAVSSLLHNLKMDFALKDLGDLNYYFL 786

Query: 596  GLEASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLA--DPTT 423
            G+E  + + G + L Q KY  D+L +    TCKP  TP++ + KL++ + ++L   D T 
Sbjct: 787  GIEVKKISDGLV-LSQDKYTHDILKRIGMSTCKPAPTPLSTSEKLSVQEGSLLGPGDATN 845

Query: 422  YRSTLGALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPS 243
            YRS +GALQYLTLTRPDI+F++NK+ QFLH PT+ HW AVK ++RYL+GT  +GL+ + S
Sbjct: 846  YRSIVGALQYLTLTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKS 905

Query: 242  QRFLLAGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASA 63
            Q  L+  FSDADWA  +DDRRST G  V+LGSNL+ W           S E+EY+ALA+A
Sbjct: 906  QSMLVNAFSDADWAGCVDDRRSTSGFAVFLGSNLISWSVRKQATVSRSSTEAEYKALANA 965

Query: 62   TTDVIWLHSLFHELGIKIES 3
            T +VIW+ +L  ELGI+  S
Sbjct: 966  TAEVIWVQTLLKELGIQCPS 985


>gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  223 bits (569), Expect = 4e-56
 Identities = 116/260 (44%), Positives = 164/260 (63%), Gaps = 3/260 (1%)
 Frame = -2

Query: 773  SVSDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEV-HYFL 597
            S +D+SLFF +                +   +  AV  ++  L   FALK +G++ +YFL
Sbjct: 689  SKADTSLFFYRKGSVTIFVLVYVDDITVASSSQDAVSSLLHNLKMDFALKDLGDLNYYFL 748

Query: 596  GLEASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLA--DPTT 423
            G+E  + + G + L Q KY  D+L +    TCKP  TP++ + KL++ + ++L   D T 
Sbjct: 749  GIEVKKISDGLV-LSQDKYTHDILKRIGMSTCKPAPTPLSTSEKLSVQEGSLLGPGDATN 807

Query: 422  YRSTLGALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPS 243
            YRS +GALQYLTLTRPDI+F++NK+ QFLH PT+ HW AVK ++RYL+GT  +GL+ + S
Sbjct: 808  YRSIVGALQYLTLTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKS 867

Query: 242  QRFLLAGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASA 63
            Q  L+  FSDADWA  +DDRRST G  V+LGSNL+ W           S E+EY+ALA+A
Sbjct: 868  QSMLVNAFSDADWAGCVDDRRSTSGFAVFLGSNLISWSVRKQATVSRSSTEAEYKALANA 927

Query: 62   TTDVIWLHSLFHELGIKIES 3
            T +VIW+ +L  ELGI+  S
Sbjct: 928  TAEVIWVQTLLKELGIQCPS 947


>gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryza sativa Japonica Group]
          Length = 1139

 Score =  223 bits (569), Expect = 4e-56
 Identities = 116/260 (44%), Positives = 164/260 (63%), Gaps = 3/260 (1%)
 Frame = -2

Query: 773  SVSDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEV-HYFL 597
            S +D+SLFF +                +   +  AV  ++  L   FALK +G++ +YFL
Sbjct: 695  SKADTSLFFYRKGSVTIFVLVYVDDITVASSSQDAVSSLLHNLKMDFALKDLGDLNYYFL 754

Query: 596  GLEASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLA--DPTT 423
            G+E  + + G + L Q KY  D+L +    TCKP  TP++ + KL++ + ++L   D T 
Sbjct: 755  GIEVKKISDGLV-LSQDKYTHDILKRIGMSTCKPAPTPLSTSEKLSVQEGSLLGPGDATN 813

Query: 422  YRSTLGALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPS 243
            YRS +GALQYLTLTRPDI+F++NK+ QFLH PT+ HW AVK ++RYL+GT  +GL+ + S
Sbjct: 814  YRSIVGALQYLTLTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKS 873

Query: 242  QRFLLAGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASA 63
            Q  L+  FSDADWA  +DDRRST G  V+LGSNL+ W           S E+EY+ALA+A
Sbjct: 874  QSMLVNAFSDADWAGCVDDRRSTSGFAVFLGSNLISWSVRKQATVSRSSTEAEYKALANA 933

Query: 62   TTDVIWLHSLFHELGIKIES 3
            T +VIW+ +L  ELGI+  S
Sbjct: 934  TAEVIWVQTLLKELGIQCPS 953


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  223 bits (568), Expect = 6e-56
 Identities = 116/255 (45%), Positives = 160/255 (62%), Gaps = 2/255 (0%)
 Frame = -2

Query: 773  SVSDSSLFFKKDKGAXXXXXXXXXXXXLTGDNSAAVEDVISLLGQKFALKTMGEVHYFLG 594
            S +D+SLFF    G             +      A   ++  L ++FALK +G++HYFLG
Sbjct: 1100 SKADTSLFFLNKGGIIMFVLVYVDDIIIASSTEKATTALLKDLNKEFALKDLGDLHYFLG 1159

Query: 593  LEASRTAHGSIFLKQGKYLRDLLAKTKFETCKPTSTPMAVNLKLALGDSAVLA--DPTTY 420
            +E ++  +G I L Q KY  DLL +     CKP STP++V+ KL L + + L   D T Y
Sbjct: 1160 IEVTKVPNG-IVLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQY 1218

Query: 419  RSTLGALQYLTLTRPDISFAVNKLSQFLHHPTINHWQAVKHLLRYLKGTSNLGLEFKPSQ 240
            RS +GALQYLTLTRPDI+++VNK+ QFLH PT +HW AVK +LRYL   ++LGL    S 
Sbjct: 1219 RSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTDHWTAVKRILRYLNQCTSLGLNIHKSA 1278

Query: 239  RFLLAGFSDADWASNLDDRRSTGGHCVYLGSNLLIWXXXXXXXXXXXSAESEYRALASAT 60
              L+ G+SDADWA ++DDR+STGG  V+LGSNL+ W           S E+EY+A+A+ T
Sbjct: 1279 STLVHGYSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTT 1338

Query: 59   TDVIWLHSLFHELGI 15
             ++IW+ +L  ELGI
Sbjct: 1339 AELIWVQTLLRELGI 1353


>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
          Length = 773

 Score =  223 bits (567), Expect = 7e-56
 Identities = 116/224 (51%), Positives = 147/224 (65%), Gaps = 1/224 (0%)
 Frame = -2

Query: 689  TGDNSAAVEDVISLLGQKFALKTMGEVHYFLGLEASRTAHGSIF-LKQGKYLRDLLAKTK 513
            TG N   V   IS L  KFAL+ +G + YFLG++A +   GS+  L Q KY+ DLL +T+
Sbjct: 406  TGSNPTLVSHFISYLRTKFALRDLGPLSYFLGIQAQQL--GSVLHLNQHKYIADLLNRTQ 463

Query: 512  FETCKPTSTPMAVNLKLALGDSAVLADPTTYRSTLGALQYLTLTRPDISFAVNKLSQFLH 333
             ET KP  TP  +   L+  D   L+DP+ YR T+GALQY+TLTRPDI+FAVNK  QF+ 
Sbjct: 464  METSKPAPTPGRLGRTLSQSDGVSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMA 523

Query: 332  HPTINHWQAVKHLLRYLKGTSNLGLEFKPSQRFLLAGFSDADWASNLDDRRSTGGHCVYL 153
             P+  HW AVK +LRYLKGT +LGL F+P+      G+SDADWAS  DDRRST G+CV+L
Sbjct: 524  KPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMEXQGYSDADWASCPDDRRSTSGYCVFL 583

Query: 152  GSNLLIWXXXXXXXXXXXSAESEYRALASATTDVIWLHSLFHEL 21
            GSNL+ W           SAESEYR L S T +++W+ SL  EL
Sbjct: 584  GSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQEL 627