BLASTX nr result

ID: Rehmannia26_contig00028246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00028246
         (435 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633022.1| PREDICTED: dof zinc finger protein DOF1.4-li...    77   3e-12
gb|EOY28202.1| F-box family protein, putative [Theobroma cacao]        72   6e-11
ref|XP_006384038.1| hypothetical protein POPTR_0004s04620g, part...    70   3e-10
ref|XP_002305125.1| predicted protein [Populus trichocarpa]            65   1e-08
ref|XP_002329827.1| f-box family protein [Populus trichocarpa] g...    60   2e-07
ref|XP_006449371.1| hypothetical protein CICLE_v10015710mg [Citr...    59   5e-07
ref|XP_006467767.1| PREDICTED: dof zinc finger protein DOF1.4-li...    59   9e-07
emb|CBI30590.3| unnamed protein product [Vitis vinifera]               59   9e-07

>ref|XP_003633022.1| PREDICTED: dof zinc finger protein DOF1.4-like [Vitis vinifera]
          Length = 309

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 70/201 (34%), Positives = 96/201 (47%), Gaps = 60/201 (29%)
 Frame = +2

Query: 5   IDLTPNSNHIIN---------SPLNFPF----------SGMFDYHRAAQMNGLGVRFSSG 127
           IDL+ +SNH+           S LN PF            +  Y    Q+  LG+ FSSG
Sbjct: 99  IDLSASSNHVTPLFYGLPSNPSELNLPFPRFNSRASNEDTVSGYDLQPQLGALGLGFSSG 158

Query: 128 LMVSELR--DYENG---SKQIQDPV----------LFGSSNFAPTTSTLMSY-------- 238
           ++ ++ R  DY NG   +KQIQD V          +FGSS+ + TT T+ S         
Sbjct: 159 IIANDTRTDDYRNGFNPAKQIQDLVTSSSLLSNYSIFGSSS-STTTPTMASLINSSLQQQ 217

Query: 239 -------------NEYPGLMPYEDVEVHGVSNIG-KEVKRE-GENGFGLNN---PNQIEQ 364
                        N +  L+PYED+++ G +++  KEVK E G N    N+    NQIEQ
Sbjct: 218 KFMNGDLKESRGANHFQPLVPYEDLQISGNTSMAMKEVKSEHGHNTLEWNSVPCQNQIEQ 277

Query: 365 INDSTDSSLLWNTTNAGAWFD 427
           I  S+D SL WN T+ GAW D
Sbjct: 278 IG-SSDPSLYWNLTSLGAWSD 297


>gb|EOY28202.1| F-box family protein, putative [Theobroma cacao]
          Length = 360

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 73/210 (34%), Positives = 102/210 (48%), Gaps = 67/210 (31%)
 Frame = +2

Query: 5   IDLTPNSNHIIN----------SPLNFPF-------SGM---FDYHRAAQMNGLGVRFSS 124
           ID++ +S+H IN          S +N PF       SG+     Y    Q+N LG+ FSS
Sbjct: 142 IDVSSSSSHHINPLFYGLANNPSDMNLPFPRFNSRVSGVETVTGYDLQPQLNALGLGFSS 201

Query: 125 GLMVSEL--RDYENG-----SKQIQDPV-----------LFGSSNFAPTT---------S 223
           G++ S+    DY NG     +KQIQD V           +FGSS+ + TT         S
Sbjct: 202 GIVSSDTGDSDYRNGFNVNPTKQIQDVVTSNPLLSSYSNVFGSSSSSTTTTPTIASLLAS 261

Query: 224 TLMSY-------------NEYPGLMPYEDVEVHGVSNIG---KEVK-REGENGFGLNNP- 349
           TL  +             N +  L P++D+++ G S  G   K+VK  EG+N    N P 
Sbjct: 262 TLHQHKFMNGGVKNTQAPNPFQALAPFQDLQMTGNSENGLTMKDVKVEEGQNRMEWNLPC 321

Query: 350 -NQIEQINDSTDSSLLWNTTN-AGAWFDPS 433
            NQ+EQI  S D ++ WNTT+ AGAW DP+
Sbjct: 322 QNQLEQIGLS-DPAVYWNTTSVAGAWHDPT 350


>ref|XP_006384038.1| hypothetical protein POPTR_0004s04620g, partial [Populus
           trichocarpa] gi|550340325|gb|ERP61835.1| hypothetical
           protein POPTR_0004s04620g, partial [Populus trichocarpa]
          Length = 281

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 67/186 (36%), Positives = 95/186 (51%), Gaps = 45/186 (24%)
 Frame = +2

Query: 11  LTPNSNHIIN----------SPLNFPFSGMFDYHRAAQMNGLGVRFSSGLMVSELRDYEN 160
           ++P SNHI            S ++ PF G F+     Q+N L + FSSG+M +   +  N
Sbjct: 91  ISPTSNHINPLFYGLTSSNPSEMDLPFPGRFNSR--PQLNALALGFSSGIMSANDANGFN 148

Query: 161 GSKQIQDPV-----------LFGSS-----NFAPTTSTLM--SYNEY-----PGL----- 256
            +KQIQD V           LFGSS       +PT ++L+  S+N+      P L     
Sbjct: 149 PTKQIQDVVTSNSLLSSYSNLFGSSTTSTNTTSPTMASLLASSFNQQKSTRAPNLYQNLT 208

Query: 257 MPYEDVEVHGVSNIG---KEVKRE-GENGFGLNNP--NQIEQINDSTDSSLLWNTTNA-G 415
           +P+ED+++ G S  G   K VK E  +N    N P  NQIEQ+  S D S+ WNTTN+ G
Sbjct: 209 VPFEDLQMSGNSESGVGMKGVKIEHDQNRSNWNVPCQNQIEQVGFS-DPSMYWNTTNSVG 267

Query: 416 AWFDPS 433
           +W DP+
Sbjct: 268 SWHDPA 273


>ref|XP_002305125.1| predicted protein [Populus trichocarpa]
          Length = 248

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 63/174 (36%), Positives = 89/174 (51%), Gaps = 45/174 (25%)
 Frame = +2

Query: 47  LNFPFSGMFD---------YHRAA-QMNGLGVRFSSGLMVSELRDYENGSKQIQDPV--- 187
           ++ PF G F+         YH    Q+N L + FSSG+M +   +  N +KQIQD V   
Sbjct: 1   MDLPFPGRFNSRVYSAVSGYHDLQPQLNALALGFSSGIMSANDANGFNPTKQIQDVVTSN 60

Query: 188 --------LFGSS-----NFAPTTSTLM--SYNEY-----PGL-----MPYEDVEVHGVS 292
                   LFGSS       +PT ++L+  S+N+      P L     +P+ED+++ G S
Sbjct: 61  SLLSSYSNLFGSSTTSTNTTSPTMASLLASSFNQQKSTRAPNLYQNLTVPFEDLQMSGNS 120

Query: 293 NIG---KEVKRE-GENGFGLNNP--NQIEQINDSTDSSLLWNTTNA-GAWFDPS 433
             G   K VK E  +N    N P  NQIEQ+  S D S+ WNTTN+ G+W DP+
Sbjct: 121 ESGVGMKGVKIEHDQNRSNWNVPCQNQIEQVGFS-DPSMYWNTTNSVGSWHDPA 173


>ref|XP_002329827.1| f-box family protein [Populus trichocarpa]
           gi|566193878|ref|XP_006377384.1| hypothetical protein
           POPTR_0011s05450g [Populus trichocarpa]
           gi|550327673|gb|ERP55181.1| hypothetical protein
           POPTR_0011s05450g [Populus trichocarpa]
          Length = 322

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 61/184 (33%), Positives = 90/184 (48%), Gaps = 53/184 (28%)
 Frame = +2

Query: 41  SPLNFPFSGMFD---------YHRAA-QMNGLGVRFSSGLMVSELRDYENGSKQIQDPV- 187
           S +N PF G F+         YH    Q+N L + FSSG+M +   +  N +KQIQD V 
Sbjct: 132 SEMNLPFPGRFNPRMDSAVSGYHDLQPQLNALALGFSSGIMTTNDANGFNPTKQIQDVVT 191

Query: 188 ----------LFGSS-----NFAPTTSTLM--SYNEY----PGL--------------MP 262
                     LFGSS       +PT ++L+  S+N+      G+              +P
Sbjct: 192 SNSLLSSYSNLFGSSTTSTNTTSPTIASLLASSFNQQKFTNSGIKESTRAPNYFQSLTVP 251

Query: 263 YEDVEVHGVSNIG---KEVKRE-GENGFGLNNP--NQIEQINDSTDSSLLWNT-TNAGAW 421
           +++++++G S  G   K VK E  +N    N P  NQIEQ+  S D S+ WNT T+ G+W
Sbjct: 252 FKELQMNGNSESGIGMKGVKTEHNQNRLDWNVPCQNQIEQVGLS-DPSMYWNTNTSVGSW 310

Query: 422 FDPS 433
            DP+
Sbjct: 311 HDPA 314


>ref|XP_006449371.1| hypothetical protein CICLE_v10015710mg [Citrus clementina]
           gi|557551982|gb|ESR62611.1| hypothetical protein
           CICLE_v10015710mg [Citrus clementina]
          Length = 361

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 70/215 (32%), Positives = 97/215 (45%), Gaps = 72/215 (33%)
 Frame = +2

Query: 5   IDLTPNSNHIIN---------SPLNFPFSG-----------MFDYHRAAQMNGLGVRFSS 124
           I ++  SNHI           S +N PFS            +  Y    Q+N LG+ FSS
Sbjct: 138 IHISSTSNHINPLFFGLSTNPSDMNLPFSTFNSRVVSSLDTISGYDLQPQLNALGLGFSS 197

Query: 125 GLMVSELR----DYENG---SKQIQDPVL-----------FGSSNFAPTTSTLM------ 232
           GL++S       +Y NG   +KQIQ+ V            FGSS+ +PT ++L+      
Sbjct: 198 GLIMSNTDAGDCNYRNGFNPNKQIQEVVTSSNSLLSSYPTFGSSSSSPTIASLLASSLHQ 257

Query: 233 ---------SYNEYPG-----LMPYEDVEVHGVSN--------IG--KEVK-REGENGFG 337
                    S  E P      L  +ED+++   +N        IG  KEVK  EG++  G
Sbjct: 258 PKFMNGVVKSSTEAPNHFNNNLASFEDLQMTANNNNNNGEAARIGMMKEVKAEEGQSRMG 317

Query: 338 LNNP--NQIEQINDSTDSSLLWNTTNA-GAWFDPS 433
            N    NQ+EQI    D SL WN+T++ GAW DPS
Sbjct: 318 WNVECQNQMEQIG-LADPSLYWNSTSSVGAWHDPS 351


>ref|XP_006467767.1| PREDICTED: dof zinc finger protein DOF1.4-like [Citrus sinensis]
          Length = 361

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 68/215 (31%), Positives = 95/215 (44%), Gaps = 72/215 (33%)
 Frame = +2

Query: 5   IDLTPNSNHIIN---------SPLNFPFSG-----------MFDYHRAAQMNGLGVRFSS 124
           ID++  SNHI           S +N PFS            +  Y    Q+N LG+ FSS
Sbjct: 138 IDISSTSNHINPLFFGLSTNPSDMNLPFSTFNSRVVSSLDTISGYDLQPQLNALGLGFSS 197

Query: 125 GLMVSELR----DYENG---SKQIQDPVL-----------FGSSNFAPTTSTLM------ 232
           GL++S       +Y NG   +KQIQ+ V            FGSS+ +PT ++L+      
Sbjct: 198 GLIMSNTDVGDCNYRNGFNPNKQIQEVVTSSNSLLSSYPTFGSSSSSPTIASLLASSLHQ 257

Query: 233 ---------SYNEYPG-----LMPYEDVEVHGVSN----------IGKEVK-REGENGFG 337
                    S  E P      L  +ED+++   +N          + KEVK  EG+    
Sbjct: 258 PKFMNGVVKSSTEAPNHFNNNLASFEDLQMTANNNNNNGEAARTGMMKEVKAEEGQRRMD 317

Query: 338 LNNP--NQIEQINDSTDSSLLWNTTNA-GAWFDPS 433
            N    NQ+EQI    D SL WN+T++ GAW DPS
Sbjct: 318 WNVECQNQMEQIG-LADPSLYWNSTSSVGAWHDPS 351


>emb|CBI30590.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 60/180 (33%), Positives = 82/180 (45%), Gaps = 39/180 (21%)
 Frame = +2

Query: 5   IDLTPNSNHIIN---------SPLNFPF----------SGMFDYHRAAQMNGLGVRFSSG 127
           IDL+ +SNH+           S LN PF            +  Y    Q+  LG+ FSSG
Sbjct: 191 IDLSASSNHVTPLFYGLPSNPSELNLPFPRFNSRASNEDTVSGYDLQPQLGALGLGFSSG 250

Query: 128 LMVSELR--DYENG---SKQIQDPV----------LFGSSNFAPTTSTLMSYNEYPGLMP 262
           ++ ++ R  DY NG   +KQIQD V          +FGSS+ + TT T+ S       + 
Sbjct: 251 IIANDTRTDDYRNGFNPAKQIQDLVTSSSLLSNYSIFGSSS-STTTPTMAS-------LI 302

Query: 263 YEDVEVHGVSNIGKEVKREGENGF-----GLNNPNQIEQINDSTDSSLLWNTTNAGAWFD 427
              ++     N G   +  G N F      +   NQIEQI  S+D SL WN T+ GAW D
Sbjct: 303 NSSLQQQKFMN-GDLKESRGANHFQPLWNSVPCQNQIEQIG-SSDPSLYWNLTSLGAWSD 360


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