BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00028034
         (911 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [...   366   7e-99
emb|CBI31488.3| unnamed protein product [Vitis vinifera]              365   2e-98
gb|EOY18594.1| Pseudouridine synthase family protein [Theobroma ...   363   5e-98
ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [...   363   5e-98
ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatul...   362   1e-97
gb|EPS61385.1| hypothetical protein M569_13411, partial [Genlise...   358   2e-96
ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Popu...   357   4e-96
ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [...   356   6e-96
ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like...   355   1e-95
ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like...   355   1e-95
ref|XP_003556222.1| PREDICTED: RNA pseudouridine synthase 5-like...   355   2e-95
gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]           353   4e-95
ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [...   353   6e-95
ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [...   352   8e-95
ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [...   352   8e-95
ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like...   351   2e-94
gb|ESW15679.1| hypothetical protein PHAVU_007G093000g [Phaseolus...   350   5e-94
ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like...   345   2e-92
ref|XP_002877851.1| pseudouridine synthase family protein [Arabi...   337   3e-90
ref|XP_006291291.1| hypothetical protein CARUB_v10017427mg [Caps...   337   5e-90

>ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [Cicer arietinum]
          Length = 368

 Score =  366 bits (939), Expect = 7e-99
 Identities = 182/264 (68%), Positives = 215/264 (81%), Gaps = 1/264 (0%)
 Frame = -3

Query: 789 TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 610
           ++    G PWPE NDG+ Y D++RPSDAG TLI+FYS KYKSSAPL GWLQRI + QIT+
Sbjct: 2   SRQKKIGVPWPELNDGLSYNDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITV 61

Query: 609 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 430
           D  VVTDP  +LR G +LVYHRLPWKEPDAP+ +++LYED+D+IALNKPSGLQVLPGGLF
Sbjct: 62  DAKVVTDPNTLLRAGSKLVYHRLPWKEPDAPHTIQVLYEDDDIIALNKPSGLQVLPGGLF 121

Query: 429 QQRTVLTQLQRHADN-LTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADG 253
           QQRTVLTQLQ   +N  T   +Q+PHPVPVHRLGRGTSG+LLCAKTK+A+  LA++FADG
Sbjct: 122 QQRTVLTQLQWETNNKCTFEAHQKPHPVPVHRLGRGTSGILLCAKTKLARVHLASYFADG 181

Query: 252 TSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASP 73
           TS +G  R  DT Q+  + I K+YRAL SG+I  D+V IDQPIG+VKYPGVAKGLYVAS 
Sbjct: 182 TSRIGGKR--DTNQELGK-IAKIYRALVSGIIDNDKVTIDQPIGMVKYPGVAKGLYVASQ 238

Query: 72  SGKPALSKVVVLERNLLSNSTLVQ 1
           SGKPALS V +LERN+  NSTLVQ
Sbjct: 239 SGKPALSVVDILERNVKENSTLVQ 262


>emb|CBI31488.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  365 bits (936), Expect = 2e-98
 Identities = 178/260 (68%), Positives = 216/260 (83%), Gaps = 1/260 (0%)
 Frame = -3

Query: 777 SFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCV 598
           +FG PWP+FNDG+ Y D++  SD+  TLID+YS K+K+SAPL GWLQRI+  QIT+DG V
Sbjct: 4   TFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTV 63

Query: 597 VTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRT 418
           VT+PK ILR G +LVYHRLPW+EPDAPYLLEILYED+DVIALNKPSGLQVLPGGLFQQRT
Sbjct: 64  VTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRT 123

Query: 417 VLTQLQRHADNLTA-SGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 241
           VLTQLQ  A+   +    QE H VPVHRLGRGTSG+LLCAKTK+AK+RLAA+FADGTS V
Sbjct: 124 VLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVV 183

Query: 240 GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 61
           G  R  D + +  R I+K+YRAL +G++ +DE+ I+QPIG+V+YPGVAKGLYVASPSGKP
Sbjct: 184 GGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKP 243

Query: 60  ALSKVVVLERNLLSNSTLVQ 1
           ALSKV +LER++  +  +VQ
Sbjct: 244 ALSKVSILERDVQGDHMIVQ 263


>gb|EOY18594.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 378

 Score =  363 bits (932), Expect = 5e-98
 Identities = 180/264 (68%), Positives = 212/264 (80%), Gaps = 1/264 (0%)
 Frame = -3

Query: 789 TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 610
           T+ + FG PWPE NDG++Y D+++PSD+  TLI+FYS KYK+SAP  GWLQRI N QI++
Sbjct: 7   TQSLVFGLPWPELNDGLFYDDVIKPSDSELTLIEFYSSKYKNSAPSQGWLQRIQNGQISV 66

Query: 609 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 430
           DG VV DP  ILRG  ELVYHRLPWKEPDAP+ LE+LYED+D+IALNKPSGLQVLPGGLF
Sbjct: 67  DGRVVRDPNTILRGSSELVYHRLPWKEPDAPHALEVLYEDDDMIALNKPSGLQVLPGGLF 126

Query: 429 QQRTVLTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADG 253
           QQRTVLTQL       T+S   QE HPVPVHRLGRGTSG+LLCAKTK AK+ LAA+FADG
Sbjct: 127 QQRTVLTQLSWRMRKQTSSLASQESHPVPVHRLGRGTSGILLCAKTKAAKTCLAAYFADG 186

Query: 252 TSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASP 73
           TS +G       Q   TR I+K+YRAL +G++ ED+V I+QPIG+V+YPGVAKGLYVASP
Sbjct: 187 TSLIGANSNRKMQPSCTRKISKIYRALVTGILGEDKVVINQPIGIVQYPGVAKGLYVASP 246

Query: 72  SGKPALSKVVVLERNLLSNSTLVQ 1
           SGKPALSKV VLE++   N TLVQ
Sbjct: 247 SGKPALSKVEVLEKDEQQNHTLVQ 270


>ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [Vitis vinifera]
          Length = 348

 Score =  363 bits (932), Expect = 5e-98
 Identities = 178/261 (68%), Positives = 218/261 (83%), Gaps = 2/261 (0%)
 Frame = -3

Query: 777 SFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCV 598
           +FG PWP+FNDG+ Y D++  SD+  TLID+YS K+K+SAPL GWLQRI+  QIT+DG V
Sbjct: 4   TFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTV 63

Query: 597 VTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRT 418
           VT+PK ILR G +LVYHRLPW+EPDAPYLLEILYED+DVIALNKPSGLQVLPGGLFQQRT
Sbjct: 64  VTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRT 123

Query: 417 VLTQLQRHADNLTA-SGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 241
           VLTQLQ  A+   +    QE H VPVHRLGRGTSG+LLCAKTK+AK+RLAA+FADGTS V
Sbjct: 124 VLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVV 183

Query: 240 GVCRMN-DTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGK 64
           G  R++ D + +  R I+K+YRAL +G++ +DE+ I+QPIG+V+YPGVAKGLYVASPSGK
Sbjct: 184 GGNRLDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGK 243

Query: 63  PALSKVVVLERNLLSNSTLVQ 1
           PALSKV +LER++  +  +VQ
Sbjct: 244 PALSKVSILERDVQGDHMIVQ 264


>ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatula]
           gi|358349060|ref|XP_003638558.1| RNA pseudourine
           synthase [Medicago truncatula]
           gi|355481000|gb|AES62203.1| RNA pseudourine synthase
           [Medicago truncatula] gi|355504493|gb|AES85696.1| RNA
           pseudourine synthase [Medicago truncatula]
          Length = 371

 Score =  362 bits (928), Expect = 1e-97
 Identities = 183/259 (70%), Positives = 212/259 (81%), Gaps = 2/259 (0%)
 Frame = -3

Query: 771 GEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVVT 592
           G PWPEFNDG+ Y D++RPSDAG TLI+FYS KYKSSAPL GWLQRI + QIT+D  VVT
Sbjct: 8   GIPWPEFNDGLSYDDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITLDARVVT 67

Query: 591 DPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTVL 412
           DP  ILR G +LVYHR+PWKEPDAP+ +E+LYED+D+IALNKPSGLQVLPGGLFQQRTVL
Sbjct: 68  DPNTILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVL 127

Query: 411 TQLQRHADN-LTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV-G 238
           TQLQ   +N  T   +Q+PHPVPVHRLGRGTSG+LLCAKTK+A++RLA++FADGTS + G
Sbjct: 128 TQLQWETNNKSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSRIEG 187

Query: 237 VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 58
               N    K    I K+YRAL SG+I  D+V I+QPIG+VKYPGVAKGLYVAS SGKPA
Sbjct: 188 KGHTNQELGK----IAKIYRALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSGKPA 243

Query: 57  LSKVVVLERNLLSNSTLVQ 1
           LS V VLERN+  NSTLVQ
Sbjct: 244 LSVVHVLERNVKENSTLVQ 262


>gb|EPS61385.1| hypothetical protein M569_13411, partial [Genlisea aurea]
          Length = 256

 Score =  358 bits (919), Expect = 2e-96
 Identities = 180/258 (69%), Positives = 206/258 (79%)
 Frame = -3

Query: 774 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 595
           FGEPWPEFNDG+YYRD    SDAG  LI+FY+  + SSAP HGWLQRIHNKQIT+DG VV
Sbjct: 3   FGEPWPEFNDGVYYRDRCAASDAGRMLIEFYAENHGSSAPFHGWLQRIHNKQITVDGNVV 62

Query: 594 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 415
           TDP  +L+G EELVYHRLPWKEP+AP+ + ILYED+D+IALNKPSGLQVLPGG FQQRT+
Sbjct: 63  TDPHTVLKGVEELVYHRLPWKEPEAPHSIGILYEDDDMIALNKPSGLQVLPGGSFQQRTI 122

Query: 414 LTQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVGV 235
           LTQL+R  +N  +         PVHRLGRGTSGVLLCAKT  AKS LAA FA  TS V  
Sbjct: 123 LTQLRRRTENRVS----RCRATPVHRLGRGTSGVLLCAKTTRAKSHLAALFARETSVVET 178

Query: 234 CRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPAL 55
            R N    K TR ITKLYRAL SG+I++DEV IDQPIG+V+YPGV+ GLYVA+PSGKPAL
Sbjct: 179 SRHNPA-PKETRRITKLYRALVSGIILDDEVVIDQPIGVVEYPGVSHGLYVATPSGKPAL 237

Query: 54  SKVVVLERNLLSNSTLVQ 1
           S V++LERN+ SNSTLVQ
Sbjct: 238 SGVMILERNIRSNSTLVQ 255


>ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Populus trichocarpa]
           gi|222851845|gb|EEE89392.1| hypothetical protein
           POPTR_0008s04160g [Populus trichocarpa]
          Length = 377

 Score =  357 bits (915), Expect = 4e-96
 Identities = 176/263 (66%), Positives = 212/263 (80%), Gaps = 2/263 (0%)
 Frame = -3

Query: 783 MVSFGEPWPEFNDGIYYRDLLRPS-DAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITID 607
           + SFG PWP+ N+G++Y D++  S D+G TLI FYS KYK+SAPL GWLQRIHN QITID
Sbjct: 11  LCSFGSPWPDLNEGLFYNDVVSTSSDSGLTLIHFYSSKYKNSAPLQGWLQRIHNGQITID 70

Query: 606 GCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQ 427
           G VV +PK ILR G ELVYHRLPW+EPDAPYLL++LYED+D++ALNKP GLQVLPGGLFQ
Sbjct: 71  GEVVKEPKAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMVALNKPPGLQVLPGGLFQ 130

Query: 426 QRTVLTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGT 250
           QRTVL QLQ  A   ++S   Q  HPVPVHRLGRGTSG+LLCAKTK+AK+ LAA+FADGT
Sbjct: 131 QRTVLMQLQWRASKGSSSLAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGT 190

Query: 249 SAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPS 70
           S +G     + +Q   R I+K+YRAL +G++ +D++ I QPIG ++YPGVAKGLYVASPS
Sbjct: 191 SLIGDSSNANMEQSKRRKISKIYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPS 250

Query: 69  GKPALSKVVVLERNLLSNSTLVQ 1
           GKPALSKV VLER+   N TLVQ
Sbjct: 251 GKPALSKVEVLERDSQLNQTLVQ 273


>ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [Solanum lycopersicum]
          Length = 402

 Score =  356 bits (914), Expect = 6e-96
 Identities = 181/260 (69%), Positives = 210/260 (80%), Gaps = 2/260 (0%)
 Frame = -3

Query: 774 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 595
           FG PWP+ N+G+ Y D++RP+DAG TLI+FY RKYK+SAPL GWLQRI NKQITIDG VV
Sbjct: 37  FGVPWPQRNEGLSYHDIVRPTDAGLTLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 96

Query: 594 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 415
             P   LR G ELVYHRLPW+EPDAPYLLE+L+ED+ +I +NKPSGLQVLPGGL+QQRTV
Sbjct: 97  ILPDTELRAGAELVYHRLPWREPDAPYLLEVLFEDDYLIVVNKPSGLQVLPGGLYQQRTV 156

Query: 414 LTQLQRHADNL--TASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 241
           LTQLQ HA  L  T+SG Q+ HPVPVHRLGRGTSG+LLCAKTK+ KSRLAA+FA+GTS V
Sbjct: 157 LTQLQWHACKLTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 216

Query: 240 GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 61
              +  +++    R I K+YRAL SGV+  DE  I QPIG +KYPGVAKGLYVASPSGKP
Sbjct: 217 EE-KCTNSECNTMRKICKIYRALVSGVMDMDEAVIKQPIGTIKYPGVAKGLYVASPSGKP 275

Query: 60  ALSKVVVLERNLLSNSTLVQ 1
           ALS V VLER+  SN TLVQ
Sbjct: 276 ALSSVRVLERDSESNCTLVQ 295


>ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X2 [Citrus
           sinensis] gi|568865018|ref|XP_006485881.1| PREDICTED:
           RNA pseudouridine synthase 5-like isoform X3 [Citrus
           sinensis]
          Length = 389

 Score =  355 bits (911), Expect = 1e-95
 Identities = 177/259 (68%), Positives = 207/259 (79%), Gaps = 1/259 (0%)
 Frame = -3

Query: 774 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 595
           FGEPWP+ N+G+ Y D++ PSD+  TLI+FYS K+K+SAPL GWLQRI N QIT+DG VV
Sbjct: 13  FGEPWPQLNEGLLYNDVVSPSDSKLTLIEFYSTKHKNSAPLQGWLQRIQNGQITVDGRVV 72

Query: 594 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 415
            DP IIL  G ELVYHRLPWKEPD PYLLE+ YED+D+IALNKPSGLQVLPGGLFQQRTV
Sbjct: 73  NDPNIILSAGSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQRTV 132

Query: 414 LTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVG 238
           L QLQ  A   ++S   Q  HPVPVHRLGRGTSG+LLCAKTK+AK+ +AA+FAD TS V 
Sbjct: 133 LKQLQWRASKQSSSLSSQASHPVPVHRLGRGTSGILLCAKTKLAKTCIAAYFADKTSVVD 192

Query: 237 VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 58
               N   + + R ITK+YRAL  G++ ED+V I QPIG+V+YPGVAKGLYVASPSGKPA
Sbjct: 193 A--DNTVMELSQRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKPA 250

Query: 57  LSKVVVLERNLLSNSTLVQ 1
           LSKV VLER++  N TLVQ
Sbjct: 251 LSKVDVLERDVQRNCTLVQ 269


>ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Citrus
           sinensis]
          Length = 390

 Score =  355 bits (911), Expect = 1e-95
 Identities = 177/259 (68%), Positives = 207/259 (79%), Gaps = 1/259 (0%)
 Frame = -3

Query: 774 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 595
           FGEPWP+ N+G+ Y D++ PSD+  TLI+FYS K+K+SAPL GWLQRI N QIT+DG VV
Sbjct: 13  FGEPWPQLNEGLLYNDVVSPSDSKLTLIEFYSTKHKNSAPLQGWLQRIQNGQITVDGRVV 72

Query: 594 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 415
            DP IIL  G ELVYHRLPWKEPD PYLLE+ YED+D+IALNKPSGLQVLPGGLFQQRTV
Sbjct: 73  NDPNIILSAGSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQRTV 132

Query: 414 LTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVG 238
           L QLQ  A   ++S   Q  HPVPVHRLGRGTSG+LLCAKTK+AK+ +AA+FAD TS V 
Sbjct: 133 LKQLQWRASKQSSSLSSQASHPVPVHRLGRGTSGILLCAKTKLAKTCIAAYFADKTSVVD 192

Query: 237 VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 58
               N   + + R ITK+YRAL  G++ ED+V I QPIG+V+YPGVAKGLYVASPSGKPA
Sbjct: 193 A--DNTVMELSQRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKPA 250

Query: 57  LSKVVVLERNLLSNSTLVQ 1
           LSKV VLER++  N TLVQ
Sbjct: 251 LSKVDVLERDVQRNCTLVQ 269


>ref|XP_003556222.1| PREDICTED: RNA pseudouridine synthase 5-like [Glycine max]
          Length = 371

 Score =  355 bits (910), Expect = 2e-95
 Identities = 179/264 (67%), Positives = 216/264 (81%), Gaps = 1/264 (0%)
 Frame = -3

Query: 789 TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 610
           T    FG PWPE NDG+ Y D++R SDAGATLI+FYS KYKSSAPL GWLQRI + QIT+
Sbjct: 2   TSRKKFGIPWPECNDGLSYDDVVRASDAGATLIEFYSTKYKSSAPLQGWLQRIKSGQITV 61

Query: 609 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 430
           DG VVTD   +LR G +L+YHRLPWKEPDAP+++++LYED+D+IALNKPSGLQVLPGGL+
Sbjct: 62  DGGVVTDSNTVLRVGSKLIYHRLPWKEPDAPHMIDVLYEDDDMIALNKPSGLQVLPGGLY 121

Query: 429 QQRTVLTQLQRHADNL-TASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADG 253
           QQRT+LTQLQ  A+N  T   ++  HPVPVHRLGRGTSG+LLCAKTK+A++RLA+ FADG
Sbjct: 122 QQRTILTQLQWEANNQGTCEMHKRLHPVPVHRLGRGTSGILLCAKTKLARARLASHFADG 181

Query: 252 TSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASP 73
           TS VG  R  DT+Q+  + I K+YRAL SG++  D+V I+QPIG+VKYPGVAKGLYVAS 
Sbjct: 182 TSHVGGKR--DTKQELGK-IAKMYRALVSGIVENDKVTINQPIGIVKYPGVAKGLYVASE 238

Query: 72  SGKPALSKVVVLERNLLSNSTLVQ 1
           SGKPALS V +LE N+  NSTLVQ
Sbjct: 239 SGKPALSVVDILETNIQENSTLVQ 262


>gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]
          Length = 377

 Score =  353 bits (907), Expect = 4e-95
 Identities = 178/259 (68%), Positives = 210/259 (81%), Gaps = 1/259 (0%)
 Frame = -3

Query: 774 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 595
           FG  WPE NDG++Y D++R SD+ +TLI FYSRKYK+SAPL GWLQRI N QIT++G VV
Sbjct: 14  FGFSWPELNDGLFYSDVVRTSDSESTLIQFYSRKYKNSAPLQGWLQRIRNGQITVNGRVV 73

Query: 594 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 415
            DP  IL  G ELVYHRLPWKEP APY+LEILYED D+IAL+KPS LQVLPGGLFQQRTV
Sbjct: 74  RDPDTILSIGSELVYHRLPWKEPGAPYILEILYEDGDMIALDKPSELQVLPGGLFQQRTV 133

Query: 414 LTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVG 238
           LTQLQ  A   ++S    EP+PVPVHRLGRGTSG+LLCAKTK AK++LAA+FADGTS VG
Sbjct: 134 LTQLQWRATKQSSSLVCCEPNPVPVHRLGRGTSGILLCAKTKFAKTQLAAYFADGTSYVG 193

Query: 237 VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 58
               N+ +  A R I K+YRAL +G++ ED+V ++QPIG V+YPGVAKGLYVASPSGKPA
Sbjct: 194 GNSKNNLELNARRKILKIYRALVTGIVCEDKVIVEQPIGTVQYPGVAKGLYVASPSGKPA 253

Query: 57  LSKVVVLERNLLSNSTLVQ 1
           LSKV VLER++  N TLV+
Sbjct: 254 LSKVEVLERDVEKNCTLVK 272


>ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [Fragaria vesca subsp.
           vesca]
          Length = 375

 Score =  353 bits (905), Expect = 6e-95
 Identities = 175/260 (67%), Positives = 207/260 (79%), Gaps = 1/260 (0%)
 Frame = -3

Query: 777 SFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCV 598
           +FG PWP+ NDG+ Y D+++ SD+  TLI+FYS KYKSSAPL GWLQRI N QIT+DG V
Sbjct: 12  TFGLPWPDLNDGLSYNDVVKSSDSELTLIEFYSSKYKSSAPLQGWLQRIRNGQITVDGEV 71

Query: 597 VTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRT 418
           V D   ILR G ELVYHRLPW EPDAPYLLE+LYED+D+IALNKP GLQVLPGGLFQQRT
Sbjct: 72  VRDSDTILRVGSELVYHRLPWGEPDAPYLLEVLYEDDDMIALNKPGGLQVLPGGLFQQRT 131

Query: 417 VLTQ-LQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 241
           VLTQ L R +        Q+ H VPVHRLGRGTSG+LLCAKTK AK++LAA+FADGTS +
Sbjct: 132 VLTQLLWRESQKFDHLACQKSHLVPVHRLGRGTSGILLCAKTKHAKTQLAAYFADGTSHI 191

Query: 240 GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 61
           G     +T+   TR ITK+YRAL +G+I EDEV + QPIG V+YPGVAKGLY+ASP+GKP
Sbjct: 192 GDDSTTNTKLHTTRKITKIYRALVTGIICEDEVIVKQPIGTVRYPGVAKGLYIASPAGKP 251

Query: 60  ALSKVVVLERNLLSNSTLVQ 1
           ALSKV VL+R++  N T+VQ
Sbjct: 252 ALSKVEVLDRDIQKNHTIVQ 271


>ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  352 bits (904), Expect = 8e-95
 Identities = 172/257 (66%), Positives = 212/257 (82%)
 Frame = -3

Query: 771 GEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVVT 592
           G PWP+ NDG++Y D+++P D+G +LI FYS KYKSSAPL GWLQRI N+QITIDG V+T
Sbjct: 11  GIPWPDLNDGLFYNDVVKPPDSGKSLIHFYSWKYKSSAPLEGWLQRIKNEQITIDGEVIT 70

Query: 591 DPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTVL 412
           DP+ ILR G +LVY RLPWKEPD PYLLEILYEDN++IALNKPSGLQVLPGG+FQQRTVL
Sbjct: 71  DPETILRIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVL 130

Query: 411 TQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVGVC 232
           TQLQ  +   + S  +E HPVPVHRLGRGTSG+LLCAKTK+A+++ AA+FA+GTS+V   
Sbjct: 131 TQLQWWSSKQSFSVSEELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRN 190

Query: 231 RMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPALS 52
           R +  ++   R I+K+YRAL +G+I +DEV +DQPIG ++YPGVA+GLYVA+PSGKPA S
Sbjct: 191 RNSTMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACS 250

Query: 51  KVVVLERNLLSNSTLVQ 1
           KV VLER+  S  TLVQ
Sbjct: 251 KVNVLERDEQSKHTLVQ 267


>ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  352 bits (904), Expect = 8e-95
 Identities = 172/257 (66%), Positives = 212/257 (82%)
 Frame = -3

Query: 771 GEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVVT 592
           G PWP+ NDG++Y D+++P D+G +LI FYS KYKSSAPL GWLQRI N+QITIDG V+T
Sbjct: 11  GIPWPDLNDGLFYNDVVKPPDSGKSLIHFYSWKYKSSAPLEGWLQRIKNEQITIDGEVIT 70

Query: 591 DPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTVL 412
           DP+ ILR G +LVY RLPWKEPD PYLLEILYEDN++IALNKPSGLQVLPGG+FQQRTVL
Sbjct: 71  DPETILRIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVL 130

Query: 411 TQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVGVC 232
           TQLQ  +   + S  +E HPVPVHRLGRGTSG+LLCAKTK+A+++ AA+FA+GTS+V   
Sbjct: 131 TQLQWWSSKQSFSVSEELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRN 190

Query: 231 RMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPALS 52
           R +  ++   R I+K+YRAL +G+I +DEV +DQPIG ++YPGVA+GLYVA+PSGKPA S
Sbjct: 191 RNSTMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACS 250

Query: 51  KVVVLERNLLSNSTLVQ 1
           KV VLER+  S  TLVQ
Sbjct: 251 KVNVLERDEQSKHTLVQ 267


>ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X3 [Solanum
           tuberosum]
          Length = 374

 Score =  351 bits (900), Expect = 2e-94
 Identities = 178/260 (68%), Positives = 208/260 (80%), Gaps = 2/260 (0%)
 Frame = -3

Query: 774 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 595
           FG  WPE N+G+ Y D++RP+DAG  LI+FY RKYK+SAPL GWLQRI NKQITIDG VV
Sbjct: 14  FGVSWPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 73

Query: 594 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 415
             P   LR G ELVYHRLPW+EPDAPYLLE+L++D+ +I +NKPSGLQVLPGGL+QQRTV
Sbjct: 74  ILPDTELRAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLYQQRTV 133

Query: 414 LTQLQRHA--DNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 241
           LTQLQ HA     T+SG Q+ HPVPVHRLGRGTSG+LLCAKTK+ KSRLAA+FA+GTS V
Sbjct: 134 LTQLQWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 193

Query: 240 GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 61
              +  +++    R I K+YRAL SGV+  DEV I QPIG +KYPGVAKGLYVASPSGKP
Sbjct: 194 -EDKCTNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKP 252

Query: 60  ALSKVVVLERNLLSNSTLVQ 1
           ALS V VLER+  +N TLVQ
Sbjct: 253 ALSSVRVLERDSENNCTLVQ 272


>gb|ESW15679.1| hypothetical protein PHAVU_007G093000g [Phaseolus vulgaris]
          Length = 365

 Score =  350 bits (897), Expect = 5e-94
 Identities = 179/258 (69%), Positives = 213/258 (82%)
 Frame = -3

Query: 774 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 595
           FG PWPE NDG+ Y D++R SD+G TLI+FY  KYKSSAPL GWLQRI + QIT DG VV
Sbjct: 7   FGIPWPECNDGLSYDDVVRSSDSGLTLIEFYFTKYKSSAPLQGWLQRIKSGQITFDGRVV 66

Query: 594 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 415
           TD   +LR G +LVYHRLPWKEPDAP+++E+LYED+++IALNKPSGLQVLPGGLFQQRTV
Sbjct: 67  TDSSTVLRVGSKLVYHRLPWKEPDAPHMIEVLYEDDEMIALNKPSGLQVLPGGLFQQRTV 126

Query: 414 LTQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVGV 235
           LTQLQ  A NL    +++PHPVPVHRLGRGTSG+LLCAKTK+A++RLA++FADGTS +G 
Sbjct: 127 LTQLQWEA-NL----HKKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSHIGG 181

Query: 234 CRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPAL 55
            R  DT  +  + I K+YR LASG++  DEV I+QPIG+VKYPGVAKGLYVAS SGKPAL
Sbjct: 182 KR--DTNGEIGK-IAKIYRGLASGIVENDEVTINQPIGVVKYPGVAKGLYVASQSGKPAL 238

Query: 54  SKVVVLERNLLSNSTLVQ 1
           S V +LERN+  NSTLVQ
Sbjct: 239 SVVGILERNVQENSTLVQ 256


>ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Solanum
           tuberosum] gi|565360441|ref|XP_006346976.1| PREDICTED:
           RNA pseudouridine synthase 5-like isoform X2 [Solanum
           tuberosum]
          Length = 379

 Score =  345 bits (884), Expect = 2e-92
 Identities = 178/265 (67%), Positives = 208/265 (78%), Gaps = 7/265 (2%)
 Frame = -3

Query: 774 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 595
           FG  WPE N+G+ Y D++RP+DAG  LI+FY RKYK+SAPL GWLQRI NKQITIDG VV
Sbjct: 14  FGVSWPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 73

Query: 594 TDPKIIL-----RGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 430
             P   L     R G ELVYHRLPW+EPDAPYLLE+L++D+ +I +NKPSGLQVLPGGL+
Sbjct: 74  ILPDTELSFWMCRAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLY 133

Query: 429 QQRTVLTQLQRHA--DNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFAD 256
           QQRTVLTQLQ HA     T+SG Q+ HPVPVHRLGRGTSG+LLCAKTK+ KSRLAA+FA+
Sbjct: 134 QQRTVLTQLQWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAE 193

Query: 255 GTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVAS 76
           GTS V   +  +++    R I K+YRAL SGV+  DEV I QPIG +KYPGVAKGLYVAS
Sbjct: 194 GTSVV-EDKCTNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVAS 252

Query: 75  PSGKPALSKVVVLERNLLSNSTLVQ 1
           PSGKPALS V VLER+  +N TLVQ
Sbjct: 253 PSGKPALSSVRVLERDSENNCTLVQ 277


>ref|XP_002877851.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297323689|gb|EFH54110.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 387

 Score =  337 bits (865), Expect = 3e-90
 Identities = 172/261 (65%), Positives = 204/261 (78%), Gaps = 4/261 (1%)
 Frame = -3

Query: 771 GEPWPEFNDGIYYRDLLRPSDAGATLI-DFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 595
           G PWPE N G+ Y+D++  SD+  T + DFY  KYKSSAPL GW+QRI N QI IDG VV
Sbjct: 12  GLPWPELNVGLAYKDVISSSDSELTTVSDFYFTKYKSSAPLLGWIQRIQNGQIQIDGEVV 71

Query: 594 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 415
            DP  +LR G +LVYHRLPWKEPD PY L++LYED+D+IALNKPSGLQVLPGGLFQQRTV
Sbjct: 72  KDPNTLLRSGSKLVYHRLPWKEPDTPYSLQVLYEDDDLIALNKPSGLQVLPGGLFQQRTV 131

Query: 414 LTQLQ---RHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSA 244
           LTQLQ   R  D+ T S  + PHPVPVHRLGRGTSG+LLCAKTK+AK++LAA+FA+GTS 
Sbjct: 132 LTQLQWCFRKNDSYTGS-RESPHPVPVHRLGRGTSGILLCAKTKLAKTKLAAYFAEGTSL 190

Query: 243 VGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGK 64
           VG   +     K  R ++K+YRALA G++ EDEV I QP+G+V+YPGVAKGLYVASP GK
Sbjct: 191 VGSGNLEQECGKG-RKLSKIYRALADGIVEEDEVVIKQPLGVVRYPGVAKGLYVASPEGK 249

Query: 63  PALSKVVVLERNLLSNSTLVQ 1
           PA SKV VLER+   N TLV+
Sbjct: 250 PAFSKVAVLERDKQKNCTLVK 270


>ref|XP_006291291.1| hypothetical protein CARUB_v10017427mg [Capsella rubella]
           gi|482559998|gb|EOA24189.1| hypothetical protein
           CARUB_v10017427mg [Capsella rubella]
          Length = 382

 Score =  337 bits (863), Expect = 5e-90
 Identities = 172/259 (66%), Positives = 204/259 (78%), Gaps = 2/259 (0%)
 Frame = -3

Query: 771 GEPWPEFNDGIYYRDLLRPSDAGATLI-DFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 595
           G PWPE NDG+ Y+D++  S++  T + DFY  KYKSSAPL GW+QRI N QI IDG VV
Sbjct: 12  GLPWPEHNDGLEYKDVVSSSESELTTVSDFYFTKYKSSAPLLGWIQRIQNGQIQIDGEVV 71

Query: 594 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 415
            DPK +LR G +LVYHRLPWKEPD PY LEILYED+D+IALNKPSGLQVLPGGLFQQRT+
Sbjct: 72  KDPKTVLRSGSKLVYHRLPWKEPDTPYSLEILYEDDDLIALNKPSGLQVLPGGLFQQRTL 131

Query: 414 LTQLQ-RHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVG 238
           LTQLQ        ++G  E HPVPVHRLGRGTSG+LLCAKTK+AK++LAA+FA+GTS VG
Sbjct: 132 LTQLQWWFGKKDFSTGSPESHPVPVHRLGRGTSGILLCAKTKLAKTKLAAYFAEGTSLVG 191

Query: 237 VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 58
              + D      R ++K+YRALA G++ EDEV I QPIG+V+YPGVAKGLYVASP GKPA
Sbjct: 192 SGNL-DQDCGTGRKLSKIYRALADGIVEEDEVVIQQPIGVVRYPGVAKGLYVASPEGKPA 250

Query: 57  LSKVVVLERNLLSNSTLVQ 1
            SKVVVLER+   + TLV+
Sbjct: 251 FSKVVVLERDREKSCTLVK 269