BLASTX nr result
ID: Rehmannia26_contig00027561
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00027561
(1732 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353247.1| PREDICTED: pentatricopeptide repeat-containi... 550 e-154
ref|XP_004250507.1| PREDICTED: pentatricopeptide repeat-containi... 549 e-153
gb|ESW04026.1| hypothetical protein PHAVU_011G061000g [Phaseolus... 301 e-146
gb|EPS65453.1| hypothetical protein M569_09325, partial [Genlise... 525 e-146
ref|XP_002302689.2| hypothetical protein POPTR_0002s18390g [Popu... 467 e-129
ref|XP_006289934.1| hypothetical protein CARUB_v10003556mg [Caps... 466 e-128
ref|XP_006386676.1| pentatricopeptide repeat-containing family p... 464 e-128
ref|XP_002334407.1| predicted protein [Populus trichocarpa] 464 e-128
ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi... 464 e-128
gb|EOX95524.1| Pentatricopeptide repeat-containing protein, puta... 463 e-128
ref|XP_006396354.1| hypothetical protein EUTSA_v10028437mg [Eutr... 459 e-126
gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana] 454 e-125
ref|NP_192066.2| pentatricopeptide repeat-containing protein [Ar... 454 e-125
ref|XP_006444679.1| hypothetical protein CICLE_v10023806mg [Citr... 454 e-125
ref|XP_002874971.1| pentatricopeptide repeat-containing protein ... 454 e-125
ref|XP_006491416.1| PREDICTED: pentatricopeptide repeat-containi... 450 e-124
ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containi... 448 e-123
ref|XP_002515124.1| pentatricopeptide repeat-containing protein,... 439 e-120
gb|EXC13626.1| hypothetical protein L484_019583 [Morus notabilis] 433 e-118
ref|XP_004308750.1| PREDICTED: pentatricopeptide repeat-containi... 412 e-112
>ref|XP_006353247.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570-like
isoform X1 [Solanum tuberosum]
Length = 816
Score = 550 bits (1418), Expect = e-154
Identities = 263/378 (69%), Positives = 322/378 (85%), Gaps = 2/378 (0%)
Frame = +2
Query: 2 DSIPLSEDLVLQVLRRGSLDASKKLDFFRWCSVRPNYKHSAGTYSQMFKAICFLPHQHHD 181
DSIPLSE LVLQVLRR +LDA KKLDFF+WCS+RP++KHS TYSQMFK+IC+ H H +
Sbjct: 64 DSIPLSESLVLQVLRRNNLDAEKKLDFFKWCSLRPSFKHSTETYSQMFKSICY-SHNHRE 122
Query: 182 DILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVYS 361
I L+ SM+ D V+L+++T KL+LD F R+G +DSALE+L++VE DL N+SCLSPDVY+
Sbjct: 123 AIFVLLNSMKDDKVLLNAATFKLLLDSFTRTGNFDSALEILEFVEGDLDNSSCLSPDVYN 182
Query: 362 PVLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIACNELLVGLKKAGMKDEFKQV 541
VL+ALV+KNQ+++ALSIFLKLL ++ N + + A+ACNELLVGLK+ M+ EFKQV
Sbjct: 183 SVLIALVQKNQVNLALSIFLKLLETND--GNSIGVSSAVACNELLVGLKRGNMRAEFKQV 240
Query: 542 FGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHV 721
F KLR +FP DRWGYNICIHT GCWGDLS++LSLFKEMKE+ F PDLCTYNSLIHV
Sbjct: 241 FDKLRGGNVFPFDRWGYNICIHTFGCWGDLSSSLSLFKEMKERGSWFSPDLCTYNSLIHV 300
Query: 722 LCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGVRA 901
LCLLGKV+DA +VWEELKGSSG EPDA+TYRI+IQGCSK+Y INDA+K+F+EMQYNG+R
Sbjct: 301 LCLLGKVKDAFVVWEELKGSSGLEPDAYTYRIVIQGCSKAYLINDAIKVFTEMQYNGIRP 360
Query: 902 ETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGRAEAAYTL 1081
+T+VYN+LLDGLLK+RKLT+ACNLF+KM++DDGVRASCWTYNILIDGL+KNGRA AAYTL
Sbjct: 361 DTIVYNTLLDGLLKARKLTDACNLFQKMIEDDGVRASCWTYNILIDGLFKNGRALAAYTL 420
Query: 1082 FSDLKRKGE--VSGIRWS 1129
F DLK+K V G+ +S
Sbjct: 421 FCDLKKKSNNFVDGVTYS 438
Score = 265 bits (678), Expect = 4e-68
Identities = 133/214 (62%), Positives = 155/214 (72%), Gaps = 4/214 (1%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
+ G WD ERLMKH+RD NLVP I++WK +ME +MK PQS+ +DFTP+FPS + +IL
Sbjct: 481 KEGHWDYTERLMKHIRDSNLVPIIIRWKDSMEATMKAPQSREKDFTPIFPSNRNFGDILG 540
Query: 1282 LPTSADTKGDV----EDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXXKGVRV 1449
L D + D ED E E+D WSSSPYMDMLANK G R+
Sbjct: 541 LENLTDAETDTALGAEDAEIHYQESDPWSSSPYMDMLANKVSSQSNSSRTFSLTG-GKRI 599
Query: 1450 MAKDEDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGVDPVSYTYNSIMSSFVKRGY 1629
K DSFDIDMVNT+LSIFLAKGKLS+ACKLFEIFT+MG DPVSYTYNS+MSSFVK+GY
Sbjct: 600 DTKSADSFDIDMVNTFLSIFLAKGKLSMACKLFEIFTDMGADPVSYTYNSMMSSFVKKGY 659
Query: 1630 FKEAWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
F EAWG+L MGE V P+D+ATYNVIIQGLGKMG
Sbjct: 660 FNEAWGILQEMGEKVCPSDVATYNVIIQGLGKMG 693
Score = 64.3 bits (155), Expect = 2e-07
Identities = 45/151 (29%), Positives = 75/151 (49%)
Frame = +2
Query: 623 GDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDA 802
G LS A LF+ + DP TYNS++ G +A + +E+ G D
Sbjct: 623 GKLSMACKLFEIFTDMGA--DPVSYTYNSMMSSFVKKGYFNEAWGILQEM-GEKVCPSDV 679
Query: 803 FTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEK 982
TY ++IQG K R + A + ++ G + V+YN+L++ L K+ ++ E LF++
Sbjct: 680 ATYNVIIQGLGKMGRADLADAVLDKLMKQGGYLDIVMYNTLINALGKAGRIEEVNKLFQQ 739
Query: 983 MVDDDGVRASCWTYNILIDGLYKNGRAEAAY 1075
M + G+ TYN LI+ K G+ + +Y
Sbjct: 740 M-KNSGINPDVVTYNTLIEVHAKAGQLKQSY 769
Score = 62.0 bits (149), Expect = 8e-07
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Frame = +2
Query: 335 SCLSPDV--YSPVLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIACNELLVGLK 508
S SPD+ Y+ ++ L ++ A ++ +L SS + PDA ++ G
Sbjct: 285 SWFSPDLCTYNSLIHVLCLLGKVKDAFVVWEELKGSSGLE------PDAYTYRIVIQGCS 338
Query: 509 KAGMKDEFKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDP 688
KA + ++ +VF +++ + P D YN + L L+ A +LF++M E G+
Sbjct: 339 KAYLINDAIKVFTEMQYNGIRP-DTIVYNTLLDGLLKARKLTDACNLFQKMIEDDGV-RA 396
Query: 689 DLCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKI 868
TYN LI L G+ A ++ +LK S + D TY I+I + R+++A+K+
Sbjct: 397 SCWTYNILIDGLFKNGRALAAYTLFCDLKKKSNNFVDGVTYSIVILHLCREDRLDEALKL 456
Query: 869 FSEMQYNGVRAETVVYNSLLDGLLK 943
EM+ G + V SLL + K
Sbjct: 457 VEEMEARGFTVDLVTITSLLIAIYK 481
>ref|XP_004250507.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570-like
[Solanum lycopersicum]
Length = 819
Score = 549 bits (1415), Expect = e-153
Identities = 264/378 (69%), Positives = 317/378 (83%), Gaps = 2/378 (0%)
Frame = +2
Query: 2 DSIPLSEDLVLQVLRRGSLDASKKLDFFRWCSVRPNYKHSAGTYSQMFKAICFLPHQHHD 181
D IPLSE LVLQVLRR +LDA KKLDFF+WCS+RPN+KHS TYSQMFK IC+ H +
Sbjct: 67 DLIPLSESLVLQVLRRNNLDAEKKLDFFKWCSLRPNFKHSTETYSQMFKCICY-SRNHRE 125
Query: 182 DILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVYS 361
D+ L+ SM+ D V+L+S+T KL+LD F R+G +DSALE+L++VE DL N+SCLSPDVY+
Sbjct: 126 DVFVLLNSMKDDEVLLNSATFKLLLDSFTRTGNFDSALEILEFVEGDLANSSCLSPDVYN 185
Query: 362 PVLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIACNELLVGLKKAGMKDEFKQV 541
VL+ALV+KNQ+++ALSIFLKLL ++ N + + AIACNELLVGLK+ M+ EFKQV
Sbjct: 186 SVLIALVQKNQVNLALSIFLKLLETND--GNSIGVSSAIACNELLVGLKRGNMRAEFKQV 243
Query: 542 FGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHV 721
F KLR +FP DRWGYNICIH GCWGDLS +LSLFKEMKE+ F PDLCTYNSLIHV
Sbjct: 244 FDKLRGGNVFPFDRWGYNICIHAFGCWGDLSRSLSLFKEMKERGSCFSPDLCTYNSLIHV 303
Query: 722 LCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGVRA 901
LCLLGKV+DA +VWEELKGSSG EPDA+TYRI+IQGCSK+Y INDA+K+F+EMQYNG+R
Sbjct: 304 LCLLGKVKDAFVVWEELKGSSGLEPDAYTYRIVIQGCSKAYLINDAIKVFTEMQYNGIRP 363
Query: 902 ETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGRAEAAYTL 1081
+T+VYNSLLDGLLK RKLT+ACNLF+KM++DDGVRASCWTYNILIDGL+KNGRA AAYTL
Sbjct: 364 DTIVYNSLLDGLLKVRKLTDACNLFQKMIEDDGVRASCWTYNILIDGLFKNGRALAAYTL 423
Query: 1082 FSDLKRKGE--VSGIRWS 1129
F DLK+K V G+ +S
Sbjct: 424 FCDLKKKSNNFVDGVSYS 441
Score = 263 bits (673), Expect = 1e-67
Identities = 132/214 (61%), Positives = 156/214 (72%), Gaps = 4/214 (1%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
R G WD ERLMKH+RD NLVP I++WK +ME +MK PQS+ +DFTP+FPS + +IL
Sbjct: 484 REGHWDYTERLMKHIRDSNLVPIIIRWKDSMEATMKAPQSREKDFTPIFPSNRNFGDILG 543
Query: 1282 LPTSADTKGDV----EDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXXKGVRV 1449
L D + D+ E+ E E+D WSSSPYMD+LA+K G R+
Sbjct: 544 LENLTDAETDIALGAEEAEIHYQESDPWSSSPYMDLLADKVSSQSNSSRTFSLTG-GKRI 602
Query: 1450 MAKDEDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGVDPVSYTYNSIMSSFVKRGY 1629
K DSFDIDMVNT+LSIFLAKGKLS+ACKLFEIFT+MG DPVSYTYNS+MSSFVK+GY
Sbjct: 603 DTKSADSFDIDMVNTFLSIFLAKGKLSMACKLFEIFTDMGADPVSYTYNSMMSSFVKKGY 662
Query: 1630 FKEAWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
F EAWGVL MGE V P+D+ATYNVIIQGLGKMG
Sbjct: 663 FNEAWGVLQEMGEKVCPSDVATYNVIIQGLGKMG 696
Score = 66.6 bits (161), Expect = 3e-08
Identities = 47/151 (31%), Positives = 75/151 (49%)
Frame = +2
Query: 623 GDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDA 802
G LS A LF+ + DP TYNS++ G +A V +E+ G D
Sbjct: 626 GKLSMACKLFEIFTDMGA--DPVSYTYNSMMSSFVKKGYFNEAWGVLQEM-GEKVCPSDV 682
Query: 803 FTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEK 982
TY ++IQG K R + A + ++ G + V+YN+L++ L K+ ++ E LF++
Sbjct: 683 ATYNVIIQGLGKMGRADLADAVLDKLMKQGGYLDIVMYNTLINALGKAGRIEEVNKLFQQ 742
Query: 983 MVDDDGVRASCWTYNILIDGLYKNGRAEAAY 1075
M D G+ TYN LI+ K G+ + +Y
Sbjct: 743 M-KDSGINPDVVTYNTLIEVHAKAGQLKQSY 772
>gb|ESW04026.1| hypothetical protein PHAVU_011G061000g [Phaseolus vulgaris]
Length = 718
Score = 301 bits (770), Expect(2) = e-146
Identities = 166/368 (45%), Positives = 231/368 (62%), Gaps = 1/368 (0%)
Frame = +2
Query: 5 SIPLSEDLVLQVLRRGSLDASKKLDFFRWCSVRPNYKHSAGTYSQMFKAICFLPHQHHDD 184
++ L++ L+L++L S+ S+KL FF W R ++ S YS + +++ D
Sbjct: 35 ALGLTQPLILKILSNQSIHPSQKLRFFEWS--RSHHNPSPAAYSLVLRSLTGAGF--FSD 90
Query: 185 ILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVYSP 364
+ L+ SM DGVVLD +L L+L FI S ++ A ++LDYV+ ++ + +Y+
Sbjct: 91 VPSLLHSMTEDGVVLDPHSLNLLLHSFIFSSNFNLAFQLLDYVQHLQLDATT----IYNS 146
Query: 365 VLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIACNELLVGLKKAGMKDEFKQVF 544
++ AL+ KNQ+S+ALSIF KLL + + +IACN+LLV L+KA M+ EFKQVF
Sbjct: 147 LIAALLTKNQLSLALSIFFKLLDT--------VDSKSIACNQLLVALRKADMRVEFKQVF 198
Query: 545 GKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEK-SGLFDPDLCTYNSLIHV 721
KLRE K F D WGYN+CIH GCWGDL++ +LFKEMK+ GL PDLCTYNSLI
Sbjct: 199 TKLREKKGFSFDTWGYNVCIHAFGCWGDLASCFALFKEMKDDGKGLVSPDLCTYNSLITA 258
Query: 722 LCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGVRA 901
LC LGKV DAL+VWEEL +S H+PD FTY LI C ++R+ DA ++F+ MQ +G R
Sbjct: 259 LCRLGKVDDALVVWEEL-NASVHQPDRFTYTNLIHACCGTFRMGDATRVFNHMQSHGFRP 317
Query: 902 ETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGRAEAAYTL 1081
+T+VYNSLLDG K+ K+ EAC LFEKMV +GL K G+ E A L
Sbjct: 318 DTLVYNSLLDGHFKATKVVEACQLFEKMVQ---------------EGLCKEGQLEEALQL 362
Query: 1082 FSDLKRKG 1105
+++ +G
Sbjct: 363 VEEMESRG 370
Score = 248 bits (633), Expect(2) = e-146
Identities = 125/211 (59%), Positives = 155/211 (73%), Gaps = 1/211 (0%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
R G+WD +RLMK++R+G+LV S+LKWK+ ME SMK P K +D++PMFPS D ++I++
Sbjct: 387 RHGRWDWTDRLMKYIREGDLVVSVLKWKAGMEASMKNPPGKKKDYSPMFPSKGDFSDIVS 446
Query: 1282 LPTSADTKGDVEDTEQFGNE-TDEWSSSPYMDMLANKXXXXXXXXXXXXXXXKGVRVMAK 1458
T A ++ D E+ + DEWSSSP+MD LAN+ +G RV K
Sbjct: 447 FMTRAQDTTNINDGEETSCDGIDEWSSSPHMDKLANQMCSTGYSSQLFTPS-RGQRVQEK 505
Query: 1459 DEDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGVDPVSYTYNSIMSSFVKRGYFKE 1638
DSFD+DMVNT+LSIFLAKGKLSLACKLFEIF++ GV PVSY+YNSIMSSFVK+GYF E
Sbjct: 506 GPDSFDVDMVNTFLSIFLAKGKLSLACKLFEIFSDAGVSPVSYSYNSIMSSFVKKGYFTE 565
Query: 1639 AWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
AW VL MGE + PADIATYN+IIQGLGKMG
Sbjct: 566 AWAVLTEMGEQICPADIATYNMIIQGLGKMG 596
Score = 60.1 bits (144), Expect = 3e-06
Identities = 46/177 (25%), Positives = 86/177 (48%)
Frame = +2
Query: 350 DVYSPVLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIACNELLVGLKKAGMKDE 529
D+ + L + K ++S+A +F + ++ + P + + N ++ K G E
Sbjct: 513 DMVNTFLSIFLAKGKLSLACKLF-------EIFSDAGVSPVSYSYNSIMSSFVKKGYFTE 565
Query: 530 FKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNS 709
V ++ E ++ P D YN+ I LG G A ++ + ++ G D+ YN+
Sbjct: 566 AWAVLTEMGE-QICPADIATYNMIIQGLGKMGRADLASAVLDTLLKQGGYL--DIVMYNT 622
Query: 710 LIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEM 880
LI+ L G++++ ++E+++ SSG PD TY LI+ SK+ + DA K M
Sbjct: 623 LINALGKAGRIKEVNKLFEQMR-SSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMM 678
>gb|EPS65453.1| hypothetical protein M569_09325, partial [Genlisea aurea]
Length = 770
Score = 525 bits (1351), Expect = e-146
Identities = 258/368 (70%), Positives = 303/368 (82%)
Frame = +2
Query: 2 DSIPLSEDLVLQVLRRGSLDASKKLDFFRWCSVRPNYKHSAGTYSQMFKAICFLPHQHHD 181
DSIPLSED+VLQ++ SL SKKL+FFRWCS RP+Y H+A YS+M +AI P+QHH+
Sbjct: 26 DSIPLSEDVVLQIVHHRSLVISKKLEFFRWCSSRPDYNHTANAYSEMLRAIFRFPNQHHN 85
Query: 182 DILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVYS 361
+++EL+A M+RDGV+LDS TLK IL+G IR+ K+D AL+VLDY+EKD + LSPDVYS
Sbjct: 86 NVIELLALMKRDGVILDSDTLKRILNGLIRAQKFDYALDVLDYIEKDSVIAGNLSPDVYS 145
Query: 362 PVLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIACNELLVGLKKAGMKDEFKQV 541
PVLVALVRK+QISIAL +F KLL S IPDA ACNELL GLKK MK+EF++V
Sbjct: 146 PVLVALVRKDQISIALPVFFKLLHSQFED----YIPDAFACNELLAGLKKKKMKNEFREV 201
Query: 542 FGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHV 721
F KLRET +P DRWGYNICIH+ GCWGDLSTALSLFKEMK++ G PDLCTYNSLI V
Sbjct: 202 FAKLRETARYPSDRWGYNICIHSFGCWGDLSTALSLFKEMKDRGGSVYPDLCTYNSLIQV 261
Query: 722 LCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGVRA 901
C LG++ DAL++W+ELK SSG+EPD FTYRILIQGCSKSYRINDAM IF+EMQYNG+RA
Sbjct: 262 FCSLGRLNDALVIWKELKNSSGYEPDRFTYRILIQGCSKSYRINDAMTIFNEMQYNGIRA 321
Query: 902 ETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGRAEAAYTL 1081
ETV YNSL+DGL KSRKLT AC+ FE+MV D+ VRASC TYNI+IDGLY+NGR EAAY L
Sbjct: 322 ETVTYNSLMDGLFKSRKLTTACSFFERMV-DNRVRASCSTYNIIIDGLYRNGRPEAAYAL 380
Query: 1082 FSDLKRKG 1105
FSDLKRKG
Sbjct: 381 FSDLKRKG 388
Score = 202 bits (515), Expect = 3e-49
Identities = 107/223 (47%), Positives = 139/223 (62%), Gaps = 13/223 (5%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
R G D E+LMKHVR+GNL+PS+ KWKSA+E S+ PQ K RDFTPMFP + + EIL
Sbjct: 441 RAGHSDFTEKLMKHVRNGNLIPSVFKWKSALESSLMSPQGKERDFTPMFPEVRSIDEILE 500
Query: 1282 LPTS-ADTK---GDVEDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXXKGVRV 1449
S A T+ G V++ ++ DEWSSSPYMD LA + VR
Sbjct: 501 ATKSVASTRSEDGTVKNGDEGEERADEWSSSPYMDELARNLSGDHRYSSHFFTMFRAVRA 560
Query: 1450 MAKDEDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGVDPVS---------YTYNSI 1602
+ + E+SFD+DM NTYLS+ GKLS ACK+ E+ + GV P S Y YNS+
Sbjct: 561 VGRGEESFDVDMANTYLSLLSGTGKLSSACKVLELLSRGGVGPNSESSLANVFCYGYNSL 620
Query: 1603 MSSFVKRGYFKEAWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
SSF+K+GY KEAWG+L + PAD+ATY++I++GLGKMG
Sbjct: 621 TSSFIKKGYVKEAWGILLRHFD-AGPADVATYSLIVRGLGKMG 662
>ref|XP_002302689.2| hypothetical protein POPTR_0002s18390g [Populus trichocarpa]
gi|550345304|gb|EEE81962.2| hypothetical protein
POPTR_0002s18390g [Populus trichocarpa]
Length = 776
Score = 467 bits (1201), Expect = e-129
Identities = 243/376 (64%), Positives = 289/376 (76%), Gaps = 7/376 (1%)
Frame = +2
Query: 2 DSIPLSEDLVLQVLRRGSLDASKKLDFFRWCSVRPNYKHSAGTYSQMFKAICFLPHQHHD 181
DSIPLSE LVLQ+LRR SLD+SKK++FF+WCSVR YKHS TYSQMF +C + D
Sbjct: 25 DSIPLSESLVLQILRRNSLDSSKKMEFFKWCSVRHIYKHSVSTYSQMFSTLC--RSGYLD 82
Query: 182 DILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVYS 361
++ +L+ SM+ DGVV+ S T KL+LD FIRSGK+DSAL++LD++E+ N + P +Y
Sbjct: 83 EVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGKFDSALDILDHMEELGSNPN---PHMYD 139
Query: 362 PVLVALVRKNQISIALSIFLKLLSSSTVGNNV----VIIPDAIACNELLVGLKKAGMKDE 529
++VAL +KNQ+ +ALSI KLL +S GN V +P ++ACN LLV L+ MK E
Sbjct: 140 SIIVALAKKNQVGLALSIMFKLLEASD-GNEENAVGVSLPGSVACNALLVALRNGEMKVE 198
Query: 530 FKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKS---GLFDPDLCT 700
FK VF KLR F L+ WGYNICIH GCWGDL+T+L LFKEMKEKS G DPDLCT
Sbjct: 199 FKTVFAKLRGKGGFELNTWGYNICIHAFGCWGDLTTSLRLFKEMKEKSLASGSLDPDLCT 258
Query: 701 YNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEM 880
YNSLIHVLCL GKV+DA+IV+EELK SGHEPDAFTYRILIQGC KSY++ DA KIFSEM
Sbjct: 259 YNSLIHVLCLAGKVKDAVIVYEELK-VSGHEPDAFTYRILIQGCCKSYQMEDATKIFSEM 317
Query: 881 QYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGR 1060
QYNG +TVVYNSLLDG+ K+RK+ EAC LFEKMV DGVRASCWTYNILIDGL KNGR
Sbjct: 318 QYNGFLPDTVVYNSLLDGMFKARKVMEACQLFEKMV-QDGVRASCWTYNILIDGLCKNGR 376
Query: 1061 AEAAYTLFSDLKRKGE 1108
AEA Y LF LK+KG+
Sbjct: 377 AEAGYNLFCGLKKKGQ 392
Score = 254 bits (649), Expect = 8e-65
Identities = 128/213 (60%), Positives = 153/213 (71%), Gaps = 3/213 (1%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
++G+WD ERLMKH+RD NL+P++LKW++ ME S+K P D+TPMFPS + EI++
Sbjct: 443 KQGRWDCTERLMKHIRDVNLLPNVLKWRADMEASLKNPPRSREDYTPMFPSTGGLQEIMS 502
Query: 1282 L---PTSADTKGDVEDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXXKGVRVM 1452
P S G ED + +TD+WSSSPYMD LAN+ +G RV
Sbjct: 503 SISSPKSRSDDGATEDEKSSSADTDQWSSSPYMDHLANQAKSTDLSSQLFSLA-RGQRVQ 561
Query: 1453 AKDEDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGVDPVSYTYNSIMSSFVKRGYF 1632
AK SFDIDMVNT+LSIFLAKGKLSLACKLFEIFT+MGVDPVSYTYNSIMSSFVK+GYF
Sbjct: 562 AKGAGSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTDMGVDPVSYTYNSIMSSFVKKGYF 621
Query: 1633 KEAWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
AW V + MGE V P DIATYN++IQGLGKMG
Sbjct: 622 NRAWDVFNEMGEKVCPPDIATYNLVIQGLGKMG 654
Score = 75.5 bits (184), Expect = 7e-11
Identities = 53/151 (35%), Positives = 77/151 (50%)
Frame = +2
Query: 623 GDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDA 802
G LS A LF+ + DP TYNS++ G A V+ E+ G PD
Sbjct: 584 GKLSLACKLFEIFTDMG--VDPVSYTYNSIMSSFVKKGYFNRAWDVFNEM-GEKVCPPDI 640
Query: 803 FTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEK 982
TY ++IQG K R + A + ++ G + V+YN+L+D L K+ ++ EA NLFE+
Sbjct: 641 ATYNLVIQGLGKMGRADLASSVLDKLMKQGGYLDIVMYNTLIDALGKAGRIDEANNLFEQ 700
Query: 983 MVDDDGVRASCWTYNILIDGLYKNGRAEAAY 1075
M G+ TYNI+I+ K GR + AY
Sbjct: 701 M-KISGLNPDVVTYNIMIEVHSKTGRLKDAY 730
Score = 61.2 bits (147), Expect = 1e-06
Identities = 40/134 (29%), Positives = 69/134 (51%)
Frame = +2
Query: 590 YNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVLCLLGKVRDALIVWEE 769
YN + + G + A +F EM EK + PD+ TYN +I L +G+ A V ++
Sbjct: 608 YNSIMSSFVKKGYFNRAWDVFNEMGEK--VCPPDIATYNLVIQGLGKMGRADLASSVLDK 665
Query: 770 LKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAETVVYNSLLDGLLKSR 949
L G+ D Y LI K+ RI++A +F +M+ +G+ + V YN +++ K+
Sbjct: 666 LMKQGGYL-DIVMYNTLIDALGKAGRIDEANNLFEQMKISGLNPDVVTYNIMIEVHSKTG 724
Query: 950 KLTEACNLFEKMVD 991
+L +A + M+D
Sbjct: 725 RLKDAYKFLKMMLD 738
>ref|XP_006289934.1| hypothetical protein CARUB_v10003556mg [Capsella rubella]
gi|482558640|gb|EOA22832.1| hypothetical protein
CARUB_v10003556mg [Capsella rubella]
Length = 802
Score = 466 bits (1200), Expect = e-128
Identities = 240/380 (63%), Positives = 293/380 (77%), Gaps = 11/380 (2%)
Frame = +2
Query: 2 DSIPLSEDLVLQVLRRGSLDASKKLDFFRWC-SVRPNYKHSAGTYSQMFKAICFLPHQHH 178
+SIP+SE +VLQ+LRR S+D+SKKLDFFRWC S+RP YKHSA YSQ+F+ +C
Sbjct: 51 NSIPISESVVLQILRRSSIDSSKKLDFFRWCFSLRPGYKHSASAYSQIFRTVCRTGLI-- 108
Query: 179 DDILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVY 358
++ +L+ SM+ DGV LD + K++LD IRSGK+DSAL VLDY+E+ CL+P +Y
Sbjct: 109 GEVPDLLGSMKDDGVNLDQTMAKVLLDSLIRSGKFDSALGVLDYMEE---LGDCLNPGLY 165
Query: 359 SPVLVALVRKNQISIALSIFLKLLSSS------TVGNNVVIIPDAIACNELLVGLKKAGM 520
VLVALV+KN++ +ALSIF KLL +S T G V +P +A NELLVGL++AGM
Sbjct: 166 DSVLVALVKKNEMRLALSIFFKLLEASDNHSDGTGGVIVSYLPGTVAVNELLVGLRRAGM 225
Query: 521 KDEFKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGL----FDP 688
+ EFK+VF KLRE K F D WGYNICIH GCWGDL ALSLFKEMK +S + F P
Sbjct: 226 RSEFKRVFEKLREVKRFKFDTWGYNICIHGFGCWGDLDAALSLFKEMKVQSSVSGSSFGP 285
Query: 689 DLCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKI 868
D+CTYNSLIHVLCL GK +DALIVW+ELK SGHEPD TYRILIQGC KSYR++DAM+I
Sbjct: 286 DICTYNSLIHVLCLFGKAKDALIVWDELK-VSGHEPDNSTYRILIQGCCKSYRMDDAMRI 344
Query: 869 FSEMQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLY 1048
F EMQYNG +T+VYN LLDG LK+RK+TEAC LFEKMV +GVRASCWTYNILIDGL+
Sbjct: 345 FGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV-QEGVRASCWTYNILIDGLF 403
Query: 1049 KNGRAEAAYTLFSDLKRKGE 1108
++GRAEA +TLF DLK+KG+
Sbjct: 404 RSGRAEAGFTLFCDLKKKGQ 423
Score = 212 bits (540), Expect = 4e-52
Identities = 114/211 (54%), Positives = 146/211 (69%), Gaps = 1/211 (0%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
++G+WD E+L+KH+R+GNLV ++L+W + +E S+K PQ+K +D+T MFPS +I+N
Sbjct: 474 KQGRWDWKEKLIKHIREGNLVSNVLRWNAGVEASLKRPQNKDKDYTSMFPSKGSFLDIMN 533
Query: 1282 LPTSADTKGDVEDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXXKGVRVMAKD 1461
+ +S D D E E D WSSSP MD LA++ +G RV AK
Sbjct: 534 MVSSED--DGARDEEVSPMEDDPWSSSPCMDQLAHQ----SSRPNPLFGLARGQRVEAK- 586
Query: 1462 EDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGV-DPVSYTYNSIMSSFVKRGYFKE 1638
DSFD+DM+NT+LSI+L+KG LSLACKLFEIF MGV D SYTYNS+MSSFVK+GYF+
Sbjct: 587 PDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFEGMGVTDLTSYTYNSMMSSFVKKGYFET 646
Query: 1639 AWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
A GVL MGE +DIATYNVII GLGKMG
Sbjct: 647 ARGVLDQMGENFCASDIATYNVIIHGLGKMG 677
Score = 62.4 bits (150), Expect = 6e-07
Identities = 41/139 (29%), Positives = 68/139 (48%)
Frame = +2
Query: 575 LDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVLCLLGKVRDAL 754
L + YN + + G TA + +M E D+ TYN +IH L +G+ A
Sbjct: 626 LTSYTYNSMMSSFVKKGYFETARGVLDQMGEN--FCASDIATYNVIIHGLGKMGRADLAS 683
Query: 755 IVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAETVVYNSLLDG 934
V + L G+ D Y LI K+ R+++A ++F M+ NG+ + V YN++++
Sbjct: 684 AVLDRLTKQGGYL-DIVMYNTLINSLGKANRLDEATRLFEHMKSNGINPDVVSYNTMIEV 742
Query: 935 LLKSRKLTEACNLFEKMVD 991
K+ KL EA + M+D
Sbjct: 743 NSKAGKLKEAYKYLKMMLD 761
>ref|XP_006386676.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550345301|gb|ERP64473.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 776
Score = 464 bits (1194), Expect = e-128
Identities = 242/376 (64%), Positives = 289/376 (76%), Gaps = 7/376 (1%)
Frame = +2
Query: 2 DSIPLSEDLVLQVLRRGSLDASKKLDFFRWCSVRPNYKHSAGTYSQMFKAICFLPHQHHD 181
DSIPLSE LVLQ+LRR SLD+SKK++FF+WCSVR YKHS TYSQMF +C + +
Sbjct: 25 DSIPLSEYLVLQILRRNSLDSSKKMEFFKWCSVRHIYKHSVSTYSQMFSTLC--RSGYLE 82
Query: 182 DILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVYS 361
++ +L+ SM+ DGVV+ S T KL+LD FIRSGK+DSAL++LD++E+ N + P +Y
Sbjct: 83 EVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGKFDSALDILDHMEELGSNPN---PHMYD 139
Query: 362 PVLVALVRKNQISIALSIFLKLLSSSTVGNNV----VIIPDAIACNELLVGLKKAGMKDE 529
++VAL +KNQ+ +ALSI KLL +S GN V +P ++ACN LLV L+ MK E
Sbjct: 140 SIIVALAKKNQVGLALSIMFKLLEASD-GNEENAVRVSLPGSVACNALLVALRNGEMKVE 198
Query: 530 FKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKS---GLFDPDLCT 700
FK VF KLR F L+ WGYNICIH GCWGDL+T+L LFKEMKEKS G DPDLCT
Sbjct: 199 FKTVFAKLRGKVGFKLNTWGYNICIHAFGCWGDLTTSLRLFKEMKEKSLASGSLDPDLCT 258
Query: 701 YNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEM 880
YNSLIHVLCL GKV+DA+IV+EELK SGHEPDAFTYRILIQGC KSY++ DA KIFSEM
Sbjct: 259 YNSLIHVLCLAGKVKDAVIVYEELK-VSGHEPDAFTYRILIQGCCKSYQMEDATKIFSEM 317
Query: 881 QYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGR 1060
QYNG +TVVYNSLLDG+ K+RK+ EAC LFEKMV DGVRASCWTYNILIDGL KNGR
Sbjct: 318 QYNGFLPDTVVYNSLLDGMFKARKVMEACQLFEKMV-QDGVRASCWTYNILIDGLCKNGR 376
Query: 1061 AEAAYTLFSDLKRKGE 1108
AEA Y LF LK+KG+
Sbjct: 377 AEAGYNLFCGLKKKGQ 392
Score = 254 bits (649), Expect = 8e-65
Identities = 128/213 (60%), Positives = 153/213 (71%), Gaps = 3/213 (1%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
++G+WD ERLMKH+RD NL+P++LKW++ ME S+K P D+TPMFPS + EI++
Sbjct: 443 KQGRWDCTERLMKHIRDVNLLPNVLKWRADMEASLKNPPRSREDYTPMFPSTGGLQEIMS 502
Query: 1282 L---PTSADTKGDVEDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXXKGVRVM 1452
P S G ED + +TD+WSSSPYMD LAN+ +G RV
Sbjct: 503 SISSPKSRSDDGATEDEKSSSADTDQWSSSPYMDHLANQAKSTDLSSQLFSLA-RGQRVQ 561
Query: 1453 AKDEDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGVDPVSYTYNSIMSSFVKRGYF 1632
AK SFDIDMVNT+LSIFLAKGKLSLACKLFEIFT+MGVDPVSYTYNSIMSSFVK+GYF
Sbjct: 562 AKGAGSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTDMGVDPVSYTYNSIMSSFVKKGYF 621
Query: 1633 KEAWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
AW V + MGE V P DIATYN++IQGLGKMG
Sbjct: 622 NRAWDVFNEMGEKVCPPDIATYNLVIQGLGKMG 654
Score = 75.5 bits (184), Expect = 7e-11
Identities = 53/151 (35%), Positives = 77/151 (50%)
Frame = +2
Query: 623 GDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDA 802
G LS A LF+ + DP TYNS++ G A V+ E+ G PD
Sbjct: 584 GKLSLACKLFEIFTDMG--VDPVSYTYNSIMSSFVKKGYFNRAWDVFNEM-GEKVCPPDI 640
Query: 803 FTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEK 982
TY ++IQG K R + A + ++ G + V+YN+L+D L K+ ++ EA NLFE+
Sbjct: 641 ATYNLVIQGLGKMGRADLASSVLDKLMKQGGYLDIVMYNTLIDALGKAGRIDEANNLFEQ 700
Query: 983 MVDDDGVRASCWTYNILIDGLYKNGRAEAAY 1075
M G+ TYNI+I+ K GR + AY
Sbjct: 701 M-KISGLNPDVVTYNIMIEVHSKTGRLKDAY 730
Score = 61.2 bits (147), Expect = 1e-06
Identities = 40/134 (29%), Positives = 69/134 (51%)
Frame = +2
Query: 590 YNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVLCLLGKVRDALIVWEE 769
YN + + G + A +F EM EK + PD+ TYN +I L +G+ A V ++
Sbjct: 608 YNSIMSSFVKKGYFNRAWDVFNEMGEK--VCPPDIATYNLVIQGLGKMGRADLASSVLDK 665
Query: 770 LKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAETVVYNSLLDGLLKSR 949
L G+ D Y LI K+ RI++A +F +M+ +G+ + V YN +++ K+
Sbjct: 666 LMKQGGYL-DIVMYNTLIDALGKAGRIDEANNLFEQMKISGLNPDVVTYNIMIEVHSKTG 724
Query: 950 KLTEACNLFEKMVD 991
+L +A + M+D
Sbjct: 725 RLKDAYKFLKMMLD 738
>ref|XP_002334407.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 464 bits (1194), Expect = e-128
Identities = 241/376 (64%), Positives = 289/376 (76%), Gaps = 7/376 (1%)
Frame = +2
Query: 2 DSIPLSEDLVLQVLRRGSLDASKKLDFFRWCSVRPNYKHSAGTYSQMFKAICFLPHQHHD 181
DSIPLSE LVLQ+LRR SLD+SKK++FF+WCSVR YKHS TYSQMF +C + +
Sbjct: 25 DSIPLSESLVLQILRRNSLDSSKKMEFFKWCSVRHIYKHSVSTYSQMFSTLC--RSGYLE 82
Query: 182 DILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVYS 361
++ +L+ SM+ DGVV+ S T KL+LD FIRSGK+DSAL++LD++E+ N + P +Y
Sbjct: 83 EVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGKFDSALDILDHMEELGSNPN---PHMYD 139
Query: 362 PVLVALVRKNQISIALSIFLKLLSSSTVGNNV----VIIPDAIACNELLVGLKKAGMKDE 529
++VAL +KNQ+ +ALSI KLL +S GN V +P ++ACN LLV L+ MK E
Sbjct: 140 SIIVALAKKNQVGLALSIMFKLLEASD-GNEENAVGVSLPGSVACNALLVALRNGEMKVE 198
Query: 530 FKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKS---GLFDPDLCT 700
FK VF KLR F L+ WGYNICIH GCWGDL+T+L LFKEMKEKS G DPDLCT
Sbjct: 199 FKTVFAKLRGKVGFELNTWGYNICIHAFGCWGDLTTSLRLFKEMKEKSLASGSLDPDLCT 258
Query: 701 YNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEM 880
YNSLIHVLCL GKV+DA+IV+EELK SGHEPDAFTYRILIQGC KSY++ D+ KIFSEM
Sbjct: 259 YNSLIHVLCLAGKVKDAVIVYEELK-VSGHEPDAFTYRILIQGCCKSYQMEDSTKIFSEM 317
Query: 881 QYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGR 1060
QYNG +TVVYNSLLDG+ K+RK+ EAC LFEKMV DGVRASCWTYNILIDGL KNGR
Sbjct: 318 QYNGFLPDTVVYNSLLDGMFKARKVMEACQLFEKMV-QDGVRASCWTYNILIDGLCKNGR 376
Query: 1061 AEAAYTLFSDLKRKGE 1108
AEA Y LF LK+KG+
Sbjct: 377 AEAGYNLFCGLKKKGQ 392
Score = 75.9 bits (185), Expect = 5e-11
Identities = 31/60 (51%), Positives = 44/60 (73%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
++G+WD ERLMKH+RD NL+P++LKW++ ME S+K P D TPMFPS + EI++
Sbjct: 443 KQGRWDCTERLMKHIRDVNLLPNVLKWRADMEASLKNPPRSREDHTPMFPSTGGLQEIMS 502
>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Vitis vinifera]
Length = 792
Score = 464 bits (1193), Expect = e-128
Identities = 237/380 (62%), Positives = 295/380 (77%), Gaps = 4/380 (1%)
Frame = +2
Query: 2 DSIPLSEDLVLQVLRRGSLDASKKLDFFRWCSVRPNYKHSAGTYSQMFKAICFLPHQHHD 181
+SIP+SE LV+Q+L R S+D +K++FFRWCS R NYKHS G YS +F+ +C + D
Sbjct: 43 ESIPISESLVVQILGRNSIDVFRKVEFFRWCSFRHNYKHSVGAYSHIFRIVCRAGAEFLD 102
Query: 182 DILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVYS 361
+ L++SM+ DGVV+ T KL+LD IR+GK+DSALE+LD++E+ + T L+ VY
Sbjct: 103 QVPLLMSSMKDDGVVVGQETFKLLLDSLIRAGKFDSALEILDHIEE--LGTG-LNSYVYD 159
Query: 362 PVLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIACNELLVGLKKAGMKDEFKQV 541
VLVAL+RKNQ+ +AL +F KLL G V +P++ ACN+LLV L+KA MK EF+ V
Sbjct: 160 SVLVALIRKNQLGLALPLFFKLLGGDE-GQGGVPVPESNACNQLLVALRKADMKIEFRNV 218
Query: 542 FGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEK---SGLFDPDLCTYNSL 712
F KLR K F LD GYNICIH GCWGDL TAL+LFKEMK+K S F PDLCTYNSL
Sbjct: 219 FEKLRAKKDFDLDTQGYNICIHAFGCWGDLGTALNLFKEMKDKSLNSSSFGPDLCTYNSL 278
Query: 713 IHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNG 892
I VLCL+GKV+DALIVWEELKG SGHEPDAFTYRILIQGCSKSYR++DAM+IF+EMQYNG
Sbjct: 279 IRVLCLVGKVKDALIVWEELKG-SGHEPDAFTYRILIQGCSKSYRMDDAMRIFNEMQYNG 337
Query: 893 VRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGRAEAA 1072
+T+VYN+LLDGL K+RK+ EAC +FEKMV +DGVRASCWT+NI+I GL++NGRA A
Sbjct: 338 FCPDTIVYNTLLDGLFKARKVMEACQVFEKMV-EDGVRASCWTHNIVICGLFRNGRAAAG 396
Query: 1073 YTLFSDLKRKGE-VSGIRWS 1129
YTLF DLK+KG+ V GI +S
Sbjct: 397 YTLFCDLKKKGKFVDGITYS 416
Score = 270 bits (690), Expect = 1e-69
Identities = 135/212 (63%), Positives = 161/212 (75%), Gaps = 2/212 (0%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
++G+WD ERLMKH+RDGNLVP++L WK+ ME MK PQS+ +D+TPMFPS +++EI++
Sbjct: 459 KQGRWDWTERLMKHIRDGNLVPNVLNWKANMEAYMKAPQSRRKDYTPMFPSEGNLSEIMS 518
Query: 1282 LPTSADTK--GDVEDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXXKGVRVMA 1455
L +SADT+ G E D+WSSSPYMD LA++ +G RV A
Sbjct: 519 LISSADTEMDGSPGSEEDVAQHEDQWSSSPYMDQLASQLKSIDVSSQLLSLS-RGQRVQA 577
Query: 1456 KDEDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGVDPVSYTYNSIMSSFVKRGYFK 1635
K DSFDIDMVNTYLSIFLAKGKLSLACKLFEIF+NMGVDPV YTYNS+M++FVK+GYF
Sbjct: 578 KGIDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFSNMGVDPVIYTYNSMMTAFVKKGYFN 637
Query: 1636 EAWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
EAWGV H MGE V P DIATYNVIIQGLGKMG
Sbjct: 638 EAWGVFHEMGEKVCPPDIATYNVIIQGLGKMG 669
Score = 75.1 bits (183), Expect = 9e-11
Identities = 89/354 (25%), Positives = 156/354 (44%), Gaps = 25/354 (7%)
Frame = +2
Query: 89 WCSVRPNYKHSAG-TYSQMFKAICFLPHQHHDDILELVASMRRDGVVLDSSTLKLILDGF 265
+C ++ K G TYS + +C ++ L+LV M G V+D T+ +L GF
Sbjct: 400 FCDLKKKGKFVDGITYSIVVLQLC--REGQLEEALQLVEEMEARGFVVDLVTITSLLIGF 457
Query: 266 IRSGKYDSALEVLDYVEKDLINTSCLSPDV---------------YSPVLVALVRKNQI- 397
+ G++D ++ ++ + + L+ Y+P+ + ++I
Sbjct: 458 HKQGRWDWTERLMKHIRDGNLVPNVLNWKANMEAYMKAPQSRRKDYTPMFPSEGNLSEIM 517
Query: 398 SIALSIFLKLLSSSTVGNNVVIIPDAIACN----ELLVGLKKAGMKDEFKQVF-GKLRET 562
S+ S ++ S +V D + + +L LK + + + G+ +
Sbjct: 518 SLISSADTEMDGSPGSEEDVAQHEDQWSSSPYMDQLASQLKSIDVSSQLLSLSRGQRVQA 577
Query: 563 K---LFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVLCLL 733
K F +D N + G LS A LF E+ G+ DP + TYNS++
Sbjct: 578 KGIDSFDIDM--VNTYLSIFLAKGKLSLACKLF-EIFSNMGV-DPVIYTYNSMMTAFVKK 633
Query: 734 GKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAETVV 913
G +A V+ E+ G PD TY ++IQG K R + A + + G + V+
Sbjct: 634 GYFNEAWGVFHEM-GEKVCPPDIATYNVIIQGLGKMGRADLASAVLDMLMKQGGYLDIVM 692
Query: 914 YNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGRAEAAY 1075
YN+L++ L K+ ++ EA LFE+M G+ T+N LI+ K G+ +AAY
Sbjct: 693 YNTLINALGKAGRIDEATKLFEQM-RSSGINPDVVTFNTLIEIHAKAGQLKAAY 745
Score = 60.8 bits (146), Expect = 2e-06
Identities = 47/177 (26%), Positives = 87/177 (49%)
Frame = +2
Query: 350 DVYSPVLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIACNELLVGLKKAGMKDE 529
D+ + L + K ++S+A +F + +N+ + P N ++ K G +E
Sbjct: 586 DMVNTYLSIFLAKGKLSLACKLF-------EIFSNMGVDPVIYTYNSMMTAFVKKGYFNE 638
Query: 530 FKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNS 709
VF ++ E K+ P D YN+ I LG G A ++ + ++ G D + YN+
Sbjct: 639 AWGVFHEMGE-KVCPPDIATYNVIIQGLGKMGRADLASAVLDMLMKQGGYLD--IVMYNT 695
Query: 710 LIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEM 880
LI+ L G++ +A ++E+++ SSG PD T+ LI+ +K+ ++ A K M
Sbjct: 696 LINALGKAGRIDEATKLFEQMR-SSGINPDVVTFNTLIEIHAKAGQLKAAYKFLKLM 751
>gb|EOX95524.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 807
Score = 463 bits (1192), Expect = e-128
Identities = 245/385 (63%), Positives = 301/385 (78%), Gaps = 9/385 (2%)
Frame = +2
Query: 2 DSIPLSEDLVLQVLRRGSLDASKKLDFFRWC-SVRPNYKHSAGTYSQMFKAICFLPHQHH 178
+SIP+SE LV+Q+LR+ SL+ SKKLDFF WC SV+PN+KHSA TYS +F+ +C
Sbjct: 47 NSIPISEPLVIQILRKHSLEPSKKLDFFNWCRSVKPNFKHSAVTYSHIFRTLC--RSGFV 104
Query: 179 DDILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVY 358
+++ L+ +M+ DGV++DS T K +LD FIRSGK+DSALE+LD++E+ + L+ VY
Sbjct: 105 EEVPNLLFAMKEDGVLVDSDTFKFLLDAFIRSGKFDSALEILDFMEE---LGAGLNLRVY 161
Query: 359 SPVLVALVRKNQISIALSIFLKLLSS---STVGNNV-VIIPDAIACNELLVGLKKAGMKD 526
VLVAL+RK+Q+ +ALS+F KLL + + GN+V +P +IA NELLV L+KA M+
Sbjct: 162 DSVLVALIRKDQVGLALSLFFKLLEACNGNDDGNSVDSSLPGSIAINELLVALRKAHMRR 221
Query: 527 EFKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKS---GLFDPDLC 697
EFKQVF LRE + F D GYNICIH+ GCWGDL +L LFKEMKEK G F PDLC
Sbjct: 222 EFKQVFDILREKREFEFDTCGYNICIHSFGCWGDLGASLKLFKEMKEKEKSFGSFGPDLC 281
Query: 698 TYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSE 877
TYNSLI VLCL+GKV+DAL+VWEELK SGHEPDAFTYRILIQGCSKSYR++DA KIFSE
Sbjct: 282 TYNSLIDVLCLVGKVKDALVVWEELK-VSGHEPDAFTYRILIQGCSKSYRMDDATKIFSE 340
Query: 878 MQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNG 1057
MQYNG +TVVYNSLL+GL K+RK+ EAC FEKMV DGVRASCWTYNILIDGL++NG
Sbjct: 341 MQYNGFAMDTVVYNSLLNGLFKARKVMEACQFFEKMV-QDGVRASCWTYNILIDGLFRNG 399
Query: 1058 RAEAAYTLFSDLKRKGE-VSGIRWS 1129
RAEAAYTLF DLK+KG+ V GI +S
Sbjct: 400 RAEAAYTLFCDLKKKGQFVDGITYS 424
Score = 263 bits (671), Expect = 2e-67
Identities = 135/219 (61%), Positives = 162/219 (73%), Gaps = 9/219 (4%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
++G+WD ERLMKH+RDGNLVP++LKWK+ ME SMK P +D+TP+FPS D EI+N
Sbjct: 467 KQGRWDWTERLMKHIRDGNLVPNVLKWKANMEASMKNPPKNRKDYTPLFPSKGDFREIMN 526
Query: 1282 L--------PTSADTKG-DVEDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXX 1434
L T+ D++ D +D E+ +TD+WSSSPYMD LAN+
Sbjct: 527 LLGSVGQAMGTNLDSEDCDEKDQEKPSIDTDQWSSSPYMDQLANQGKSTERSSQLFSLI- 585
Query: 1435 KGVRVMAKDEDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGVDPVSYTYNSIMSSF 1614
+G RV K SFD+DMVNT+LSIFLAKGKLSLACKLFE+FT+MGVDPVSYTYNSIMSSF
Sbjct: 586 RGQRVQEKGIGSFDVDMVNTFLSIFLAKGKLSLACKLFEVFTDMGVDPVSYTYNSIMSSF 645
Query: 1615 VKRGYFKEAWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
VK+GYF EAWGVL+ M E V PADIATYN+IIQGLGKMG
Sbjct: 646 VKKGYFNEAWGVLNEMDEKVCPADIATYNLIIQGLGKMG 684
Score = 66.6 bits (161), Expect = 3e-08
Identities = 54/198 (27%), Positives = 100/198 (50%)
Frame = +2
Query: 350 DVYSPVLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIACNELLVGLKKAGMKDE 529
D+ + L + K ++S+A +F V ++ + P + N ++ K G +E
Sbjct: 601 DMVNTFLSIFLAKGKLSLACKLF-------EVFTDMGVDPVSYTYNSIMSSFVKKGYFNE 653
Query: 530 FKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNS 709
V ++ E K+ P D YN+ I LG G A S+ ++ ++ G D+ YN+
Sbjct: 654 AWGVLNEMDE-KVCPADIATYNLIIQGLGKMGRADIASSVLDKLMKQGGYL--DVVMYNT 710
Query: 710 LIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYN 889
L++ L G+V +A ++E+++ +SG PD TY LI+ +K+ ++ DA K F +M +
Sbjct: 711 LVNALGKAGRVDEASKLFEQMR-TSGINPDVITYNTLIEVHTKAGQLQDAYK-FLKMMLD 768
Query: 890 GVRAETVVYNSLLDGLLK 943
+ V +++LD L K
Sbjct: 769 AGCSPNHVTDTILDNLGK 786
Score = 66.2 bits (160), Expect = 4e-08
Identities = 90/382 (23%), Positives = 153/382 (40%), Gaps = 32/382 (8%)
Frame = +2
Query: 26 LVLQVLRRGSLDASKKLDFFRWCSVRPNYKHSAG-TYSQMFKAICFLPHQHHDDILELVA 202
L+ + R G +A+ L +C ++ + G TYS + +C + L LV
Sbjct: 391 LIDGLFRNGRAEAAYTL----FCDLKKKGQFVDGITYSIVVLQLC--REGQLEGALRLVE 444
Query: 203 SMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVYSPVLVALV 382
M G ++D T+ +L GF + G++D ++ ++ + + L +
Sbjct: 445 EMEARGFIVDLVTITSLLIGFHKQGRWDWTERLMKHIRDGNLVPNVLKWKANMEASMKNP 504
Query: 383 RKNQISIA--------LSIFLKLLSS--STVGNNV-------------VIIPDAIACNEL 493
KN+ + LL S +G N+ I D + +
Sbjct: 505 PKNRKDYTPLFPSKGDFREIMNLLGSVGQAMGTNLDSEDCDEKDQEKPSIDTDQWSSSPY 564
Query: 494 LVGLKKAGMKDE-FKQVFGKLRETKL-------FPLDRWGYNICIHTLGCWGDLSTALSL 649
+ L G E Q+F +R ++ F +D N + G LS A L
Sbjct: 565 MDQLANQGKSTERSSQLFSLIRGQRVQEKGIGSFDVDM--VNTFLSIFLAKGKLSLACKL 622
Query: 650 FKEMKEKSGLFDPDLCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQG 829
F+ + DP TYNS++ G +A V E+ D TY ++IQG
Sbjct: 623 FEVFTDMG--VDPVSYTYNSIMSSFVKKGYFNEAWGVLNEMD-EKVCPADIATYNLIIQG 679
Query: 830 CSKSYRINDAMKIFSEMQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRA 1009
K R + A + ++ G + V+YN+L++ L K+ ++ EA LFE+M G+
Sbjct: 680 LGKMGRADIASSVLDKLMKQGGYLDVVMYNTLVNALGKAGRVDEASKLFEQM-RTSGINP 738
Query: 1010 SCWTYNILIDGLYKNGRAEAAY 1075
TYN LI+ K G+ + AY
Sbjct: 739 DVITYNTLIEVHTKAGQLQDAY 760
Score = 60.8 bits (146), Expect = 2e-06
Identities = 37/134 (27%), Positives = 69/134 (51%)
Frame = +2
Query: 590 YNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVLCLLGKVRDALIVWEE 769
YN + + G + A + EM EK + D+ TYN +I L +G+ A V ++
Sbjct: 638 YNSIMSSFVKKGYFNEAWGVLNEMDEK--VCPADIATYNLIIQGLGKMGRADIASSVLDK 695
Query: 770 LKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAETVVYNSLLDGLLKSR 949
L G+ D Y L+ K+ R+++A K+F +M+ +G+ + + YN+L++ K+
Sbjct: 696 LMKQGGYL-DVVMYNTLVNALGKAGRVDEASKLFEQMRTSGINPDVITYNTLIEVHTKAG 754
Query: 950 KLTEACNLFEKMVD 991
+L +A + M+D
Sbjct: 755 QLQDAYKFLKMMLD 768
>ref|XP_006396354.1| hypothetical protein EUTSA_v10028437mg [Eutrema salsugineum]
gi|557097371|gb|ESQ37807.1| hypothetical protein
EUTSA_v10028437mg [Eutrema salsugineum]
Length = 801
Score = 459 bits (1180), Expect = e-126
Identities = 240/379 (63%), Positives = 288/379 (75%), Gaps = 10/379 (2%)
Frame = +2
Query: 2 DSIPLSEDLVLQVLRRGSLDASKKLDFFRWC-SVRPNYKHSAGTYSQMFKAICFLPHQHH 178
+S P+SE +VLQ+LRR SLD SKKLDFFRWC S+RP YKHSA YSQ+F+ +C
Sbjct: 51 NSTPISEPIVLQILRRNSLDPSKKLDFFRWCFSLRPGYKHSASAYSQIFRTVCRTGLL-- 108
Query: 179 DDILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVY 358
+I L+ SM+ DGV LD +T KL+LD IRSGKYDSAL VLDY+E+ CL+P +Y
Sbjct: 109 GEIPNLLGSMKEDGVNLDQTTSKLLLDSLIRSGKYDSALGVLDYMEE---LGGCLNPRLY 165
Query: 359 SPVLVALVRKNQISIALSIFLKLLSSS-----TVGNNVVIIPDAIACNELLVGLKKAGMK 523
VL+ALV+KN++ +ALSIF KLL +S T G +V +P +A NELLVGL+KA MK
Sbjct: 166 DSVLIALVKKNELRLALSIFFKLLEASDNPSETGGVSVSYLPGTVAVNELLVGLRKANMK 225
Query: 524 DEFKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFD----PD 691
EFK VF KL+ + F D WGYNICIH GCWGDL ALSLFKEMKE+S + PD
Sbjct: 226 LEFKGVFDKLKGMERFKFDTWGYNICIHGFGCWGDLDAALSLFKEMKEQSSISGSCAGPD 285
Query: 692 LCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIF 871
+CTYNSLIHVLCL+GK +DALIVW+ELK SGHEPD TYRILIQGC KSY ++DAM+IF
Sbjct: 286 ICTYNSLIHVLCLVGKAKDALIVWDELK-VSGHEPDNSTYRILIQGCCKSYLMDDAMRIF 344
Query: 872 SEMQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYK 1051
EMQYNG +TV+YNSLLDG LK+RK+ EAC LFEKMV +GVRASCWT NILIDGL++
Sbjct: 345 GEMQYNGFVPDTVLYNSLLDGTLKARKVVEACQLFEKMV-QEGVRASCWTNNILIDGLFR 403
Query: 1052 NGRAEAAYTLFSDLKRKGE 1108
NGRAEA +TLF DLK+KG+
Sbjct: 404 NGRAEAGFTLFCDLKKKGQ 422
Score = 226 bits (577), Expect = 2e-56
Identities = 122/211 (57%), Positives = 148/211 (70%), Gaps = 1/211 (0%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
++G+WD E+LMKHVR GNLVP++L+W + +E S+K PQSK +D+TPMFPS +I++
Sbjct: 473 KQGRWDWKEKLMKHVRGGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFVDIMS 532
Query: 1282 LPTSADTKGDVEDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXXKGVRVMAKD 1461
L S D E+ E D WSSSPYMD LA++ +G RV AK
Sbjct: 533 LVGSKDDGAKAEELTPV--EDDPWSSSPYMDQLAHQ----SNQPKPLFALARGQRVEAK- 585
Query: 1462 EDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGV-DPVSYTYNSIMSSFVKRGYFKE 1638
DSFD+DM+NT+LSI+L+KG LSLACKLFEIF MGV D SYTYNS+MSSFVK+GYFK
Sbjct: 586 PDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNEMGVTDLTSYTYNSMMSSFVKKGYFKT 645
Query: 1639 AWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
A GVL MGE ADIATYNVIIQGLGKMG
Sbjct: 646 ARGVLDQMGENFCAADIATYNVIIQGLGKMG 676
Score = 70.1 bits (170), Expect = 3e-09
Identities = 49/151 (32%), Positives = 77/151 (50%)
Frame = +2
Query: 623 GDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDA 802
GDLS A LF E+ + G+ D TYNS++ G + A V +++ G + D
Sbjct: 605 GDLSLACKLF-EIFNEMGVTDLTSYTYNSMMSSFVKKGYFKTARGVLDQM-GENFCAADI 662
Query: 803 FTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEK 982
TY ++IQG K R + A + + G + V+YN+L++ L K+ +L EA LFE
Sbjct: 663 ATYNVIIQGLGKMGRADLASAVLDRLTEQGGYLDIVMYNTLINALGKANRLDEATRLFEH 722
Query: 983 MVDDDGVRASCWTYNILIDGLYKNGRAEAAY 1075
M G+ +YN +I+ K G+ + AY
Sbjct: 723 M-KSSGINPDVVSYNTMIEVNSKAGKLKEAY 752
Score = 60.5 bits (145), Expect = 2e-06
Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 1/264 (0%)
Frame = +2
Query: 329 NTSCLSPDVYSPVLVALVRKNQISIALSI-FLKLLSSSTVGNNVVIIPDAIACNELLVGL 505
N S + P+++ ++R+N + + + F + S G A A +++ +
Sbjct: 47 NLDANSTPISEPIVLQILRRNSLDPSKKLDFFRWCFSLRPGYK----HSASAYSQIFRTV 102
Query: 506 KKAGMKDEFKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFD 685
+ G+ E + G ++E + LD+ + + +L G +AL + M+E G +
Sbjct: 103 CRTGLLGEIPNLLGSMKEDGV-NLDQTTSKLLLDSLIRSGKYDSALGVLDYMEELGGCLN 161
Query: 686 PDLCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMK 865
P L Y+S++ L ++R AL ++ +L +S + + G S SY
Sbjct: 162 PRL--YDSVLIALVKKNELRLALSIFFKLLEASDNPSET-------GGVSVSYLPG---- 208
Query: 866 IFSEMQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGL 1045
TV N LL GL K+ E +F+K+ + + W YNI I G
Sbjct: 209 -------------TVAVNELLVGLRKANMKLEFKGVFDKLKGMERFKFDTWGYNICIHGF 255
Query: 1046 YKNGRAEAAYTLFSDLKRKGEVSG 1117
G +AA +LF ++K + +SG
Sbjct: 256 GCWGDLDAALSLFKEMKEQSSISG 279
Score = 58.5 bits (140), Expect = 9e-06
Identities = 41/152 (26%), Positives = 72/152 (47%)
Frame = +2
Query: 536 QVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNSLI 715
++F E + L + YN + + G TA + +M E D+ TYN +I
Sbjct: 612 KLFEIFNEMGVTDLTSYTYNSMMSSFVKKGYFKTARGVLDQMGEN--FCAADIATYNVII 669
Query: 716 HVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGV 895
L +G+ A V + L G+ D Y LI K+ R+++A ++F M+ +G+
Sbjct: 670 QGLGKMGRADLASAVLDRLTEQGGYL-DIVMYNTLINALGKANRLDEATRLFEHMKSSGI 728
Query: 896 RAETVVYNSLLDGLLKSRKLTEACNLFEKMVD 991
+ V YN++++ K+ KL EA + M+D
Sbjct: 729 NPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLD 760
>gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]
Length = 508
Score = 454 bits (1169), Expect = e-125
Identities = 232/382 (60%), Positives = 290/382 (75%), Gaps = 13/382 (3%)
Frame = +2
Query: 2 DSIPLSEDLVLQVLRRGSLDASKKLDFFRWC-SVRPNYKHSAGTYSQMFKAICFLPHQHH 178
+SIP+SE +VLQ+LRR S+D SKKLDFFRWC S+RP YKHSA YSQ+F+ +C
Sbjct: 51 NSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLL-- 108
Query: 179 DDILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVY 358
++ +L+ SM+ DGV LD + K++LD IRSGK++SAL VLDY+E+ CL+P VY
Sbjct: 109 GEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEE---LGDCLNPSVY 165
Query: 359 SPVLVALVRKNQISIALSIFLKLLSSST------VGNNVVI--IPDAIACNELLVGLKKA 514
VL+ALV+K+++ +ALSI KLL +S G +++ +P +A NELLVGL++A
Sbjct: 166 DSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRA 225
Query: 515 GMKDEFKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGL----F 682
M+ EFK+VF KL+ K F D W YNICIH GCWGDL ALSLFKEMKE+S + F
Sbjct: 226 DMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSF 285
Query: 683 DPDLCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAM 862
PD+CTYNSLIHVLCL GK +DALIVW+ELK SGHEPD TYRILIQGC KSYR++DAM
Sbjct: 286 GPDICTYNSLIHVLCLFGKAKDALIVWDELK-VSGHEPDNSTYRILIQGCCKSYRMDDAM 344
Query: 863 KIFSEMQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDG 1042
+I+ EMQYNG +T+VYN LLDG LK+RK+TEAC LFEKMV +GVRASCWTYNILIDG
Sbjct: 345 RIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV-QEGVRASCWTYNILIDG 403
Query: 1043 LYKNGRAEAAYTLFSDLKRKGE 1108
L++NGRAEA +TLF DLK+KG+
Sbjct: 404 LFRNGRAEAGFTLFCDLKKKGQ 425
>ref|NP_192066.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75161629|sp|Q8VZE4.1|PP299_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g01570 gi|18086402|gb|AAL57659.1| AT4g01570/T15B16_21
[Arabidopsis thaliana] gi|24797024|gb|AAN64524.1|
At4g01570/T15B16_21 [Arabidopsis thaliana]
gi|332656643|gb|AEE82043.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 805
Score = 454 bits (1169), Expect = e-125
Identities = 232/382 (60%), Positives = 290/382 (75%), Gaps = 13/382 (3%)
Frame = +2
Query: 2 DSIPLSEDLVLQVLRRGSLDASKKLDFFRWC-SVRPNYKHSAGTYSQMFKAICFLPHQHH 178
+SIP+SE +VLQ+LRR S+D SKKLDFFRWC S+RP YKHSA YSQ+F+ +C
Sbjct: 51 NSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLL-- 108
Query: 179 DDILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVY 358
++ +L+ SM+ DGV LD + K++LD IRSGK++SAL VLDY+E+ CL+P VY
Sbjct: 109 GEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEE---LGDCLNPSVY 165
Query: 359 SPVLVALVRKNQISIALSIFLKLLSSST------VGNNVVI--IPDAIACNELLVGLKKA 514
VL+ALV+K+++ +ALSI KLL +S G +++ +P +A NELLVGL++A
Sbjct: 166 DSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRA 225
Query: 515 GMKDEFKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGL----F 682
M+ EFK+VF KL+ K F D W YNICIH GCWGDL ALSLFKEMKE+S + F
Sbjct: 226 DMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSF 285
Query: 683 DPDLCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAM 862
PD+CTYNSLIHVLCL GK +DALIVW+ELK SGHEPD TYRILIQGC KSYR++DAM
Sbjct: 286 GPDICTYNSLIHVLCLFGKAKDALIVWDELK-VSGHEPDNSTYRILIQGCCKSYRMDDAM 344
Query: 863 KIFSEMQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDG 1042
+I+ EMQYNG +T+VYN LLDG LK+RK+TEAC LFEKMV +GVRASCWTYNILIDG
Sbjct: 345 RIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV-QEGVRASCWTYNILIDG 403
Query: 1043 LYKNGRAEAAYTLFSDLKRKGE 1108
L++NGRAEA +TLF DLK+KG+
Sbjct: 404 LFRNGRAEAGFTLFCDLKKKGQ 425
Score = 223 bits (567), Expect = 3e-55
Identities = 118/211 (55%), Positives = 148/211 (70%), Gaps = 1/211 (0%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
++G+WD E+LMKH+R+GNLVP++L+W + +E S+K PQSK +D+TPMFPS +I++
Sbjct: 476 KQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMS 535
Query: 1282 LPTSADTKGDVEDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXXKGVRVMAKD 1461
+ S D E+ E D WSSSPYMD LA++ +G RV AK
Sbjct: 536 MVGSEDDGASAEEVSPM--EDDPWSSSPYMDQLAHQ----RNQPKPLFGLARGQRVEAK- 588
Query: 1462 EDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGV-DPVSYTYNSIMSSFVKRGYFKE 1638
DSFD+DM+NT+LSI+L+KG LSLACKLFEIF MGV D SYTYNS+MSSFVK+GYF+
Sbjct: 589 PDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQT 648
Query: 1639 AWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
A GVL M E ADIATYNVIIQGLGKMG
Sbjct: 649 ARGVLDQMFENFCAADIATYNVIIQGLGKMG 679
Score = 58.5 bits (140), Expect = 9e-06
Identities = 40/139 (28%), Positives = 67/139 (48%)
Frame = +2
Query: 575 LDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVLCLLGKVRDAL 754
L + YN + + G TA + +M E D+ TYN +I L +G+ A
Sbjct: 628 LTSYTYNSMMSSFVKKGYFQTARGVLDQMFEN--FCAADIATYNVIIQGLGKMGRADLAS 685
Query: 755 IVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAETVVYNSLLDG 934
V + L G+ D Y LI K+ R+++A ++F M+ NG+ + V YN++++
Sbjct: 686 AVLDRLTKQGGYL-DIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEV 744
Query: 935 LLKSRKLTEACNLFEKMVD 991
K+ KL EA + M+D
Sbjct: 745 NSKAGKLKEAYKYLKAMLD 763
>ref|XP_006444679.1| hypothetical protein CICLE_v10023806mg [Citrus clementina]
gi|557546941|gb|ESR57919.1| hypothetical protein
CICLE_v10023806mg [Citrus clementina]
Length = 619
Score = 454 bits (1168), Expect = e-125
Identities = 245/384 (63%), Positives = 303/384 (78%), Gaps = 9/384 (2%)
Frame = +2
Query: 5 SIPLSEDLVLQVLRRGSLDASKKLDFFRWCS-VRPNYKHSAGTYSQMFKAIC---FLPHQ 172
SIP+SE LVLQVL + SLD+SKKLDFFRWCS +RP YKH+A TYS +F+ +C FL
Sbjct: 44 SIPISEPLVLQVLGKNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFL--- 100
Query: 173 HHDDILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPD 352
+++ L+ SM+ D VV+DS T KL+L+ I+SGK D A+E+LDY+E+ + TS LSP+
Sbjct: 101 --EEVPSLLNSMQEDDVVVDSETFKLLLEACIKSGKIDFAIEILDYMEE--LGTS-LSPN 155
Query: 353 VYSPVLVALVRKNQISIALSIFLKLLSS---STVGNNVV-IIPDAIACNELLVGLKKAGM 520
VY VLV+LVRK Q+ +A+SI KLL + +T N+VV +P +ACNELLV L+K+
Sbjct: 156 VYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDR 215
Query: 521 KDEFKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCT 700
+ EFKQVF +L+E K F D +GYNICIH GCWGDL T+L LFKEMKEK GL PDL T
Sbjct: 216 RSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK-GLV-PDLHT 273
Query: 701 YNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEM 880
YNSLI VLC++GKV+DALIVWEELKGS GHEP+ FT+RI+IQGC KSYR++DAMKIFSEM
Sbjct: 274 YNSLIQVLCVVGKVKDALIVWEELKGS-GHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEM 332
Query: 881 QYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGR 1060
QYNG+ +TVVYNSLL+G+ KSRK+ EAC LFEKMV DGVR SCWT+NILIDGL++NGR
Sbjct: 333 QYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMV-QDGVRTSCWTHNILIDGLFRNGR 391
Query: 1061 AEAAYTLFSDLKRKGE-VSGIRWS 1129
AEAAYTLF DLK+KG+ V GI +S
Sbjct: 392 AEAAYTLFCDLKKKGKFVDGITFS 415
Score = 124 bits (311), Expect = 1e-25
Identities = 58/74 (78%), Positives = 66/74 (89%)
Frame = +1
Query: 1510 LAKGKLSLACKLFEIFTNMGVDPVSYTYNSIMSSFVKRGYFKEAWGVLHAMGETVNPADI 1689
L KGKL+LACKLFEIFT+MGV PV+YTYNS+MSSFVK+GYF +AWGVL+ MGE P DI
Sbjct: 431 LPKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDI 490
Query: 1690 ATYNVIIQGLGKMG 1731
ATYNV+IQGLGKMG
Sbjct: 491 ATYNVVIQGLGKMG 504
Score = 77.0 bits (188), Expect = 2e-11
Identities = 77/316 (24%), Positives = 135/316 (42%), Gaps = 10/316 (3%)
Frame = +2
Query: 188 LELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVYSP- 364
L L M+ G+V D T ++ GK AL V + ++ S P+ ++
Sbjct: 256 LRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKG-----SGHEPNEFTHR 310
Query: 365 -VLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIACNELLVGLKKAGMKDEFKQV 541
++ + ++ A+ IF ++ + +IPD + N LL G+ K+ E Q+
Sbjct: 311 IIIQGCCKSYRMDDAMKIFSEMQYNG-------LIPDTVVYNSLLNGMFKSRKVMEACQL 363
Query: 542 FGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHV 721
F K+ + + W +NI I L G A +LF ++K+K D T++ ++
Sbjct: 364 FEKMVQDGV-RTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDG--ITFSIVVLQ 420
Query: 722 LCLLGKVRDALIVWE--------ELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSE 877
LC G++ +AL + E+ G P +TY ++ K N A + +E
Sbjct: 421 LCREGQIEEALPKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNE 480
Query: 878 MQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNG 1057
M + YN ++ GL K + A + +K++ G YN LI+ L K G
Sbjct: 481 MGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAG 540
Query: 1058 RAEAAYTLFSDLKRKG 1105
R + A LF ++ G
Sbjct: 541 RFDEANMLFEQMRTSG 556
Score = 67.0 bits (162), Expect = 2e-08
Identities = 81/327 (24%), Positives = 145/327 (44%), Gaps = 11/327 (3%)
Frame = +2
Query: 128 TYSQMFKAICFLPHQHHDDILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLD 307
TY+ + + +C + D L + ++ G + T ++I+ G +S + D A+++
Sbjct: 273 TYNSLIQVLCVVGKVK--DALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFS 330
Query: 308 YVEKDLINTSCLSPD--VYSPVLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIA 481
++ + L PD VY+ +L + + ++ A +F K++ +
Sbjct: 331 EMQYN-----GLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDG-------VRTSCWT 378
Query: 482 CNELLVGLKKAGMKDEFKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEM 661
N L+ GL + G + +F L++ F +D ++I + L G + AL K +
Sbjct: 379 HNILIDGLFRNGRAEAAYTLFCDLKKKGKF-VDGITFSIVVLQLCREGQIEEALPKGK-L 436
Query: 662 KEKSGLFD--------PDLCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRI 817
LF+ P TYNS++ G A V E+ G D TY +
Sbjct: 437 NLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEM-GEKFCPTDIATYNV 495
Query: 818 LIQGCSKSYRINDAMKIFSE-MQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDD 994
+IQG K R + A I + M+ G + V+YN+L++ L K+ + EA LFE+M
Sbjct: 496 VIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQM-RT 554
Query: 995 DGVRASCWTYNILIDGLYKNGRAEAAY 1075
G+ T+N LI+ K GR + A+
Sbjct: 555 SGINPDVVTFNTLIEVNGKAGRLKEAH 581
>ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297320808|gb|EFH51230.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 802
Score = 454 bits (1167), Expect = e-125
Identities = 233/380 (61%), Positives = 285/380 (75%), Gaps = 11/380 (2%)
Frame = +2
Query: 2 DSIPLSEDLVLQVLRRGSLDASKKLDFFRWC-SVRPNYKHSAGTYSQMFKAICFLPHQHH 178
+SIP+SE +VLQ+LRR S+D SKKLDFFRWC S+R YKHS YSQ+F+ +C
Sbjct: 51 NSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRTGYKHSVSAYSQIFRTVCRTGLL-- 108
Query: 179 DDILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVY 358
++ +L+ SM+ DGV LD + K++LD IRSGK++SAL VLDY+E+ CL+P +Y
Sbjct: 109 GEVPDLLCSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEE---LGDCLNPSLY 165
Query: 359 SPVLVALVRKNQISIALSIFLKLLSSS------TVGNNVVIIPDAIACNELLVGLKKAGM 520
VL+AL +KN++ +ALSIF KLL +S T G V +P +A NELLVGL++A M
Sbjct: 166 DSVLIALAKKNELRLALSIFFKLLEASDNHGDDTSGVTVSYLPGRVAVNELLVGLRRADM 225
Query: 521 KDEFKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGL----FDP 688
+ EFK VF KL+ F D W YNICIH GCWGDL ALSLFKEMKE+S + F P
Sbjct: 226 RSEFKTVFEKLKGMNRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVSGSSFAP 285
Query: 689 DLCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKI 868
D+CTYNSLIHVLCL GK +DALIVW+ELK SGHEPD TYRILIQGC KSYR++DAM+I
Sbjct: 286 DICTYNSLIHVLCLFGKAKDALIVWDELK-VSGHEPDNSTYRILIQGCCKSYRMDDAMRI 344
Query: 869 FSEMQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLY 1048
F EMQYNG +TVVYN LLDG LK+RK+TEAC LFEKMV +GVRASCWTYNILIDGL+
Sbjct: 345 FGEMQYNGFVPDTVVYNCLLDGTLKARKVTEACQLFEKMV-QEGVRASCWTYNILIDGLF 403
Query: 1049 KNGRAEAAYTLFSDLKRKGE 1108
+NGRAEA +TLF DLK+KG+
Sbjct: 404 RNGRAEAGFTLFCDLKKKGQ 423
Score = 221 bits (563), Expect = 8e-55
Identities = 118/211 (55%), Positives = 146/211 (69%), Gaps = 1/211 (0%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
++G+WD E+LMKHVR+GNLVP++L+W + +E S+K PQ K +D+TPMFPS +I++
Sbjct: 474 KQGRWDWKEKLMKHVREGNLVPNVLRWNAGVEASLKRPQRKDKDYTPMFPSKGSFLDIMS 533
Query: 1282 LPTSADTKGDVEDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXXKGVRVMAKD 1461
+ D E+ E D WSSSPYMD LA++ +G RV AK
Sbjct: 534 MVGLEDDGARAEEVPPM--EDDPWSSSPYMDQLAHQSNRPKPLFGLA----RGQRVEAKP 587
Query: 1462 EDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGV-DPVSYTYNSIMSSFVKRGYFKE 1638
DSFD+DM+NT+LSI+L+KG LSLACKLFEIF MGV D SYTYNS+MSSFVK+GYFK
Sbjct: 588 -DSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFKT 646
Query: 1639 AWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
GVL MGE ADIATYNVIIQGLGKMG
Sbjct: 647 VRGVLDQMGENFCAADIATYNVIIQGLGKMG 677
>ref|XP_006491416.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570-like
[Citrus sinensis]
Length = 790
Score = 450 bits (1158), Expect = e-124
Identities = 244/384 (63%), Positives = 302/384 (78%), Gaps = 9/384 (2%)
Frame = +2
Query: 5 SIPLSEDLVLQVLRRGSLDASKKLDFFRWCS-VRPNYKHSAGTYSQMFKAIC---FLPHQ 172
SIP+SE LVLQVL + SLD+SKKLDFFRWCS +RP YKH+A TYS +F+ +C FL
Sbjct: 44 SIPISEPLVLQVLGKNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFL--- 100
Query: 173 HHDDILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPD 352
+++ L+ SM+ D VV+DS T KL+L+ I+SGK D A+E+LDY+E+ + TS LSP+
Sbjct: 101 --EEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEE--LGTS-LSPN 155
Query: 353 VYSPVLVALVRKNQISIALSIFLKLLSS---STVGNNVV-IIPDAIACNELLVGLKKAGM 520
VY VLV+LVRK Q+ +A+SI KLL + +T N+VV +P +ACNELLV L+K+
Sbjct: 156 VYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDR 215
Query: 521 KDEFKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCT 700
+ EFKQVF +L+E K F D +GYNICIH GCWGDL T+L LFKEMKEK GL PDL T
Sbjct: 216 RSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK-GLV-PDLHT 273
Query: 701 YNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEM 880
YNSLI VLC++GKV+DALIVWEELKGS GHEP+ FT+RI+IQGC KSYR++DAMKIFSEM
Sbjct: 274 YNSLIQVLCVVGKVKDALIVWEELKGS-GHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEM 332
Query: 881 QYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGR 1060
QYNG+ +TVVYNSLL+ + KSRK+ EAC LFEKMV DGVR SCWT+NILIDGL++NGR
Sbjct: 333 QYNGLIPDTVVYNSLLNRMFKSRKVMEACQLFEKMV-QDGVRTSCWTHNILIDGLFRNGR 391
Query: 1061 AEAAYTLFSDLKRKGE-VSGIRWS 1129
AEAAYTLF DLK+KG+ V GI +S
Sbjct: 392 AEAAYTLFCDLKKKGKFVDGITFS 415
Score = 246 bits (629), Expect = 2e-62
Identities = 127/217 (58%), Positives = 157/217 (72%), Gaps = 9/217 (4%)
Frame = +1
Query: 1108 GQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEIL--- 1278
G+WD ERLMKH+RDGNLV +LKWK+ +E +MK +SK +D+TPMFP D++EI+
Sbjct: 460 GRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLI 519
Query: 1279 ---NLPTSADT---KGDVEDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXXKG 1440
NL T A+ +GD +D +DEWSSSPYMD LA++ +G
Sbjct: 520 GSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLA-RG 578
Query: 1441 VRVMAKDEDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGVDPVSYTYNSIMSSFVK 1620
+RV K +FDIDMVNT+LSIFLAKGKL+LACKLFEIFT+MGV PV+YTYNS+MSSFVK
Sbjct: 579 LRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVK 638
Query: 1621 RGYFKEAWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
+GYF +AWGVL+ MGE P DIATYNV+IQGLGKMG
Sbjct: 639 KGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMG 675
>ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570-like
[Cucumis sativus] gi|449523383|ref|XP_004168703.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
Length = 803
Score = 448 bits (1153), Expect = e-123
Identities = 231/379 (60%), Positives = 291/379 (76%), Gaps = 10/379 (2%)
Frame = +2
Query: 5 SIPLSEDLVLQVLRRGSLDASKKLDFFRWCSVRPNYKHSAGTYSQMFKAICFLPHQHHDD 184
S+P+S L+LQ+L SL+ S KLDFF+WCS+ PN+ HS TYSQ+F +C + H +
Sbjct: 51 SLPISHPLLLQILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYLH--E 108
Query: 185 ILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVYSP 364
+ L+ SM+RDGV +DS T K++LD FIRSGKYD+ALE+LD++E + TS L + Y+
Sbjct: 109 VPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHMED--LGTS-LELNTYNS 165
Query: 365 VLVALVRKNQISIALSIFLKLLSSSTVGNNVV-------IIPDAIACNELLVGLKKAGMK 523
VLVAL+RKNQ+ +ALSIF KLL G V +P+++ACNELLV L+K M+
Sbjct: 166 VLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMR 225
Query: 524 DEFKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGL---FDPDL 694
EFK+VF KLR + F +GYNICI+ GCWG L TALSLFKEMKEKS + F PDL
Sbjct: 226 VEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDL 285
Query: 695 CTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFS 874
CTYNS+IHVLCL+GKV+DALIVWEELKGS GHEPDAFTYRI+IQGC KS R++DA IF+
Sbjct: 286 CTYNSIIHVLCLVGKVKDALIVWEELKGS-GHEPDAFTYRIIIQGCCKSCRMDDATMIFN 344
Query: 875 EMQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKN 1054
EM+YNG+ +T+VYNSLL+GL K+RK+TEAC LF+KMV +D VRAS WTYNILIDGL++N
Sbjct: 345 EMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQED-VRASPWTYNILIDGLFRN 403
Query: 1055 GRAEAAYTLFSDLKRKGEV 1111
GRAEA YTLF DLK+KG++
Sbjct: 404 GRAEAGYTLFCDLKKKGQI 422
Score = 235 bits (600), Expect = 4e-59
Identities = 117/214 (54%), Positives = 160/214 (74%), Gaps = 4/214 (1%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
++GQWD +ERLMKH+R+G+LVP++LKWK ME S+K ++K +DF+ +F D++E+++
Sbjct: 472 KQGQWDGLERLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSSLFSPKEDLSEVIS 531
Query: 1282 LPTSADTKGDV----EDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXXKGVRV 1449
S+ K ++ E+TE+ + D WSSSPY++ LAN +G R+
Sbjct: 532 SRASSAAKVNIDNSFENTEE--RDMDSWSSSPYVNRLAN-LANSTSDILQPFSIRQGRRI 588
Query: 1450 MAKDEDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGVDPVSYTYNSIMSSFVKRGY 1629
K ++SFDI+MVNT+LSIFLAKGKL+LACKLFEIF++MGV+PV YTYNS++SSFVK+GY
Sbjct: 589 QEKQDNSFDINMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGY 648
Query: 1630 FKEAWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
F +AWG+ + MGE V PADIATYNVIIQGLGKMG
Sbjct: 649 FHQAWGIFNEMGENVCPADIATYNVIIQGLGKMG 682
Score = 60.1 bits (144), Expect = 3e-06
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 6/185 (3%)
Frame = +2
Query: 389 NQISIALSIFLK------LLSSSTVGNNVVIIPDAIACNELLVGLKKAGMKDEFKQVFGK 550
N ++ LSIFL + +++ + P N +L K G + +F +
Sbjct: 599 NMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNE 658
Query: 551 LRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVLCL 730
+ E + P D YN+ I LG G A S+ +++ E+ G D+ YN+LI+ L
Sbjct: 659 MGEN-VCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYL--DIVMYNTLINALGK 715
Query: 731 LGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAETV 910
G++ D ++ +++ +SG PD T+ LI+ SK+ R+ DA K M +G V
Sbjct: 716 AGRMDDVNKLFGQMR-NSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHV 774
Query: 911 VYNSL 925
+L
Sbjct: 775 TDTTL 779
>ref|XP_002515124.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545604|gb|EEF47108.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 898
Score = 439 bits (1130), Expect = e-120
Identities = 233/380 (61%), Positives = 283/380 (74%), Gaps = 4/380 (1%)
Frame = +2
Query: 2 DSIPLSEDLVLQVLRRGSLDASKKLDFFRWCSVRPNYKHSAGTYSQMFKAICFLPHQHHD 181
D IPLSE L+LQ+LR+ SLDASKK++FF+WCS NYKHSA YS MF+ +C + +
Sbjct: 73 DFIPLSEPLILQILRQNSLDASKKIEFFKWCSFSHNYKHSACVYSHMFRTVCNAGY--FE 130
Query: 182 DILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVYS 361
++ L+ SM+ D ++ + T K +LD FI G +D ALE+LD +E+ N L+P +Y
Sbjct: 131 EVRSLLNSMKDDCAIVGTGTFKFLLDTFINLGNFDFALELLDVMEELGTN---LNPHMYD 187
Query: 362 PVLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIACNELLVGLKKAGMKDEFKQV 541
VLVAL RKNQI +ALSIF KLL +S + V +P ++ACN LLV L+KA M+ EFK+V
Sbjct: 188 SVLVALTRKNQIGLALSIFFKLLETSNDIDIGVSVPGSVACNTLLVALRKADMRVEFKKV 247
Query: 542 FGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFD---PDLCTYNSL 712
F KL+ F LD WGYNICIH GCW DL TAL LFKEMKEKS F PDLCTYNSL
Sbjct: 248 FDKLKGMG-FELDTWGYNICIHAFGCWSDLGTALRLFKEMKEKSKGFGSCCPDLCTYNSL 306
Query: 713 IHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNG 892
I +LC GKV+DAL+V+EELK SGHEPDAFTYRI+I+GCSKSYR+NDA KIFSEMQYNG
Sbjct: 307 IRLLCFSGKVKDALVVYEELK-ISGHEPDAFTYRIIIEGCSKSYRMNDATKIFSEMQYNG 365
Query: 893 VRAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGRAEAA 1072
+T VYNSLLDG+ K+RK+TEAC LFEKMV DGVRAS WTYNILIDGL KNGR+ A
Sbjct: 366 FVPDTTVYNSLLDGMFKARKVTEACQLFEKMV-QDGVRASSWTYNILIDGLCKNGRSAAG 424
Query: 1073 YTLFSDLKRKGE-VSGIRWS 1129
Y+LF DLK+KG+ V I +S
Sbjct: 425 YSLFCDLKKKGKFVDAITYS 444
Score = 256 bits (654), Expect = 2e-65
Identities = 130/216 (60%), Positives = 161/216 (74%), Gaps = 6/216 (2%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
++G+WD E+LMKHVRDGNLVP++L W++ ME S+K P+S+ +D+TPMF S ++EI+N
Sbjct: 487 KQGRWDWTEKLMKHVRDGNLVPNVLNWQADMEASLKNPRSRRKDYTPMFLSNGSLSEIIN 546
Query: 1282 LPTSADTKGD------VEDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXXKGV 1443
+ D K VE + ETD+WSSSPYMD LAN+ +G
Sbjct: 547 IIRYPDLKNHGLDDNAVEHGDNISAETDQWSSSPYMDHLANQVKSTDNCSQSFSLA-RGQ 605
Query: 1444 RVMAKDEDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGVDPVSYTYNSIMSSFVKR 1623
RV AK +SFDIDMVNT+LSIFLAKGKLS+ACKLFEIF++MGV+PVSYTYNSIMSSFVK+
Sbjct: 606 RVQAKGVESFDIDMVNTFLSIFLAKGKLSVACKLFEIFSDMGVNPVSYTYNSIMSSFVKK 665
Query: 1624 GYFKEAWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
GYF EAW VL+ MGE V P+DIATYN+IIQGLGKMG
Sbjct: 666 GYFSEAWDVLNQMGEKVCPSDIATYNLIIQGLGKMG 701
Score = 59.7 bits (143), Expect = 4e-06
Identities = 39/134 (29%), Positives = 68/134 (50%)
Frame = +2
Query: 590 YNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVLCLLGKVRDALIVWEE 769
YN + + G S A + +M EK + D+ TYN +I L +G+ A V ++
Sbjct: 655 YNSIMSSFVKKGYFSEAWDVLNQMGEK--VCPSDIATYNLIIQGLGKMGRADLASSVLDK 712
Query: 770 LKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAETVVYNSLLDGLLKSR 949
L G+ D Y LI K+ RI++ K+F +M+ +G+ + V YN+L++ K+
Sbjct: 713 LMKQGGYL-DIVMYNTLINALGKAGRIDEVRKLFEQMKTSGINPDVVTYNTLIEVHTKAG 771
Query: 950 KLTEACNLFEKMVD 991
+L +A + M+D
Sbjct: 772 RLKDAYKFLKMMLD 785
>gb|EXC13626.1| hypothetical protein L484_019583 [Morus notabilis]
Length = 788
Score = 433 bits (1113), Expect = e-118
Identities = 229/376 (60%), Positives = 285/376 (75%), Gaps = 1/376 (0%)
Frame = +2
Query: 5 SIPLSEDLVLQVLRRGSLDASKKLDFFRWCSVRPNYKHSAGTYSQMFKAICFLPHQHHDD 184
SIPLSE ++LQ+LR SL SKKLDFF W S+ + K SA +YSQ+ +A+C H H +
Sbjct: 46 SIPLSEPILLQILRNNSLHISKKLDFFTWFSLNSDLKPSAHSYSQVLRALCREGHLH--E 103
Query: 185 ILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVYSP 364
L+ SMR++GV++DS T K +LD FIRSGK+D ALE+LD +E+ + L+ +Y
Sbjct: 104 ASNLLGSMRQNGVIIDSWTFKTLLDTFIRSGKFDFALEILDTMEELGVT---LNSHMYDS 160
Query: 365 VLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIACNELLVGLKKAGMKDEFKQVF 544
VL+ALVRK+Q+S ALSIF K+L S+ +P +I CNELLV LKK+ M+ EFKQVF
Sbjct: 161 VLIALVRKDQLSFALSIFFKILEDSSH------VPSSIGCNELLVALKKSDMRVEFKQVF 214
Query: 545 GKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVL 724
+RE K F ++ WGYNICIH G WGDL T+LSL++EMK G PDLCTYNSLIHVL
Sbjct: 215 DGIREKKGFGMNVWGYNICIHAFGFWGDLGTSLSLYREMKVSVG---PDLCTYNSLIHVL 271
Query: 725 CLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAE 904
C GKV+DAL+V+EELKGS GH+PD FTYRILIQGC KSYRI++A KIF+EM+YNG A+
Sbjct: 272 CFFGKVKDALVVYEELKGS-GHQPDRFTYRILIQGCCKSYRIDNAEKIFNEMEYNGHCAD 330
Query: 905 TVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGRAEAAYTLF 1084
TVVYNSL+DGLLK+RK++EAC LFEKM DGVRAS WTYN LIDGL+KN RAEA YT+F
Sbjct: 331 TVVYNSLIDGLLKARKVSEACELFEKMT-QDGVRASSWTYNTLIDGLFKNERAEAGYTMF 389
Query: 1085 SDLKRKGE-VSGIRWS 1129
DLK+KG+ V GI +S
Sbjct: 390 CDLKKKGQFVDGITYS 405
Score = 256 bits (653), Expect = 3e-65
Identities = 131/220 (59%), Positives = 162/220 (73%), Gaps = 10/220 (4%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGN-LVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEIL 1278
++G+WD +RLMKH+RDGN L+P++L+WK +E S+K PQSK +D+TPMFPS + +EI+
Sbjct: 448 KQGRWDWTDRLMKHIRDGNNLLPNVLRWKIDLEASLKNPQSKRKDYTPMFPSKDEFSEIM 507
Query: 1279 NLPTSADT---------KGDVEDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXX 1431
+L SA+ DV+D E ++ D+WSSSPYMD L N+
Sbjct: 508 SLIRSANATMKAQLVPDNVDVKDDESVSSDIDQWSSSPYMDQLTNQVLSNGRSSQLFSLS 567
Query: 1432 XKGVRVMAKDEDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGVDPVSYTYNSIMSS 1611
+G RV AK DSFDIDMVNT+LSIFLAKGKLSLACKLFEIFT+MGV+PVSYTYNS+M+S
Sbjct: 568 -RGRRVQAKGGDSFDIDMVNTFLSIFLAKGKLSLACKLFEIFTDMGVNPVSYTYNSMMTS 626
Query: 1612 FVKRGYFKEAWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
FVK+GYF EAW +L MGE V PADIATYNVIIQ LGKMG
Sbjct: 627 FVKKGYFDEAWNILGEMGEKVCPADIATYNVIIQSLGKMG 666
>ref|XP_004308750.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570-like
[Fragaria vesca subsp. vesca]
Length = 789
Score = 412 bits (1060), Expect = e-112
Identities = 219/379 (57%), Positives = 274/379 (72%), Gaps = 5/379 (1%)
Frame = +2
Query: 8 IPLSEDLVLQVLRRGSLDASKKLDFFRWCSVRPNYKHSAGTYSQMFKAIC---FLPHQHH 178
+PL+E L+LQ+LR SL SKKLDFF+WCS+ + S +S + C FL
Sbjct: 44 LPLTEPLLLQILRTQSLHPSKKLDFFKWCSLTHSIPPSPRAFSHVLHTACRAGFLA---- 99
Query: 179 DDILELVASMRRDGVVLDSSTLKLILDGFIRSGKYDSALEVLDYVEKDLINTSCLSPDVY 358
+I EL+ MRRD + +DS T K +LD FIR GK+D A+E+LD +++ +N L+ D+Y
Sbjct: 100 -EIPELLTIMRRDSLAVDSGTFKSLLDAFIREGKFDMAIEILDTMQE--VNAE-LNADMY 155
Query: 359 SPVLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIACNELLVGLKKAGMKDEFKQ 538
+ VLVALVRK Q+ +A+SI ++LL G + +P IACNELLVGL+K M+ EFKQ
Sbjct: 156 NSVLVALVRKGQLRLAMSILVRLLE----GGSCDQVPSCIACNELLVGLRKGDMRVEFKQ 211
Query: 539 VFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKE-KSGLFDPDLCTYNSLI 715
V+ KLR + F +D WGYNICIH GCWGDL T+LSLFKEMK+ S PDL TYNSLI
Sbjct: 212 VYDKLRGNEWFEMDTWGYNICIHAFGCWGDLGTSLSLFKEMKDLNSDSVFPDLSTYNSLI 271
Query: 716 HVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYNGV 895
HVLCL+GKV DA+ VWEELK SGHEPDA TYRILIQGC K YRI +A +IFSEMQ NG
Sbjct: 272 HVLCLVGKVDDAITVWEELK-CSGHEPDAITYRILIQGCCKCYRIEEATRIFSEMQNNGY 330
Query: 896 RAETVVYNSLLDGLLKSRKLTEACNLFEKMVDDDGVRASCWTYNILIDGLYKNGRAEAAY 1075
+TVVYNSL+DGL K+RK+ E C +FE+M+ GVRAS WTYNILIDGL++N RAEAAY
Sbjct: 331 NPDTVVYNSLIDGLFKARKVNEGCQMFERMI-QYGVRASTWTYNILIDGLFRNARAEAAY 389
Query: 1076 TLFSDLKRKGE-VSGIRWS 1129
TLF DLK+KG+ V G+ +S
Sbjct: 390 TLFCDLKKKGQFVDGVTYS 408
Score = 243 bits (619), Expect = 2e-61
Identities = 121/219 (55%), Positives = 155/219 (70%), Gaps = 9/219 (4%)
Frame = +1
Query: 1102 RRGQWDSMERLMKHVRDGNLVPSILKWKSAMEGSMKGPQSKTRDFTPMFPSISDVAEILN 1281
+ +WD ++LMK +RDGNL+PS+LKWK ME ++K PQ +D TP+FPS D +++L+
Sbjct: 451 KHSRWDWTDKLMKRIRDGNLLPSVLKWKVDMEATLKSPQKNKKDHTPLFPSNGDFSDVLS 510
Query: 1282 LPTSADTKGD---------VEDTEQFGNETDEWSSSPYMDMLANKXXXXXXXXXXXXXXX 1434
L +S + D V+D + D+WSSSP+MD LAN+
Sbjct: 511 LISSVASTMDGGFETDDAGVKDDKNSSTPIDQWSSSPHMDQLANQITSTDQSSQQFSLS- 569
Query: 1435 KGVRVMAKDEDSFDIDMVNTYLSIFLAKGKLSLACKLFEIFTNMGVDPVSYTYNSIMSSF 1614
+G RV AK +D+FDIDMVNT+LS+FLAKGKLS+ACKLFEIF++ G +PVSYTYNSI+SSF
Sbjct: 570 RGQRVQAKGDDTFDIDMVNTFLSLFLAKGKLSMACKLFEIFSDTGANPVSYTYNSILSSF 629
Query: 1615 VKRGYFKEAWGVLHAMGETVNPADIATYNVIIQGLGKMG 1731
VK+GYF EAWGVL MGE V P DIATYN+IIQGLGKMG
Sbjct: 630 VKKGYFNEAWGVLSEMGEKVCPTDIATYNMIIQGLGKMG 668
Score = 63.9 bits (154), Expect = 2e-07
Identities = 46/151 (30%), Positives = 73/151 (48%)
Frame = +2
Query: 623 GDLSTALSLFKEMKEKSGLFDPDLCTYNSLIHVLCLLGKVRDALIVWEELKGSSGHEPDA 802
G LS A LF+ + +P TYNS++ G +A V E+ G D
Sbjct: 598 GKLSMACKLFEIFSDTGA--NPVSYTYNSILSSFVKKGYFNEAWGVLSEM-GEKVCPTDI 654
Query: 803 FTYRILIQGCSKSYRINDAMKIFSEMQYNGVRAETVVYNSLLDGLLKSRKLTEACNLFEK 982
TY ++IQG K R + A + ++ G + V+YN+L++ L K+ ++ E LF++
Sbjct: 655 ATYNMIIQGLGKMGRADLASSVLDKLMKQGGYLDVVMYNTLINALGKANRIDEVNKLFKQ 714
Query: 983 MVDDDGVRASCWTYNILIDGLYKNGRAEAAY 1075
M G+ T+N LI+ K GR + AY
Sbjct: 715 M-KSSGINPDVVTFNTLIEVHSKAGRLKDAY 744
Score = 61.6 bits (148), Expect = 1e-06
Identities = 52/181 (28%), Positives = 88/181 (48%)
Frame = +2
Query: 350 DVYSPVLVALVRKNQISIALSIFLKLLSSSTVGNNVVIIPDAIACNELLVGLKKAGMKDE 529
D+ + L + K ++S+A +F + S T N P + N +L K G +E
Sbjct: 585 DMVNTFLSLFLAKGKLSMACKLFE--IFSDTGAN-----PVSYTYNSILSSFVKKGYFNE 637
Query: 530 FKQVFGKLRETKLFPLDRWGYNICIHTLGCWGDLSTALSLFKEMKEKSGLFDPDLCTYNS 709
V ++ E K+ P D YN+ I LG G A S+ ++ ++ G D + YN+
Sbjct: 638 AWGVLSEMGE-KVCPTDIATYNMIIQGLGKMGRADLASSVLDKLMKQGGYLD--VVMYNT 694
Query: 710 LIHVLCLLGKVRDALIVWEELKGSSGHEPDAFTYRILIQGCSKSYRINDAMKIFSEMQYN 889
LI+ L ++ + +++++K SSG PD T+ LI+ SK+ R+ DA K M +
Sbjct: 695 LINALGKANRIDEVNKLFKQMK-SSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDS 753
Query: 890 G 892
G
Sbjct: 754 G 754