BLASTX nr result
ID: Rehmannia26_contig00026983
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00026983
(793 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_006576519.1| replication protein 2a [Amazon lily mild mot... 368 1e-99
gb|AHJ89006.1| putative polymerase [Cassava Ivorian bacilliform ... 327 2e-87
ref|NP_619771.1| putative 2a protein [Pelargonium zonate spot vi... 206 6e-51
gb|AFU72537.1| protein 2a [Pelargonium zonate spot virus] 204 2e-50
emb|CAA41362.1| 2a protein [Brome mosaic virus] 164 4e-38
dbj|BAJ41521.1| 2a protein [Brome mosaic virus] 163 7e-38
gb|ABF83486.1| 2a protein [Brome mosaic virus] 163 7e-38
gb|ADW09018.1| polymerase 2a [Brome mosaic virus] 162 2e-37
ref|NP_041197.1| RNA-dependent RNA polymerase [Brome mosaic viru... 160 5e-37
ref|NP_613275.1| 2a protein [Cowpea chlorotic mottle virus] gi|1... 149 1e-33
gb|AEI54613.1| 2a protein [Cowpea chlorotic mottle virus] 149 1e-33
gb|AEI54609.1| 2a protein [Cowpea chlorotic mottle virus] 149 1e-33
gb|AAN37632.1| 2a protein [Cowpea chlorotic mottle virus] 145 1e-32
gb|AAN37636.1| 2a protein [Cowpea chlorotic mottle virus] 142 1e-31
ref|NP_689393.1| 2a protein [Spring beauty latent virus] gi|2253... 142 2e-31
ref|YP_003208108.1| 2a protein [Melandrium yellow fleck virus] g... 141 2e-31
ref|YP_233102.2| 2a protein [Cassia yellow blotch virus] gi|5131... 135 1e-29
gb|AAA86113.1| 2a protein [Broad bean mottle virus] 134 3e-29
gb|AAA86114.1| 2a protein [Broad bean mottle virus] 134 5e-29
ref|YP_002640501.1| 2a protein [Gayfeather mild mottle virus] gi... 133 8e-29
>ref|YP_006576519.1| replication protein 2a [Amazon lily mild mottle virus]
gi|398650494|dbj|BAM34544.1| replication protein 2a
[Amazon lily mild mottle virus]
Length = 657
Score = 368 bits (945), Expect = 1e-99
Identities = 177/219 (80%), Positives = 199/219 (90%)
Frame = -3
Query: 659 VHSESEVRLMETSYGSHFTLVQEEFIEECPAAAINVATCEPVMQITECDLELPIPILTGR 480
V +E RLME+SYG+HFTLV EEFIEECPAAAINVA+ P+ Q ECDL P+P+L GR
Sbjct: 107 VCTEGNERLMESSYGNHFTLVGEEFIEECPAAAINVASVVPIDQQFECDLTAPLPVLKGR 166
Query: 479 SDRVSLEKLQCTVDAILPTHARFDDTFHQAFVENGDISLDFDRIRLKQYAGDWYKDPDGF 300
SDRV+LEKLQ TVDAILPTHARFDDTFHQAFVEN D+SLDF+RIRLKQYAGDWY+DPD F
Sbjct: 167 SDRVTLEKLQTTVDAILPTHARFDDTFHQAFVENADVSLDFERIRLKQYAGDWYRDPDNF 226
Query: 299 YQPNLLSGGCARRIGSQKEALIAIRKRNADVPELAGSVNIDEVAKWAADNFMKAFVVNVN 120
Y+P L SGGC+RR+GSQKEALIAIRKRNADVPELAGSVNID+VA+WAADNFMK+FVVNV+
Sbjct: 227 YEPVLKSGGCSRRVGSQKEALIAIRKRNADVPELAGSVNIDQVAEWAADNFMKSFVVNVS 286
Query: 119 PLVQVMTRMQAYMSKWADRVDPLFVLGETNLQRYQHMIK 3
PLVQVM++M+AYM KW+DRVDPL VLGETNLQRYQHMIK
Sbjct: 287 PLVQVMSKMKAYMEKWSDRVDPLMVLGETNLQRYQHMIK 325
>gb|AHJ89006.1| putative polymerase [Cassava Ivorian bacilliform virus]
Length = 680
Score = 327 bits (839), Expect = 2e-87
Identities = 156/216 (72%), Positives = 180/216 (83%)
Frame = -3
Query: 650 ESEVRLMETSYGSHFTLVQEEFIEECPAAAINVATCEPVMQITECDLELPIPILTGRSDR 471
E RLMET YG HFTLVQEEF+EE P A++N+A P+ QI CD+E PIP+ GRSDR
Sbjct: 134 EGSDRLMETGYGDHFTLVQEEFVEEIPMASLNIAPVVPLEQIFSCDIEQPIPLTKGRSDR 193
Query: 470 VSLEKLQCTVDAILPTHARFDDTFHQAFVENGDISLDFDRIRLKQYAGDWYKDPDGFYQP 291
V LEKLQ TVD+ILPTH+RFDDTFHQAFVEN DI+LDF+RI+LKQY GDWY+DPD FY+P
Sbjct: 194 VCLEKLQATVDSILPTHSRFDDTFHQAFVENSDINLDFERIKLKQYTGDWYRDPDRFYEP 253
Query: 290 NLLSGGCARRIGSQKEALIAIRKRNADVPELAGSVNIDEVAKWAADNFMKAFVVNVNPLV 111
L SGGCARR+G+QKEALIAIRKRNADVPELAGSV+ID+ AKW AD F K++V ++ PL
Sbjct: 254 ALKSGGCARRVGTQKEALIAIRKRNADVPELAGSVDIDKTAKWVADVFFKSYVSSLKPLE 313
Query: 110 QVMTRMQAYMSKWADRVDPLFVLGETNLQRYQHMIK 3
QVM+RM+AY KW DRVDPL VL TNLQRYQHMIK
Sbjct: 314 QVMSRMKAYCDKWKDRVDPLAVLSGTNLQRYQHMIK 349
>ref|NP_619771.1| putative 2a protein [Pelargonium zonate spot virus]
gi|81968684|sp|Q9DUT2.1|RDRP_PZSVT RecName:
Full=RNA-directed RNA polymerase 2a; Short=protein 2a
gi|10185104|emb|CAC08527.1| putative 2a protein
[Pelargonium zonate spot virus]
Length = 687
Score = 206 bits (525), Expect = 6e-51
Identities = 103/208 (49%), Positives = 145/208 (69%), Gaps = 1/208 (0%)
Frame = -3
Query: 623 SYGSHFTLVQEEFIEECPAAAINVATCEPVMQITECDLELPIPILTGRS-DRVSLEKLQC 447
S+ +FT+V+EEF+EE P ++N PV LE P+ + GR DRV+LE LQ
Sbjct: 150 SFRDYFTIVEEEFVEEDPLISLNDGNVCPVRTHEVTSLEKPVMLDVGRRCDRVNLESLQG 209
Query: 446 TVDAILPTHARFDDTFHQAFVENGDISLDFDRIRLKQYAGDWYKDPDGFYQPNLLSGGCA 267
++ LP+HA FDDT+HQ FVE + +DFD IRL+Q +D D +YQP L +G +
Sbjct: 210 AINMNLPSHAYFDDTWHQYFVEGSKLDVDFDNIRLRQSEVFCDRDLDRYYQPELFAGASS 269
Query: 266 RRIGSQKEALIAIRKRNADVPELAGSVNIDEVAKWAADNFMKAFVVNVNPLVQVMTRMQA 87
RRIG+QKEAL+AIRKRNADVPELA SV+++ +++ A F+ ++V ++ P+V VM +M+A
Sbjct: 270 RRIGTQKEALVAIRKRNADVPELADSVDVERLSESVAKKFLSSYVCDLKPVVGVMEKMRA 329
Query: 86 YMSKWADRVDPLFVLGETNLQRYQHMIK 3
Y KW D++DP+F+L E NLQRY+HMIK
Sbjct: 330 YHQKWGDKIDPMFLLKEHNLQRYEHMIK 357
>gb|AFU72537.1| protein 2a [Pelargonium zonate spot virus]
Length = 687
Score = 204 bits (520), Expect = 2e-50
Identities = 100/208 (48%), Positives = 145/208 (69%), Gaps = 1/208 (0%)
Frame = -3
Query: 623 SYGSHFTLVQEEFIEECPAAAINVATCEPVMQITECDLELPIPILTGRS-DRVSLEKLQC 447
S+ +FT+V+EE +EE P ++N P+ + L+ P+ + GR DRV+LE LQ
Sbjct: 150 SFRDYFTIVEEELVEEDPLISLNDGNVCPIRTLEVTSLKKPVMLDVGRRCDRVNLESLQG 209
Query: 446 TVDAILPTHARFDDTFHQAFVENGDISLDFDRIRLKQYAGDWYKDPDGFYQPNLLSGGCA 267
++ LP+HA FDDT+HQ FVE + +DFD IRL+Q +D D +YQP L +G +
Sbjct: 210 AINMNLPSHAYFDDTWHQYFVEGSKLDVDFDNIRLRQSEVFCDRDLDRYYQPELFAGASS 269
Query: 266 RRIGSQKEALIAIRKRNADVPELAGSVNIDEVAKWAADNFMKAFVVNVNPLVQVMTRMQA 87
RRIG+QKEAL+AIRKRNADVPELA SV+++ +++ A F+ ++V ++ P+V VM +M+A
Sbjct: 270 RRIGTQKEALVAIRKRNADVPELADSVDVERLSELVAKKFLSSYVCDLKPVVGVMEKMRA 329
Query: 86 YMSKWADRVDPLFVLGETNLQRYQHMIK 3
Y KW D++DP+F+L E NLQRY+HMIK
Sbjct: 330 YHQKWGDKIDPMFLLKEHNLQRYEHMIK 357
>emb|CAA41362.1| 2a protein [Brome mosaic virus]
Length = 822
Score = 164 bits (414), Expect = 4e-38
Identities = 105/254 (41%), Positives = 140/254 (55%), Gaps = 26/254 (10%)
Frame = -3
Query: 686 KDLESDFPLVHSES-----EVRLM-----ETSYGSHFTLVQEEFIEECPAAAINVATCEP 537
+D SD L S EVR+ E + G + + EEF I + P
Sbjct: 137 EDHASDLKLASDSSNCEIEEVRVTGDTPKELTLGDRYMGIDEEFQTTNTDYDITLQIMNP 196
Query: 536 VMQI------TECDLELPIPILTGRS--DRVSLEKLQCTVDAILPTHARFDDTFHQAFVE 381
+ T C + P I TG +RVSL + + T +ILPTHA FDD++HQA VE
Sbjct: 197 IEHRVSRVIDTHCHPDNP-DISTGPIYVERVSLARTEATSHSILPTHAYFDDSYHQALVE 255
Query: 380 NGDISLDFDRIRLKQYAGDWYKDPDGFYQPNLLSGGCARRIGSQKEALIAIRKRNADVPE 201
NGD S+DFDRIRLKQ DWYKDPD ++QP + G RR+G+QKE L A++KRNADVPE
Sbjct: 256 NGDYSMDFDRIRLKQSDVDWYKDPDKYFQPKMNIGSAQRRVGTQKEVLTALKKRNADVPE 315
Query: 200 LAGSVNIDEVAKWAADNFMKAFVVNVN------PLVQVMTRMQAYMSKWADRVD--PLFV 45
+ ++N+ E AK A F F +NV+ + VMT+ Y KW +D + V
Sbjct: 316 MGDAINMKETAKAIAKRFRSTF-LNVDGEDCLRASMDVMTKCLEYHKKWGKHMDLQGVNV 374
Query: 44 LGETNLQRYQHMIK 3
ET+L+RYQHM+K
Sbjct: 375 AAETDLRRYQHMLK 388
>dbj|BAJ41521.1| 2a protein [Brome mosaic virus]
Length = 822
Score = 163 bits (412), Expect = 7e-38
Identities = 104/254 (40%), Positives = 140/254 (55%), Gaps = 26/254 (10%)
Frame = -3
Query: 686 KDLESDFPLVHSES-----EVRLM-----ETSYGSHFTLVQEEFIEECPAAAINVATCEP 537
+D SD L S EVR+ E + G + + EEF I + P
Sbjct: 137 EDHASDLKLASDSSNCEIEEVRVTGDTPKELTLGDRYMGIDEEFQTTNTDYDITLQIMNP 196
Query: 536 VMQI------TECDLELPIPILTGR--SDRVSLEKLQCTVDAILPTHARFDDTFHQAFVE 381
+ T C + P I TG +RVSL + + T +ILPTHA FDD++HQA VE
Sbjct: 197 IEHRVSRVIDTHCHPDNP-DISTGPIYMERVSLARTEATSHSILPTHAYFDDSYHQALVE 255
Query: 380 NGDISLDFDRIRLKQYAGDWYKDPDGFYQPNLLSGGCARRIGSQKEALIAIRKRNADVPE 201
NGD S+DFDRIRLKQ DWY+DPD ++QP + G RR+G+QKE L A++KRNADVPE
Sbjct: 256 NGDYSMDFDRIRLKQSDVDWYRDPDKYFQPKMNIGSAQRRVGTQKEVLTALKKRNADVPE 315
Query: 200 LAGSVNIDEVAKWAADNFMKAFVVNVN------PLVQVMTRMQAYMSKWADRVD--PLFV 45
+ ++N+ E AK A F F +NV+ + VMT+ Y KW +D + V
Sbjct: 316 MGDAINMKETAKAIAKRFRSTF-LNVDGEDCLRASMDVMTKCLEYHKKWGKHMDLQGVNV 374
Query: 44 LGETNLQRYQHMIK 3
ET+L+RYQHM+K
Sbjct: 375 AAETDLRRYQHMLK 388
>gb|ABF83486.1| 2a protein [Brome mosaic virus]
Length = 822
Score = 163 bits (412), Expect = 7e-38
Identities = 104/254 (40%), Positives = 140/254 (55%), Gaps = 26/254 (10%)
Frame = -3
Query: 686 KDLESDFPLVHSES-----EVRLM-----ETSYGSHFTLVQEEFIEECPAAAINVATCEP 537
+D SD L S EVR+ E + G + + EEF I + P
Sbjct: 137 EDHASDLKLASDSSNCEIEEVRVTGDTPKELTLGDRYMGIDEEFQTTNTDYDITLQIMNP 196
Query: 536 VMQI------TECDLELPIPILTGR--SDRVSLEKLQCTVDAILPTHARFDDTFHQAFVE 381
+ T C + P I TG +RVSL + + T +ILPTHA FDD++HQA VE
Sbjct: 197 IEHRVSRVIDTHCHPDNP-DISTGPIYMERVSLARTEATSHSILPTHAYFDDSYHQALVE 255
Query: 380 NGDISLDFDRIRLKQYAGDWYKDPDGFYQPNLLSGGCARRIGSQKEALIAIRKRNADVPE 201
NGD S+DFDRIRLKQ DWY+DPD ++QP + G RR+G+QKE L A++KRNADVPE
Sbjct: 256 NGDYSMDFDRIRLKQSDVDWYRDPDKYFQPKMNIGSAQRRVGTQKEVLTALKKRNADVPE 315
Query: 200 LAGSVNIDEVAKWAADNFMKAFVVNVN------PLVQVMTRMQAYMSKWADRVD--PLFV 45
+ ++N+ E AK A F F +NV+ + VMT+ Y KW +D + V
Sbjct: 316 MGDAINMKETAKAIAKRFRSTF-LNVDGEDCLRASMDVMTKCLEYHKKWGKHMDLQGVNV 374
Query: 44 LGETNLQRYQHMIK 3
ET+L+RYQHM+K
Sbjct: 375 AAETDLRRYQHMLK 388
>gb|ADW09018.1| polymerase 2a [Brome mosaic virus]
Length = 822
Score = 162 bits (409), Expect = 2e-37
Identities = 104/254 (40%), Positives = 140/254 (55%), Gaps = 26/254 (10%)
Frame = -3
Query: 686 KDLESDFPLVHSES-----EVRLM-----ETSYGSHFTLVQEEFIEECPAAAINVATCEP 537
+D SD L S EVR+ E + G + + EEF I + P
Sbjct: 137 EDHASDLKLASDSSNCEIEEVRVTGDTPKELTLGDRYMGIDEEFQTTNTDYDITLQIMNP 196
Query: 536 VMQI------TECDLELPIPILTGR--SDRVSLEKLQCTVDAILPTHARFDDTFHQAFVE 381
+ + T C + P I TG +RVSL + + T +ILPTHA FDD++HQA VE
Sbjct: 197 IERRVSRVIDTHCHPDNP-DISTGPIYMERVSLARTEATSHSILPTHAYFDDSYHQALVE 255
Query: 380 NGDISLDFDRIRLKQYAGDWYKDPDGFYQPNLLSGGCARRIGSQKEALIAIRKRNADVPE 201
NGD S+DFDRIRLKQ DWYKDPD ++QP + G RR+G+QKE L A++KRNADVPE
Sbjct: 256 NGDYSMDFDRIRLKQSDVDWYKDPDRYFQPKMNIGSAQRRVGTQKEVLTALKKRNADVPE 315
Query: 200 LAGSVNIDEVAKWAADNFMKAFVVNVN------PLVQVMTRMQAYMSKWADRVD--PLFV 45
+ ++N+ + AK A F F +NV+ + VMT+ Y KW +D + V
Sbjct: 316 MGDAINMKDTAKAIAKRFRSTF-LNVDGEDCLRASMDVMTKCLEYHKKWGKHMDLQGVNV 374
Query: 44 LGETNLQRYQHMIK 3
ET+L RYQHM+K
Sbjct: 375 AAETDLCRYQHMLK 388
>ref|NP_041197.1| RNA-dependent RNA polymerase [Brome mosaic virus]
gi|137271|sp|P03594.1|RDRP_BMV RecName:
Full=RNA-directed RNA polymerase 2a; Short=protein 2a
gi|58731|emb|CAA25834.1| unnamed protein product [Brome
mosaic virus]
Length = 822
Score = 160 bits (405), Expect = 5e-37
Identities = 103/254 (40%), Positives = 139/254 (54%), Gaps = 26/254 (10%)
Frame = -3
Query: 686 KDLESDFPLVHSES-----EVRLM-----ETSYGSHFTLVQEEFIEECPAAAINVATCEP 537
+D SD L S EVR+ E + G + + EEF I + P
Sbjct: 137 EDHASDLKLASDSSNCEIEEVRVTGDTPKELTLGDRYMGIDEEFQTTNTDYDITLQIMNP 196
Query: 536 VMQI------TECDLELPIPILTGR--SDRVSLEKLQCTVDAILPTHARFDDTFHQAFVE 381
+ T C + P I TG +RVSL + + T +ILPTHA FDD++HQA VE
Sbjct: 197 IEHRVSRVIDTHCHPDNP-DISTGPIYMERVSLARTEATSHSILPTHAYFDDSYHQALVE 255
Query: 380 NGDISLDFDRIRLKQYAGDWYKDPDGFYQPNLLSGGCARRIGSQKEALIAIRKRNADVPE 201
NGD S+DFDRIRLKQ DWY+DPD ++QP + G RR+G+QKE L A++KRNADVPE
Sbjct: 256 NGDYSMDFDRIRLKQSDVDWYRDPDKYFQPKMNIGSAQRRVGTQKEVLTALKKRNADVPE 315
Query: 200 LAGSVNIDEVAKWAADNFMKAFVVNVN------PLVQVMTRMQAYMSKWADRVD--PLFV 45
+ ++N+ + AK A F F +NV+ + VMT+ Y KW +D + V
Sbjct: 316 MGDAINMKDTAKAIAKRFRSTF-LNVDGEDCLRASMDVMTKCLEYHKKWGKHMDLQGVNV 374
Query: 44 LGETNLQRYQHMIK 3
ET+L RYQHM+K
Sbjct: 375 AAETDLCRYQHMLK 388
>ref|NP_613275.1| 2a protein [Cowpea chlorotic mottle virus]
gi|137272|sp|P20179.1|RDRP_CCMV RecName:
Full=RNA-directed RNA polymerase 2a; Short=protein 2a
gi|331606|gb|AAA46371.1| 2a protein [Cowpea chlorotic
mottle virus]
Length = 808
Score = 149 bits (376), Expect = 1e-33
Identities = 83/191 (43%), Positives = 115/191 (60%), Gaps = 7/191 (3%)
Frame = -3
Query: 554 VATCEPVMQITECDLELPIPILTGRSDRVSLEKLQCTVDAILPTHARFDDTFHQAFVENG 375
V CE + +E D P + DR+SL+ L+ +LPTHA FDDT++QA E G
Sbjct: 213 VGVCEDTYRHSEAD----DPTMPQYHDRISLKSLEAAGHHMLPTHAYFDDTYYQALEELG 268
Query: 374 DISLDFDRIRLKQYAGDWYKDPDGFYQPNLLSGGCARRIGSQKEALIAIRKRNADVPELA 195
D ++D ++ ++Q DWY+DP+ +Y+P L G RRIG+QK L A++KRNADVPELA
Sbjct: 269 DYNVDISKLSVRQSDVDWYRDPEKYYEPELSIGSFQRRIGTQKTVLTALKKRNADVPELA 328
Query: 194 GSVNIDEVAKWAADNFMKAFVVN-----VNPLVQVMTRMQAYMSKWADRVD--PLFVLGE 36
SV+I VA A+ F +A++ + + + VM+R Y KW D D + VL E
Sbjct: 329 DSVDIKRVACEVAEKFKRAYLNHSGIGLLGQSMDVMSRGLEYHKKWKDHKDLTGVTVLSE 388
Query: 35 TNLQRYQHMIK 3
NLQRYQHMIK
Sbjct: 389 INLQRYQHMIK 399
>gb|AEI54613.1| 2a protein [Cowpea chlorotic mottle virus]
Length = 808
Score = 149 bits (376), Expect = 1e-33
Identities = 83/191 (43%), Positives = 115/191 (60%), Gaps = 7/191 (3%)
Frame = -3
Query: 554 VATCEPVMQITECDLELPIPILTGRSDRVSLEKLQCTVDAILPTHARFDDTFHQAFVENG 375
V CE + +E D P + DR+SL+ L+ +LPTHA FDDT++QA E G
Sbjct: 213 VGVCEDTYRHSEAD----DPTMPQYHDRISLKSLEAAGHHMLPTHAYFDDTYYQALEELG 268
Query: 374 DISLDFDRIRLKQYAGDWYKDPDGFYQPNLLSGGCARRIGSQKEALIAIRKRNADVPELA 195
D ++D ++ ++Q DWY+DP+ +Y+P L G RRIG+QK L A++KRNADVPELA
Sbjct: 269 DYNVDISKLSVRQSDVDWYRDPEKYYEPELSIGSFQRRIGTQKTVLTALKKRNADVPELA 328
Query: 194 GSVNIDEVAKWAADNFMKAFVVN-----VNPLVQVMTRMQAYMSKWADRVD--PLFVLGE 36
SV+I VA A+ F +A++ + + + VM+R Y KW D D + VL E
Sbjct: 329 DSVDIKRVACEVAEKFKRAYLNHSGIGLLGQSMDVMSRGLEYHKKWKDHKDLTGVTVLSE 388
Query: 35 TNLQRYQHMIK 3
NLQRYQHMIK
Sbjct: 389 INLQRYQHMIK 399
>gb|AEI54609.1| 2a protein [Cowpea chlorotic mottle virus]
Length = 808
Score = 149 bits (376), Expect = 1e-33
Identities = 83/191 (43%), Positives = 115/191 (60%), Gaps = 7/191 (3%)
Frame = -3
Query: 554 VATCEPVMQITECDLELPIPILTGRSDRVSLEKLQCTVDAILPTHARFDDTFHQAFVENG 375
V CE + +E D P + DR+SL+ L+ +LPTHA FDDT++QA E G
Sbjct: 213 VGVCEDTYRHSEAD----DPTMPQYHDRISLKSLEAAGHHMLPTHAYFDDTYYQALEELG 268
Query: 374 DISLDFDRIRLKQYAGDWYKDPDGFYQPNLLSGGCARRIGSQKEALIAIRKRNADVPELA 195
D ++D ++ ++Q DWY+DP+ +Y+P L G RRIG+QK L A++KRNADVPELA
Sbjct: 269 DYNVDISKLSVRQSDVDWYRDPEKYYEPELSIGSFQRRIGTQKTVLTALKKRNADVPELA 328
Query: 194 GSVNIDEVAKWAADNFMKAFVVN-----VNPLVQVMTRMQAYMSKWADRVD--PLFVLGE 36
SV+I VA A+ F +A++ + + + VM+R Y KW D D + VL E
Sbjct: 329 DSVDIKRVACEVAEKFKRAYLNHSGIGLLGQSMDVMSRGLEYHKKWKDHKDLTGVTVLSE 388
Query: 35 TNLQRYQHMIK 3
NLQRYQHMIK
Sbjct: 389 INLQRYQHMIK 399
>gb|AAN37632.1| 2a protein [Cowpea chlorotic mottle virus]
Length = 808
Score = 145 bits (367), Expect = 1e-32
Identities = 82/191 (42%), Positives = 114/191 (59%), Gaps = 7/191 (3%)
Frame = -3
Query: 554 VATCEPVMQITECDLELPIPILTGRSDRVSLEKLQCTVDAILPTHARFDDTFHQAFVENG 375
V CE + +E D P + DR+SL+ L+ +LPTHA FDDT++QA E G
Sbjct: 213 VGVCEDTYRHSEAD----DPTMPQYHDRISLKSLEAAGHHMLPTHAYFDDTYYQALEELG 268
Query: 374 DISLDFDRIRLKQYAGDWYKDPDGFYQPNLLSGGCARRIGSQKEALIAIRKRNADVPELA 195
D ++D ++ ++Q DWY+DP+ +Y+P L G RRIG+QK L A++KRNADVPELA
Sbjct: 269 DYNVDISKLSVRQSDVDWYRDPEKYYEPELSIGSFQRRIGTQKTVLTALKKRNADVPELA 328
Query: 194 GSVNIDEVAKWAADNFMKAFVVN-----VNPLVQVMTRMQAYMSKWADRVD--PLFVLGE 36
SV+I VA A+ F +A++ + + + VM+R Y KW D D + VL E
Sbjct: 329 DSVDIKRVACEVAEKFKRAYLNHSGIGLLGQSMDVMSRGLEYHKKWKDHKDLTGVTVLSE 388
Query: 35 TNLQRYQHMIK 3
NLQRYQ MIK
Sbjct: 389 INLQRYQDMIK 399
>gb|AAN37636.1| 2a protein [Cowpea chlorotic mottle virus]
Length = 808
Score = 142 bits (358), Expect = 1e-31
Identities = 81/191 (42%), Positives = 112/191 (58%), Gaps = 7/191 (3%)
Frame = -3
Query: 554 VATCEPVMQITECDLELPIPILTGRSDRVSLEKLQCTVDAILPTHARFDDTFHQAFVENG 375
V CE + +E D P + DR+SL+ L+ +LPTHA FDDT++QA E G
Sbjct: 213 VGVCEDTYRHSEAD----DPTMPQYHDRISLKSLEAAGHHMLPTHAYFDDTYYQALEELG 268
Query: 374 DISLDFDRIRLKQYAGDWYKDPDGFYQPNLLSGGCARRIGSQKEALIAIRKRNADVPELA 195
D ++D ++ ++Q DWY+DP+ +Y+P L G RRIG+QK L A++KRNADVPELA
Sbjct: 269 DYNVDISKLSVRQSDVDWYRDPEKYYEPELSIGSFQRRIGTQKTVLTALKKRNADVPELA 328
Query: 194 GSVNIDEVAKWAADNFMKAFVVN-----VNPLVQVMTRMQAYMSKWADRVD--PLFVLGE 36
SV+I VA A+ F +A++ + + + VM R Y KW D D + VL E
Sbjct: 329 DSVDIKRVACEVAEKFKRAYLNHSGIGLLGQSMDVMYRGLEYHKKWKDHKDLTGVTVLSE 388
Query: 35 TNLQRYQHMIK 3
N QRYQ MIK
Sbjct: 389 INSQRYQDMIK 399
>ref|NP_689393.1| 2a protein [Spring beauty latent virus] gi|22531642|dbj|BAC10646.1|
2a protein [Spring beauty latent virus]
Length = 831
Score = 142 bits (357), Expect = 2e-31
Identities = 77/165 (46%), Positives = 104/165 (63%), Gaps = 7/165 (4%)
Frame = -3
Query: 476 DRVSLEKLQCTVDAILPTHARFDDTFHQAFVENGDISLDFDRIRLKQYAGDWYKDPDGFY 297
+RVSL +L+ ILPTHA FDD+F+QA EN D+SLDF+RI LKQ DWY+DPD ++
Sbjct: 246 ERVSLPRLEAAGHTILPTHAYFDDSFYQAIEENSDMSLDFNRINLKQSDVDWYRDPDKYF 305
Query: 296 QPNLLSGGCARRIGSQKEALIAIRKRNADVPELAGSVNIDEVAKWAADNFMKAFVVN--- 126
+P+L G RR+G+QK L A++KRNADVPE+ V+I VA A F+K F+
Sbjct: 306 EPHLNIGSFQRRVGTQKTVLTALKKRNADVPEMGDVVDIKSVAADVARTFLKTFLNKDGK 365
Query: 125 --VNPLVQVMTRMQAYMSKWADRVD--PLFVLGETNLQRYQHMIK 3
+ + V+ + Y +KW D + + E NLQRYQHMIK
Sbjct: 366 DCLLASMDVLAKGLDYHNKWKTHRDLQGVTLCTEQNLQRYQHMIK 410
>ref|YP_003208108.1| 2a protein [Melandrium yellow fleck virus]
gi|259651324|dbj|BAI40162.1| 2a protein [Melandrium
yellow fleck virus]
Length = 828
Score = 141 bits (356), Expect = 2e-31
Identities = 72/166 (43%), Positives = 107/166 (64%), Gaps = 8/166 (4%)
Frame = -3
Query: 476 DRVSLEKLQCTVDAILPTHARFDDTFHQAFVENGDISLDFDRIRLKQYAGDWYKDPDGFY 297
+RVSL ++ +LPTHA FDDT++QA EN D S DF+++++KQ DWY+DPD +Y
Sbjct: 247 ERVSLNRVDAVGHHMLPTHAYFDDTYYQALEENADYSSDFNKLKIKQSDVDWYRDPDKYY 306
Query: 296 QPNLLSGGCARRIGSQKEALIAIRKRNADVPELAGSVNIDEVAKWAADNFMKAFVVNVNP 117
+PNL G +RIG+QK L A++KRNADVPE++ ++++ VA+ AD F+ ++ +NV+
Sbjct: 307 EPNLTIGSFQKRIGTQKTVLTALKKRNADVPEMSDAIDVKRVAREVADKFISSY-LNVDG 365
Query: 116 L------VQVMTRMQAYMSKWAD--RVDPLFVLGETNLQRYQHMIK 3
+ VM + Y KW D + + + NLQRYQHMIK
Sbjct: 366 KDCFINGLNVMAKGLDYYKKWKDHRELSGVTIATGENLQRYQHMIK 411
>ref|YP_233102.2| 2a protein [Cassia yellow blotch virus]
gi|513125397|dbj|BAD98317.2| 2a protein [Cassia yellow
blotch virus]
Length = 799
Score = 135 bits (341), Expect = 1e-29
Identities = 87/235 (37%), Positives = 127/235 (54%), Gaps = 20/235 (8%)
Frame = -3
Query: 647 SEVRLMETSYGSHFTLVQEEFIE-ECPAAAINVATCEPVMQITECDLELPIP-------- 495
S+ ++E + F + EF + E + + P+MQ+ E LE +P
Sbjct: 163 SKSDVVEFTLADRFQVTSGEFFDLENSNYQLTLDLQNPMMQMVE-GLEDTLPETEPDEQL 221
Query: 494 -ILTGRSDRVSLEKLQCTVDAILPTHARFDDTFHQAFVENGDISLDFDRIRLKQYAGDWY 318
+ ++RVS E L+ +LPTHA FDD+ QA E D +LDF+RI++ Q DWY
Sbjct: 222 TLAPRFTERVSCEALEGAGHRMLPTHAYFDDSHMQALEEIADYNLDFERIKISQSGVDWY 281
Query: 317 KDPDGFYQPNLLSGGCARRIGSQKEALIAIRKRNADVPELAGSVNIDEVAKWAADNFMKA 138
KDPD +Y+P + G +RR+G+QK L A++KRNADVPELA +V+I VA + F +
Sbjct: 282 KDPDKYYEPKMQIGSFSRRVGTQKTVLTALKKRNADVPELADNVDIQSVAAEVSQRFFET 341
Query: 137 FVVNVNP--------LVQVMTRMQAYMSKWADRVD--PLFVLGETNLQRYQHMIK 3
F +NP + VM + Y KW+ D + V+ E NLQ Y+HMIK
Sbjct: 342 F---LNPGCENLFRGDLNVMAKAFEYEKKWSKHKDLVDVNVMSERNLQSYKHMIK 393
>gb|AAA86113.1| 2a protein [Broad bean mottle virus]
Length = 827
Score = 134 bits (338), Expect = 3e-29
Identities = 84/226 (37%), Positives = 125/226 (55%), Gaps = 16/226 (7%)
Frame = -3
Query: 632 METSYGSHFTLVQEEF--IEECPAAAINVATCEPVMQITEC-------DLELPIPILTGR 480
+ET+ G + + EEF IE+ ++N+ PV Q E P +
Sbjct: 185 VETTMGHRYLALSEEFASIEDDYQVSLNLT--HPVEQRVSILHDTWNGFTEETHPKMPIY 242
Query: 479 SDRVSLEKLQCTVDAILPTHARFDDTFHQAFVENGDISLDFDRIRLKQYAGDWYKDPDGF 300
D+ S+E L+ L THA FDD+++Q F E+ D S DF R+++KQ DWYKDPD F
Sbjct: 243 RDKASIESLEAAGHNALKTHAYFDDSYYQGFEESADFSSDFQRLKIKQSHVDWYKDPDKF 302
Query: 299 YQPNLLSGGCARRIGSQKEALIAIRKRNADVPELAGSVNIDEVAKWAADNFMKAFVVN-- 126
++P L G +RR+G+QK L A++KRNADVPEL+ V+I +VA A+ F ++++
Sbjct: 303 FEPVLNFGASSRRVGTQKTVLTALKKRNADVPELSDVVDIHKVATEVANMFRQSYLNRDG 362
Query: 125 ---VNPLVQVMTRMQAYMSKWAD--RVDPLFVLGETNLQRYQHMIK 3
+ +M + Y +W + + +L ETNLQRYQHMIK
Sbjct: 363 ADCLFESFNIMAKGLDYHKRWKSHKELQGVTLLCETNLQRYQHMIK 408
>gb|AAA86114.1| 2a protein [Broad bean mottle virus]
Length = 827
Score = 134 bits (336), Expect = 5e-29
Identities = 84/226 (37%), Positives = 124/226 (54%), Gaps = 16/226 (7%)
Frame = -3
Query: 632 METSYGSHFTLVQEEF--IEECPAAAINVATCEPVMQITEC-------DLELPIPILTGR 480
+ET+ G + + EEF IE+ ++N+ PV Q E P +
Sbjct: 185 VETTMGHRYLALSEEFASIEDDYQVSLNLT--HPVEQRVSILHDTWNGFTEETHPKMPIY 242
Query: 479 SDRVSLEKLQCTVDAILPTHARFDDTFHQAFVENGDISLDFDRIRLKQYAGDWYKDPDGF 300
D+ S+E L+ L THA FDD+++Q F EN D S DF R+++KQ DWYKDPD F
Sbjct: 243 RDKASIESLEAAGHNALKTHAYFDDSYYQGFEENADFSSDFQRLKIKQSHVDWYKDPDKF 302
Query: 299 YQPNLLSGGCARRIGSQKEALIAIRKRNADVPELAGSVNIDEVAKWAADNFMKAFVVN-- 126
++P L G ++R+G+QK L A++KRNADVPEL+ V+I +VA A+ F + ++
Sbjct: 303 FEPVLNFGASSKRVGTQKTVLTALKKRNADVPELSDVVDIHKVAIEVANVFRQTYLNRDG 362
Query: 125 ---VNPLVQVMTRMQAYMSKWAD--RVDPLFVLGETNLQRYQHMIK 3
+ +M + Y +W + + +L ETNLQRYQHMIK
Sbjct: 363 ADCLFESFNIMAKGLDYHKRWKSHKELQGVTLLCETNLQRYQHMIK 408
>ref|YP_002640501.1| 2a protein [Gayfeather mild mottle virus]
gi|224492620|emb|CAT02557.1| 2a protein [Gayfeather mild
mottle virus]
Length = 777
Score = 133 bits (334), Expect = 8e-29
Identities = 76/172 (44%), Positives = 104/172 (60%), Gaps = 7/172 (4%)
Frame = -3
Query: 497 PILTGRSDRVSLEKLQCTVDAILPTHARFDDTFHQAFVENGDISLDFDRIRLKQYAGDWY 318
P L +DRV ++ +Q D++LPTH +DDT+HQ FVE+ D S+D DRIRLKQ
Sbjct: 271 PSLARPTDRVDVDVVQAVCDSMLPTHVNYDDTYHQVFVEDSDYSVDIDRIRLKQSDLLPK 330
Query: 317 KDPDGFYQPNLLSGGCARRIGSQKEALIAIRKRNADVPELAGSVNIDEVAKWAADNFMKA 138
DG P L +G +R+G+QKE AI+KRNADVPEL SVN+ +++ A+ F+ +
Sbjct: 331 VSDDGHMHPVLNTGSGHKRVGTQKEVHTAIKKRNADVPELGDSVNLTRLSEAVAERFISS 390
Query: 137 FVVNVNPLV-----QVMTRMQAYMSKWADRV--DPLFVLGETNLQRYQHMIK 3
+ +NVN LV V+ AYM KW + D L L NLQ Y+HM+K
Sbjct: 391 Y-MNVNALVSSNFINVVGNFHAYMQKWHSSLSYDDLPDLNAENLQFYEHMVK 441