BLASTX nr result
ID: Rehmannia26_contig00026977
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00026977
(339 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana] 70 3e-10
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] 67 2e-09
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera] 66 4e-09
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 65 9e-09
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211... 65 1e-08
ref|XP_004149403.1| PREDICTED: uncharacterized protein LOC101215... 62 6e-08
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 62 6e-08
ref|XP_004499523.1| PREDICTED: uncharacterized protein LOC101509... 62 8e-08
gb|ACB45089.1| putative polyprotein [Solanum habrochaites] 61 1e-07
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera] 61 1e-07
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 61 2e-07
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 61 2e-07
dbj|BAD43406.1| hypothetical protein [Arabidopsis thaliana] 60 4e-07
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera] 60 4e-07
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 59 5e-07
emb|CAA19696.1| putative LTR retrotransposon (fragment) [Arabido... 59 5e-07
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 59 5e-07
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera] 59 7e-07
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera] 59 7e-07
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera] 59 7e-07
>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
Length = 1436
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Frame = -1
Query: 309 TKE-MIGKGDVVGGLYVLDSIVAFSHQLQTPINNVSSSVFTTTQLWHHRFGHPSWQCLSP 133
TKE M+GKG VG LY+L+ + P +V SSV +++WH R GHPS+ +
Sbjct: 513 TKELMLGKGSQVGNLYILNLDKSLVDVSSFPGKSVCSSVKNESEMWHKRLGHPSFAKIDT 572
Query: 132 IKEKLAISS---NHDQTVCSIC--PKQKRLMFHSCNKLADVLFDLIHCD 1
+ + L + N D + C +C KQK L F S N + + F+L+H D
Sbjct: 573 LSDVLMLPKQKINKDSSHCHVCHLSKQKHLPFKSVNHIREKAFELVHID 621
>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
Length = 1288
Score = 67.0 bits (162), Expect = 2e-09
Identities = 44/108 (40%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Frame = -1
Query: 303 EMIGKGDVVGGLYVLD--SIVA---FSHQLQTPINNVSSSVFTTTQLWHHRFGHPSWQCL 139
+MIGKG G LY LD S VA F + P +N+ S LWH R GHPS+ L
Sbjct: 376 KMIGKGSRKGQLYQLDFDSFVADKAFVAASRIPTSNILS-------LWHSRLGHPSFSRL 428
Query: 138 SPIKEKLAISSNHDQTVCSICP--KQKRLMFHSCNKLADVLFDLIHCD 1
++ L S+ D T C++CP KQ+ L + S NK FDL+H D
Sbjct: 429 KGLQSVLDFDSSFDLTPCNVCPLAKQRCLPYISLNKRCSSTFDLLHLD 476
>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
Length = 1243
Score = 66.2 bits (160), Expect = 4e-09
Identities = 44/108 (40%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Frame = -1
Query: 303 EMIGKGDVVGGLYVLD--SIVA---FSHQLQTPINNVSSSVFTTTQLWHHRFGHPSWQCL 139
+MIGKG G LY LD S VA F + P +N+ S LWH R GHPS+ L
Sbjct: 375 KMIGKGSRKGQLYQLDFDSFVADKAFVAASRIPTSNILS-------LWHSRLGHPSFSRL 427
Query: 138 SPIKEKLAISSNHDQTVCSICP--KQKRLMFHSCNKLADVLFDLIHCD 1
++ L S+ D T C +CP KQ+ L + S NK FDL+H D
Sbjct: 428 KGLQSVLDFDSSFDLTPCXVCPLAKQRCLPYISLNKRCSSTFDLLHLD 475
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 65.1 bits (157), Expect = 9e-09
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Frame = -1
Query: 321 EDLHTKEMIGKGDVVGGLYVLD--SIVAFSHQLQTPINNVS-SSVFTTTQLWHHRFGHPS 151
+D ++ IG+G+ +GGLYVLD S+ S + + + + + LWH R GHPS
Sbjct: 535 QDPIKEQKIGRGNQIGGLYVLDTSSVECTSVDINSSVTEKQYCNAVVDSALWHSRLGHPS 594
Query: 150 WQCLSPIKEKLAISSNHDQTV--CSICPK--QKRLMFHSCNKLADVLFDLIHCD 1
++ + + L + + + + CSIC K QK L F S N +++ FDLIH D
Sbjct: 595 YEKNDVLHDVLGLPKRNKEDLVHCSICQKAKQKHLSFPSKNNMSENKFDLIHID 648
>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
Length = 2085
Score = 64.7 bits (156), Expect = 1e-08
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Frame = -1
Query: 321 EDLHTKEMIGKGDVVGGLYVLDSIVAFSHQLQTPINNVSSSVFTTTQLWHHRFGHPSWQC 142
+D + IGK ++ GLY+L ++ I + + + +WH R GHPS
Sbjct: 1753 QDKWLLKTIGKAELTNGLYLL----RMKNEKVNCIQHTALMCKVSASMWHKRMGHPSISR 1808
Query: 141 LSPIKEKLAISSNHD-QTVCSICP--KQKRLMFHSCNKLADVLFDLIHCD 1
+ + + + IS + + VC ICP KQ+RL F N +A+ +FDLIHCD
Sbjct: 1809 IKELAKMIEISDFPNCKEVCHICPLAKQRRLSFPILNNIAENIFDLIHCD 1858
>ref|XP_004149403.1| PREDICTED: uncharacterized protein LOC101215551 [Cucumis sativus]
Length = 528
Score = 62.4 bits (150), Expect = 6e-08
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Frame = -1
Query: 321 EDLHTKEMIGKGDVVGGLYVLDSIVAFSHQLQTPINNVSSSVFTTTQLWHHRFGHPSWQC 142
+D + IG +++ GLYV AF+ LQ+ I V+S T LWH R GHPS
Sbjct: 293 QDKFALKKIGSAELLYGLYVFKLRNAFN--LQSLICAVNSD---NTFLWHQRLGHPSVDV 347
Query: 141 LSPIKEKLAISS--NHDQTVCSICPKQKRLMFHSCNKLADVLFDLIHCD 1
L ++ L + S +H T CS+ KQ+RL F S N ++ FDLIH D
Sbjct: 348 LKSLQSMLQLKSFTSHTCTTCSLA-KQRRLSFSSNNHVSPNSFDLIHVD 395
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 62.4 bits (150), Expect = 6e-08
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Frame = -1
Query: 321 EDLHTKEMIGKGDVVGGLYVLDSIVAFSHQLQTPINNVSSSVFTTTQLWHHRFGHPSWQC 142
+DL +G+G +G LYVLD+ Q+P +V++ V +WH R GHPS+
Sbjct: 531 QDLTKGLTLGEGKRIGNLYVLDT--------QSPAISVNAVV--DVSVWHKRLGHPSFSR 580
Query: 141 LSPIKEKLAIS--SNHDQTVCSIC--PKQKRLMFHSCNKLADVLFDLIHCD 1
L + E L + N C +C KQK+L F S N + + F+L+H D
Sbjct: 581 LDSLSEVLGTTRHKNKKSAYCHVCHLAKQKKLSFPSANNICNSTFELLHID 631
>ref|XP_004499523.1| PREDICTED: uncharacterized protein LOC101509950 [Cicer arietinum]
Length = 370
Score = 62.0 bits (149), Expect = 8e-08
Identities = 42/114 (36%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Frame = -1
Query: 309 TKEMIGKGDVVGGLYVLDSIVAFSHQLQTPINNV---------SSSVFTTTQLWHHRFGH 157
T +MIG + GLY LQ PIN+V S S T LWH R GH
Sbjct: 196 TSKMIGHAKLFNGLY----------HLQQPINDVKYCVLYSLNSRSSHVTFDLWHLRLGH 245
Query: 156 PSWQCLSPIKEKLAISSNHDQTVCSIC--PKQKRLMFHSCNKLADVLFDLIHCD 1
PS L+ I + S + +C C KQ RL F++ N ++D FDLIH D
Sbjct: 246 PSNNVLTHICKHFPYVSFNSYKICDSCYLAKQSRLPFNASNTISDNAFDLIHMD 299
>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
Length = 849
Score = 61.2 bits (147), Expect = 1e-07
Identities = 45/113 (39%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Frame = -1
Query: 321 EDLHTKEMIGKGDVVGGLYVLDSIVAFSHQLQTPINNVSSSVFTTT----QLWHHRFGHP 154
+DLHT ++ G G + GLY IV+ T +VS SV +T LWH R GH
Sbjct: 220 QDLHTVKVKGTGSMENGLYYWSHIVS-----PTVAYSVSPSVALSTLDDVDLWHRRLGHI 274
Query: 153 SWQCLSPIKEKLAISSNHDQTVCSICP--KQKRLMFHSCNKLADVLFDLIHCD 1
+ L ++ ISS+ T C ICP KQ RL F AD +FDLIH D
Sbjct: 275 PHKVLQQMQIP-HISSSSKLTSCPICPLAKQTRLPFPQSPTRADNVFDLIHAD 326
>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
Length = 1322
Score = 61.2 bits (147), Expect = 1e-07
Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Frame = -1
Query: 321 EDLHTKEMIGKGDVVGGLYVLDSIVAFSHQLQTP------INNVSSSVFTTTQLWHHRFG 160
+DL T+ IG G+ GLY L ++ + + QTP + SS V ++T LWHHR G
Sbjct: 417 QDLTTRTTIGLGEQRDGLYYLVALASEKPKNQTPSAAATSCRSPSSQVTSSTALWHHRLG 476
Query: 159 HPSWQCLSPIKEKLAISSNHDQTVCSIC--PKQKRLMFHSCNKLADVLFDLIHCD 1
H S L + + L C +C KQ+RL F + + F+LIHCD
Sbjct: 477 HLSSSRLDFMAKHLLNFPFQSNNACDVCALAKQRRLPFSVSSISSIRPFELIHCD 531
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 60.8 bits (146), Expect = 2e-07
Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = -1
Query: 321 EDLHTKEMIGKGDVVGGLYVLDSIVAFSHQLQTPINNVSSSVFTTTQLWHHRFGHPS--- 151
+D T++ IG G GLY L Q Q P ++ ++ + LWH R GHPS
Sbjct: 500 QDATTRKTIGLGKQHNGLYYLA-------QDQNPA--LAYAIHKHSDLWHQRLGHPSSGP 550
Query: 150 WQCLSPIKEKLAISSNHDQTVCSICP--KQKRLMFHSCNKLADVLFDLIHCD 1
Q L+ + K+ S H VC ICP KQ RL F S + FDLIHCD
Sbjct: 551 LQVLAKVNPKIYFDSKH---VCDICPLAKQTRLSFPSSFISSHAPFDLIHCD 599
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 60.8 bits (146), Expect = 2e-07
Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Frame = -1
Query: 309 TKE-MIGKGDVVGGLYVLD------SIVAFSHQLQTPINNVSSSVFTTTQLWHHRFGHPS 151
TKE MIG+G VG LYVLD ++ P +V SSV + WH R GHP+
Sbjct: 502 TKELMIGRGSQVGNLYVLDFNENNHTVSLKGTTSMCPEFSVCSSVVVDSVTWHKRLGHPA 561
Query: 150 WQCLSPIKEKL-----AISSNHDQT--VCSIC--PKQKRLMFHSCNKLADVLFDLIHCD 1
+ + + + L I+ H VC +C KQK L F S + FDL+H D
Sbjct: 562 YSKIDLLSDVLNLKVKKINKEHSPVCHVCHVCHLSKQKHLSFQSRQNMCSAAFDLVHID 620
>dbj|BAD43406.1| hypothetical protein [Arabidopsis thaliana]
Length = 161
Score = 59.7 bits (143), Expect = 4e-07
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Frame = -1
Query: 309 TKEM-IGKGDVVGGLYVLDSIVAFSHQLQTPINNVSSSVFTTTQLWHHRFGHPSWQCLSP 133
T+E+ IGKG +G LYVLD+ +TP ++S + +W+ R GHPS+ L
Sbjct: 50 TRELTIGKGRRIGNLYVLDT--------KTP--SISLNAVVDVGMWNRRLGHPSYSRLDV 99
Query: 132 IKEKLAIS--SNHDQTVCSIC--PKQKRLMFHSCNKLADVLFDLIHCD 1
+ E L S N D + C C K ++L F S N + + F+L+H D
Sbjct: 100 LSEDLGTSKHKNKDNSYCHDCHLAKHRKLYFPSGNNICNSAFELLHID 147
>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
Length = 1535
Score = 59.7 bits (143), Expect = 4e-07
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Frame = -1
Query: 321 EDLHTKEMIGKGDVVGGLYVLDSIV-------AFSHQLQTPINNVSSSVFTTTQLWHHRF 163
+DL T+ MIG G GLY L ++ ++S + P N+++S +T LWH R
Sbjct: 496 QDLATRRMIGLGKQRDGLYYLAALTTNKTETNSYSSPNRPPTCNLTTS---STDLWHSRL 552
Query: 162 GHPSWQCLSPIKE---KLAISSNHDQTVCSICPKQKRLMFHSCNKLADVLFDLIHCD 1
GH S LS I + +I N+D +C + KQ RL F + ++ FDLIHCD
Sbjct: 553 GHVSHSRLSFIAKNFLNFSIQFNNDCPIC-LLAKQHRLPFGTSEISSEKPFDLIHCD 608
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 59.3 bits (142), Expect = 5e-07
Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Frame = -1
Query: 321 EDLHTKEMIGKGDVVGGLYVLDSIVAFSHQLQTPINNVSSSVFTTTQLWHHRFGHPSWQC 142
+D + M+G G V LY++D + + SH V+S T+ LWH R GHPS Q
Sbjct: 362 QDATRELMVGMGKQVANLYIVD-LDSLSHPGTDSSITVAS--VTSHDLWHKRLGHPSVQK 418
Query: 141 LSPIKEKLAI--SSNHDQTVCSIC--PKQKRLMFHSCNKLADVLFDLIHCD 1
L P+ L+ N+ C +C KQK L F S N + FDLIH D
Sbjct: 419 LQPMSSLLSFPKQKNNTDFHCRVCHISKQKHLPFVSHNNKSSRPFDLIHID 469
>emb|CAA19696.1| putative LTR retrotransposon (fragment) [Arabidopsis thaliana]
gi|7268775|emb|CAB78981.1| putative LTR retrotransposon
(fragment) [Arabidopsis thaliana]
Length = 281
Score = 59.3 bits (142), Expect = 5e-07
Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
Frame = -1
Query: 309 TKE-MIGKGDVVGGLYVLD-----SIVAFSHQLQT-PINNVSSSVFTTTQLWHHRFGHPS 151
TKE MIG+G VG LYVLD IV+ P +V SSV + WH R GHP+
Sbjct: 95 TKELMIGRGSEVGNLYVLDFNENNHIVSLKGTASMCPEFSVCSSVVVDSVTWHKRLGHPA 154
Query: 150 WQCLSPIKEKLAIS----SNHDQTVCSIC--PKQKRLMFHSCNKLADVLFDLIHCD 1
+ + + + L + + VC +C KQK L F + FDL+H D
Sbjct: 155 YSKIDLLSDVLNLKDKKINKEHSPVCHVCHLSKQKHLSFQYRQNMCSAAFDLVHID 210
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Frame = -1
Query: 321 EDLHTKEMIGKGDVVGGLYVLDSIVAFSHQLQTPINNVSSSVFTTTQLWHHRFGHPSWQC 142
+D +K +IG G+ GG+Y L + TP +++V + LWH R GHPS+
Sbjct: 490 QDRSSKTLIGSGEERGGVYYLTDV--------TPAKIHTANVDSDQALWHQRLGHPSFSV 541
Query: 141 LSPIKEKLAISSNHDQTVCSIC--PKQKRLMFHSCNKLADVLFDLIHCD 1
LS + SS C +C KQ R +F + F LIHCD
Sbjct: 542 LSSLPLFSKTSSTVTSHSCDVCFRAKQTREVFPESINKTEECFSLIHCD 590
>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
Length = 1109
Score = 58.9 bits (141), Expect = 7e-07
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Frame = -1
Query: 321 EDLHTKEMIGKGDVVGGLYVLDSIVAFSHQLQTPINNVSSSVFTTTQLWHHRFGHPSWQC 142
+D ++ +IG G+ GLY L + PI ++ + +LWH R GHPS +
Sbjct: 284 QDRISRMLIGVGEQCEGLYFLKGVA--------PIRAYKTTSIASYELWHRRMGHPSSRV 335
Query: 141 LSPIKEKLAISSN--HDQTVCSIC--PKQKRLMFHSCNKLADVLFDLIHCD 1
+ I E ++ N C IC +Q R MF S + A FDLIHCD
Sbjct: 336 VDLIXEVDSVGRNDGXKNKFCDICFRAQQTREMFFSSDNKAKECFDLIHCD 386
>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
Length = 1059
Score = 58.9 bits (141), Expect = 7e-07
Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Frame = -1
Query: 321 EDLHTKEMIGKGDVVGGLYVLDSIVAFSHQLQTP------INNVSSSVFTTTQLWHHRFG 160
+DL T+ IG G+ GLY L ++ + + QTP + SS V ++T LWH R G
Sbjct: 463 QDLTTRTTIGLGEQRDGLYYLVALASEKPKTQTPSXXATSCRSPSSQVTSSTALWHXRLG 522
Query: 159 HPSWQCLSPIKEKLAISSNHDQTVCSIC--PKQKRLMFHSCNKLADVL-FDLIHCD 1
H S L + + L C +C KQ+RL F S + ++ V F+LIHCD
Sbjct: 523 HLSSSRLDFMAKHLLNFPFQSNNACDVCXLAKQRRLPF-SVSSISSVRPFELIHCD 577
>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
Length = 1149
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Frame = -1
Query: 321 EDLHTKEMIGKGDVVGGLYVLDSIVAFSHQLQTPINNVSSSVFTTTQLWHHRFGHPSWQC 142
+D T+++IG G+ GLY L+ + ++ + T+ +LWH R G+PS++
Sbjct: 397 QDRSTRKVIGAGEQREGLYFLNGAAS--------VHAFKMNGVTSFELWHRRMGYPSFKV 448
Query: 141 LSPIKEKLAISSNHDQTVCSIC--PKQKRLMFHSCNKLADVLFDLIH 7
L I E + + N ++ VC +C KQ R MF S A FDLIH
Sbjct: 449 LGLIPEVVCNNKNENK-VCDVCFXAKQTRKMFSSSENKAKKCFDLIH 494