BLASTX nr result
ID: Rehmannia26_contig00026971
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00026971
(964 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006358794.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 608 e-172
ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 608 e-172
ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 605 e-170
ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [... 593 e-167
ref|XP_002321105.1| DNA topoisomerase family protein [Populus tr... 590 e-166
gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao] 590 e-166
ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 590 e-166
ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric... 585 e-165
gb|EMJ26496.1| hypothetical protein PRUPE_ppa001274mg [Prunus pe... 580 e-163
ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 575 e-162
ref|XP_006492982.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 575 e-162
gb|EXB54788.1| DNA topoisomerase 3-beta-1 [Morus notabilis] 574 e-161
ref|XP_006421055.1| hypothetical protein CICLE_v10006835mg, part... 574 e-161
ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 566 e-159
gb|ESW35784.1| hypothetical protein PHAVU_001G264300g [Phaseolus... 563 e-158
ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsi... 555 e-156
ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis t... 555 e-156
ref|NP_001031463.1| DNA topoisomerase, type IA, core [Arabidopsi... 555 e-156
gb|AAD15404.1| putative DNA topoisomerase III beta [Arabidopsis ... 555 e-156
ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 555 e-155
>ref|XP_006358794.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X2 [Solanum
tuberosum]
Length = 801
Score = 608 bits (1569), Expect = e-172
Identities = 277/321 (86%), Positives = 298/321 (92%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SISVHINNICERNYVQVQAGRRL PT LGISLIRGYQCID DLCLPDIRSFIEHQI+LVA
Sbjct: 445 SISVHINNICERNYVQVQAGRRLAPTPLGISLIRGYQCIDSDLCLPDIRSFIEHQITLVA 504
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH +VV+HV+EQF+ KFSYFVKQI+NMDALFEA+FSPLSDSGR+LSKCGKCLRYMK
Sbjct: 505 KGQADHSMVVQHVLEQFRRKFSYFVKQIDNMDALFEAQFSPLSDSGRLLSKCGKCLRYMK 564
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
+IS QP+RLYCGTCEE+YY P GT+KLYKELTCPLDNFELL+CSMPGPEGK+FP CPYC
Sbjct: 565 YISTQPARLYCGTCEEVYYVPQKGTVKLYKELTCPLDNFELLLCSMPGPEGKSFPLCPYC 624
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
+N PPFEGID FGA KT + KLGKG GMPCFLCPH TC HSVI+QGVCACPEC GTLV
Sbjct: 625 FNCPPFEGIDTFFGAPKTGDSTKLGKGVGMPCFLCPHTTCPHSVIAQGVCACPECSGTLV 684
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDP+SAP+WRLYCNMCNCLVSLPEGAHRISTT+D+CP CDSTIIEVDFNKKTTPLKDGAT
Sbjct: 685 LDPVSAPKWRLYCNMCNCLVSLPEGAHRISTTQDKCPECDSTIIEVDFNKKTTPLKDGAT 744
Query: 902 LHVGCILCDELLHSLVEMKHG 964
LH GCILCDELLHSLVEMKHG
Sbjct: 745 LHKGCILCDELLHSLVEMKHG 765
>ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Solanum
tuberosum]
Length = 860
Score = 608 bits (1569), Expect = e-172
Identities = 277/321 (86%), Positives = 298/321 (92%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SISVHINNICERNYVQVQAGRRL PT LGISLIRGYQCID DLCLPDIRSFIEHQI+LVA
Sbjct: 504 SISVHINNICERNYVQVQAGRRLAPTPLGISLIRGYQCIDSDLCLPDIRSFIEHQITLVA 563
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH +VV+HV+EQF+ KFSYFVKQI+NMDALFEA+FSPLSDSGR+LSKCGKCLRYMK
Sbjct: 564 KGQADHSMVVQHVLEQFRRKFSYFVKQIDNMDALFEAQFSPLSDSGRLLSKCGKCLRYMK 623
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
+IS QP+RLYCGTCEE+YY P GT+KLYKELTCPLDNFELL+CSMPGPEGK+FP CPYC
Sbjct: 624 YISTQPARLYCGTCEEVYYVPQKGTVKLYKELTCPLDNFELLLCSMPGPEGKSFPLCPYC 683
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
+N PPFEGID FGA KT + KLGKG GMPCFLCPH TC HSVI+QGVCACPEC GTLV
Sbjct: 684 FNCPPFEGIDTFFGAPKTGDSTKLGKGVGMPCFLCPHTTCPHSVIAQGVCACPECSGTLV 743
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDP+SAP+WRLYCNMCNCLVSLPEGAHRISTT+D+CP CDSTIIEVDFNKKTTPLKDGAT
Sbjct: 744 LDPVSAPKWRLYCNMCNCLVSLPEGAHRISTTQDKCPECDSTIIEVDFNKKTTPLKDGAT 803
Query: 902 LHVGCILCDELLHSLVEMKHG 964
LH GCILCDELLHSLVEMKHG
Sbjct: 804 LHKGCILCDELLHSLVEMKHG 824
>ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Solanum lycopersicum]
Length = 864
Score = 605 bits (1559), Expect = e-170
Identities = 275/321 (85%), Positives = 297/321 (92%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SISVHINNICERNYVQVQAGRRL PT LGISLIRGYQCID DLCLPDIRSFIEHQI+LVA
Sbjct: 504 SISVHINNICERNYVQVQAGRRLAPTPLGISLIRGYQCIDSDLCLPDIRSFIEHQITLVA 563
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH +VV+HV+EQF+ KFSYFVKQI+NMDALFEA+FSPLSDSGR+LSKCGKCLRYMK
Sbjct: 564 KGQADHSMVVQHVLEQFRRKFSYFVKQIDNMDALFEAQFSPLSDSGRLLSKCGKCLRYMK 623
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
+IS QP+RLYCGTCEE+YY P GT+KLYKELTCPLDNFELL+CSMPGPEGK+FP CPYC
Sbjct: 624 YISTQPARLYCGTCEEVYYVPQKGTVKLYKELTCPLDNFELLLCSMPGPEGKSFPLCPYC 683
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
+N PPFEGID FGA KT + KLGKG GMPCFLCPH TC HSVI+QGVCACPEC GTLV
Sbjct: 684 FNCPPFEGIDTFFGAPKTGDSTKLGKGVGMPCFLCPHTTCPHSVIAQGVCACPECSGTLV 743
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDP+SAP+WRLYCN CNCLVSLPEGAHRISTT+++CP CDSTIIEVDFNKKTTPLKDGAT
Sbjct: 744 LDPVSAPKWRLYCNTCNCLVSLPEGAHRISTTQEKCPECDSTIIEVDFNKKTTPLKDGAT 803
Query: 902 LHVGCILCDELLHSLVEMKHG 964
LH GCILCDELLHSLVEMKHG
Sbjct: 804 LHKGCILCDELLHSLVEMKHG 824
>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
Length = 894
Score = 593 bits (1530), Expect = e-167
Identities = 271/321 (84%), Positives = 296/321 (92%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SI VHINNICERN+VQVQAGR+LVPTALGISLIRGYQCIDPDLCLPDIRSFIE QI+LVA
Sbjct: 534 SIPVHINNICERNFVQVQAGRKLVPTALGISLIRGYQCIDPDLCLPDIRSFIEQQITLVA 593
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQ DH VV+HV++QFK KF YFVKQIENMDALFEA+FSPL+DSGR LSKCGKCLRYMK
Sbjct: 594 KGQVDHSRVVEHVLQQFKQKFIYFVKQIENMDALFEAQFSPLADSGRALSKCGKCLRYMK 653
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
+IS QPSR+YCGTCEE+YY P GTIKLYKELTCPLDNFELLI S+ GPEGK+FP CPYC
Sbjct: 654 YISTQPSRMYCGTCEEVYYLPQKGTIKLYKELTCPLDNFELLIFSLAGPEGKSFPLCPYC 713
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
YNSPPFEGID LFGATKT+ KLGKGAGMPCFLCPHPTC HS+I+QGVCACPEC GTLV
Sbjct: 714 YNSPPFEGIDTLFGATKTSSTGKLGKGAGMPCFLCPHPTCPHSLIAQGVCACPECSGTLV 773
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDP+SAP+WRLYCNMCNCLV LP+GAH+ISTT+DRCP C+STI+EVDFNKKTTPL DG+T
Sbjct: 774 LDPVSAPKWRLYCNMCNCLVYLPQGAHKISTTRDRCPECESTILEVDFNKKTTPLLDGST 833
Query: 902 LHVGCILCDELLHSLVEMKHG 964
L+ GCILCDELLHSLVEMKHG
Sbjct: 834 LYTGCILCDELLHSLVEMKHG 854
>ref|XP_002321105.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222861878|gb|EEE99420.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 837
Score = 590 bits (1522), Expect = e-166
Identities = 270/321 (84%), Positives = 297/321 (92%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SISVHINNICERNYVQVQAGR+LVPTALGI+LIRGYQCIDPDLCLPDIR FIE QI+LVA
Sbjct: 479 SISVHINNICERNYVQVQAGRKLVPTALGITLIRGYQCIDPDLCLPDIRGFIEQQITLVA 538
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KG+ADH VV+HV+EQFK K+SYFVKQI+NMDALFEA+FSPL+DSGR SKCGKCLRYMK
Sbjct: 539 KGEADHSCVVQHVLEQFKRKYSYFVKQIDNMDALFEAQFSPLADSGRAFSKCGKCLRYMK 598
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
+IS QPSRLYCGTCEE+YY P GTIKLYKELTCPLDNFELLI +M GPEGK+FP CP C
Sbjct: 599 YISSQPSRLYCGTCEEVYYLPQKGTIKLYKELTCPLDNFELLIFAMAGPEGKSFPLCPLC 658
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
YNSPPFEGID LFGA+KT + LGKGAGMPCFLCPHPTC+HS+I+QGVCACPEC+GTLV
Sbjct: 659 YNSPPFEGIDALFGASKTGSSGMLGKGAGMPCFLCPHPTCRHSLIAQGVCACPECNGTLV 718
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDPISAP+WRLYCNMCNCLV LP+GAHRISTT+++CP CDSTIIEVDFNK TTPL+DGAT
Sbjct: 719 LDPISAPKWRLYCNMCNCLVLLPQGAHRISTTREQCPECDSTIIEVDFNKNTTPLEDGAT 778
Query: 902 LHVGCILCDELLHSLVEMKHG 964
LHVGCILCD LLHSLVE+KHG
Sbjct: 779 LHVGCILCDNLLHSLVEVKHG 799
>gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao]
Length = 868
Score = 590 bits (1521), Expect = e-166
Identities = 268/321 (83%), Positives = 296/321 (92%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SI VHINNICERNYVQVQ GR+LVPTALGI+LIRGYQCIDPDLCLPDIRSFIEHQI+LVA
Sbjct: 507 SIPVHINNICERNYVQVQGGRKLVPTALGITLIRGYQCIDPDLCLPDIRSFIEHQITLVA 566
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQA+H VV+HV++QFK KFSYFV+QIENMDALFEA+FSPL+DSGR LSKCGKCLRYMK
Sbjct: 567 KGQANHSHVVQHVLQQFKQKFSYFVQQIENMDALFEAQFSPLADSGRALSKCGKCLRYMK 626
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
+IS QP RL+CGTCEE+Y+ P GTIKLYKELTCPLDNFELLI SMPGPEGK+FP CPYC
Sbjct: 627 YISTQPPRLFCGTCEEVYHLPQKGTIKLYKELTCPLDNFELLIFSMPGPEGKSFPLCPYC 686
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
YNSPPFEG+D LFGAT+ + KLGKGAGMPCFLCPHPTC+HSV++QGVCACPEC GTLV
Sbjct: 687 YNSPPFEGMDTLFGATRIGSSGKLGKGAGMPCFLCPHPTCRHSVVAQGVCACPECSGTLV 746
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDP+SAP+WRLYCN CNCLV LPEGAHRI+TT++RC CDSTIIEVDFNKKTTPL+DGAT
Sbjct: 747 LDPVSAPKWRLYCNKCNCLVLLPEGAHRIATTRERCAECDSTIIEVDFNKKTTPLEDGAT 806
Query: 902 LHVGCILCDELLHSLVEMKHG 964
LH GCILCDELLHS VE+KHG
Sbjct: 807 LHTGCILCDELLHSFVEVKHG 827
>ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Fragaria vesca subsp.
vesca]
Length = 862
Score = 590 bits (1521), Expect = e-166
Identities = 272/321 (84%), Positives = 298/321 (92%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SISVHINNICERNYVQVQAGR+LVPTALGI+LIRGYQCIDPDLCLPDIRSFIE QI+LVA
Sbjct: 505 SISVHINNICERNYVQVQAGRKLVPTALGITLIRGYQCIDPDLCLPDIRSFIEQQITLVA 564
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH VV+HV++QF+ K+SYFVKQIENMDALFEA+FSPL+DSGRVLSKCGKCLRYMK
Sbjct: 565 KGQADHFRVVQHVLQQFRQKYSYFVKQIENMDALFEAQFSPLADSGRVLSKCGKCLRYMK 624
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
HIS QPSRLYC TCEE+YY P GTIKLYKELTCPLDNFELLICSMPGP+GK+F CPYC
Sbjct: 625 HISTQPSRLYCNTCEEVYYLPQKGTIKLYKELTCPLDNFELLICSMPGPDGKSFSLCPYC 684
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
YNSPPFEGI+ LFGA K+ + KLGKGAGMPCFLCPHPTC+HS+I+QGVCACPEC GTLV
Sbjct: 685 YNSPPFEGINTLFGAAKSGSSGKLGKGAGMPCFLCPHPTCRHSLITQGVCACPECTGTLV 744
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDP+SAP+WRL CNMCN LV LP+GAH+ISTT DRCP CDSTIIEVDFNKKTTPL+DGAT
Sbjct: 745 LDPVSAPKWRLCCNMCNFLVLLPQGAHQISTTPDRCPECDSTIIEVDFNKKTTPLEDGAT 804
Query: 902 LHVGCILCDELLHSLVEMKHG 964
L+ GCILCDELLHSLVEMK+G
Sbjct: 805 LYSGCILCDELLHSLVEMKYG 825
>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
gi|223544485|gb|EEF46004.1| prokaryotic DNA
topoisomerase, putative [Ricinus communis]
Length = 865
Score = 585 bits (1508), Expect = e-165
Identities = 266/321 (82%), Positives = 292/321 (90%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SI VHINNICERNYVQVQAGRRL PT LGI+LIRGYQCIDPDLCLPDIRSFIE QI+LVA
Sbjct: 506 SIPVHINNICERNYVQVQAGRRLAPTILGITLIRGYQCIDPDLCLPDIRSFIEQQITLVA 565
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH VV+HV++QFK KF+YFVKQI+NMDALFEA+FS L DSGR LSKCGKCLRYMK
Sbjct: 566 KGQADHSRVVQHVLQQFKQKFTYFVKQIDNMDALFEAQFSQLVDSGRALSKCGKCLRYMK 625
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
+IS QP RLYCGTCEE+YY P GTIKLYKELTCPLDNFELLI SM GPEGK FP CPYC
Sbjct: 626 YISTQPPRLYCGTCEEVYYLPQKGTIKLYKELTCPLDNFELLIFSMAGPEGKTFPLCPYC 685
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
YN+PPFEG+D LFGA+K KLGKGAGMPCFLCPHPTC+HS+I+QGVCACPEC GTLV
Sbjct: 686 YNNPPFEGVDTLFGASKNGNFGKLGKGAGMPCFLCPHPTCRHSLIAQGVCACPECSGTLV 745
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDP+SAP+WRLYCNMCNCLV LP+GAHRI+TT++RCP CDSTIIEVDFNK TTPL+DGAT
Sbjct: 746 LDPVSAPKWRLYCNMCNCLVLLPQGAHRIATTRERCPECDSTIIEVDFNKNTTPLEDGAT 805
Query: 902 LHVGCILCDELLHSLVEMKHG 964
LH+GCILCD+LLHSLVE+KHG
Sbjct: 806 LHIGCILCDDLLHSLVEVKHG 826
>gb|EMJ26496.1| hypothetical protein PRUPE_ppa001274mg [Prunus persica]
Length = 866
Score = 580 bits (1494), Expect = e-163
Identities = 266/321 (82%), Positives = 296/321 (92%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SISVHINNICERNYVQV AGR+L PTALGI+LIRGYQCIDPDLCLPDIRSFIE QI+LVA
Sbjct: 505 SISVHINNICERNYVQVLAGRKLGPTALGITLIRGYQCIDPDLCLPDIRSFIEQQITLVA 564
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH VV+HV++QF+ K+SYFVKQIENMDALFEA+FSPL+DSGRVLSKCGKCLRYMK
Sbjct: 565 KGQADHFRVVQHVLQQFRQKYSYFVKQIENMDALFEAQFSPLADSGRVLSKCGKCLRYMK 624
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
HIS QPSRLYC TCEE+YY P G+IKLYKELTCPLDNFELLI SMPGP+GK+FP CPYC
Sbjct: 625 HISTQPSRLYCNTCEEVYYLPQKGSIKLYKELTCPLDNFELLIFSMPGPDGKSFPLCPYC 684
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
YNSPPFEGID LFGA K+ + +LGKGAGMPCFLCPHPTC+HS+I+QGVCACPEC GTLV
Sbjct: 685 YNSPPFEGIDTLFGAVKSGPSSQLGKGAGMPCFLCPHPTCRHSLIAQGVCACPECSGTLV 744
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDP+SAP+WRL CNMCN LV LPEGAH+ISTT++RCP CDSTI+EVDFNKKTTPL++G T
Sbjct: 745 LDPVSAPKWRLCCNMCNFLVLLPEGAHQISTTRERCPECDSTILEVDFNKKTTPLENGET 804
Query: 902 LHVGCILCDELLHSLVEMKHG 964
L+ GCILCDELLHSLVEMK+G
Sbjct: 805 LYTGCILCDELLHSLVEMKYG 825
>ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X3 [Citrus
sinensis]
Length = 867
Score = 575 bits (1482), Expect = e-162
Identities = 260/321 (80%), Positives = 292/321 (90%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SI VHINNICERNYVQVQAGR+L PT LGI+LIRGYQCIDPDLCLPDIRSFIE QI+LVA
Sbjct: 506 SIPVHINNICERNYVQVQAGRKLAPTTLGITLIRGYQCIDPDLCLPDIRSFIEQQITLVA 565
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH VV+HV++QF+ K+SYFVKQIENMDALFEA+FSPLS+SGRVLSKCGKCLRYMK
Sbjct: 566 KGQADHSGVVQHVLQQFRQKYSYFVKQIENMDALFEAQFSPLSNSGRVLSKCGKCLRYMK 625
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
+IS QPSRLYC TCE++Y P GT+KLYKELTCPLDNFELLI SM GPEGK+FP CP+C
Sbjct: 626 YISMQPSRLYCSTCEDVYNLPQRGTLKLYKELTCPLDNFELLIFSMAGPEGKSFPLCPFC 685
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
YN+PPFEGID L+G T T KLGKGAGMPCFLCPHP C+HS+I+QGVCACPEC+GTLV
Sbjct: 686 YNNPPFEGIDTLYGTTTTGSFGKLGKGAGMPCFLCPHPACRHSMIAQGVCACPECNGTLV 745
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDP+SAP+WRLYCNMCNCLVSLP+GAHRI+TT+++CP C S IIE+DFNKKTTPL DGAT
Sbjct: 746 LDPVSAPKWRLYCNMCNCLVSLPQGAHRIATTQEQCPECGSKIIEIDFNKKTTPLDDGAT 805
Query: 902 LHVGCILCDELLHSLVEMKHG 964
LH GCILCDELLHSL+E+KHG
Sbjct: 806 LHTGCILCDELLHSLIEVKHG 826
>ref|XP_006492982.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Citrus
sinensis] gi|568880120|ref|XP_006492983.1| PREDICTED: DNA
topoisomerase 3-beta-1-like isoform X2 [Citrus sinensis]
Length = 898
Score = 575 bits (1482), Expect = e-162
Identities = 260/321 (80%), Positives = 292/321 (90%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SI VHINNICERNYVQVQAGR+L PT LGI+LIRGYQCIDPDLCLPDIRSFIE QI+LVA
Sbjct: 537 SIPVHINNICERNYVQVQAGRKLAPTTLGITLIRGYQCIDPDLCLPDIRSFIEQQITLVA 596
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH VV+HV++QF+ K+SYFVKQIENMDALFEA+FSPLS+SGRVLSKCGKCLRYMK
Sbjct: 597 KGQADHSGVVQHVLQQFRQKYSYFVKQIENMDALFEAQFSPLSNSGRVLSKCGKCLRYMK 656
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
+IS QPSRLYC TCE++Y P GT+KLYKELTCPLDNFELLI SM GPEGK+FP CP+C
Sbjct: 657 YISMQPSRLYCSTCEDVYNLPQRGTLKLYKELTCPLDNFELLIFSMAGPEGKSFPLCPFC 716
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
YN+PPFEGID L+G T T KLGKGAGMPCFLCPHP C+HS+I+QGVCACPEC+GTLV
Sbjct: 717 YNNPPFEGIDTLYGTTTTGSFGKLGKGAGMPCFLCPHPACRHSMIAQGVCACPECNGTLV 776
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDP+SAP+WRLYCNMCNCLVSLP+GAHRI+TT+++CP C S IIE+DFNKKTTPL DGAT
Sbjct: 777 LDPVSAPKWRLYCNMCNCLVSLPQGAHRIATTQEQCPECGSKIIEIDFNKKTTPLDDGAT 836
Query: 902 LHVGCILCDELLHSLVEMKHG 964
LH GCILCDELLHSL+E+KHG
Sbjct: 837 LHTGCILCDELLHSLIEVKHG 857
>gb|EXB54788.1| DNA topoisomerase 3-beta-1 [Morus notabilis]
Length = 641
Score = 574 bits (1479), Expect = e-161
Identities = 261/321 (81%), Positives = 291/321 (90%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SI VH+NNICERNYV+VQAGR+LVPT LGI+LIRGYQCIDPDLCLPDIRSFIE Q++LVA
Sbjct: 280 SIPVHVNNICERNYVKVQAGRKLVPTPLGITLIRGYQCIDPDLCLPDIRSFIEQQLTLVA 339
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH V++HV++QFK KFSYFVKQI+ MDALFEA+FSP+++SGRVLSKCGKCLRYMK
Sbjct: 340 KGQADHICVLQHVLQQFKQKFSYFVKQIDKMDALFEAQFSPVANSGRVLSKCGKCLRYMK 399
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
+IS QPSRLYC TCEEIYY P GTIKLYKELTCPLDNFELLI S PGPEGK+FP CPYC
Sbjct: 400 YISSQPSRLYCNTCEEIYYLPQKGTIKLYKELTCPLDNFELLIFSRPGPEGKSFPLCPYC 459
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
YN+PPFEGID LFG KT KLG+G GMPC LCPHPTCQHS+I+QGVCACPEC GTLV
Sbjct: 460 YNTPPFEGIDTLFGGAKTGSLNKLGEGVGMPCSLCPHPTCQHSMITQGVCACPECSGTLV 519
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDP+SAP+WRL CN CNCLV LP+GAHRISTT+D+CP+CDSTIIEVDFNKKTTPL+DGAT
Sbjct: 520 LDPVSAPKWRLNCNTCNCLVFLPQGAHRISTTRDQCPDCDSTIIEVDFNKKTTPLEDGAT 579
Query: 902 LHVGCILCDELLHSLVEMKHG 964
L+ GCILCDE LHSL+EMKHG
Sbjct: 580 LYTGCILCDEFLHSLLEMKHG 600
>ref|XP_006421055.1| hypothetical protein CICLE_v10006835mg, partial [Citrus clementina]
gi|557522928|gb|ESR34295.1| hypothetical protein
CICLE_v10006835mg, partial [Citrus clementina]
Length = 445
Score = 574 bits (1479), Expect = e-161
Identities = 259/321 (80%), Positives = 292/321 (90%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SI VHINNICERNYVQVQAGR+L PT LGI+LIRGYQCIDPDLCLPDIRSFIE QI+LVA
Sbjct: 84 SIPVHINNICERNYVQVQAGRKLAPTTLGITLIRGYQCIDPDLCLPDIRSFIEQQITLVA 143
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH VV+HV++QF+ K+SYFVKQIENMDALFEA+FSPLS+SGRVLSKCGKCLRYMK
Sbjct: 144 KGQADHSGVVQHVLQQFRQKYSYFVKQIENMDALFEAQFSPLSNSGRVLSKCGKCLRYMK 203
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
+IS QPSRLYC TCE++Y P GT+KLYKELTCPLDNFELLI SM GPEGK+FP CP+C
Sbjct: 204 YISMQPSRLYCSTCEDVYNLPQRGTLKLYKELTCPLDNFELLIFSMAGPEGKSFPLCPFC 263
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
YN+PPFEGID L+G T T KLGKGAGMPCFLCPHP C+HS+++QGVCACPEC+GTLV
Sbjct: 264 YNNPPFEGIDTLYGTTTTGSFGKLGKGAGMPCFLCPHPACRHSMMAQGVCACPECNGTLV 323
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDP+SAP+WRLYCNMCNCLVSLP+GAHRI+TT+++CP C S IIE+DFNKKTTPL DGAT
Sbjct: 324 LDPVSAPKWRLYCNMCNCLVSLPQGAHRIATTQEQCPECGSKIIEIDFNKKTTPLDDGAT 383
Query: 902 LHVGCILCDELLHSLVEMKHG 964
LH GCILCDELLHSL+E+KHG
Sbjct: 384 LHTGCILCDELLHSLIEVKHG 404
>ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Glycine max]
Length = 863
Score = 566 bits (1459), Expect = e-159
Identities = 260/321 (80%), Positives = 288/321 (89%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SI VHINNICERNYVQVQAGR+LVPT LGI+L+RGYQ IDPDLCLPDIRSFIE QI+L+A
Sbjct: 504 SIPVHINNICERNYVQVQAGRKLVPTTLGITLVRGYQTIDPDLCLPDIRSFIEQQITLIA 563
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQ DH VV+HVI+QF KFSYFVK+IE+MDALFEA+FS L+DSGR+LSKCGKCLRYMK
Sbjct: 564 KGQVDHRHVVQHVIQQFTQKFSYFVKKIEDMDALFEAQFSTLTDSGRILSKCGKCLRYMK 623
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
IS QPSRLYCGTCEE+YY P GTIKLYKEL+CPLDNFELLICSMPGP+GK+FP CPYC
Sbjct: 624 FISTQPSRLYCGTCEEVYYLPQKGTIKLYKELSCPLDNFELLICSMPGPDGKSFPLCPYC 683
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
Y +PPFEGI+ L KT + K+GKGAGMPC LCPHPTC +S++SQGVCACPEC GTLV
Sbjct: 684 YINPPFEGIETLINTAKTGTSGKIGKGAGMPCNLCPHPTCPNSLVSQGVCACPECSGTLV 743
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDP+SAPRW+L CNMCNCLV L +GAHRISTTKDRCP CDS+IIEVDFNKKTTPL+DGAT
Sbjct: 744 LDPVSAPRWKLCCNMCNCLVFLAQGAHRISTTKDRCPECDSSIIEVDFNKKTTPLEDGAT 803
Query: 902 LHVGCILCDELLHSLVEMKHG 964
LH GCILCDELLHSLVEMKHG
Sbjct: 804 LHHGCILCDELLHSLVEMKHG 824
>gb|ESW35784.1| hypothetical protein PHAVU_001G264300g [Phaseolus vulgaris]
Length = 862
Score = 563 bits (1452), Expect = e-158
Identities = 258/321 (80%), Positives = 289/321 (90%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SI VHINNICERNYVQVQAGR+LVPT LGI+L+RGYQ IDPDLCLPDIRSFIE QI+L+A
Sbjct: 504 SIPVHINNICERNYVQVQAGRKLVPTPLGITLVRGYQTIDPDLCLPDIRSFIEQQITLIA 563
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQ DH VV+HVI+QF KFSYFVK+IE+MDALFEA+FS L++SGR+LSKCGKCLRYMK
Sbjct: 564 KGQVDHRHVVQHVIQQFTQKFSYFVKKIEDMDALFEAQFSTLTESGRILSKCGKCLRYMK 623
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
+IS QP RLYCGTCEE+YY P G IKLYKEL+CPLDNFELLICSMPGP+GK+FP CPYC
Sbjct: 624 YISTQPPRLYCGTCEEVYYLPQKGIIKLYKELSCPLDNFELLICSMPGPDGKSFPLCPYC 683
Query: 542 YNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTLV 721
Y++PPFEGI+ L TKT A K+GKG+GMPC LCPHP+C +S++SQGVCACPEC GTLV
Sbjct: 684 YSNPPFEGIEALINTTKTGSAGKIGKGSGMPCSLCPHPSCPNSLVSQGVCACPECSGTLV 743
Query: 722 LDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGAT 901
LDPISAPRWRL CNMCNCLV L +GAHRISTTK+RCP CDS+IIEVDFNKKTTPL+DGAT
Sbjct: 744 LDPISAPRWRLCCNMCNCLVFLAQGAHRISTTKERCPECDSSIIEVDFNKKTTPLEDGAT 803
Query: 902 LHVGCILCDELLHSLVEMKHG 964
LH GCILCDELLHSLVEMKHG
Sbjct: 804 LHRGCILCDELLHSLVEMKHG 824
>ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297327049|gb|EFH57469.1| DNA topoisomerase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 555 bits (1431), Expect = e-156
Identities = 256/322 (79%), Positives = 289/322 (89%), Gaps = 1/322 (0%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SI VHINNI ERNYVQVQAGR+LVPTALGI+LIRGYQCIDPDLCLPDIRSFIE QI+LVA
Sbjct: 507 SIPVHINNIGERNYVQVQAGRKLVPTALGITLIRGYQCIDPDLCLPDIRSFIEQQITLVA 566
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH VV+HVI+QF+ KFSYFV+QIE+MDALFEA+FSPL+DSGR LSKCGKCLRYMK
Sbjct: 567 KGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDALFEAQFSPLADSGRALSKCGKCLRYMK 626
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
HI+ P RL+CGTCEE+YY P GTIKLYKELTCPLDNFEL+I S+PGPEGK+FP CPYC
Sbjct: 627 HITAVPPRLFCGTCEEVYYLPQKGTIKLYKELTCPLDNFELVIYSVPGPEGKSFPLCPYC 686
Query: 542 YNSPPFEGIDNLFGATKTAGA-IKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTL 718
YNSPPFEGID LFGA+KT A K G+GMPC LCPHPTCQHSV +QGVCACPEC+GTL
Sbjct: 687 YNSPPFEGIDTLFGASKTPNAPAKTKTGSGMPCSLCPHPTCQHSVRNQGVCACPECEGTL 746
Query: 719 VLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGA 898
VLDP+S P+W+L CN+C+C+V LPEGAHRI+TT +RCP CDS IIE+DFNKKTTPL++GA
Sbjct: 747 VLDPVSFPKWKLNCNLCSCIVLLPEGAHRIATTSNRCPECDSAIIEIDFNKKTTPLENGA 806
Query: 899 TLHVGCILCDELLHSLVEMKHG 964
TLH GC+LCDELL SLVE+KHG
Sbjct: 807 TLHQGCVLCDELLLSLVEVKHG 828
>ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
gi|330253525|gb|AEC08619.1| DNA topoisomerase, type IA,
core [Arabidopsis thaliana]
Length = 865
Score = 555 bits (1430), Expect = e-156
Identities = 254/322 (78%), Positives = 290/322 (90%), Gaps = 1/322 (0%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SI+VHINNI ERNYVQVQ+GR++VPTALGI+LIRGYQCIDPDLCLPDIRSFIE QI+LVA
Sbjct: 507 SIAVHINNIGERNYVQVQSGRKMVPTALGITLIRGYQCIDPDLCLPDIRSFIEQQITLVA 566
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH VV+HVI+QF+ KFSYFV+QIE+MDALFEA+FSPL+DSGR LSKCGKCLRYMK
Sbjct: 567 KGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDALFEAQFSPLADSGRALSKCGKCLRYMK 626
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
HI+ P RL+CGTCEE+YY P GT+KLYKELTCPLDNFEL+I S+PGPEGK+FP CPYC
Sbjct: 627 HITAVPPRLFCGTCEEVYYLPQKGTVKLYKELTCPLDNFELVIYSVPGPEGKSFPLCPYC 686
Query: 542 YNSPPFEGIDNLFGATKTAGA-IKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTL 718
YNSPPFEGID LFGA+KT A K GAGMPC LCPHPTCQHSV +QGVCACPEC+GTL
Sbjct: 687 YNSPPFEGIDTLFGASKTPNAPAKTKTGAGMPCSLCPHPTCQHSVRNQGVCACPECEGTL 746
Query: 719 VLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGA 898
VLDP+S P+W+L CN+C+C+V LPEGAHRI+TT +RCP CDS IIE+DFNKKTTPL++GA
Sbjct: 747 VLDPVSFPKWKLNCNLCSCIVLLPEGAHRITTTSNRCPECDSAIIEIDFNKKTTPLENGA 806
Query: 899 TLHVGCILCDELLHSLVEMKHG 964
TLH GC+LCDELL SLVE+KHG
Sbjct: 807 TLHQGCVLCDELLLSLVEVKHG 828
>ref|NP_001031463.1| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
gi|51969720|dbj|BAD43552.1| putative DNA topoisomerase
III beta [Arabidopsis thaliana]
gi|51969988|dbj|BAD43686.1| putative DNA topoisomerase
III beta [Arabidopsis thaliana]
gi|330253526|gb|AEC08620.1| DNA topoisomerase, type IA,
core [Arabidopsis thaliana]
Length = 838
Score = 555 bits (1430), Expect = e-156
Identities = 254/322 (78%), Positives = 290/322 (90%), Gaps = 1/322 (0%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SI+VHINNI ERNYVQVQ+GR++VPTALGI+LIRGYQCIDPDLCLPDIRSFIE QI+LVA
Sbjct: 480 SIAVHINNIGERNYVQVQSGRKMVPTALGITLIRGYQCIDPDLCLPDIRSFIEQQITLVA 539
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH VV+HVI+QF+ KFSYFV+QIE+MDALFEA+FSPL+DSGR LSKCGKCLRYMK
Sbjct: 540 KGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDALFEAQFSPLADSGRALSKCGKCLRYMK 599
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
HI+ P RL+CGTCEE+YY P GT+KLYKELTCPLDNFEL+I S+PGPEGK+FP CPYC
Sbjct: 600 HITAVPPRLFCGTCEEVYYLPQKGTVKLYKELTCPLDNFELVIYSVPGPEGKSFPLCPYC 659
Query: 542 YNSPPFEGIDNLFGATKTAGA-IKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTL 718
YNSPPFEGID LFGA+KT A K GAGMPC LCPHPTCQHSV +QGVCACPEC+GTL
Sbjct: 660 YNSPPFEGIDTLFGASKTPNAPAKTKTGAGMPCSLCPHPTCQHSVRNQGVCACPECEGTL 719
Query: 719 VLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGA 898
VLDP+S P+W+L CN+C+C+V LPEGAHRI+TT +RCP CDS IIE+DFNKKTTPL++GA
Sbjct: 720 VLDPVSFPKWKLNCNLCSCIVLLPEGAHRITTTSNRCPECDSAIIEIDFNKKTTPLENGA 779
Query: 899 TLHVGCILCDELLHSLVEMKHG 964
TLH GC+LCDELL SLVE+KHG
Sbjct: 780 TLHQGCVLCDELLLSLVEVKHG 801
>gb|AAD15404.1| putative DNA topoisomerase III beta [Arabidopsis thaliana]
Length = 836
Score = 555 bits (1430), Expect = e-156
Identities = 254/322 (78%), Positives = 290/322 (90%), Gaps = 1/322 (0%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SI+VHINNI ERNYVQVQ+GR++VPTALGI+LIRGYQCIDPDLCLPDIRSFIE QI+LVA
Sbjct: 478 SIAVHINNIGERNYVQVQSGRKMVPTALGITLIRGYQCIDPDLCLPDIRSFIEQQITLVA 537
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH VV+HVI+QF+ KFSYFV+QIE+MDALFEA+FSPL+DSGR LSKCGKCLRYMK
Sbjct: 538 KGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDALFEAQFSPLADSGRALSKCGKCLRYMK 597
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
HI+ P RL+CGTCEE+YY P GT+KLYKELTCPLDNFEL+I S+PGPEGK+FP CPYC
Sbjct: 598 HITAVPPRLFCGTCEEVYYLPQKGTVKLYKELTCPLDNFELVIYSVPGPEGKSFPLCPYC 657
Query: 542 YNSPPFEGIDNLFGATKTAGA-IKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTL 718
YNSPPFEGID LFGA+KT A K GAGMPC LCPHPTCQHSV +QGVCACPEC+GTL
Sbjct: 658 YNSPPFEGIDTLFGASKTPNAPAKTKTGAGMPCSLCPHPTCQHSVRNQGVCACPECEGTL 717
Query: 719 VLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGA 898
VLDP+S P+W+L CN+C+C+V LPEGAHRI+TT +RCP CDS IIE+DFNKKTTPL++GA
Sbjct: 718 VLDPVSFPKWKLNCNLCSCIVLLPEGAHRITTTSNRCPECDSAIIEIDFNKKTTPLENGA 777
Query: 899 TLHVGCILCDELLHSLVEMKHG 964
TLH GC+LCDELL SLVE+KHG
Sbjct: 778 TLHQGCVLCDELLLSLVEVKHG 799
>ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
Length = 864
Score = 555 bits (1429), Expect = e-155
Identities = 256/322 (79%), Positives = 287/322 (89%), Gaps = 1/322 (0%)
Frame = +2
Query: 2 SISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQISLVA 181
SI VHINNI ERNYVQVQAGRRLVPT LGI+LIRGYQCIDPDLCLPDIRSFIEHQI+LVA
Sbjct: 503 SIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRGYQCIDPDLCLPDIRSFIEHQITLVA 562
Query: 182 KGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKCLRYMK 361
KGQADH VV+ V++QF+ K+SYFVK+I++MDALFEA+FSPL+DSGR LSKCGKCLRYMK
Sbjct: 563 KGQADHSSVVQSVLQQFRQKYSYFVKKIDHMDALFEAQFSPLADSGRALSKCGKCLRYMK 622
Query: 362 HISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFPFCPYC 541
IS QP RLYCG CEE+YY P GTIKLYKELTCPLDNFELLI S+PGPEGK+FP CPYC
Sbjct: 623 FISSQPQRLYCGICEEVYYLPQKGTIKLYKELTCPLDNFELLIYSLPGPEGKSFPLCPYC 682
Query: 542 YNSPPFEGIDNLFGATK-TAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPECDGTL 718
YNSPPFEGI+ L+GA+K + KG GMPCF+CPHPTC+HS+I+QGVCACPEC GTL
Sbjct: 683 YNSPPFEGINTLYGASKANPSSGTSSKGMGMPCFMCPHPTCRHSLITQGVCACPECSGTL 742
Query: 719 VLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPLKDGA 898
VLDP+SAP W+L CN CNCLV LP+GAHRISTT+D+C +CDSTIIEVDFNKKTTPL+DGA
Sbjct: 743 VLDPVSAPNWKLNCNKCNCLVFLPKGAHRISTTRDKCADCDSTIIEVDFNKKTTPLEDGA 802
Query: 899 TLHVGCILCDELLHSLVEMKHG 964
TL VGCILCDE LHSL+EMKHG
Sbjct: 803 TLFVGCILCDEFLHSLLEMKHG 824