BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00026609
         (1071 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004296329.1| PREDICTED: uncharacterized protein LOC101295...   228   3e-77
gb|ABA95357.2| retrotransposon protein, putative, unclassified [...   208   3e-68
gb|ABA93896.1| retrotransposon protein, putative, unclassified [...   196   4e-68
gb|AAS55774.2| putative polyprotein [Oryza sativa Japonica Group]     197   1e-66
gb|ABA99961.1| retrotransposon protein, putative, unclassified [...   199   2e-66
gb|EMJ17505.1| hypothetical protein PRUPE_ppa019597mg, partial [...   189   2e-66
ref|XP_002437407.1| hypothetical protein SORBIDRAFT_10g026363 [S...   193   1e-65
emb|CAE05274.1| OSJNBb0014D23.8 [Oryza sativa Japonica Group]         194   3e-65
gb|AAP54937.2| retrotransposon protein, putative, unclassified [...   186   6e-65
gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]              184   7e-65
gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Ja...   189   3e-64
gb|ABF93966.1| retrotransposon protein, putative, unclassified, ...   189   3e-64
gb|ABA95339.2| retrotransposon protein, putative, unclassified [...   180   1e-63
gb|AAO23078.1| polyprotein [Glycine max]                              249   2e-63
ref|XP_002443119.1| hypothetical protein SORBIDRAFT_08g009520 [S...   188   1e-62
emb|CAE04934.2| OSJNBa0017P10.11 [Oryza sativa Japonica Group]        181   1e-62
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        197   4e-62
gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein ...   196   7e-62
ref|XP_002443111.1| hypothetical protein SORBIDRAFT_08g008675 [S...   173   7e-60
gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Jap...   193   1e-59

>ref|XP_004296329.1| PREDICTED: uncharacterized protein LOC101295505 [Fragaria vesca
            subsp. vesca]
          Length = 2814

 Score =  228 bits (582), Expect(2) = 3e-77
 Identities = 123/270 (45%), Positives = 154/270 (57%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F S FW+  F L GT L+ SSAYHPQ DGQTE+LNRTLE YLR  V + P++W K L WA
Sbjct: 1855 FMSLFWEAFFALQGTKLSKSSAYHPQSDGQTENLNRTLEQYLRCVVGEKPQDWVKCLAWA 1914

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            E+WYN++YHT+  M+ F A YG                A  D  LR+R+           
Sbjct: 1915 EWWYNSAYHTAIAMSPFEARYGYPPPPVIPYIPGSTVIAQADEQLRKREELLALLKRNLQ 1974

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                RMK+  DK   E+SF V + V+LKLQPY+Q SM+     KL  +Y+GPF++LEKIG
Sbjct: 1975 RAQARMKHFHDKRHTERSFEVGDMVYLKLQPYKQHSMQRGVFNKLSARYYGPFEVLEKIG 2034

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQLDPLKVCDYHVIL 960
            +VAYKLKLP + RIHNVFHVSLLKK  G Q            P  P+  P  V    ++ 
Sbjct: 2035 SVAYKLKLPPTARIHNVFHVSLLKKKLGDQTPVLADLPPIIDPTNPKWAPAAVFGRRMVK 2094

Query: 961  KQGQPSQQVLVQWVNFPEEDATWMDISEFQ 1050
            K G  + Q LV W+    E+ATW    E Q
Sbjct: 2095 KAGAAATQWLVHWIGTTPEEATWEFAEEMQ 2124



 Score = 88.2 bits (217), Expect(2) = 3e-77
 Identities = 44/88 (50%), Positives = 57/88 (64%)
 Frame = +3

Query: 3    PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
            PL IP + W +IS+DFI GLP S+  T + V+VD L+KYAHF+PLA   T+A +A IF  
Sbjct: 1776 PLSIPERAWSEISMDFIDGLPKSEGKTTVWVIVDKLTKYAHFIPLAHPYTAATLAQIFVK 1835

Query: 183  GVVKLHGFPRPMVSYRDKKFSEFFLERF 266
             + KLHG P  ++S RD  F   F E F
Sbjct: 1836 EIFKLHGMPDNIISDRDPIFMSLFWEAF 1863


>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2811

 Score =  208 bits (530), Expect(2) = 3e-68
 Identities = 113/282 (40%), Positives = 154/282 (54%), Gaps = 8/282 (2%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F SS WK+LF+  GT L MSS+YHPQ DGQTE +N+ +EM+LR FV   P  W  +L  A
Sbjct: 2485 FTSSLWKELFRRAGTQLRMSSSYHPQSDGQTERVNQCVEMFLRCFVHSCPSRWKHWLALA 2544

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            ++WYNTS+H++ GMT F  ++G                  L   L +R+           
Sbjct: 2545 QYWYNTSFHSALGMTPFEVLFGHKPRYFGLSTSSVDAPGDLATWLSERNDMNTLIHHHLL 2604

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                RMK+QAD  R E+ F V +WVF+KLQPY Q S    +N+KL  KY+GPFQ+L++IG
Sbjct: 2605 RAQQRMKSQADLKRSERCFVVGDWVFMKLQPYIQQSFMTRSNRKLSFKYYGPFQVLQRIG 2664

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQLD--------PLK 936
            +VAY+L+LP    IH V HVS LKKA                P LP L+        P+K
Sbjct: 2665 SVAYRLQLPAHSLIHPVVHVSQLKKA--------LAPSEAVQPSLPVLNPDAGHLAIPIK 2716

Query: 937  VCDYHVILKQGQPSQQVLVQWVNFPEEDATWMDISEFQATYP 1062
            + D+  I +  +  +QVL++W        TW  + E QA +P
Sbjct: 2717 ILDHCSIRRGSKMIKQVLIRWSGVSSSADTWESLDEMQAKFP 2758



 Score = 78.2 bits (191), Expect(2) = 3e-68
 Identities = 38/81 (46%), Positives = 53/81 (65%)
 Frame = +3

Query: 3    PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
            PL +P Q W+ I++DFI GLP S  +  ILV+VD  SK+AHFLPL    T+  VA +F  
Sbjct: 2406 PLEVPSQSWQVITMDFIEGLPKSASFDCILVIVDKFSKFAHFLPLKHPFTAFGVAQLFME 2465

Query: 183  GVVKLHGFPRPMVSYRDKKFS 245
             +  +HG P+ +VS RD+ F+
Sbjct: 2466 HIHSIHGLPQAIVSDRDRVFT 2486


>gb|ABA93896.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 897

 Score =  196 bits (497), Expect(2) = 4e-68
 Identities = 108/279 (38%), Positives = 147/279 (52%), Gaps = 5/279 (1%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F S+ W +LF L  T L MSSAYHPQ+DGQTE +N+ LE +LR FV   P  WS++L  A
Sbjct: 620  FTSALWTELFHLADTQLQMSSAYHPQIDGQTERVNQCLETFLRCFVHSCPSRWSRWLALA 679

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            EFWYNT+YH++ G + F  +YG                A L    ++R            
Sbjct: 680  EFWYNTAYHSALGSSPFEVLYGHPPRHFGVLDGVTYAVADLQEWRKERTMVTSLLRQHLL 739

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                RMK+QADK   ++ F + +WVFLK QPY Q S+   TN KL  +YFGP Q+L+KIG
Sbjct: 740  RAQQRMKDQADKHCSDRVFCIGDWVFLKAQPYAQTSLAVRTNHKLAFRYFGPCQVLDKIG 799

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQLD-----PLKVCD 945
            AVAY LKLP+   IH   HVS L+KA    +             LP L+     PL++  
Sbjct: 800  AVAYCLKLPEDCTIHPAVHVSQLRKAAQPSVGEPIRP-------LPALEQDSPVPLQILL 852

Query: 946  YHVILKQGQPSQQVLVQWVNFPEEDATWMDISEFQATYP 1062
               + +     +QV V+W      ++TW D +  +  +P
Sbjct: 853  CRAVRRGAATIEQVKVRWSGQTSAESTWEDAAALRNQFP 891



 Score = 90.5 bits (223), Expect(2) = 4e-68
 Identities = 45/81 (55%), Positives = 56/81 (69%)
 Frame = +3

Query: 3   PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
           PLP+P Q WE +SLDFI GLP S  +  ILVVVD  S+YAHFL LA   T+  VA ++ N
Sbjct: 541 PLPVPDQAWETVSLDFIEGLPKSSGFDCILVVVDKFSRYAHFLGLAHPFTAFDVAFLYLN 600

Query: 183 GVVKLHGFPRPMVSYRDKKFS 245
            V KLHG P  ++SYRD+ F+
Sbjct: 601 NVYKLHGLPLTIISYRDRIFT 621


>gb|AAS55774.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 2108

 Score =  197 bits (502), Expect(2) = 1e-66
 Identities = 99/206 (48%), Positives = 131/206 (63%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F S FWK+LF+  GT L MSS+YHPQ DGQTE +N+ LEM+LR FV   P  WSK+L  A
Sbjct: 1896 FTSIFWKELFRRSGTQLQMSSSYHPQTDGQTERVNQCLEMFLRCFVHACPSRWSKWLSLA 1955

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            +FWYNTS+H++  +T F A++G                +ALD+ ++ R            
Sbjct: 1956 QFWYNTSFHSTLMLTPFEAMFGHKPRHFGLSVDSVGVPSALDSWMQDRHNMQSLIYHHLV 2015

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                RMK+QAD  R ++ F V +WVF+KLQPY Q S+    NQKL  K++GPFQIL+++G
Sbjct: 2016 RAQQRMKSQADSKRTDRVFAVGDWVFMKLQPYVQQSVMTRANQKLAFKFYGPFQILQRVG 2075

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKA 858
            +VAYKL+LP +  IH V HVS LKKA
Sbjct: 2076 SVAYKLQLPATSLIHPVVHVSQLKKA 2101



 Score = 84.0 bits (206), Expect(2) = 1e-66
 Identities = 38/84 (45%), Positives = 55/84 (65%)
 Frame = +3

Query: 3    PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
            P+ IP   W+ IS+DFI GLP S  Y  ILV+VD  +K+AHFLPL+   T+  VA +F +
Sbjct: 1817 PVQIPEHAWQVISMDFIEGLPRSASYNSILVIVDKFTKFAHFLPLSHPFTAVSVAQLFMD 1876

Query: 183  GVVKLHGFPRPMVSYRDKKFSEFF 254
             +  +HG P+ ++S RD+ F+  F
Sbjct: 1877 RIHSIHGLPQAIISDRDRVFTSIF 1900


>gb|ABA99961.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1619

 Score =  199 bits (506), Expect(2) = 2e-66
 Identities = 110/282 (39%), Positives = 152/282 (53%), Gaps = 8/282 (2%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F S+ W  LF+L GT L MSS+YHPQ D QTE +N+ L+ +LR FV  +P +WS++L  A
Sbjct: 1285 FTSNLWTTLFRLAGTQLRMSSSYHPQSDRQTERMNQCLKTFLRCFVHASPSQWSRWLALA 1344

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            E+WYNTS+H+S G T F  +YG                  L + L +RD           
Sbjct: 1345 EYWYNTSFHSSLGTTPFEVLYGHKPRYFGLTASAACSAPELSDWLHERDKMQTLIREHLL 1404

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                RMK+QAD    E+SF V +WV++KLQP+ Q S+   TN+KL  +++GPFQ+L K+G
Sbjct: 1405 RAQMRMKHQADTKHSERSFAVGDWVYMKLQPFVQQSVVTCTNRKLSFRFYGPFQVLAKVG 1464

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQLD--------PLK 936
            +VAY+L LP S  IH V HVS L KA               +  LP LD        P +
Sbjct: 1465 SVAYRLDLPPSCLIHPVIHVSQLNKA--------VAPSDQVHSKLPILDDADAVTPVPQQ 1516

Query: 937  VCDYHVILKQGQPSQQVLVQWVNFPEEDATWMDISEFQATYP 1062
            V D   + K  +  +QVL++W        TW ++ E Q  +P
Sbjct: 1517 VIDRRSVHKGAKMVEQVLIRWSGPDSAVVTWENLQELQQRFP 1558



 Score = 81.6 bits (200), Expect(2) = 2e-66
 Identities = 39/81 (48%), Positives = 55/81 (67%)
 Frame = +3

Query: 3    PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
            PLP+P Q W+ +SLDFI GLP S  +  ILVVVD  SKYAHF+ LA   T+ +VA+ +  
Sbjct: 1206 PLPVPEQSWQIVSLDFIEGLPRSSTFNCILVVVDKFSKYAHFVALAHPFTTLEVAEAYMQ 1265

Query: 183  GVVKLHGFPRPMVSYRDKKFS 245
             + +LHG P  ++S +D+ F+
Sbjct: 1266 HIHRLHGLPEAIISDQDRIFT 1286


>gb|EMJ17505.1| hypothetical protein PRUPE_ppa019597mg, partial [Prunus persica]
          Length = 1392

 Score =  189 bits (481), Expect(2) = 2e-66
 Identities = 107/270 (39%), Positives = 137/270 (50%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F S FW   F   GT L                LNRTLE YLR FV D P  W  +L WA
Sbjct: 1135 FTSQFWTSFFTHQGTKL-------------CHILNRTLEHYLRCFVGDKPTSWVSWLPWA 1181

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            E+WYNT+YH++  MT + AVYG+                A+D  LR RD           
Sbjct: 1182 EWWYNTTYHSAIKMTPYQAVYGQPPPSVEFYTSGSSAVQAVDLALRDRDTLLRRLRQNMQ 1241

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                RM   A+  R E+ F+VD+WVFL+LQPYRQ +M      KL  +++GP++IL KIG
Sbjct: 1242 IAQERMTFFANHKRSERHFDVDDWVFLRLQPYRQSTMGTSNCPKLSPRFYGPYKILAKIG 1301

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQLDPLKVCDYHVIL 960
              AYKL LP   +IHNVFHVSLLKK  G  L                  P K+ +  +  
Sbjct: 1302 ERAYKLALPSGSKIHNVFHVSLLKKKIGAHLTSSPTLPPLRPDSSVHWTPAKILNRGLFK 1361

Query: 961  KQGQPSQQVLVQWVNFPEEDATWMDISEFQ 1050
            ++ QP  + L+QW   PEEDATW D ++ +
Sbjct: 1362 RRNQPVVRWLIQWSGLPEEDATWEDATDIE 1391



 Score = 91.3 bits (225), Expect(2) = 2e-66
 Identities = 46/88 (52%), Positives = 57/88 (64%)
 Frame = +3

Query: 3    PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
            PLPIP  IW+DI++DF+ GLP       ILVVVD LSKY HF+P+    T+++VAD F  
Sbjct: 1056 PLPIPDSIWQDIAMDFVEGLPSVNGKNAILVVVDRLSKYGHFIPIKHPYTASQVADFFIC 1115

Query: 183  GVVKLHGFPRPMVSYRDKKFSEFFLERF 266
             V KLHG PR +VS RD  F+  F   F
Sbjct: 1116 EVFKLHGMPRTIVSDRDPTFTSQFWTSF 1143


>ref|XP_002437407.1| hypothetical protein SORBIDRAFT_10g026363 [Sorghum bicolor]
            gi|241915630|gb|EER88774.1| hypothetical protein
            SORBIDRAFT_10g026363 [Sorghum bicolor]
          Length = 1609

 Score =  193 bits (491), Expect(2) = 1e-65
 Identities = 109/279 (39%), Positives = 146/279 (52%), Gaps = 3/279 (1%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F  + W+DLFK  G  L MS+A+HPQ DGQ+E++N+T+ MYLR    D P++W  +L WA
Sbjct: 1324 FTGNVWRDLFKQAGVQLRMSTAFHPQTDGQSEAVNKTIAMYLRCITGDRPRDWLDWLPWA 1383

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            EF YNTS+H++   + F+ VYGR                 +D+ L  RD           
Sbjct: 1384 EFCYNTSFHSALRASPFMVVYGRPPPPLLPYGPGTARTEIVDSLLADRDEFLAEVRARLL 1443

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                  +   D   R     V +WV L+L  + Q    G T  KLG KY GPFQILE+IG
Sbjct: 1444 QAQEHARRFYDAKHRPLELAVGDWVLLRLFRHNQSVAPGSTG-KLGPKYAGPFQILERIG 1502

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQL---DPLKVCDYH 951
             VAY+L+LPD  RIH+VFHV +LK  +G              P LP L    PL      
Sbjct: 1503 EVAYRLQLPDGARIHDVFHVGVLKPFRG--------PLPAAAPTLPPLRHGRPLLRPQQV 1554

Query: 952  VILKQGQPSQQVLVQWVNFPEEDATWMDISEFQATYPTF 1068
            +  +  +    VLVQW N P  +ATW  +S+F+A YP+F
Sbjct: 1555 LRSRLSRGEWHVLVQWANLPPSEATWEPVSDFRAAYPSF 1593



 Score = 84.7 bits (208), Expect(2) = 1e-65
 Identities = 40/81 (49%), Positives = 54/81 (66%)
 Frame = +3

Query: 3    PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
            PLP+P ++W DI++DF+  LP     + IL VVD  SKYAHF+PL    T++ VA  FF 
Sbjct: 1245 PLPVPSKVWADIAMDFVEALPKVHGKSVILTVVDRFSKYAHFIPLGHPYTASSVARAFFR 1304

Query: 183  GVVKLHGFPRPMVSYRDKKFS 245
             +V+LHGFP  +VS RD  F+
Sbjct: 1305 DIVRLHGFPDSIVSDRDPVFT 1325


>emb|CAE05274.1| OSJNBb0014D23.8 [Oryza sativa Japonica Group]
          Length = 1545

 Score =  194 bits (493), Expect(2) = 3e-65
 Identities = 114/278 (41%), Positives = 147/278 (52%), Gaps = 4/278 (1%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F S FW+ LF   GT L +++AYHPQ DGQTE +N+ LE+YLR FV   P +WS +L  A
Sbjct: 707  FTSQFWEQLFPRSGTQLQLTTAYHPQTDGQTERVNQCLEIYLRCFVHAMPSKWSSWLYLA 766

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            EFW+NTSYH++   + F  +YG                  L   L +R            
Sbjct: 767  EFWFNTSYHSTLFKSPFEVLYGYPPGHFGIREDSCSI-PDLHAWLSERKLMTQLLKQHLI 825

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                +MK  ADK R  + F V +WV+LKLQPY Q S+    N KL  KYFGPFQIL K+G
Sbjct: 826  RAQQQMKVYADKKRSFREFVVGDWVYLKLQPYIQSSVARRANHKLCFKYFGPFQILHKVG 885

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQLD----PLKVCDY 948
             VAY+L+LP +  +H VFHVS LK A G++            P LP L     P+ V D 
Sbjct: 886  KVAYQLQLPANSAVHPVFHVSQLKHAVGFK--------HQVQPRLPTLSTFQVPVSVLDS 937

Query: 949  HVILKQGQPSQQVLVQWVNFPEEDATWMDISEFQATYP 1062
              I K      QVLV+W +    + TW D+ E Q  +P
Sbjct: 938  RQIRKGNTSLTQVLVRWSDDGYGEETWEDLVELQQRFP 975



 Score = 82.8 bits (203), Expect(2) = 3e-65
 Identities = 39/87 (44%), Positives = 57/87 (65%)
 Frame = +3

Query: 3   PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
           PLP+P   W+ +++DFI GLP S ++  I VVVD  SKY+HF+PL+   ++  VA  F  
Sbjct: 628 PLPVPEGAWQVLTMDFIEGLPKSGKFNSIFVVVDKFSKYSHFIPLSHPFSAIDVAQAFMC 687

Query: 183 GVVKLHGFPRPMVSYRDKKFSEFFLER 263
            + KLHG PR ++S RD+ F+  F E+
Sbjct: 688 NIYKLHGLPRFIISDRDRIFTSQFWEQ 714


>gb|AAP54937.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1477

 Score =  186 bits (473), Expect(2) = 6e-65
 Identities = 99/209 (47%), Positives = 122/209 (58%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F S  W+ LF   GT L+MSS+YHPQ DGQTE +NR LE++LR F+  TP +W+ +L  A
Sbjct: 1220 FTSQLWEHLFTKSGTKLHMSSSYHPQTDGQTERVNRCLEIFLRCFIHVTPTKWANWLYLA 1279

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            EFWYNTSYH+S   T F  +Y R                 LD  L+ RD           
Sbjct: 1280 EFWYNTSYHSSVHKTPFEVIY-RYQPTHFGISMHDCEIPDLDLWLKDRDLINQLIQQHLH 1338

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                +MK  ADK R  + F   +WV+LKLQPY Q S+    N KL  KYFGPFQ+L+++G
Sbjct: 1339 QAEQQMKAYADKNRTFREFQEGDWVYLKLQPYVQSSVARRANHKLSFKYFGPFQVLQRVG 1398

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGY 867
             VAYKL LP S  IH V HVS LK A+GY
Sbjct: 1399 LVAYKLALPPSCHIHLVIHVSQLKVARGY 1427



 Score = 89.4 bits (220), Expect(2) = 6e-65
 Identities = 44/81 (54%), Positives = 55/81 (67%)
 Frame = +3

Query: 3    PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
            PLP+P   W+ IS+DFI GLP S +Y  ILVVVD  SKYAHFLPL    T+  VA +F  
Sbjct: 1141 PLPVPKGAWQVISMDFIEGLPTSDKYNCILVVVDKFSKYAHFLPLTHPFTAFSVATVFMK 1200

Query: 183  GVVKLHGFPRPMVSYRDKKFS 245
             V KLHG P+ ++S RD+ F+
Sbjct: 1201 NVYKLHGMPQVIISDRDRVFT 1221


>gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]
          Length = 2749

 Score =  184 bits (467), Expect(2) = 7e-65
 Identities = 104/277 (37%), Positives = 143/277 (51%), Gaps = 1/277 (0%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F    W+DLFK  G SL MS+A+HPQ DGQ+E +N+ + MYLR    D P+ W  +L WA
Sbjct: 1565 FTGHVWRDLFKCAGVSLRMSTAFHPQTDGQSEVVNKVIAMYLRCVTGDRPRAWVDWLSWA 1624

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            E+ YNTS+HT+   T F  VYGR               AA +  LR RD           
Sbjct: 1625 EYCYNTSFHTALRATPFEVVYGRPPPPILPYQAGSARTAAAEELLRDRDNILAEVRQRLV 1684

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                  K   D G R+      +WV+L+L      S+      KLG +Y GPF++LE+IG
Sbjct: 1685 QAQQLSKRYYDAGHRDMELADGDWVWLRLLHRPVQSLEPRAKGKLGPRYAGPFRVLERIG 1744

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXY-PMLPQLDPLKVCDYHVI 957
             VAY+L+LP+  R+H+VFHV LLK+ +G                +LP   PLKV    + 
Sbjct: 1745 KVAYRLELPEGARLHDVFHVGLLKRHKGEPPEQRAGLPPVQNGRLLPA--PLKV----LR 1798

Query: 958  LKQGQPSQQVLVQWVNFPEEDATWMDISEFQATYPTF 1068
             +Q + +  +LVQW     E+ATW  + +F+  YP F
Sbjct: 1799 AQQRRGTWHILVQWQGLSPEEATWEPLDDFRGLYPDF 1835



 Score = 91.3 bits (225), Expect(2) = 7e-65
 Identities = 45/81 (55%), Positives = 56/81 (69%)
 Frame = +3

Query: 3    PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
            PL +P Q+W DIS+DFI GLP     + IL VVD  SKYAHF+PL    T+A VA  FF+
Sbjct: 1486 PLQVPSQVWADISMDFIEGLPKVGGKSVILTVVDRFSKYAHFIPLGHPYTAASVARAFFD 1545

Query: 183  GVVKLHGFPRPMVSYRDKKFS 245
            G+V+LHGFP  +VS RD  F+
Sbjct: 1546 GIVRLHGFPSSIVSDRDPVFT 1566


>gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1923

 Score =  189 bits (479), Expect(2) = 3e-64
 Identities = 108/276 (39%), Positives = 145/276 (52%)
 Frame = +1

Query: 235  KNFPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLG 414
            K F S  W+ LF   G +L++SSAYHPQ DGQT+ +N+ LEM+LR F    P +W  +L 
Sbjct: 698  KIFTSKLWEFLFLKSGIALHLSSAYHPQSDGQTKRVNQCLEMFLRCFTNAAPFKWVTWLH 757

Query: 415  WAEFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXX 594
             A +WYNT +H++   T F  +YG +                L   L +R          
Sbjct: 758  LAGYWYNTCFHSALNKTPFEVLYGHNPLQLGVTMETCAI-PDLAVWLHERKLMAELLQQH 816

Query: 595  XXXXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEK 774
                  +MK  ADK R  + F V +WVFLKLQPY Q S+      KL  K++GPFQIL +
Sbjct: 817  LHRVQQKMKFHADKNRSFREFAVGDWVFLKLQPYVQKSVASRACHKLAFKFYGPFQILAR 876

Query: 775  IGAVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQLDPLKVCDYHV 954
            +G VAYKL+LPD   IH VFHVS LK A G++             +   + PL++ D  +
Sbjct: 877  VGTVAYKLQLPDDSTIHPVFHVSQLKVAHGFKHQVQSRLPKF---LKSTVYPLQILDQRL 933

Query: 955  ILKQGQPSQQVLVQWVNFPEEDATWMDISEFQATYP 1062
            I K  +   QVLV W +   EDATW D  + Q  +P
Sbjct: 934  IRKGNRTVSQVLVYWSDSVAEDATWEDREDLQQRFP 969



 Score = 84.7 bits (208), Expect(2) = 3e-64
 Identities = 41/81 (50%), Positives = 56/81 (69%)
 Frame = +3

Query: 3   PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
           PLPIP   W+ +SLDFI GLP S++Y  ILVVVD  S+YAHF+PL+   ++  VA  +  
Sbjct: 621 PLPIPEGAWQVVSLDFIEGLPKSERYNCILVVVDKFSRYAHFVPLSHPFSALDVAVSYMK 680

Query: 183 GVVKLHGFPRPMVSYRDKKFS 245
            + KLHG P+ ++S RDK F+
Sbjct: 681 NIYKLHGMPKVLISDRDKIFT 701


>gb|ABF93966.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1920

 Score =  189 bits (479), Expect(2) = 3e-64
 Identities = 108/276 (39%), Positives = 145/276 (52%)
 Frame = +1

Query: 235  KNFPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLG 414
            K F S  W+ LF   G +L++SSAYHPQ DGQT+ +N+ LEM+LR F    P +W  +L 
Sbjct: 698  KIFTSKLWEFLFLKSGIALHLSSAYHPQSDGQTKRVNQCLEMFLRCFTNAAPFKWVTWLH 757

Query: 415  WAEFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXX 594
             A +WYNT +H++   T F  +YG +                L   L +R          
Sbjct: 758  LAGYWYNTCFHSALNKTPFEVLYGHNPLQLGVTMETCAI-PDLAVWLHERKLMAELLQQH 816

Query: 595  XXXXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEK 774
                  +MK  ADK R  + F V +WVFLKLQPY Q S+      KL  K++GPFQIL +
Sbjct: 817  LHRVQQKMKFHADKNRSFREFAVGDWVFLKLQPYVQKSVASRACHKLAFKFYGPFQILAR 876

Query: 775  IGAVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQLDPLKVCDYHV 954
            +G VAYKL+LPD   IH VFHVS LK A G++             +   + PL++ D  +
Sbjct: 877  VGTVAYKLQLPDDSTIHPVFHVSQLKVAHGFKHQVQSRLPKF---LKSTVYPLQILDQRL 933

Query: 955  ILKQGQPSQQVLVQWVNFPEEDATWMDISEFQATYP 1062
            I K  +   QVLV W +   EDATW D  + Q  +P
Sbjct: 934  IRKGNRTVSQVLVYWSDSVAEDATWEDREDLQQRFP 969



 Score = 84.7 bits (208), Expect(2) = 3e-64
 Identities = 41/81 (50%), Positives = 56/81 (69%)
 Frame = +3

Query: 3   PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
           PLPIP   W+ +SLDFI GLP S++Y  ILVVVD  S+YAHF+PL+   ++  VA  +  
Sbjct: 621 PLPIPEGAWQVVSLDFIEGLPKSERYNCILVVVDKFSRYAHFVPLSHPFSALDVAVSYMK 680

Query: 183 GVVKLHGFPRPMVSYRDKKFS 245
            + KLHG P+ ++S RDK F+
Sbjct: 681 NIYKLHGMPKVLISDRDKIFT 701


>gb|ABA95339.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1348

 Score =  180 bits (457), Expect(2) = 1e-63
 Identities = 95/212 (44%), Positives = 121/212 (57%)
 Frame = +1

Query: 235  KNFPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLG 414
            K F S FW+ LF   GT L+MSSAYHPQ DGQTE +N+ +E++LR FV  TP +W+ +L 
Sbjct: 1027 KIFTSQFWEYLFTKSGTELHMSSAYHPQSDGQTERVNQCVELFLRCFVHATPTKWAAWLH 1086

Query: 415  WAEFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXX 594
             AEFWYN +YH++   T F  +YG                  L   LR R          
Sbjct: 1087 LAEFWYNNAYHSAVKQTPFEVIYGHQPAHFGITMEDCAV-PDLQEWLRDRKFMHQLIQQH 1145

Query: 595  XXXXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEK 774
                  +MK  ADK R  + F   +WV+LK+QPY Q S+    N KL  KYFGPF+I  K
Sbjct: 1146 LHRAQQQMKAYADKNRSFREFQPGDWVYLKIQPYVQTSVARRANHKLSFKYFGPFEIQHK 1205

Query: 775  IGAVAYKLKLPDSVRIHNVFHVSLLKKAQGYQ 870
            +G VAYKL LP++  IH V HVS LK A+G+Q
Sbjct: 1206 VGQVAYKLVLPNTCLIHPVVHVSQLKAAKGFQ 1237



 Score = 90.9 bits (224), Expect(2) = 1e-63
 Identities = 45/86 (52%), Positives = 57/86 (66%)
 Frame = +3

Query: 3    PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
            PLP+P   W+ I++DF+ GLP S++Y  ILVVVD  SKYAHF+PL    T+  VA  F  
Sbjct: 950  PLPVPEGAWQTITMDFLEGLPKSERYNCILVVVDKFSKYAHFVPLTHPFTAETVATAFMK 1009

Query: 183  GVVKLHGFPRPMVSYRDKKFSEFFLE 260
             + KLHG PR +VS RDK F+  F E
Sbjct: 1010 NIYKLHGMPRVIVSDRDKIFTSQFWE 1035


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  249 bits (635), Expect = 2e-63
 Identities = 131/277 (47%), Positives = 164/277 (59%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F S+FW+ LFKL GT+L MSSAYHPQ DGQ+E LN+ LEMYLR F  + PK W K L WA
Sbjct: 1214 FTSTFWQHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCLEMYLRCFTYEHPKGWVKALPWA 1273

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            EFWYNT+YH S GMT F A+YGR+              A +   L  RD           
Sbjct: 1274 EFWYNTAYHMSLGMTPFRALYGREPPTLTRQACSIDDPAEVREQLTDRDALLAKLKINLT 1333

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                 MK QADK R + SF + + V +KLQPYRQ S     NQKL  +YFGPF++L KIG
Sbjct: 1334 RAQQVMKRQADKKRLDVSFQIGDEVLVKLQPYRQHSAVLRKNQKLSMRYFGPFKVLAKIG 1393

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQLDPLKVCDYHVIL 960
             VAYKL+LP + RIH VFHVS LK   G               M P + P+K+    +I+
Sbjct: 1394 DVAYKLELPSAARIHPVFHVSQLKPFNGTAQDPYLPLPLTVTEMGPVMQPVKILASRIII 1453

Query: 961  KQGQPSQQVLVQWVNFPEEDATWMDISEFQATYPTFN 1071
            +     +Q+LVQW N  +++ATW DI + +A+YPTFN
Sbjct: 1454 RGHNQIEQILVQWENGLQDEATWEDIEDIKASYPTFN 1490



 Score = 97.4 bits (241), Expect = 8e-18
 Identities = 45/91 (49%), Positives = 64/91 (70%)
 Frame = +3

Query: 3    PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
            PLPIP Q+WED+++DFI GLP S   + I+VV+D L+KYAHF+PL  +  S  VA+ F +
Sbjct: 1135 PLPIPQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFIPLKADYNSKVVAEAFMS 1194

Query: 183  GVVKLHGFPRPMVSYRDKKFSEFFLERFIQV 275
             +VKLHG PR +VS RD+ F+  F +   ++
Sbjct: 1195 HIVKLHGIPRSIVSDRDRVFTSTFWQHLFKL 1225


>ref|XP_002443119.1| hypothetical protein SORBIDRAFT_08g009520 [Sorghum bicolor]
            gi|241943812|gb|EES16957.1| hypothetical protein
            SORBIDRAFT_08g009520 [Sorghum bicolor]
          Length = 1595

 Score =  188 bits (477), Expect(2) = 1e-62
 Identities = 109/286 (38%), Positives = 146/286 (51%), Gaps = 10/286 (3%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F    W+DLFK+ G SL MS+A+HPQ DGQ+E +N+ + MYLR    D P+ W  +L WA
Sbjct: 1297 FTGHVWRDLFKMAGVSLRMSTAFHPQTDGQSEVVNKVIAMYLRCVTGDRPRAWVDWLSWA 1356

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            E+ YNTS+HT+   T F  VYGR                  D  LR RD           
Sbjct: 1357 EYCYNTSFHTALRATPFEVVYGRSPPPMLPYSPGTARTDTADALLRSRDEMLAEVRQRLL 1416

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                  K   D G R+  F V +WV+L+L      S+     +KLG +Y GPFQ+LE+IG
Sbjct: 1417 QAQQLSKKYYDAGHRDVEFQVGDWVWLRLLHRTTQSLDPRAQRKLGPRYAGPFQVLERIG 1476

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQLDPLKVCDYHVI- 957
             VAY+L+LP+S RIH+VFHV LLK  +G              P  P   P  V D  V+ 
Sbjct: 1477 QVAYRLQLPESARIHDVFHVGLLKPHRG------------DPPTAPSTLP-PVADGRVLP 1523

Query: 958  ---------LKQGQPSQQVLVQWVNFPEEDATWMDISEFQATYPTF 1068
                     L++G+   +VL++W     +DATW  + EF+  YP F
Sbjct: 1524 EPETVLRAQLRRGE--WRVLIKWRGLSADDATWELLEEFRQHYPDF 1567



 Score = 79.7 bits (195), Expect(2) = 1e-62
 Identities = 41/74 (55%), Positives = 50/74 (67%)
 Frame = +3

Query: 24   IWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFNGVVKLHG 203
            +W DIS+DFI GLP     + IL VVD  SKYAHF+ L    T+A VA  FF+GVV+LHG
Sbjct: 1225 VWADISIDFIEGLPKVGGKSVILTVVDRFSKYAHFIALGHPYTAASVARAFFDGVVRLHG 1284

Query: 204  FPRPMVSYRDKKFS 245
            FP  +VS RD  F+
Sbjct: 1285 FPSSIVSDRDPVFT 1298


>emb|CAE04934.2| OSJNBa0017P10.11 [Oryza sativa Japonica Group]
          Length = 1012

 Score =  181 bits (459), Expect(2) = 1e-62
 Identities = 107/274 (39%), Positives = 141/274 (51%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F S  W+ LF   GT L+ SSAYHPQ DGQTE +N+ LE YLR FV   P +W  +L  A
Sbjct: 659  FTSQLWEFLFTKSGTKLHKSSAYHPQTDGQTERVNQCLETYLRCFVHAVPSKWFYWLYLA 718

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            EFWYN SYH++   T F  +YG +                L   L  R            
Sbjct: 719  EFWYNCSYHSAIRATPFSVLYGHEPNHFGTSCNDCPV-PKLATWLEDRKVILQLLQQQLH 777

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                +MK  ADK R  + F V ++V+LKLQPY Q S+    N KL +K+FGPF ++ ++G
Sbjct: 778  RAQQQMKLYADKHRSFREFAVGDFVYLKLQPYVQTSVAARANHKLTYKFFGPFPVIARVG 837

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQLDPLKVCDYHVIL 960
             VAY+L+L     IH VFHVS L+KAQG+Q            P L  L   +    H I+
Sbjct: 838  KVAYELQLLAHSSIHPVFHVSQLRKAQGFQ----PDVLSQLPPSLKHLQVPETFLDHRIV 893

Query: 961  KQGQPSQQVLVQWVNFPEEDATWMDISEFQATYP 1062
            ++G  +   L QW      DATW D+ + Q  +P
Sbjct: 894  RKGNTT---LTQWTGCATVDATWEDMEDLQHRFP 924



 Score = 86.7 bits (213), Expect(2) = 1e-62
 Identities = 44/81 (54%), Positives = 54/81 (66%)
 Frame = +3

Query: 3   PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
           PLP+P   W+ +SLDFI GLP S  +  ILVVVD  SKYAHF+PL    T+A VA  F  
Sbjct: 580 PLPVPEGAWQVVSLDFIEGLPKSHGFNCILVVVDKFSKYAHFIPLYHPFTTASVAQEFMT 639

Query: 183 GVVKLHGFPRPMVSYRDKKFS 245
            V KLHG PR ++S RD+ F+
Sbjct: 640 HVYKLHGLPRTIISDRDRIFT 660


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score =  197 bits (500), Expect(2) = 4e-62
 Identities = 112/285 (39%), Positives = 148/285 (51%), Gaps = 8/285 (2%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F S  WKD+F+  G  L+ SSAYHPQ DGQTE +N+ LE YLR      PK+W   L +A
Sbjct: 1034 FTSQTWKDVFEKAGVKLHFSSAYHPQTDGQTERVNQCLENYLRCMTFTKPKKWKSLLAYA 1093

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            ++WYNTS+HT+ GMT + A++G                    N    +            
Sbjct: 1094 KWWYNTSFHTTLGMTPYQALHGVPPPLLAESFLSPSLFTDARNKAEAKSVITAAIKSSLL 1153

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                RMK+ AD  R E+   V + V+LK+QPYR  S+  H++ KL  KY+GPF++LE+IG
Sbjct: 1154 KAQARMKHFADMNRTERVLTVGDMVYLKMQPYRHNSLGLHSSLKLHSKYYGPFRVLERIG 1213

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQLD--------PLK 936
            +VAYKL LP S +IH VFHVS LKK  G ++           P LP  D        P  
Sbjct: 1214 SVAYKLLLPASSQIHPVFHVSQLKKHIGPKVVPE--------PGLPLTDDNGNILSQPTA 1265

Query: 937  VCDYHVILKQGQPSQQVLVQWVNFPEEDATWMDISEFQATYPTFN 1071
            V +  +I +   P  Q  VQW N P   ATW D +     +P FN
Sbjct: 1266 VLERRLIPQNNAPVVQWKVQWANLPLSAATWEDAAFISKVFPAFN 1310



 Score = 69.3 bits (168), Expect(2) = 4e-62
 Identities = 36/81 (44%), Positives = 47/81 (58%)
 Frame = +3

Query: 3    PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
            PLPIP   W  IS+DFI GLP S     I V+VD  +KYAHF+ L+   T+ ++   F  
Sbjct: 955  PLPIPEMAWTHISMDFIEGLPKSDNKDVIWVIVDRFTKYAHFVALSHPFTADQIVTQFVE 1014

Query: 183  GVVKLHGFPRPMVSYRDKKFS 245
               K HG P  +VS RD+ F+
Sbjct: 1015 NYYKHHGLPAVIVSDRDRIFT 1035


>gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score =  196 bits (497), Expect(2) = 7e-62
 Identities = 114/279 (40%), Positives = 150/279 (53%), Gaps = 3/279 (1%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F  + WKD+FKL GT L  S++Y PQ DGQTE LNR LE YLR F    P+ W KYL W 
Sbjct: 918  FLGAVWKDMFKLSGTQLKHSTSYRPQTDGQTEVLNRCLETYLRCFTSSHPRAWHKYLAWV 977

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            EF +NT+YH++   + F  VYGRD             N  L+  L++RD           
Sbjct: 978  EFSFNTAYHSALKTSPFKVVYGRDPPSLVRFELGSTDNWDLEVQLKERDLMLEHIRANLQ 1037

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                 MK  AD  RR+  F V +WV LKLQPYRQ ++      KL  K+FGPF+I+E+IG
Sbjct: 1038 RAQEIMKRNADMKRRDVVFAVGDWVHLKLQPYRQRTVVRRPCYKLAAKFFGPFEIVERIG 1097

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQ---LDPLKVCDYH 951
             VAY++ LP S +IHNVF+VS LKK  G Q            P L +   L P K+ D  
Sbjct: 1098 NVAYRINLPASSKIHNVFNVSQLKKVFGEQQVVQATNP----PKLVEDEFLFPEKIVD-- 1151

Query: 952  VILKQGQPSQQVLVQWVNFPEEDATWMDISEFQATYPTF 1068
             I    + +++ LV+W +    + +WM   EF   +P F
Sbjct: 1152 -ISFTDKGNKEFLVKWQDRGVSENSWMPYKEFVQVFPQF 1189



 Score = 69.7 bits (169), Expect(2) = 7e-62
 Identities = 39/73 (53%), Positives = 49/73 (67%)
 Frame = +3

Query: 24   IWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFNGVVKLHG 203
            +WEDIS+DFI GLP S     ILVVVD LSK  +FL L     +  VA+ F + VVKL+G
Sbjct: 846  VWEDISVDFIEGLPTSGGVNVILVVVDRLSKAVYFLGLKHLFKAIDVANKFVSEVVKLYG 905

Query: 204  FPRPMVSYRDKKF 242
            FP+ +VS RD+ F
Sbjct: 906  FPKSIVSDRDRIF 918


>ref|XP_002443111.1| hypothetical protein SORBIDRAFT_08g008675 [Sorghum bicolor]
            gi|241943804|gb|EES16949.1| hypothetical protein
            SORBIDRAFT_08g008675 [Sorghum bicolor]
          Length = 1456

 Score =  173 bits (439), Expect(2) = 7e-60
 Identities = 98/283 (34%), Positives = 145/283 (51%), Gaps = 7/283 (2%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F S+FW +L +L GT L M++A+HPQ DGQ+E  NR + MYLR    D P++W ++L WA
Sbjct: 1130 FTSAFWCELMRLTGTKLQMTTAFHPQSDGQSEVANRVIIMYLRCLTGDRPRQWLRWLPWA 1189

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            EF +NT+Y +S   T F  VYGRD              AA+   L +R+           
Sbjct: 1190 EFVFNTAYQSSLRDTPFRVVYGRDPPSLRSYEPGETRVAAVAKTLEEREEFLADIRYRLE 1249

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                  K   D G R  ++ V +W  L+L+     S++  T  KL  +++GP+Q++E I 
Sbjct: 1250 QAQAVQKRFYDAGHRPVTYQVGDWALLRLRQLAASSLQQQTKGKLKPRFYGPYQVVELIN 1309

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQL-------DPLKV 939
             VA +L LP + R+H+VFHV LLKK +G              P LPQ+       +P + 
Sbjct: 1310 EVAVRLALPPNARLHDVFHVGLLKKFEG--------PPPTAPPPLPQVHHGAIAPEPERA 1361

Query: 940  CDYHVILKQGQPSQQVLVQWVNFPEEDATWMDISEFQATYPTF 1068
              Y +     +  +QVL++W       +TW D+  F A +PTF
Sbjct: 1362 VRYRL----ARGIRQVLIKWKGESTASSTWEDVDTFLAKHPTF 1400



 Score = 85.5 bits (210), Expect(2) = 7e-60
 Identities = 43/84 (51%), Positives = 54/84 (64%)
 Frame = +3

Query: 3    PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIFFN 182
            PL +P  IW DI+LDF+  LP  +  T IL VVD  SKY HF+PLA   T+  VA+ FF 
Sbjct: 1051 PLSVPQGIWTDIALDFVEALPRVRGKTVILTVVDRFSKYCHFVPLAHPYTAESVAEAFFA 1110

Query: 183  GVVKLHGFPRPMVSYRDKKFSEFF 254
             +V+LHG P+ MVS RD  F+  F
Sbjct: 1111 DIVRLHGVPQSMVSDRDPVFTSAF 1134


>gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1065

 Score =  193 bits (491), Expect(2) = 1e-59
 Identities = 108/278 (38%), Positives = 149/278 (53%), Gaps = 8/278 (2%)
 Frame = +1

Query: 241  FPSSFWKDLFKLHGTSLNMSSAYHPQLDGQTESLNRTLEMYLRSFVMDTPKEWSKYLGWA 420
            F S+ W  LFKL GT L +SS+YHPQ DGQTE +N+ LE +LR FV   P +WS++L  A
Sbjct: 795  FTSTLWATLFKLAGTQLRLSSSYHPQTDGQTERVNQCLETFLRCFVHACPSQWSRWLALA 854

Query: 421  EFWYNTSYHTSAGMTLFLAVYGRDXXXXXXXXXXXXXNAALDNGLRQRDXXXXXXXXXXX 600
            E+WYNTS+H++ G T F  +YG               +  L + L +R+           
Sbjct: 855  EYWYNTSFHSALGTTPFEVLYGHKPRYFGLSANAACQSTELADWLHEREQIQSLIRDHLL 914

Query: 601  XXXXRMKNQADKGRREKSFNVDEWVFLKLQPYRQISMRGHTNQKLGHKYFGPFQILEKIG 780
                RMK QAD+ R E++F V +WV+LKLQP  Q S+    N+KL  +++GPFQ+L ++G
Sbjct: 915  RAQARMKFQADQHRSERTFVVSDWVYLKLQPVVQQSVVTRANRKLAFRFYGPFQVLSRVG 974

Query: 781  AVAYKLKLPDSVRIHNVFHVSLLKKAQGYQLXXXXXXXXXXYPMLPQLD--------PLK 936
             VAYKL LP +  IH V HVS LKKA               Y  LP++         P +
Sbjct: 975  EVAYKLALPATSLIHPVVHVSQLKKA--------LVPSEVVYSQLPRIQSTAGTSVVPSQ 1026

Query: 937  VCDYHVILKQGQPSQQVLVQWVNFPEEDATWMDISEFQ 1050
            V D   I K  +  +Q+LV+W        TW +  E +
Sbjct: 1027 VLDRRFIRKGSKMVEQLLVRWSVDDPHVVTWENAQELR 1064



 Score = 64.3 bits (155), Expect(2) = 1e-59
 Identities = 31/58 (53%), Positives = 40/58 (68%)
 Frame = +3

Query: 3   PLPIPVQIWEDISLDFIIGLPMSKQYTEILVVVDCLSKYAHFLPLAPNATSAKVADIF 176
           PLP+P   W+ +SLDFI GLP S  +  ILVVVD  SKY+HF+PLA   T+  VA+ +
Sbjct: 734 PLPVPDHAWQVVSLDFIEGLPKSATFNCILVVVDKFSKYSHFVPLAHPFTAMDVAEAY 791