BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00026513
         (1185 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A...    96   3e-17
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    96   4e-17
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...    95   6e-17
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    94   8e-17
ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608...    91   9e-16
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622...    90   2e-15
gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [...    90   2e-15
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    90   2e-15
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    90   2e-15
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    89   5e-15
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...    87   1e-14
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...    87   1e-14
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...    87   1e-14
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    87   2e-14
ref|XP_006470123.1| PREDICTED: uncharacterized protein LOC102629...    86   3e-14
ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ...    86   3e-14
gb|EMJ08288.1| hypothetical protein PRUPE_ppa023640mg, partial [...    85   7e-14
gb|EMJ12186.1| hypothetical protein PRUPE_ppa021345mg [Prunus pe...    84   9e-14
ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A...    84   1e-13
gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [...    84   1e-13

>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 765

 Score = 95.9 bits (237), Expect = 3e-17
 Identities = 79/325 (24%), Positives = 145/325 (44%), Gaps = 8/325 (2%)
 Frame = -1

Query: 1131 KDRLVWHFEPKGHFTTRSCYMAALKKSRISSFSPECSKMRENEANMWXXXXXXXXXXXXK 952
            +D ++WHF+ KG ++ +S Y  AL ++  +   PE S    + + +W            K
Sbjct: 405  EDEVLWHFDKKGEYSVKSGYQLALNQNFPNE--PESSN---SSSRLWKIPWMLDLPEKVK 459

Query: 951  HFIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPV--- 781
             F+WR L NIL T E + K+    +P+CQ C    E + HVL  C  A+ +W LAP+   
Sbjct: 460  IFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQ 519

Query: 780  -SWANNCDPSISFSQWWSQICRIKAAYIEDRIQLSTYILWWLWKARNLWMFQNIQTSEKE 604
             S  +N D   +  + WS+    +A       +L     W +W ARN ++F+  ++  + 
Sbjct: 520  PSKDHNQDFFSAIQEMWSRSSTAEA-------ELMIVYCWVIWSARNKFIFEGKKSDSRF 572

Query: 603  IVELAYSEWMEFKSIAHHTESLDTPHKHHTLEMDIVQPEGCKVGHFSL--YVSTLLQENG 430
            +   A S    ++ ++          K   ++    +P    V   ++   VST  Q+ G
Sbjct: 573  LAAKADSVLKAYQRVSKPGNVHGA--KDRGIDQQKWKPPSQNVLKLNVDAAVSTKXQKVG 630

Query: 429  QYHIKCIARNYQDIIIATW--NSWLEQSVSNTECLLWAVRWSMVNAHKESWAKIIIQIEA 256
               +  I R+ +  I+A     +   + VS  E    A+ W +  A++ S + +I++ + 
Sbjct: 631  ---LGAIVRDAEGKILAVGIKQAQFRERVSLAEA--EAIHWGLQVANQISSSSLIVESDC 685

Query: 255  KDIARKLQNNQQFEVSSATISEDIQ 181
            K++   L N +        I  D++
Sbjct: 686  KEVVELLNNTKGSRTEIHWILSDVR 710


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 95.5 bits (236), Expect = 4e-17
 Identities = 75/333 (22%), Positives = 137/333 (41%), Gaps = 15/333 (4%)
 Frame = -1

Query: 1128 DRLVWHFEPKGHFTTRSCYMAALKKSRISSFSPECSKMRENEANMWXXXXXXXXXXXXKH 949
            D+ +W     G FT RS Y   L + R +  S      R     +W            K 
Sbjct: 1010 DQWMWMMSKNGQFTVRSAYYHELLEDRKTGPSTS----RGPNLKLWQKIWKAKIPPKVKL 1065

Query: 948  FIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVS--- 778
            F W+ +HN LA    + K+GM  D  C  CGE  E  EH+++ C  +   W ++P+    
Sbjct: 1066 FSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHT 1125

Query: 777  ----------WANNCDPSISFSQWWSQICRIKAAYIEDRIQLSTYILWWLWKARNLWMFQ 628
                      W  +   +   ++WW+               L   I W +W  RN W+F+
Sbjct: 1126 GNIEAGSFRIWVESLLDTHKDTEWWA---------------LFWMICWNIWLGRNKWVFE 1170

Query: 627  NIQTSEKEIVELAYSEWMEFKSIAHHTESLDTPHKHHTLEMDIVQPEGCKVGHFSLYVST 448
              + + +E+VE A    MEF+    HT  ++T + H       V P    VG   L V  
Sbjct: 1171 KKKLAFQEVVERAVRGVMEFEEECAHTSPVETLNTHENGWS--VPP----VGMVKLNVDA 1224

Query: 447  LLQENGQYHIKCIARNYQ-DIIIAT-WNSWLEQSVSNTECLLWAVRWSMVNAHKESWAKI 274
             + ++    +  + R+ + D+++AT    W  +  +  E    ++R+ +  A++  +  +
Sbjct: 1225 AVFKHVGIGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEAC--SLRYGLKVAYEAGFRNL 1282

Query: 273  IIQIEAKDIARKLQNNQQFEVSSATISEDIQLL 175
            +++++ K +  +L+           + +DI  L
Sbjct: 1283 VVEMDCKKLFLQLRGKASDVTPFGRVVDDILYL 1315


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score = 94.7 bits (234), Expect = 6e-17
 Identities = 79/325 (24%), Positives = 145/325 (44%), Gaps = 8/325 (2%)
 Frame = -1

Query: 1131 KDRLVWHFEPKGHFTTRSCYMAALKKSRISSFSPECSKMRENEANMWXXXXXXXXXXXXK 952
            +D ++WHF+ KG ++ +S Y  AL ++  +   PE S    + + +W            K
Sbjct: 1092 EDEVLWHFDKKGEYSVKSGYQLALNQNFPNE--PESSN---SSSRLWKIPWMLDLPEKVK 1146

Query: 951  HFIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPV--- 781
             F+WR L NIL T E + K+    +P+CQ C    E + HVL  C  A+ +W LAP+   
Sbjct: 1147 IFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQ 1206

Query: 780  -SWANNCDPSISFSQWWSQICRIKAAYIEDRIQLSTYILWWLWKARNLWMFQNIQTSEKE 604
             S  +N D   +  + WS+    +A       +L     W +W ARN ++F+  ++  + 
Sbjct: 1207 PSKDHNQDFFSAIQEMWSRSSTAEA-------ELMIVYCWVIWSARNKFIFEGKKSDSRF 1259

Query: 603  IVELAYSEWMEFKSIAHHTESLDTPHKHHTLEMDIVQPEGCKVGHFSL--YVSTLLQENG 430
            +   A S    ++ ++          K   ++    +P    V   ++   VST  Q+ G
Sbjct: 1260 LAAKADSVLKAYQRVSKPGNVHGA--KDRGIDQQKWKPPSQNVLKLNVDAAVSTKDQKVG 1317

Query: 429  QYHIKCIARNYQDIIIATW--NSWLEQSVSNTECLLWAVRWSMVNAHKESWAKIIIQIEA 256
               +  I R+ +  I+A     +   + VS  E    A+ W +  A++ S + +I++ + 
Sbjct: 1318 ---LGAIVRDAEGKILAVGIKQAQFRERVSLAEA--EAIHWGLQVANQISSSSLIVESDC 1372

Query: 255  KDIARKLQNNQQFEVSSATISEDIQ 181
            K++   L N +        I  D++
Sbjct: 1373 KEVVELLNNTKGSRTEIHWILSDVR 1397


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 94.4 bits (233), Expect = 8e-17
 Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 6/201 (2%)
 Frame = -1

Query: 1128 DRLVWHFEPKGHFTTRSCYMAALKKSRISSFSP-ECSKMRENEANMWXXXXXXXXXXXXK 952
            D   W F   G++T +S Y AA   SR +   P +   +   +A +W             
Sbjct: 881  DDFSWSFTKSGNYTVKSGYWAARDLSRPTCDLPFQGPSVSALQAQVWKIKTTRKFK---- 936

Query: 951  HFIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVSWA 772
            HF W+CL   LAT +++  + +  + +C  CG   E++ H+LF CP ++ +W L+P+  +
Sbjct: 937  HFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPIPSS 996

Query: 771  NNCDPSIS-FSQWWSQICRIKAAYI-EDRIQLSTYILWWLWKARNLWMFQNIQTSEKEIV 598
                P  S F  +   + R K   I ED +++  +ILW++WK+RN ++F+N+  S + I+
Sbjct: 997  EYIFPRNSLFYNFDFLLSRGKEFDIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVIL 1056

Query: 597  ELAYSE---WMEFKSIAHHTE 544
            + A  E   W +  S    TE
Sbjct: 1057 DFAIQEANVWKQANSKEVATE 1077


>ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608298 [Citrus sinensis]
          Length = 1570

 Score = 90.9 bits (224), Expect = 9e-16
 Identities = 74/332 (22%), Positives = 139/332 (41%), Gaps = 5/332 (1%)
 Frame = -1

Query: 1131 KDRLVWHFEPKGHFTTRSCYMAALKKSRISSFSPECSKMRENEANMWXXXXXXXXXXXXK 952
            KD ++WH++ K  ++ +S Y  AL     +   P  S   EN+   W            +
Sbjct: 912  KDEVIWHYDRKCQYSVKSGYQIALNLKFPAK--PTSSATSENQ---WNAIWLLTLPEKIR 966

Query: 951  HFIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVSWA 772
             F WR   N+L + E + K+ +  +P+CQ C +  E + H L  C   + +WK+    + 
Sbjct: 967  IFAWRAAKNLLPSAENLWKRKVIQEPLCQFCNKKLETIFHALVGCKVVKKIWKI--TRFE 1024

Query: 771  NNCDPSISFSQWWSQICRIKAAYIEDRIQLSTYILWWLWKARNLWMFQNIQTSEKEIVEL 592
            ++   S+      S +  +K    +D I+L   ILW +W A+N W+F+ ++ S    V  
Sbjct: 1025 DDLKDSVE-QDMLSLLIELKLRRSKDDIELLVTILWMIWNAQNSWIFKGVKDSPHVTVSK 1083

Query: 591  AYSEWMEFKSIAHHTESLDTPHKHHTLEMDIVQPEGCKVGHFSLYVSTLLQENGQYH--- 421
            A +    F+     T+     H        +   +  + GHF + V        Q     
Sbjct: 1084 AEAVLEAFR----RTQLPAATHIDIQSSSKLKAWKPPQRGHFKVNVDAATNSEKQIASLG 1139

Query: 420  --IKCIARNYQDIIIATWNSWLEQSVSNTECLLWAVRWSMVNAHKESWAKIIIQIEAKDI 247
              I+  A N     +     + +  ++  E + W +R +  NA  ES   +I++ +A+++
Sbjct: 1140 AVIRDEAGNVIAAAVKVSKFYGDVFIAEAEAIEWGLRLA-GNACTES---LIVESDAQEV 1195

Query: 246  ARKLQNNQQFEVSSATISEDIQLLKHLFDYCC 151
             + + N+Q        I  ++Q +   F   C
Sbjct: 1196 VKLVNNSQGCRSEIFWIISEVQRVLKSFSSVC 1227


>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
          Length = 1160

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 75/330 (22%), Positives = 132/330 (40%), Gaps = 5/330 (1%)
 Frame = -1

Query: 1131 KDRLVWHFEPKGHFTTRSCYMAALKKSRISSFSPECSKMRENEANMWXXXXXXXXXXXXK 952
            +D L+WHF   G +T +S Y  ALK        P      E+  N W            +
Sbjct: 768  EDELIWHFGKSGQYTVKSGYQRALKIR-----FPAMPSSSESSKNEWNIIWSLALPKKIR 822

Query: 951  HFIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVSWA 772
             F+WR   N+L + E + K+ +  +P CQ+C    EN+ H L  C  A+ VW+L+     
Sbjct: 823  IFVWRAAKNLLPSAENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLSLFYID 882

Query: 771  NNCDPSISFSQWWSQICRIKAAYIEDRIQLSTYILWWLWKARNLWMFQNIQTSEKEIVEL 592
                P          + R+++      + L   +LW  W ARN W+F+  + + + +V  
Sbjct: 883  IQAAPGQDILSLLHGVKRMRS---NADVDLFAVMLWAKWNARNQWLFKGKRENPQSVVAK 939

Query: 591  AYSEWMEFKSIAHHTESLDTPHKHHTLEMDIVQPEGCKVGHFSLYVSTLLQENGQYHIKC 412
            A +    +K +     S D  H     +  + Q          + ++T    N + ++  
Sbjct: 940  AEAVMEAYKRV---QPSADVSHGK---QQKVAQLGWNPPQEGFVKINTDAATNSEKNLAG 993

Query: 411  IA-----RNYQDIIIATWNSWLEQSVSNTECLLWAVRWSMVNAHKESWAKIIIQIEAKDI 247
            +       N Q    A   S    SV+  E    A+ W +  A       +I++ +++++
Sbjct: 994  LGAVIRDENGQVTATAIKVSKFHGSVAYAEA--EAMEWGLQVAKDAHVKDVIMESDSQEV 1051

Query: 246  ARKLQNNQQFEVSSATISEDIQLLKHLFDY 157
               + N Q        +  +IQ LK  FD+
Sbjct: 1052 VSLVNNRQGSRSEIYWVVLEIQKLKESFDH 1081


>gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
          Length = 920

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
 Frame = -1

Query: 1131 KDRLVWHFEPKGHFTTRSCY-MAALKKSRISSFSPECSKMRENEANMWXXXXXXXXXXXX 955
            +DR+VW +   G ++ +S Y +  +  S I  ++     +   E  +W            
Sbjct: 560  EDRIVWPWNKSGLYSVKSGYNLQVVSASYIGGYNRSSHVI---ERGVWKDIWASPTLPKV 616

Query: 954  KHFIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVSW 775
            K F+WR +   L TK  + ++ + + P C IC +  E+ EH +F CP  Q VW  +P+++
Sbjct: 617  KFFLWRMMVRALPTKLNLYRRRIISSPFCPICNQYEESEEHAIFLCPWTQAVWFGSPLNY 676

Query: 774  ANNCDPSISFSQWWSQICRIKAAYIEDRI---QLSTYILWWLWKARNLWMFQNIQTSEKE 604
              N     +F +W++ +   +     +R+    L ++I W +WKAR  ++F++I    + 
Sbjct: 677  RVNPQSITTFDRWFTGLLNSQMFSKSERVWVLSLVSFISWEIWKARCKFLFEDITIDPRC 736

Query: 603  IVELAYSEWMEFKSIAHH 550
            +VE A S   EF  +  H
Sbjct: 737  VVERAASAAEEFDVLRRH 754


>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
            gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
            reverse transcriptase [Arabidopsis thaliana]
            gi|332641254|gb|AEE74775.1| RNase H domain-containing
            protein [Arabidopsis thaliana]
          Length = 484

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 81/336 (24%), Positives = 138/336 (41%), Gaps = 14/336 (4%)
 Frame = -1

Query: 1128 DRLVWHFEPKGHFTTRSCYMAALK--KSRISSFSPECSKMRENEANMWXXXXXXXXXXXX 955
            D+++W++   G +T RS Y        + I + +P    + + +  +W            
Sbjct: 117  DKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSI-DLKTRIWNLPIMPKLK--- 172

Query: 954  KHFIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVSW 775
             HF+WR L   LAT E++  +GM+ DP C  C    E++ H LF CP A + W+L+  S 
Sbjct: 173  -HFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSL 231

Query: 774  ANNCDPSISFSQWWSQICRIKAAYIEDRIQ------LSTYILWWLWKARNLWMFQNIQTS 613
              N   S  F +  S I      +++D         L  +++W +WKARN  +F   + S
Sbjct: 232  IRNQLMSNDFEENISNILN----FVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRES 287

Query: 612  EKEIVELAYSE---WMEFKSIAHHTESLDTPHKHHTLEMDIVQPEGCKVGHFSLYVSTLL 442
              + V  A +E   W+        T S       + +E         K    + +    L
Sbjct: 288  PSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKL 347

Query: 441  QENGQYHIKCIARNYQDIIIATWNSWLEQSVSNTECLLWAVRWSMVNAHKESWAKIIIQI 262
            +  G +    I RN+    I    SW    +++T   L A   +++ A +++W +   Q+
Sbjct: 348  EATGGW----IIRNHYGTPI----SWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQV 399

Query: 261  EAKDIAR---KLQNNQQFEVSSATISEDIQLLKHLF 163
              +   +    L N   F  S A   EDI    + F
Sbjct: 400  FMEGDCQTLINLINGISFHSSLANHLEDISFWANKF 435


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 81/336 (24%), Positives = 138/336 (41%), Gaps = 14/336 (4%)
 Frame = -1

Query: 1128 DRLVWHFEPKGHFTTRSCYMAALK--KSRISSFSPECSKMRENEANMWXXXXXXXXXXXX 955
            D+++W++   G +T RS Y        + I + +P    + + +  +W            
Sbjct: 1383 DKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSI-DLKTRIWNLPIMPKLK--- 1438

Query: 954  KHFIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVSW 775
             HF+WR L   LAT E++  +GM+ DP C  C    E++ H LF CP A + W+L+  S 
Sbjct: 1439 -HFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSL 1497

Query: 774  ANNCDPSISFSQWWSQICRIKAAYIEDRIQ------LSTYILWWLWKARNLWMFQNIQTS 613
              N   S  F +  S I      +++D         L  +++W +WKARN  +F   + S
Sbjct: 1498 IRNQLMSNDFEENISNILN----FVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRES 1553

Query: 612  EKEIVELAYSE---WMEFKSIAHHTESLDTPHKHHTLEMDIVQPEGCKVGHFSLYVSTLL 442
              + V  A +E   W+        T S       + +E         K    + +    L
Sbjct: 1554 PSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKL 1613

Query: 441  QENGQYHIKCIARNYQDIIIATWNSWLEQSVSNTECLLWAVRWSMVNAHKESWAKIIIQI 262
            +  G +    I RN+    I    SW    +++T   L A   +++ A +++W +   Q+
Sbjct: 1614 EATGGW----IIRNHYGTPI----SWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQV 1665

Query: 261  EAKDIAR---KLQNNQQFEVSSATISEDIQLLKHLF 163
              +   +    L N   F  S A   EDI    + F
Sbjct: 1666 FMEGDCQTLINLINGISFHSSLANHLEDISFWANKF 1701


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score = 88.6 bits (218), Expect = 5e-15
 Identities = 81/336 (24%), Positives = 138/336 (41%), Gaps = 14/336 (4%)
 Frame = -1

Query: 1128 DRLVWHFEPKGHFTTRSCYMAALK--KSRISSFSPECSKMRENEANMWXXXXXXXXXXXX 955
            D+++W++   G +T RS Y        + I + +P    + + +  +W            
Sbjct: 1157 DKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSI-DLKTRIWNLPIMPKLK--- 1212

Query: 954  KHFIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVSW 775
             HF+WR L   LAT E++  +GM+ DP+C  C    E++ H LF CP A + W L+  S 
Sbjct: 1213 -HFLWRALSQALATTERLTTRGMRIDPICPRCHRENESINHALFTCPFATMAWWLSDSSL 1271

Query: 774  ANNCDPSISFSQWWSQICRIKAAYIEDRIQ------LSTYILWWLWKARNLWMFQNIQTS 613
              N   S  F +  S I      +++D         L  +++W +WKARN  +F   + S
Sbjct: 1272 IRNQLMSNDFEENISNILN----FVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRES 1327

Query: 612  EKEIVELAYSE---WMEFKSIAHHTESLDTPHKHHTLEMDIVQPEGCKVGHFSLYVSTLL 442
              + V  A +E   W+        T S       + +E         K    + +    L
Sbjct: 1328 PSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKL 1387

Query: 441  QENGQYHIKCIARNYQDIIIATWNSWLEQSVSNTECLLWAVRWSMVNAHKESWAKIIIQI 262
            +  G +    I RN+    I    SW    +++T   L A   +++ A +++W +   Q+
Sbjct: 1388 EATGGW----IIRNHYGTPI----SWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQV 1439

Query: 261  EAKDIAR---KLQNNQQFEVSSATISEDIQLLKHLF 163
              +   +    L N   F  S A   EDI    + F
Sbjct: 1440 FMEGDCQTLINLINGISFHSSLANHLEDISFWANKF 1475


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
            [Citrus sinensis]
          Length = 765

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 76/336 (22%), Positives = 149/336 (44%), Gaps = 15/336 (4%)
 Frame = -1

Query: 1128 DRLVWHFEPKGHFTTRSCYMAALKKSRISSFSPECSKMRENEANMWXXXXXXXXXXXXKH 949
            D+++WH++ KG+++ +S Y  AL+        P      + + N W            K 
Sbjct: 410  DQVLWHYDKKGNYSVKSGYQLALQMK-----FPNRPSSSKEDNNSWNSIWYLQIPEKVKI 464

Query: 948  FIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVS--- 778
            F+WR  +++L T E + K+ +   P CQ C  + E + H LF C  ++ +WKL       
Sbjct: 465  FMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEV 524

Query: 777  WANNCDPSISFSQWWSQICRIKAAYIEDRIQLSTYILWWLWKARNLWMFQNIQTSEKEIV 598
             A  C   +S       +  +     +  ++L   + W +W +RNL++FQN    +KE  
Sbjct: 525  KALKCKDVLSL------LLALADRRSKTEMELIVAVCWSIWHSRNLFIFQN----KKEDF 574

Query: 597  ELAYSEWMEFKSIAHHTESLDTPHKHHTLEMDIVQPEGCK---VGHFSLYVSTLLQ-ENG 430
            +L+ +     ++I    + +  P      + D+V  +  K    G F + V   ++ EN 
Sbjct: 575  QLSVA---GAEAIVQSYKRIQMPQLQAFSDQDLVSHKHWKCPPAGWFKVNVDAAIKLENQ 631

Query: 429  QYHIKCIARNYQDIIIATW---NSWLEQSVSNTECLLWAVRWSMVNAHKESWAKIIIQIE 259
            +  +  + RN +   I      + W+++ V   E    A R+ +  A       +I++ +
Sbjct: 632  RVGLGIVIRNSEGKFITAAIKPSKWIDR-VDYAEA--EATRFGLEVAESAGCLPLIVETD 688

Query: 258  AKDI-----ARKLQNNQQFEVSSATISEDIQLLKHL 166
            +K++     ARK    + F + S  + + ++ LKH+
Sbjct: 689  SKEVTDLVSARKSTKAEIFWIVS-EVQDTMKRLKHV 723


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 76/336 (22%), Positives = 149/336 (44%), Gaps = 15/336 (4%)
 Frame = -1

Query: 1128 DRLVWHFEPKGHFTTRSCYMAALKKSRISSFSPECSKMRENEANMWXXXXXXXXXXXXKH 949
            D+++WH++ KG+++ +S Y  AL+        P      + + N W            K 
Sbjct: 613  DQVLWHYDKKGNYSVKSGYQLALQMK-----FPNRPSSSKEDNNSWNSIWYLQIPEKVKI 667

Query: 948  FIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVS--- 778
            F+WR  +++L T E + K+ +   P CQ C  + E + H LF C  ++ +WKL       
Sbjct: 668  FMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEV 727

Query: 777  WANNCDPSISFSQWWSQICRIKAAYIEDRIQLSTYILWWLWKARNLWMFQNIQTSEKEIV 598
             A  C   +S       +  +     +  ++L   + W +W +RNL++FQN    +KE  
Sbjct: 728  KALKCKDVLSL------LLALADRRSKTEMELIVAVCWSIWHSRNLFIFQN----KKEDF 777

Query: 597  ELAYSEWMEFKSIAHHTESLDTPHKHHTLEMDIVQPEGCK---VGHFSLYVSTLLQ-ENG 430
            +L+ +     ++I    + +  P      + D+V  +  K    G F + V   ++ EN 
Sbjct: 778  QLSVA---GAEAIVQSYKRIQMPQLQAFSDQDLVSHKHWKCPPAGWFKVNVDAAIKLENQ 834

Query: 429  QYHIKCIARNYQDIIIATW---NSWLEQSVSNTECLLWAVRWSMVNAHKESWAKIIIQIE 259
            +  +  + RN +   I      + W+++ V   E    A R+ +  A       +I++ +
Sbjct: 835  RVGLGIVIRNSEGKFITAAIKPSKWIDR-VDYAEA--EATRFGLEVAESAGCLPLIVETD 891

Query: 258  AKDI-----ARKLQNNQQFEVSSATISEDIQLLKHL 166
            +K++     ARK    + F + S  + + ++ LKH+
Sbjct: 892  SKEVTDLVSARKSTKAEIFWIVS-EVQDTMKRLKHV 926


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 769

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 77/336 (22%), Positives = 148/336 (44%), Gaps = 15/336 (4%)
 Frame = -1

Query: 1128 DRLVWHFEPKGHFTTRSCYMAALKKSRISSFSPECSKMRENEANMWXXXXXXXXXXXXKH 949
            D+++WH++ KG+++ +S Y  AL+        P      + + N W            K 
Sbjct: 410  DQVLWHYDKKGNYSVKSGYQLALQMK-----FPNRPSSSKEDNNSWNSIWYLQIPEKVKI 464

Query: 948  FIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVS--- 778
            F+WR  +++L T E + K+ +   P CQ C  + E + H LF C  ++ +WKL       
Sbjct: 465  FMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEV 524

Query: 777  WANNCDPSISFSQWWSQICRIKAAYIEDRIQLSTYILWWLWKARNLWMFQNIQTSEKEIV 598
             A  C   +S       +  +     +  ++L   + W +W +RNL++FQN    +KE  
Sbjct: 525  KALKCKDVLSL------LLALADRRSKTEMELIVAVCWSIWHSRNLFIFQN----KKEDF 574

Query: 597  ELAYSEWMEFKSIAHHTESLDTPHKHHTLEMDIVQPEGCK---VGHFSLYVSTLLQ-ENG 430
            +L+ +     ++I    + +  P        D+V  +  K    G F + V   ++ EN 
Sbjct: 575  QLSVA---GAEAIVQSYKRIQMPQLQAFSNQDLVSHKHWKCPPAGWFKVNVDAAIKLENQ 631

Query: 429  QYHIKCIARNYQDIIIATW---NSWLEQSVSNTECLLWAVRWSMVNAHKESWAKIIIQIE 259
            +  +  + RN +   I      + WL++ V   E    A R+ +  A       +I++ +
Sbjct: 632  RVGLGIVIRNSEGKFITAAIKPSKWLDR-VDYAEA--EATRFGLEVAESAGCLPLIVETD 688

Query: 258  AKDI-----ARKLQNNQQFEVSSATISEDIQLLKHL 166
            +K++     ARK    + F + S  + + ++ LKH+
Sbjct: 689  SKEVTDLVSARKSTKAEIFWIVS-EVQDTMKRLKHV 723


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 8/221 (3%)
 Frame = -1

Query: 1140 PGCKDRLVWHFEPKGHFTTRSCYMAALK--KSRISSFSPECSKMRENEANMWXXXXXXXX 967
            P  +D L WHF   G++T +S Y  A        +   P+ + ++   A +W        
Sbjct: 781  PNMEDTLGWHFTKAGNYTVKSGYHTARLDLNEGTTLIGPDLTTLK---AYIWKVQCPPKL 837

Query: 966  XXXXKHFIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLA 787
                 HF+W+ L   +   E + K+G+  D  C  CG + E++ H LF C  A+ +W L+
Sbjct: 838  R----HFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQIWALS 893

Query: 786  PVSWANNCDPSIS-FSQWWSQICRIKAAYIEDRIQLSTY--ILWWLWKARNLWMFQNIQT 616
             +  A    PS S F+       RI +      +  + Y  I+W++WKARN  +F+N+  
Sbjct: 894  QIPTAPGIFPSNSIFTNLDHLFWRIPSG-----VDSAPYPWIIWYIWKARNEKVFENVDK 948

Query: 615  SEKEIVELAYSE---WMEFKSIAHHTESLDTPHKHHTLEMD 502
               EI+ LA  E   W E   +  H+E      +H +L +D
Sbjct: 949  DPMEILLLAVKEAQSWQE-AQVELHSE------RHGSLSID 982


>ref|XP_006470123.1| PREDICTED: uncharacterized protein LOC102629438 [Citrus sinensis]
          Length = 715

 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 75/325 (23%), Positives = 129/325 (39%)
 Frame = -1

Query: 1131 KDRLVWHFEPKGHFTTRSCYMAALKKSRISSFSPECSKMRENEANMWXXXXXXXXXXXXK 952
            +D L+WHF   G +T +S Y  AL   R  +  P  S+  +NE   W            +
Sbjct: 379  EDELIWHFGKSGQYTVKSGYQTALN-IRFPAM-PSSSEFSKNE---WNIIWSLALPKKIR 433

Query: 951  HFIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVSWA 772
             F+WR   N+L + E + K+ +  +P CQ+C    EN+ H L  C  A+ VW+L   S  
Sbjct: 434  IFVWRAAKNLLPSDENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRL---SLF 490

Query: 771  NNCDPSISFSQWWSQICRIKAAYIEDRIQLSTYILWWLWKARNLWMFQNIQTSEKEIVEL 592
            +N   +       S +  +K       + L   +LW  W ARN W+F+  + + + +V  
Sbjct: 491  DNDIQAAPGQDILSLLHGVKRMRSNADVDLFAAMLWAKWNARNQWLFKGKRENPQSVVAK 550

Query: 591  AYSEWMEFKSIAHHTESLDTPHKHHTLEMDIVQPEGCKVGHFSLYVSTLLQENGQYHIKC 412
            A +    +K +    +          +  D        +       + +  ENGQ     
Sbjct: 551  AEAVMEAYKRVQPSAD----------INTDAATNSEKNLAGLG---AVIRDENGQVTATA 597

Query: 411  IARNYQDIIIATWNSWLEQSVSNTECLLWAVRWSMVNAHKESWAKIIIQIEAKDIARKLQ 232
            I             S    SV+  E    A+ W +  A       +I++ +++++   + 
Sbjct: 598  IK-----------VSKFHGSVAYAEA--EAMEWGLQVAKDAHVKDVIMESDSQEVVSLVN 644

Query: 231  NNQQFEVSSATISEDIQLLKHLFDY 157
            N Q        +  +IQ LK  FD+
Sbjct: 645  NRQGSRSEIYWVVLEIQKLKESFDH 669


>ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|3184275|gb|AAC18922.1| putative reverse transcriptase
           [Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase
           H domain-containing protein [Arabidopsis thaliana]
          Length = 365

 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 13/279 (4%)
 Frame = -1

Query: 951 HFIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVSWA 772
           HF+WRC+   LAT  ++  + + ADP+CQ C    E + H++F+CP  Q VW+ A +   
Sbjct: 48  HFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQSVWRSANIIIG 107

Query: 771 NNCDPSISFSQWWSQICRIKAAYIEDRIQ--LSTYILWWLWKARNLWMF-QNIQTSEKEI 601
           N   P  SF    +++ ++      + +   L  +I+W LWK+RN+++F Q  Q+ + E 
Sbjct: 108 NQWGPPSSFEDNLNRLIQLSKTQTTNSLDRFLPFWIMWRLWKSRNVFLFQQKCQSPDYEA 167

Query: 600 VE--LAYSEWMEFKSIAHHTESLDTPHKHHTLEMDIVQ----PEGCKVGHFSLYVSTLLQ 439
            +     +EW+       +T      +   T   D  Q    PEG    +F    S   Q
Sbjct: 168 RKGIQDATEWLNANETTENTNVHVATNPIQTSRRDSSQWNPPPEGWVKCNFD---SGYTQ 224

Query: 438 ENGQYHIKCIARNYQDIIIATWNSWLEQSVSNTECLLWAVRWSMVNAHKESWAK----II 271
            +         R     I+   N+ L+ S     C L A     ++A +  WA     + 
Sbjct: 225 GSPYTRSGWTIRECNGHIVLCGNAKLQSST----CSLHAEALGFLHALQVIWAHGLRYVW 280

Query: 270 IQIEAKDIARKLQNNQQFEVSSATISEDIQLLKHLFDYC 154
            + ++K +   + N +   +   T+  DI+       YC
Sbjct: 281 FESDSKSLVTLINNGEDHSL-LGTLIYDIRHWMLKLPYC 318


>gb|EMJ08288.1| hypothetical protein PRUPE_ppa023640mg, partial [Prunus persica]
          Length = 294

 Score = 84.7 bits (208), Expect = 7e-14
 Identities = 62/209 (29%), Positives = 89/209 (42%), Gaps = 4/209 (1%)
 Frame = -1

Query: 1128 DRLVWHFEPKGHFTTRSCYMAALKKSRISSFSPECSKMRENEA---NMWXXXXXXXXXXX 958
            D L+WHFE  G +T RS Y  A ++  +     + +  R        +W           
Sbjct: 93   DTLIWHFERDGQYTVRSGYEVA-RRVLLQQDGDDTNMNRGPIVACEQVWKKIWKARVPPK 151

Query: 957  XKHFIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVS 778
               FIWR L NIL TK+ ++ + +     C  CG   E + HVL  CP A   W L P +
Sbjct: 152  VCIFIWRALLNILPTKDNLIHRSISELGGCVFCGAE-ETVAHVLLRCPMAIASWSLFP-A 209

Query: 777  WAN-NCDPSISFSQWWSQICRIKAAYIEDRIQLSTYILWWLWKARNLWMFQNIQTSEKEI 601
            WA+ N D +  F  W+         ++ +R+ +    LW  W  RN  ++   Q S  EI
Sbjct: 210  WAHFNTDATEEFKMWFQGFAADHPLHVLERVMV---CLWMPWYERNQKVWAGRQRSATEI 266

Query: 600  VELAYSEWMEFKSIAHHTESLDTPHKHHT 514
            V  A     EF+ +        TP K HT
Sbjct: 267  VSGAMHCLQEFQEV-------HTPPKTHT 288


>gb|EMJ12186.1| hypothetical protein PRUPE_ppa021345mg [Prunus persica]
          Length = 759

 Score = 84.3 bits (207), Expect = 9e-14
 Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 3/196 (1%)
 Frame = -1

Query: 1128 DRLVWHFEPKGHFTTRSCYMAALKKSRISSFSPECSKMRENEANMWXXXXXXXXXXXXKH 949
            DRL+W  E  G ++ RS Y   L  +     +P  S     +  +W            ++
Sbjct: 396  DRLIWPMERNGSYSVRSGYHW-LHNTECRRRNPRPSSSMTIDPRLWKQIWKADVPPKIRN 454

Query: 948  FIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVSWAN 769
            F+WR L N LAT   + KK +   PMC +C ++ E  EH+L  CP  + VW    ++   
Sbjct: 455  FLWRALRNCLATSANLHKKKIARSPMCPLCNDHPETAEHILLLCPWVEPVWFRCSLNLRI 514

Query: 768  NCDPSISFSQWWSQICRIKAAYIEDRIQLST---YILWWLWKARNLWMFQNIQTSEKEIV 598
            N     SF QW   +   K    ++R +  T   Y  W +WK +   + ++I  S     
Sbjct: 515  NRQAVTSFGQWLGNVIE-KGKTPQERSRCLTVIAYFCWQIWKDKCKAVLEHISPSPARTT 573

Query: 597  ELAYSEWMEFKSIAHH 550
              A     EF     H
Sbjct: 574  HAASIAINEFLGSLDH 589


>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 494

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 2/173 (1%)
 Frame = -1

Query: 1131 KDRLVWHFEPKGHFTTRSCYMAALKKSRISSFSPECSKMRENEANMWXXXXXXXXXXXXK 952
            +D ++WH++ +G +T +S Y  ALK      +SP CS    + ++ W            K
Sbjct: 166  EDEVIWHYDKRGKYTMKSGYQVALKLK--FPYSPNCSN--SSSSSNWSVIWKLTLPAKIK 221

Query: 951  HFIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPV--S 778
             FIWR   N+L T E + K+ +  +  C+ CG   EN  H L  C  A+ VW+L+P+  S
Sbjct: 222  IFIWRAAKNLLPTAENLWKRKIVHEAYCKRCGNRVENTLHALITCKAAKKVWQLSPMASS 281

Query: 777  WANNCDPSISFSQWWSQICRIKAAYIEDRIQLSTYILWWLWKARNLWMFQNIQ 619
            +    +P I       ++ R         +++   ILW +W  RN  +F++++
Sbjct: 282  FQEMGNPDILGDLGGKKLSRAD-------MEMLMTILWVIWYDRNKLVFEDLK 327


>gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
          Length = 509

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 3/190 (1%)
 Frame = -1

Query: 1128 DRLVWHFEPKGHFTTRSCYMAALKKSRISSFSPECSKMRENEANMWXXXXXXXXXXXXKH 949
            DR +W +   G ++ +S  +   + S + S              +W            K 
Sbjct: 205  DRWIWPWTSNGEYSVKSGIVGPPQTSHVVS------------TQVWKGLWKLKSLPKIKF 252

Query: 948  FIWRCLHNILATKEQILKKGMKADPMCQICGENTENLEHVLFHCPRAQIVWKLAPVSWAN 769
            F WR L N +ATK  + K+ +   PMC +C  N E++EH+   CP    VW  +P+++  
Sbjct: 253  FCWRILSNAIATKLNLFKRKISQSPMCPVCENNEESVEHLFLLCPWTAAVWFGSPLNYRV 312

Query: 768  NCDPSISFSQWWSQICRIKAAYIEDRIQLST---YILWWLWKARNLWMFQNIQTSEKEIV 598
            +     +F  W + + ++    I DR +L T   +ILW +WKAR  ++ +  Q     ++
Sbjct: 313  HNQSITTFDNWLNSMFQLNLTSILDRNRLMTIISFILWEIWKARCKFVIEGRQLHPIHVL 372

Query: 597  ELAYSEWMEF 568
              A     EF
Sbjct: 373  HQAMRAANEF 382