BLASTX nr result
ID: Rehmannia26_contig00025977
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00025977
(564 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006345199.1| PREDICTED: uncharacterized protein LOC102586... 92 7e-17
ref|XP_004237592.1| PREDICTED: F-box protein At2g26160-like [Sol... 61 2e-07
ref|XP_004237591.1| PREDICTED: F-box protein At2g26160-like [Sol... 59 1e-06
ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 57 3e-06
ref|XP_006343858.1| PREDICTED: putative F-box protein At3g25750-... 57 4e-06
gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo] 56 5e-06
ref|XP_006368067.1| PREDICTED: F-box protein SKIP23-like [Solanu... 55 9e-06
ref|XP_006344379.1| PREDICTED: F-box protein SKIP23-like [Solanu... 55 9e-06
ref|XP_006343854.1| PREDICTED: probable F-box protein At1g65740-... 55 9e-06
ref|XP_004245513.1| PREDICTED: F-box protein At2g17036-like [Sol... 55 9e-06
>ref|XP_006345199.1| PREDICTED: uncharacterized protein LOC102586577 [Solanum tuberosum]
Length = 419
Score = 92.4 bits (228), Expect = 7e-17
Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 8/95 (8%)
Frame = +1
Query: 7 LEYMDRTLDGLALFIGSNNGFALSAAEFPELKPNSIYYTGPLEWH-------ECVGGYDV 165
L+Y + +L FIGSN GFALS +FPELKPNSIY+T L W +C GG+D+
Sbjct: 316 LQY-NSSLGNRTFFIGSNTGFALSTTQFPELKPNSIYFTDDLTWAYRHREKLKC-GGHDL 373
Query: 166 GIFDYQDRTFSPCFYPSDVQSLNRI-NTPKWFTPN 267
GI+DY++ +FS C+YP D+ + RI P WFTP+
Sbjct: 374 GIYDYKEGSFSSCYYPIDLDKIQRILPAPIWFTPD 408
>ref|XP_004237592.1| PREDICTED: F-box protein At2g26160-like [Solanum lycopersicum]
Length = 461
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Frame = +1
Query: 40 ALFIGSNNGFALSAAEFPELKPNSIYYT----GPLEWHECVGGYDVGIFDYQDRTFSPCF 207
A F+G+N F++ A++FP +KPN IY+T G E GG D+G+F+ D +F P +
Sbjct: 383 AFFLGANASFSVQASQFPGIKPNHIYFTDNCLGAYLHSETGGGLDMGMFNLADSSFQPHY 442
Query: 208 YPSDVQSLNRINTPKWFTP 264
D SL+R+ P W TP
Sbjct: 443 ---DGVSLSRVCPPIWVTP 458
>ref|XP_004237591.1| PREDICTED: F-box protein At2g26160-like [Solanum lycopersicum]
Length = 392
Score = 58.5 bits (140), Expect = 1e-06
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Frame = +1
Query: 40 ALFIGSNNGFALSAAEFPELKPNSIYYT----GPLEWHECVGGYDVGIFDYQDRTFSPCF 207
A F+G+N F++ A++FP +KPN IY+T G + GG D+G+F+ D +F P +
Sbjct: 314 AFFLGANASFSVQASQFPGIKPNHIYFTDNCLGAYLHSKRGGGLDMGMFNLADSSFQPHY 373
Query: 208 YPSDVQSLNRINTPKWFTP 264
D SL+R+ P W TP
Sbjct: 374 ---DGVSLSRVCPPIWVTP 389
>ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
gi|449485151|ref|XP_004157083.1| PREDICTED: F-box
protein SKIP23-like [Cucumis sativus]
Length = 392
Score = 57.0 bits (136), Expect = 3e-06
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +1
Query: 28 LDGLALFIGSNNGFALSAAEFPELKPNSIYYT---GPLEWHECVGGYDVGIFDYQDRTFS 198
L+ +ALF+G N+ A SAA+F E+ N IYYT ++ E D+GIF D +F
Sbjct: 307 LNEMALFVGGNSSMAFSAADFGEISGNCIYYTDDYSDSDYQEQGEEPDMGIFRLCDESFE 366
Query: 199 PC-FYPSDVQSLNRINTPKWFTPN 267
P +Y S R+ P W TPN
Sbjct: 367 PLPYYSGGSHSRRRLLPPIWVTPN 390
>ref|XP_006343858.1| PREDICTED: putative F-box protein At3g25750-like [Solanum
tuberosum]
Length = 385
Score = 56.6 bits (135), Expect = 4e-06
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +1
Query: 22 RTLDGLALFIGSNNGFALSAAEFPELKPNSIYYT----GPLEWHECVGGYDVGIFDYQDR 189
R L A F+G+N ++ A++FP +KPN IY+T G E GG D+G+F+ D
Sbjct: 301 RDLGDQAFFLGANASLSVQASQFPGIKPNHIYFTDNCLGAYLHFEEGGGLDMGVFNLADG 360
Query: 190 TFSPCFYPSDVQSLNRINTPKWFTPN 267
+ P + SL+R+ P W TPN
Sbjct: 361 SIQPHYAG---VSLSRVCPPIWVTPN 383
>gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
Length = 392
Score = 56.2 bits (134), Expect = 5e-06
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +1
Query: 28 LDGLALFIGSNNGFALSAAEFPELKPNSIYYTGPLEWHECVG---GYDVGIFDYQDRTFS 198
L+ +ALF+G N+ A SAA+F E+ N IYYT + G D+GIF D +F
Sbjct: 307 LNEMALFVGGNSSMAFSAADFGEISGNCIYYTDDYSDSDYQGQGEEPDMGIFRLCDESFE 366
Query: 199 PC-FYPSDVQSLNRINTPKWFTPN 267
P +Y S R+ P W TPN
Sbjct: 367 PLPYYSGGSHSRRRLLPPIWVTPN 390
>ref|XP_006368067.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
Length = 251
Score = 55.5 bits (132), Expect = 9e-06
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Frame = +1
Query: 40 ALFIGSNNGFALSAAEFPELKPNSIYYTGPLE----WHECVGGYDVGIFDYQDRTFSPCF 207
ALF+G+N ++ A++FP +KPN IYYT ++E GG D+G+++ + +F P +
Sbjct: 173 ALFLGANASISVQASQFPGVKPNHIYYTDDFVESYLFYEEGGGRDMGVYNIANGSFEPHY 232
Query: 208 YPSDVQSLNRINTPKWFTP 264
+ SL+R+ P W TP
Sbjct: 233 ---NGVSLSRVCPPIWVTP 248
>ref|XP_006344379.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
Length = 390
Score = 55.5 bits (132), Expect = 9e-06
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Frame = +1
Query: 40 ALFIGSNNGFALSAAEFPELKPNSIYYTGPLE----WHECVGGYDVGIFDYQDRTFSPCF 207
ALF+G+N ++ A++FP +KPN IYYT ++E GG D+G+++ + +F P +
Sbjct: 312 ALFLGANASISVQASQFPGVKPNHIYYTDDFVESYLFYEEGGGRDMGVYNIANGSFEPHY 371
Query: 208 YPSDVQSLNRINTPKWFTP 264
+ SL+R+ P W TP
Sbjct: 372 ---NGVSLSRVCPPIWVTP 387
>ref|XP_006343854.1| PREDICTED: probable F-box protein At1g65740-like [Solanum
tuberosum]
Length = 393
Score = 55.5 bits (132), Expect = 9e-06
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Frame = +1
Query: 22 RTLDGLALFIGSNNGFALSAAEFPELKPNSIYYTGP---LEWHECVG-GYDVGIFDYQDR 189
+ L A F+G N+ ++ A++FP +KPN IY+T L H G G D+G+F+ D
Sbjct: 309 KDLGDRAFFLGHNSSISVQASQFPGIKPNHIYFTDNCLCLYLHLREGCGLDMGVFNLADE 368
Query: 190 TFSPCFYPSDVQSLNRINTPKWFTPN 267
+ P + D SL+R+ P W TPN
Sbjct: 369 SIQPHY---DGVSLSRVCPPIWVTPN 391
>ref|XP_004245513.1| PREDICTED: F-box protein At2g17036-like [Solanum lycopersicum]
Length = 389
Score = 55.5 bits (132), Expect = 9e-06
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Frame = +1
Query: 40 ALFIGSNNGFALSAAEFPELKPNSIYYT----GPLEWHECVGGYDVGIFDYQDRTFSPCF 207
A F+G+N ++ A++FP +KPN IY+T G + E G D+G+F+ D + P F
Sbjct: 312 AFFLGANASLSIQASQFPGIKPNCIYFTDNWIGAYLFFEKGCGLDMGVFNLADGSIEP-F 370
Query: 208 YPSDVQSLNRINTPKWFTPN 267
Y D S++R+ P W TPN
Sbjct: 371 Y--DGISVSRVCPPIWVTPN 388