BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00025973
         (588 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343488.1| PREDICTED: pentatricopeptide repeat-containi...   171   2e-40
ref|XP_004250798.1| PREDICTED: pentatricopeptide repeat-containi...   171   2e-40
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]   166   5e-39
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...   164   1e-38
gb|EOX98269.1| Tetratricopeptide repeat (TPR)-like superfamily p...   162   5e-38
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   162   5e-38
emb|CBI32403.3| unnamed protein product [Vitis vinifera]              162   5e-38
gb|EXC20588.1| hypothetical protein L484_027143 [Morus notabilis]     161   1e-37
ref|XP_004493379.1| PREDICTED: pentatricopeptide repeat-containi...   158   1e-36
ref|XP_006487111.1| PREDICTED: pentatricopeptide repeat-containi...   152   8e-35
ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containi...   151   1e-34
ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containi...   148   1e-33
emb|CBI25078.3| unnamed protein product [Vitis vinifera]              147   2e-33
gb|ESW18386.1| hypothetical protein PHAVU_006G036400g [Phaseolus...   138   1e-30
ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containi...   136   4e-30
ref|XP_003624942.1| Pentatricopeptide repeat-containing protein ...   135   8e-30
gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]   135   8e-30
ref|XP_002300569.2| hypothetical protein POPTR_0001s47030g, part...   130   3e-28
ref|XP_006400719.1| hypothetical protein EUTSA_v10012749mg [Eutr...   118   1e-24
ref|NP_567948.1| pentatricopeptide repeat-containing protein [Ar...   116   4e-24

>ref|XP_006343488.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like isoform X1 [Solanum tuberosum]
           gi|565353132|ref|XP_006343489.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like isoform X2 [Solanum tuberosum]
           gi|565353134|ref|XP_006343490.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like isoform X3 [Solanum tuberosum]
           gi|565353136|ref|XP_006343491.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like isoform X4 [Solanum tuberosum]
          Length = 831

 Score =  171 bits (432), Expect = 2e-40
 Identities = 80/135 (59%), Positives = 99/135 (73%)
 Frame = -3

Query: 406 LSKRTDERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVS 227
           LS     +  + DFE LF++CT   + K LHALLIVSGK+QSI+  TRLVN Y+HLG+VS
Sbjct: 47  LSNGVASKKKDFDFERLFHSCTKIYILKCLHALLIVSGKAQSIFIGTRLVNLYAHLGDVS 106

Query: 226 FSRDTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKAC 47
            S+ TF  +  KD+YTWNSMIS+YVRN  F E++ C   MLS+ DV+PDFYTFPPVLKAC
Sbjct: 107 LSQKTFCMIENKDAYTWNSMISSYVRNGHFRESLNCLNEMLSTADVKPDFYTFPPVLKAC 166

Query: 46  KDLIDGTRLHCWVLK 2
             +IDG R+HCW  K
Sbjct: 167 NSIIDGVRIHCWASK 181



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
 Frame = -3

Query: 286 QSIYFATRLVNKYSHLGNVSFSRDTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRM 107
           + +     +V+ Y+ LG +  SR  F+++P KD  +WNSMI+ Y +N   SEA++    M
Sbjct: 390 EDVIMGNAVVDMYAKLGLIHCSRKVFDEIPIKDVVSWNSMITGYAQNGLASEAIEIYNMM 449

Query: 106 LSSIDVRPDFYTFPPVLKACKD---LIDGTRLHCWVLK 2
               D+ P+  T+  +L A      L +GTR H  V K
Sbjct: 450 KECDDIEPNQGTWVSILPAYAHLGALQEGTRTHGHVFK 487


>ref|XP_004250798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Solanum lycopersicum]
          Length = 911

 Score =  171 bits (432), Expect = 2e-40
 Identities = 81/135 (60%), Positives = 99/135 (73%)
 Frame = -3

Query: 406 LSKRTDERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVS 227
           LS     +  E DFE LF++CT   + K LHALLIVSGK+QSI+  TRLVN Y+HLG+VS
Sbjct: 127 LSNGVASKKKEFDFEHLFHSCTKIYILKCLHALLIVSGKAQSIFIGTRLVNLYAHLGDVS 186

Query: 226 FSRDTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKAC 47
            S+ TF  +  KD+YTWNSMIS+YVRN  F E++ C   MLS+ DV+PDFYTFPPVLKAC
Sbjct: 187 LSQKTFCMIENKDAYTWNSMISSYVRNGHFWESLNCLNEMLSTADVKPDFYTFPPVLKAC 246

Query: 46  KDLIDGTRLHCWVLK 2
             +IDG R+HCW  K
Sbjct: 247 NSIIDGVRIHCWASK 261


>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  166 bits (419), Expect = 5e-39
 Identities = 77/125 (61%), Positives = 98/125 (78%)
 Frame = -3

Query: 376 EIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFNQVP 197
           EIDF  LF++ T +  AK LHALL+V+GK QSI+ +TRLVN Y++LG+VS SR TF+Q+P
Sbjct: 119 EIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP 178

Query: 196 RKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKACKDLIDGTRLH 17
           +KD YTWNSMISAYV N  F EA+ C +++L   ++RPDFYTFPPVLKAC  L+DG R+H
Sbjct: 179 QKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIH 238

Query: 16  CWVLK 2
           CW  K
Sbjct: 239 CWAFK 243



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
 Frame = -3

Query: 418 CIGNLSKRTDERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHL 239
           C   L   ++ R     F  +  AC T    +R+H      G   +++ A  L++ YS  
Sbjct: 204 CFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRF 263

Query: 238 GNVSFSRDTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPV 59
           G    +R  F+ +P +D  +WN+MIS  ++N   ++A+     M     ++ +F T   +
Sbjct: 264 GFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE-GIKMNFVTVVSI 322

Query: 58  LKACKDLID---GTRLHCWVLK 2
           L  C  L D      +H +V+K
Sbjct: 323 LPVCPQLGDISTAMLIHLYVIK 344


>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  164 bits (416), Expect = 1e-38
 Identities = 78/132 (59%), Positives = 100/132 (75%)
 Frame = -3

Query: 397 RTDERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSR 218
           R   ++ EIDF  LF++CT + +AKRLHALL+VSGK QS + + RLVN Y+ LG+VS SR
Sbjct: 69  RQPAKNEEIDFNSLFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSR 128

Query: 217 DTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKACKDL 38
            TF+Q+ RKD YTWNSMISAYVRN  F EA+ C +++L     + DFYTFPPVLKAC+ L
Sbjct: 129 GTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTL 188

Query: 37  IDGTRLHCWVLK 2
           +DG ++HCWV K
Sbjct: 189 VDGRKIHCWVFK 200



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
 Frame = -3

Query: 367 FELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFNQVPRKD 188
           F  +  AC T    +++H  +   G    ++ A  L++ YS  G V  +R  F+ +P +D
Sbjct: 178 FPPVLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRD 237

Query: 187 SYTWNSMISAYVRNCCFSEAMKCAFRM-LSSIDVRPDFYTFPPVLKACKDLID---GTRL 20
             +WN+MIS  ++N   ++A+     M L  I++  D  T   +L  C  L D    T +
Sbjct: 238 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGINM--DSVTVASILPVCAQLGDISTATLI 295

Query: 19  HCWVLK 2
           H +V+K
Sbjct: 296 HLYVIK 301


>gb|EOX98269.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 820

 Score =  162 bits (411), Expect = 5e-38
 Identities = 77/134 (57%), Positives = 101/134 (75%)
 Frame = -3

Query: 403 SKRTDERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSF 224
           S   ++    IDF  LF +CT   +AKRLHAL++VSGK+QSI+ + +LVN Y++L +VSF
Sbjct: 38  SNGCEDNDKSIDFNHLFKSCTQLHLAKRLHALVLVSGKAQSIFISAKLVNLYAYLCDVSF 97

Query: 223 SRDTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKACK 44
           SR TF+Q+  KD YTWNSM+SAYVR+  F EA+ C ++  S+  +RPDFYTFPPVLKACK
Sbjct: 98  SRRTFDQINEKDVYTWNSMVSAYVRSGRFQEAVDCFYQFFSTSGLRPDFYTFPPVLKACK 157

Query: 43  DLIDGTRLHCWVLK 2
           +L DG R+HC VLK
Sbjct: 158 NLPDGMRMHCLVLK 171


>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  162 bits (411), Expect = 5e-38
 Identities = 75/125 (60%), Positives = 97/125 (77%)
 Frame = -3

Query: 376 EIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFNQVP 197
           EIDF  LF++ T +  AK LHALL+V+GK QSI+ +TRLVN Y++LG+VS SR TF+Q+P
Sbjct: 119 EIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP 178

Query: 196 RKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKACKDLIDGTRLH 17
           +KD Y WNSMISAYV N  F EA+ C +++L   ++RPDFYTFPPVLKAC  L+DG ++H
Sbjct: 179 QKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIH 238

Query: 16  CWVLK 2
           CW  K
Sbjct: 239 CWAFK 243


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  162 bits (411), Expect = 5e-38
 Identities = 75/125 (60%), Positives = 97/125 (77%)
 Frame = -3

Query: 376 EIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFNQVP 197
           EIDF  LF++ T +  AK LHALL+V+GK QSI+ +TRLVN Y++LG+VS SR TF+Q+P
Sbjct: 19  EIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP 78

Query: 196 RKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKACKDLIDGTRLH 17
           +KD Y WNSMISAYV N  F EA+ C +++L   ++RPDFYTFPPVLKAC  L+DG ++H
Sbjct: 79  QKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIH 138

Query: 16  CWVLK 2
           CW  K
Sbjct: 139 CWAFK 143


>gb|EXC20588.1| hypothetical protein L484_027143 [Morus notabilis]
          Length = 778

 Score =  161 bits (408), Expect = 1e-37
 Identities = 76/128 (59%), Positives = 99/128 (77%)
 Frame = -3

Query: 385 RSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFN 206
           R  +IDF LLF +CT   +AKRLHALL+VSGK + ++ +TRLVN YS+ G+VS SR TF+
Sbjct: 2   RIEKIDFNLLFVSCTKVHLAKRLHALLVVSGKVKDMFLSTRLVNLYSYFGDVSLSRRTFD 61

Query: 205 QVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKACKDLIDGT 26
           Q+P KD YTWNSMISAYVR   F EA+ C +++ S+   +P+FYTFPPVLKAC +L+DG 
Sbjct: 62  QLPEKDIYTWNSMISAYVRTSRFREALHCFYQLSSASGFQPNFYTFPPVLKACGNLVDGK 121

Query: 25  RLHCWVLK 2
           ++HC VLK
Sbjct: 122 KIHCQVLK 129



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
 Frame = -3

Query: 418 CIGNLSKRTDERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHL 239
           C   LS  +  +     F  +  AC      K++H  ++  G    IY A  L++ YS  
Sbjct: 90  CFYQLSSASGFQPNFYTFPPVLKACGNLVDGKKIHCQVLKLGCQWDIYVAASLIHMYSRF 149

Query: 238 GNVSFSRDTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRM-LSSIDVRPDFYTFPP 62
           G V  +R  FN++P +D+ +WNSMIS + +N    EA+     M L   ++ P   T   
Sbjct: 150 GFVGIARKLFNEMPIRDTGSWNSMISGFCQNGNVKEALDVMNEMRLEGENMDP--VTVAS 207

Query: 61  VLKACK---DLIDGTRLHCWVLK 2
           +L  C    D+++G  +H + +K
Sbjct: 208 LLTVCAQSGDILNGMLIHLYAIK 230


>ref|XP_004493379.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cicer arietinum]
          Length = 824

 Score =  158 bits (399), Expect = 1e-36
 Identities = 74/135 (54%), Positives = 96/135 (71%), Gaps = 1/135 (0%)
 Frame = -3

Query: 403 SKRTDERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSF 224
           S   D    E DF  LFN+C    V K+LHALL+V GKSQ++  +T+L+N Y   G++S 
Sbjct: 41  SHNFDSNKKETDFNFLFNSCINVNVTKQLHALLVVLGKSQNVVLSTKLINLYVTFGDISL 100

Query: 223 SRDTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLS-SIDVRPDFYTFPPVLKAC 47
           SR TFN + +K+ ++WNSMI+AYVR+  + EAM C    LS S D+RPDFYTFPP+LKAC
Sbjct: 101 SRSTFNHIHKKNIFSWNSMIAAYVRSSKYHEAMNCVNEFLSVSDDLRPDFYTFPPILKAC 160

Query: 46  KDLIDGTRLHCWVLK 2
            +LIDG +LHCWVLK
Sbjct: 161 VNLIDGKKLHCWVLK 175



 Score = 62.4 bits (150), Expect = 8e-08
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
 Frame = -3

Query: 406 LSKRTDERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVS 227
           LS   D R     F  +  AC      K+LH  ++  G    ++ A+ L+N YS  G ++
Sbjct: 140 LSVSDDLRPDFYTFPPILKACVNLIDGKKLHCWVLKMGFEHDVFVASSLINLYSRFGVLN 199

Query: 226 FSRDTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKAC 47
            +   F  +P +D  +WN+MIS + +N   +EA+      +    V+ D  T   +L  C
Sbjct: 200 AAHKVFVDMPVRDVGSWNAMISGFCQNGNAAEALG-VLNSMKVEGVKMDTVTVSSILPVC 258

Query: 46  ---KDLIDGTRLHCWVLK 2
               D+++G  +H  VLK
Sbjct: 259 AQSDDIVNGVLIHLHVLK 276


>ref|XP_006487111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Citrus sinensis]
          Length = 820

 Score =  152 bits (383), Expect = 8e-35
 Identities = 70/130 (53%), Positives = 99/130 (76%)
 Frame = -3

Query: 391 DERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDT 212
           +  S EIDF+ LF +CT     KRLHALL+VSGK ++++ +T+LVN Y++LG++SFSR T
Sbjct: 42  ENESREIDFDDLFQSCTKLHHVKRLHALLLVSGKIKTVFSSTKLVNFYANLGDLSFSRHT 101

Query: 211 FNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKACKDLID 32
           F+ +  ++ YTWNSMIS YVR+   SEA+ C ++   +  +RPDFYTFPPVLKAC++L+D
Sbjct: 102 FDHISYRNVYTWNSMISVYVRSGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD 161

Query: 31  GTRLHCWVLK 2
           G ++HC VLK
Sbjct: 162 GKKIHCSVLK 171


>ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Fragaria vesca subsp. vesca]
          Length = 867

 Score =  151 bits (381), Expect = 1e-34
 Identities = 70/124 (56%), Positives = 94/124 (75%)
 Frame = -3

Query: 373 IDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFNQVPR 194
           +D   LF +CT    AKRLHALL+VSGK+Q I+ + +LVN+Y++LG+VSFSR  F+ +PR
Sbjct: 96  VDIGHLFQSCTKLHHAKRLHALLVVSGKAQDIFLSAKLVNQYAYLGDVSFSRRAFDSMPR 155

Query: 193 KDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKACKDLIDGTRLHC 14
           KD YTWNSM+SAYVR+  F EA+ C  + L +  +RPDFYTFPPVLKAC +L  G ++H 
Sbjct: 156 KDVYTWNSMVSAYVRSGRFQEAVDCFSQFLVTSGLRPDFYTFPPVLKACGNLNVGKKIHS 215

Query: 13  WVLK 2
           W++K
Sbjct: 216 WLIK 219



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
 Frame = -3

Query: 367 FELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFNQVPRKD 188
           F  +  AC    V K++H+ LI  G    ++ A  L++ YS  G +S +R  F+++P +D
Sbjct: 197 FPPVLKACGNLNVGKKIHSWLIKLGLEWDVFVAASLIHMYSRSGLISVARKLFDEMPSRD 256

Query: 187 SYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKAC---KDLIDGTRLH 17
              WN+MIS + +N   ++A+     M S   V+ D  T   +L AC    D + G  +H
Sbjct: 257 MGCWNAMISGFCQNGNAADALGVLIEMRSE-GVKMDPITVASLLTACAQSDDSLSGILIH 315

Query: 16  CWVLK 2
            +V+K
Sbjct: 316 LYVVK 320


>ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like isoform X1 [Glycine max]
           gi|571544149|ref|XP_006602168.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like isoform X2 [Glycine max]
           gi|571544153|ref|XP_006602169.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like isoform X3 [Glycine max]
           gi|571544157|ref|XP_006602170.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like isoform X4 [Glycine max]
           gi|571544163|ref|XP_006602171.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like isoform X5 [Glycine max]
          Length = 824

 Score =  148 bits (373), Expect = 1e-33
 Identities = 68/134 (50%), Positives = 92/134 (68%)
 Frame = -3

Query: 403 SKRTDERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSF 224
           +K     +  +DF L+F +CT   VAK+LHALL+V GK+Q +   T+LV  Y+ LG++S 
Sbjct: 42  NKNNKNNNVVVDFNLVFRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSL 101

Query: 223 SRDTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKACK 44
           S  TF  + RK+ ++WNSM+SAYVR   + ++M C   +LS   VRPDFYTFPPVLKAC 
Sbjct: 102 SSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL 161

Query: 43  DLIDGTRLHCWVLK 2
            L DG ++HCWVLK
Sbjct: 162 SLADGEKMHCWVLK 175



 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
 Frame = -3

Query: 418 CIGNLSKRTDERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHL 239
           C+  L   +  R     F  +  AC +    +++H  ++  G    +Y A  L++ YS  
Sbjct: 136 CVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRF 195

Query: 238 GNVSFSRDTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPV 59
           G V  +   F  +P +D  +WN+MIS + +N   +EA++   RM +  +V+ D  T   +
Sbjct: 196 GAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTE-EVKMDTVTVSSM 254

Query: 58  LKAC---KDLIDGTRLHCWVLK 2
           L  C    D++ G  +H +V+K
Sbjct: 255 LPICAQSNDVVGGVLVHLYVIK 276


>emb|CBI25078.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  147 bits (372), Expect = 2e-33
 Identities = 74/134 (55%), Positives = 98/134 (73%), Gaps = 4/134 (2%)
 Frame = -3

Query: 391 DERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDT 212
           + ++ EIDF  LF++CT + +AKRLHALL+VSGK QS + + RLVN Y+ LG+VS SR T
Sbjct: 45  ENQNEEIDFNSLFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGT 104

Query: 211 FNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKACK---- 44
           F+Q+ RKD YTWNSMISAYVRN  F EA+ C +++L     + DFYTFPPVLKAC+    
Sbjct: 105 FDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLLG 164

Query: 43  DLIDGTRLHCWVLK 2
           D+   T +H +V+K
Sbjct: 165 DISTATLIHLYVIK 178


>gb|ESW18386.1| hypothetical protein PHAVU_006G036400g [Phaseolus vulgaris]
          Length = 816

 Score =  138 bits (347), Expect = 1e-30
 Identities = 64/120 (53%), Positives = 89/120 (74%)
 Frame = -3

Query: 361 LLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFNQVPRKDSY 182
           ++F++CT    AK+LHALL V GK+Q++   T+LV  Y+ LG++S SR+TF  + RK+ +
Sbjct: 48  VVFHSCTDIGNAKQLHALLTVLGKAQNVVLFTQLVTLYATLGDLSLSRNTFEHIQRKNIF 107

Query: 181 TWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKACKDLIDGTRLHCWVLK 2
           TWNSM++AYVR   + EAM C   +LS+  VRPDFYTF PVLKAC  ++DG ++HCWVLK
Sbjct: 108 TWNSMVAAYVRCGRYREAMYCVSELLSNSCVRPDFYTFAPVLKACVSVVDGEKMHCWVLK 167



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
 Frame = -3

Query: 418 CIGNLSKRTDERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHL 239
           C+  L   +  R     F  +  AC +    +++H  ++  G    +Y A  L++ YS  
Sbjct: 128 CVSELLSNSCVRPDFYTFAPVLKACVSVVDGEKMHCWVLKMGFEHDVYVAASLIHLYSRF 187

Query: 238 GNVSFSRDTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPV 59
             V  +   F+ +P +D  +WN+MIS +++N   + A+    RM     V+ D  T   V
Sbjct: 188 SAVDVAHKVFDDMPVRDVGSWNAMISGFLQNGKAARALGVLGRMKVE-GVKMDTVTVASV 246

Query: 58  LKAC---KDLIDGTRLHCWVLK 2
           L  C    D++ G  +H +V+K
Sbjct: 247 LPVCAQVNDVVCGMLVHLYVIK 268


>ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
           gi|449476583|ref|XP_004154777.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  136 bits (343), Expect = 4e-30
 Identities = 65/125 (52%), Positives = 90/125 (72%)
 Frame = -3

Query: 376 EIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFNQVP 197
           EIDF  +F  CT   +AK+LHALL+VSGK+QSI+ + +L+N+Y+ LG++  +R TF+Q+ 
Sbjct: 43  EIDFNRIFLYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQ 102

Query: 196 RKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKACKDLIDGTRLH 17
            KD YTWNSMISAY R   F  A+ C    LS+  ++ D YTFPPV++AC +L DG ++H
Sbjct: 103 TKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRKVH 162

Query: 16  CWVLK 2
           C VLK
Sbjct: 163 CLVLK 167



 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
 Frame = -3

Query: 418 CIGNLSKRTDERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHL 239
           C       +  +S    F  +  AC   +  +++H L++  G    +Y A   ++ YS  
Sbjct: 128 CFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRF 187

Query: 238 GNVSFSRDTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPV 59
           G VS + + F+ +  +D  TWN+MIS +  N   +EA++  F  +    V  D  T   +
Sbjct: 188 GFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALE-VFDEMRFKSVSMDSVTISSL 246

Query: 58  LKAC---KDLIDGTRLHCWVLK 2
           L  C    D+I G  +H + +K
Sbjct: 247 LPICVQLDDIISGVLIHVYAIK 268


>ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499957|gb|AES81160.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  135 bits (340), Expect = 8e-30
 Identities = 64/128 (50%), Positives = 87/128 (67%), Gaps = 3/128 (2%)
 Frame = -3

Query: 376 EIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFNQVP 197
           + DF  LFN+C      K+LHALL+V GKSQ+I  +T+L+N Y   G++S SR TF+ + 
Sbjct: 22  DADFNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81

Query: 196 RKDSYTWNSMISAYVRNCCFSEAMKCA---FRMLSSIDVRPDFYTFPPVLKACKDLIDGT 26
           +K+ ++WNS+ISAYVR   + EAM C    F M     +RPDFYTFPP+LKAC  L+DG 
Sbjct: 82  KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGK 141

Query: 25  RLHCWVLK 2
           ++HC V K
Sbjct: 142 KVHCCVFK 149



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
 Frame = -3

Query: 367 FELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFNQVPRKD 188
           F  +  AC +    K++H  +   G    ++ A  LV+ YS  G +  +   F  +P KD
Sbjct: 127 FPPILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKD 186

Query: 187 SYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKAC---KDLIDGTRLH 17
             +WN+MIS + +N   + A+    RM     V+ D  T   +L  C    D+I+G  +H
Sbjct: 187 VGSWNAMISGFCQNGNAAGALGVLNRMKGE-GVKMDTITVASILPVCAQSDDVINGVLIH 245

Query: 16  CWVLK 2
             VLK
Sbjct: 246 LHVLK 250


>gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  135 bits (340), Expect = 8e-30
 Identities = 64/128 (50%), Positives = 87/128 (67%), Gaps = 3/128 (2%)
 Frame = -3

Query: 376 EIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFNQVP 197
           + DF  LFN+C      K+LHALL+V GKSQ+I  +T+L+N Y   G++S SR TF+ + 
Sbjct: 22  DADFNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81

Query: 196 RKDSYTWNSMISAYVRNCCFSEAMKCA---FRMLSSIDVRPDFYTFPPVLKACKDLIDGT 26
           +K+ ++WNS+ISAYVR   + EAM C    F M     +RPDFYTFPP+LKAC  L+DG 
Sbjct: 82  KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGK 141

Query: 25  RLHCWVLK 2
           ++HC V K
Sbjct: 142 KVHCCVFK 149



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
 Frame = -3

Query: 367 FELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFNQVPRKD 188
           F  +  AC +    K++H  +   G    ++ A  LV+ YS  G +  +   F  +P KD
Sbjct: 127 FPPILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKD 186

Query: 187 SYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKAC---KDLIDGTRLH 17
             +WN+MIS + +N   + A+    RM     V+ D  T   +L  C    D+I+G  +H
Sbjct: 187 VGSWNAMISGFCQNGNAAGALGVLNRMKGE-GVKMDTITVASILPVCAQSDDVINGVLIH 245

Query: 16  CWVLK 2
             VLK
Sbjct: 246 LHVLK 250


>ref|XP_002300569.2| hypothetical protein POPTR_0001s47030g, partial [Populus
           trichocarpa] gi|550350056|gb|EEE85374.2| hypothetical
           protein POPTR_0001s47030g, partial [Populus trichocarpa]
          Length = 751

 Score =  130 bits (327), Expect = 3e-28
 Identities = 61/124 (49%), Positives = 85/124 (68%)
 Frame = -3

Query: 373 IDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFNQVPR 194
           IDF  LF +CT  +  K  H L++VSG+ +  + ++++VN YS  G+VS +  TF+ +P 
Sbjct: 3   IDFNALFKSCTKLQQVKCAHTLVVVSGRFKDNFLSSKIVNLYSQHGDVSLAWWTFHHLPN 62

Query: 193 KDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKACKDLIDGTRLHC 14
           KD YTWNSM  AYV +  F EA+ C  +  S+  +RPDFYTFPPV+KAC DL+DG ++HC
Sbjct: 63  KDVYTWNSMAFAYVSHGRFCEALGCFNQFFSTSGLRPDFYTFPPVVKACGDLLDGKKIHC 122

Query: 13  WVLK 2
            VLK
Sbjct: 123 LVLK 126



 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
 Frame = -3

Query: 418 CIGNLSKRTDERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHL 239
           C       +  R     F  +  AC      K++H L++  G    ++ A  LV+ YS  
Sbjct: 87  CFNQFFSTSGLRPDFYTFPPVVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRF 146

Query: 238 GNVSFSRDTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPV 59
           G V  +R  F+ +P +D  +WN+MIS Y +N   +EA+  A  M     V+ D  T   V
Sbjct: 147 GLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMRLE-GVKMDAITVASV 205

Query: 58  LKACK---DLIDGTRLHCWVLK 2
           L  C    D++ G  +H +V+K
Sbjct: 206 LPVCAQVGDILSGKLIHLYVIK 227


>ref|XP_006400719.1| hypothetical protein EUTSA_v10012749mg [Eutrema salsugineum]
           gi|557101809|gb|ESQ42172.1| hypothetical protein
           EUTSA_v10012749mg [Eutrema salsugineum]
          Length = 766

 Score =  118 bits (295), Expect = 1e-24
 Identities = 55/120 (45%), Positives = 79/120 (65%)
 Frame = -3

Query: 361 LLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGNVSFSRDTFNQVPRKDSY 182
           +LF  CT  + AK LHA LIVS   Q++  + +LVN Y +LGNV  +R  F+ +  +D Y
Sbjct: 1   MLFRCCTKLQSAKCLHARLIVSNAIQNVCISAKLVNLYCYLGNVVLARHAFDHIQNRDVY 60

Query: 181 TWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLKACKDLIDGTRLHCWVLK 2
            WN+MIS YVR    SEA++C    + +  ++PD+ TFP VLKAC++L+DG ++HC  LK
Sbjct: 61  AWNAMISGYVRLGSSSEAIRCFSLFMQTSGLQPDYRTFPSVLKACRNLLDGMKIHCTALK 120


>ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635622|sp|O81767.2|PP348_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
           gi|332660906|gb|AEE86306.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  116 bits (291), Expect = 4e-24
 Identities = 60/137 (43%), Positives = 82/137 (59%)
 Frame = -3

Query: 412 GNLSKRTDERSGEIDFELLFNACTTSEVAKRLHALLIVSGKSQSIYFATRLVNKYSHLGN 233
           GN SK  D      D   LF  CT  + AK LHA L+VS + Q++  + +LVN Y +LGN
Sbjct: 48  GNESKEID------DVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGN 101

Query: 232 VSFSRDTFNQVPRKDSYTWNSMISAYVRNCCFSEAMKCAFRMLSSIDVRPDFYTFPPVLK 53
           V+ +R TF+ +  +D Y WN MIS Y R    SE ++C    + S  + PD+ TFP VLK
Sbjct: 102 VALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLK 161

Query: 52  ACKDLIDGTRLHCWVLK 2
           AC+ +IDG ++HC  LK
Sbjct: 162 ACRTVIDGNKIHCLALK 178