BLASTX nr result

ID: Rehmannia26_contig00025967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00025967
         (476 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vit...    60   3e-07
gb|EXC19420.1| RING-H2 finger protein ATL54 [Morus notabilis]          59   7e-07
ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854...    57   3e-06
ref|XP_006466274.1| PREDICTED: RING-H2 finger protein ATL52-like...    55   7e-06
ref|XP_006426316.1| hypothetical protein CICLE_v10025698mg [Citr...    55   7e-06
ref|XP_002522602.1| ring finger protein, putative [Ricinus commu...    55   7e-06
gb|EOY15913.1| RING/U-box superfamily protein, putative [Theobro...    55   1e-05
ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like...    55   1e-05
ref|XP_003531024.1| PREDICTED: RING-H2 finger protein ATL54-like...    55   1e-05
ref|XP_002513984.1| ring finger protein, putative [Ricinus commu...    55   1e-05
ref|XP_002301077.1| zinc finger family protein [Populus trichoca...    55   1e-05

>ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera]
          Length = 379

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/100 (32%), Positives = 51/100 (51%)
 Frame = +2

Query: 176 NPPSQNHQLSPFLIVMICXXXXXXXXXXXXXXXXXXXXXXNHSRTTINSPPSDNDHNPGE 355
           +PP +  +LSP+L++ +                         SR   +  P++  H    
Sbjct: 53  SPPRKAEKLSPYLVICLSVLATTFFVVFLYVFYKKYYSRRRLSRRRNSQAPAEGAH---- 108

Query: 356 DHFLDEHQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKK 475
           D F+DE Q PV +DHPIW+IRT+GL  +VI++I +  YK+
Sbjct: 109 DDFIDEDQEPV-VDHPIWYIRTVGLQPSVISAITICKYKR 147


>gb|EXC19420.1| RING-H2 finger protein ATL54 [Morus notabilis]
          Length = 368

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 42/110 (38%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
 Frame = +2

Query: 170 CINPPSQ-------NHQLSPFLIVMICXXXXXXXXXXXXXXXXXXXXXXNHSRTTINSPP 328
           CI+PP+        +H+ S FL V I                       N+SR   +S  
Sbjct: 46  CISPPTSVISYSHNHHKFSTFLTVTIVLLAASFLVICGYVFYTKYY---NNSRRRNSSRQ 102

Query: 329 SDNDHNPGEDH-FLDEHQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKK 475
           SD  H   +DH FLDE   P + DHPIW+IRT GL  ++INSI V  YKK
Sbjct: 103 SD--HRNRDDHEFLDEEHGPTL-DHPIWYIRTAGLQPSIINSIAVLKYKK 149


>ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854068 [Vitis vinifera]
          Length = 372

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/99 (34%), Positives = 48/99 (48%)
 Frame = +2

Query: 179 PPSQNHQLSPFLIVMICXXXXXXXXXXXXXXXXXXXXXXNHSRTTINSPPSDNDHNPGED 358
           PP + H++SP LI ++C                      N SR +   PP  N  +   +
Sbjct: 27  PPLRPHEISPILIFIVCTLGAVFFVVSCCTVVLKYYSGWNRSRRS--DPPVQNHTH---E 81

Query: 359 HFLDEHQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKK 475
            F+DE Q PV+  HPIW I T+GL ++VI+ I V  Y K
Sbjct: 82  DFIDEEQSPVVY-HPIWLINTVGLQQSVIDLITVIKYNK 119


>ref|XP_006466274.1| PREDICTED: RING-H2 finger protein ATL52-like [Citrus sinensis]
          Length = 422

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +2

Query: 353 EDHFLDEHQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKK 475
           ++ F DE   PV+ DHPIW+I TIGLP++VI+SI VF YKK
Sbjct: 120 QEDFFDEDHGPVL-DHPIWYINTIGLPQSVIDSIAVFKYKK 159


>ref|XP_006426316.1| hypothetical protein CICLE_v10025698mg [Citrus clementina]
           gi|557528306|gb|ESR39556.1| hypothetical protein
           CICLE_v10025698mg [Citrus clementina]
          Length = 420

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +2

Query: 353 EDHFLDEHQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKK 475
           ++ F DE   PV+ DHPIW+I TIGLP++VI+SI VF YKK
Sbjct: 118 QEDFFDEDHGPVL-DHPIWYINTIGLPQSVIDSIAVFKYKK 157


>ref|XP_002522602.1| ring finger protein, putative [Ricinus communis]
           gi|223538078|gb|EEF39689.1| ring finger protein,
           putative [Ricinus communis]
          Length = 378

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/58 (46%), Positives = 36/58 (62%)
 Frame = +2

Query: 302 SRTTINSPPSDNDHNPGEDHFLDEHQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKK 475
           SR   +S P D  +    + FLDE   P++ DHP+W+I TIGL  +VINSI V  YK+
Sbjct: 90  SRRGRSSQPQDQRNETTHEEFLDEDHGPIL-DHPVWYINTIGLQPSVINSISVCKYKR 146


>gb|EOY15913.1| RING/U-box superfamily protein, putative [Theobroma cacao]
          Length = 394

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
 Frame = +2

Query: 179 PPS---QNHQLSPFLIVMICXXXXXXXXXXXXXXXXXXXXXXNHSRTTINSPPSDNDHNP 349
           PPS   QNH +SP++I+++                         SR     P +  D + 
Sbjct: 45  PPSLSDQNHYISPYVIILVSVLASFFLLIGYYVIIVKSCFGLCWSRNN-RQPQAQTDGS- 102

Query: 350 GEDHFLDEHQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKK 475
            ++ FLDE++    +DHPIW I T+GL +++INSI V  YKK
Sbjct: 103 -DEEFLDENR----VDHPIWFITTVGLQQSIINSITVCKYKK 139


>ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
          Length = 403

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
 Frame = +2

Query: 302 SRTTINSPPSDN----DHNPGEDHFLDEHQRPVMIDHPIWHIRTIGLPETVINSIPVFNY 469
           SR  ++SP +       H+  +D   DE     M+DHPIW+IRT+GL +++IN+I V  Y
Sbjct: 110 SRRRVSSPSTSRRQTQTHHDDDDFVDDEEHHGRMVDHPIWYIRTLGLQQSIINAITVCKY 169

Query: 470 KK 475
           KK
Sbjct: 170 KK 171


>ref|XP_003531024.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
          Length = 358

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/56 (46%), Positives = 36/56 (64%)
 Frame = +2

Query: 308 TTINSPPSDNDHNPGEDHFLDEHQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKK 475
           TT++ P +       E +FLDE +   ++DHPIW+IRT GL + VI +I V NYKK
Sbjct: 101 TTLSQPQT-------EQYFLDEEEHGPVVDHPIWYIRTTGLQQAVITAITVCNYKK 149


>ref|XP_002513984.1| ring finger protein, putative [Ricinus communis]
           gi|223547070|gb|EEF48567.1| ring finger protein,
           putative [Ricinus communis]
          Length = 393

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/96 (34%), Positives = 48/96 (50%)
 Frame = +2

Query: 188 QNHQLSPFLIVMICXXXXXXXXXXXXXXXXXXXXXXNHSRTTINSPPSDNDHNPGEDHFL 367
           Q H LSP++I+++                         SR    +P S+ D+   ++ FL
Sbjct: 53  QEHHLSPYVIILVSVLASFFLVVSYYVIIAKSCPGWCSSRNN-RAPQSEADNT--DEEFL 109

Query: 368 DEHQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKK 475
           DE+Q    +DHPIW I T GL +++INSI V  YKK
Sbjct: 110 DENQ----VDHPIWFITTAGLQQSIINSITVCKYKK 141


>ref|XP_002301077.1| zinc finger family protein [Populus trichocarpa]
           gi|222842803|gb|EEE80350.1| zinc finger family protein
           [Populus trichocarpa]
          Length = 389

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
 Frame = +2

Query: 155 SDCYSCINPPS-----QNHQLSPFLIVMICXXXXXXXXXXXXXXXXXXXXXXNHSRTTIN 319
           SD Y    PP      Q H LSP++I+++                         SR    
Sbjct: 37  SDYYLLPPPPPPPFLPQEHHLSPYVIIIVALLASFFLIVSYYVIVAKSCSGWCGSRNNTE 96

Query: 320 SPPSDNDHNPGEDHFLDEHQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKK 475
               ++D    ++ FLDE++    +DHPIW I TIGL +++INSI V  YKK
Sbjct: 97  PQAQEDDT---DEEFLDENR----VDHPIWFITTIGLQQSIINSITVCKYKK 141


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