BLASTX nr result
ID: Rehmannia26_contig00025725
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00025725
(611 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 184 1e-44
gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group] 184 1e-44
gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Jap... 184 2e-44
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group] 184 2e-44
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc... 184 2e-44
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group] 184 2e-44
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group] 184 2e-44
gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subc... 184 2e-44
emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group] 184 2e-44
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16... 184 2e-44
gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subc... 183 3e-44
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays] 183 3e-44
gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group] 183 3e-44
gb|AAP53927.1| retrotransposon protein, putative, Ty1-copia subc... 183 4e-44
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s... 182 8e-44
gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subc... 182 8e-44
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc... 182 8e-44
gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subc... 182 8e-44
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc... 182 8e-44
gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-... 182 8e-44
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 184 bits (468), Expect = 1e-44
Identities = 90/191 (47%), Positives = 129/191 (67%)
Frame = -1
Query: 575 VSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLVRNGYKVVFESN 396
V MGN + +++ G+G+V L ++SGK L+L V ++P+IRKNL+S SLL +G+++VF SN
Sbjct: 365 VFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFXSN 424
Query: 395 KVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTWHGRLGHVNSRT 216
KVV+S+ G ++GKG+M DG+++ S +E + WHGRLGHVN T
Sbjct: 425 KVVLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKASTSTYMLESSNLWHGRLGHVNYDT 484
Query: 215 IKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETMLLGLIHSDICDSNHVLTR 36
++R+++L+ IP IN KCE CV+AK R +SV++ T L LIHSDICD V TR
Sbjct: 485 LRRLINLNHIPTFQINSNHKCETCVEAKLTRSSFQSVERNTEPLDLIHSDICDLKFVQTR 544
Query: 35 GGNQYFITFID 3
GGN+YFITF+D
Sbjct: 545 GGNKYFITFVD 555
>gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1289
Score = 184 bits (468), Expect = 1e-44
Identities = 98/203 (48%), Positives = 129/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 317 FSSYQVARGSTVLMGNGSQASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 377 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 435 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+TFID
Sbjct: 495 SDLCEMNGVLTKGGKRYFMTFID 517
>gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Japonica Group]
gi|57863849|gb|AAW56890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1274
Score = 184 bits (467), Expect = 2e-44
Identities = 98/203 (48%), Positives = 129/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 317 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 377 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 435 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+TFID
Sbjct: 495 SDLCEMNGVLTKGGKRYFMTFID 517
>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
Length = 1314
Score = 184 bits (467), Expect = 2e-44
Identities = 98/203 (48%), Positives = 129/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 289 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 348
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 349 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 406
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 407 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 466
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+TFID
Sbjct: 467 SDLCEMNGVLTKGGKRYFMTFID 489
>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 184 bits (467), Expect = 2e-44
Identities = 98/203 (48%), Positives = 129/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 278 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 337
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 338 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 395
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 396 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 455
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+TFID
Sbjct: 456 SDLCEMNGVLTKGGKRYFMTFID 478
>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 184 bits (467), Expect = 2e-44
Identities = 98/203 (48%), Positives = 129/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 317 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 377 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 435 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+TFID
Sbjct: 495 SDLCEMNGVLTKGGKRYFMTFID 517
>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
Length = 1320
Score = 184 bits (467), Expect = 2e-44
Identities = 98/203 (48%), Positives = 129/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 317 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 377 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 435 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+TFID
Sbjct: 495 SDLCEMNGVLTKGGKRYFMTFID 517
>gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1151
Score = 184 bits (466), Expect = 2e-44
Identities = 98/203 (48%), Positives = 129/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 188 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 247
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 248 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 305
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETM-LLGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + LL L+H
Sbjct: 306 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLALLELLH 365
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+T ID
Sbjct: 366 SDLCEMNGVLTKGGKRYFMTLID 388
>emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group]
Length = 1264
Score = 184 bits (466), Expect = 2e-44
Identities = 98/203 (48%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 317 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
RNG+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 377 RNGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 435 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+T ID
Sbjct: 495 SDLCEMNGVLTKGGKRYFMTLID 517
>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
gag/pol protein [Zea mays]
Length = 1279
Score = 184 bits (466), Expect = 2e-44
Identities = 94/203 (46%), Positives = 131/203 (64%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV + + MGNGS A VLG G V L +SGK + L V H+P I+KNL+SAS+L
Sbjct: 293 FTSYQVGRSGALLMGNGSRAHVLGVGTVILKFTSGKTVPLKSVQHVPSIKKNLVSASMLC 352
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+GYKVV ESNK V+S+HG F+GKG+ GLFR S+ + D W
Sbjct: 353 RDGYKVVLESNKCVVSKHGTFVGKGYECGGLFR----LSLHDVCNKLVNSVNFSDESDLW 408
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H R H + + R+ +++LIPK ++ K KC +CV++KQPRKPHK+ + ++ L L+H
Sbjct: 409 HSRFCHASFGCLMRLANINLIPKFNLVKKSKCHVCVESKQPRKPHKAAEARSLAPLELVH 468
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N +LT+GG +YF+TFID
Sbjct: 469 SDLCEMNGILTKGGKRYFLTFID 491
>gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1361
Score = 183 bits (465), Expect = 3e-44
Identities = 98/203 (48%), Positives = 129/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L+
Sbjct: 402 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSDSRLI 461
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 462 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 519
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHKS ++ + L L+H
Sbjct: 520 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKSAEERNLAPLELLH 579
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+T ID
Sbjct: 580 SDLCEMNGVLTKGGKRYFMTLID 602
>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
Length = 1292
Score = 183 bits (465), Expect = 3e-44
Identities = 94/203 (46%), Positives = 131/203 (64%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV + + MGNGS A VLG G V L +SGK + L V H+P I+KNL+SAS+L
Sbjct: 333 FTSYQVGRSGALLMGNGSRAHVLGVGTVILKFTSGKTVPLKSVQHVPSIKKNLVSASMLC 392
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+GYKVV ESNK V+S+HG F+GKG+ GLFR S+ + D W
Sbjct: 393 RDGYKVVLESNKCVVSKHGTFVGKGYDCGGLFR----LSLHDVCNKLVNSVHFSDESDLW 448
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H R H + + R+ +++LIPK ++ K KC +CV++KQPRKPHK+ + ++ L L+H
Sbjct: 449 HSRFCHASFGCLMRLANINLIPKFNLVKKSKCHVCVESKQPRKPHKAAEARSLAPLELVH 508
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N +LT+GG +YF+TFID
Sbjct: 509 SDLCEMNGILTKGGKRYFLTFID 531
>gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1229
Score = 183 bits (465), Expect = 3e-44
Identities = 98/203 (48%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 317 FSSYQVARGSTVLMGNGSHASVHGVGMVDLMFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 377 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCYKSVNHICGSVDDE--ANVW 434
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 435 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YFIT ID
Sbjct: 495 SDLCEMNGVLTKGGKRYFITLID 517
>gb|AAP53927.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1297
Score = 183 bits (464), Expect = 4e-44
Identities = 98/203 (48%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I KNL+S S L
Sbjct: 317 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDKNLVSGSRLT 376
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 377 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 435 HSRLYHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+T ID
Sbjct: 495 SDLCEMNGVLTKGGKRYFMTLID 517
>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 182 bits (461), Expect = 8e-44
Identities = 97/203 (47%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 317 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 377 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 435 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+T ID
Sbjct: 495 SDLCEMNGVLTKGGKRYFMTLID 517
>gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1468
Score = 182 bits (461), Expect = 8e-44
Identities = 97/203 (47%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 404 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 463
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 464 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 521
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 522 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 581
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+T ID
Sbjct: 582 SDLCEMNGVLTKGGKRYFMTLID 604
>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 182 bits (461), Expect = 8e-44
Identities = 97/203 (47%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 317 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 377 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 435 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+T ID
Sbjct: 495 SDLCEMNGVLTKGGKRYFMTLID 517
>gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1805
Score = 182 bits (461), Expect = 8e-44
Identities = 97/203 (47%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 802 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 861
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 862 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 919
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 920 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 979
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+T ID
Sbjct: 980 SDLCEMNGVLTKGGKRYFMTLID 1002
>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 182 bits (461), Expect = 8e-44
Identities = 97/203 (47%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 317 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 377 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 435 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLH 494
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+T ID
Sbjct: 495 SDLCEMNGVLTKGGKRYFMTLID 517
>gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|62733724|gb|AAX95834.1|
retrotransposon protein, putative, Ty1-copia sub-class
[Oryza sativa Japonica Group] gi|77550359|gb|ABA93156.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1277
Score = 182 bits (461), Expect = 8e-44
Identities = 97/203 (47%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Frame = -1
Query: 608 FPS*QVSGTRTVSMGNGSVAQVLGEGQVQLTLSSGKVLSLDGVCHIPDIRKNLISASLLV 429
F S QV+ TV MGNGS A V G G V L +SGK++ L V H+P I +NL+S S L
Sbjct: 317 FSSYQVARGSTVLMGNGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPSIDRNLVSGSRLT 376
Query: 428 RNGYKVVFESNKVVISRHGQFIGKGFMLDGLFRXXXXXXXXXXXXXXXXSIANVECCDTW 249
R+G+K+VFESNKVV+S+HG FIGKG+ GLFR S+ + + W
Sbjct: 377 RDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDDE--ANVW 434
Query: 248 HGRLGHVNSRTIKRMMHLDLIPKTSINVKEKCEICVQAKQPRKPHKSVDKETML-LGLIH 72
H RL H+N + R+ + LIPK SI KC CVQ+KQPRKPHK+ ++ + L L+H
Sbjct: 435 HSRLCHINFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLASLELLH 494
Query: 71 SDICDSNHVLTRGGNQYFITFID 3
SD+C+ N VLT+GG +YF+T ID
Sbjct: 495 SDLCEMNGVLTKGGKRYFMTLID 517