BLASTX nr result
ID: Rehmannia26_contig00025329
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00025329
(423 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 68 1e-09
emb|CAN82094.1| hypothetical protein VITISV_031210 [Vitis vinifera] 64 3e-08
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 62 6e-08
ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304... 59 5e-07
emb|CAN76301.1| hypothetical protein VITISV_004811 [Vitis vinifera] 59 5e-07
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 59 7e-07
ref|XP_002280533.2| PREDICTED: uncharacterized protein LOC100266... 59 7e-07
emb|CAN74335.1| hypothetical protein VITISV_010831 [Vitis vinifera] 59 9e-07
ref|XP_004301926.1| PREDICTED: uncharacterized protein LOC101300... 58 1e-06
emb|CAN66495.1| hypothetical protein VITISV_034388 [Vitis vinifera] 58 1e-06
emb|CAN77480.1| hypothetical protein VITISV_021632 [Vitis vinifera] 57 2e-06
emb|CAN70941.1| hypothetical protein VITISV_002864 [Vitis vinifera] 57 3e-06
gb|EMJ15703.1| hypothetical protein PRUPE_ppa016706mg, partial [... 56 6e-06
emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera] 55 1e-05
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 68.2 bits (165), Expect = 1e-09
Identities = 43/140 (30%), Positives = 69/140 (49%)
Frame = -3
Query: 421 ICETKKKSAFVQTVCRNLRLGDCWKYVNPIGTKGGMLVGWRNSVNVIRVHSCQFCMEIQF 242
+ ETK ++Q V +L DC K V PIG GG+ + + V ++ C ++I+
Sbjct: 34 LSETKNDLVYLQNVQVSLGF-DCLKTVEPIGNSGGLALFYSRDYPVKFIYVCDRLIDIET 92
Query: 241 KREGDPKEYWAIFVYASNDCHIRESQWMYLRNSKVKWGKYWILGGDFNDIRNIGEKKGGK 62
+G+ + FVY RE W L + + W + GDFN+I EK+GGK
Sbjct: 93 IIDGN--RVFITFVYGDPVVQYRELVWKRLTRIGIVRSEPWFMIGDFNEIIGNHEKRGGK 150
Query: 61 ERTSSTFWPVNRFIDDLNMM 2
+R+ S+F P I++ M+
Sbjct: 151 KRSESSFLPFCCMIENCGMI 170
>emb|CAN82094.1| hypothetical protein VITISV_031210 [Vitis vinifera]
Length = 1501
Score = 63.5 bits (153), Expect = 3e-08
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Frame = -3
Query: 406 KKSAFVQTVCRNLRLGDC--WKYVNPIGTKGGMLVGW-RNSVNVIRVHSCQFCMEIQFKR 236
K + V R+L G W+ +N +GT GG+L+ W + S+ ++ V QF + +F+
Sbjct: 556 KMQVMXEEVVRSLGSGRFLDWRVLNAMGTAGGVLICWDKRSLEILGVEEXQFSISCRFRN 615
Query: 235 EGDPKEYWAIFVYASNDCHIRESQWMYLRNSKVKWGKYWILGGDFNDIRNIGEKKGGKER 56
GD + VY RE W L K W + W LGGDFN I E + R
Sbjct: 616 VGDGGIWVFTGVYGXFSREERECLWEELGAIKGSWEEPWCLGGDFNTILYQAE-RSRNGR 674
Query: 55 TSSTFWPVNRFIDDLNMM 2
+S + IDDL ++
Sbjct: 675 ITSAMRRFAQIIDDLGLV 692
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Frame = -3
Query: 421 ICETKKKSAFVQTVCRNLRLGDCW------KYVNPIGTKGGMLVGWRNSVNVIRVHSCQF 260
+ ETK FV V CW V P G GG+ + W++ + + +++ +
Sbjct: 33 LMETKNSQDFVYKVF-------CWLGYDFIHTVEPEGRSGGLAIFWKSHLEIEFLYADKN 85
Query: 259 CMEIQFKREGDPKEYWAIFVYASNDCHIRESQWMYLRNSKVKWGKYWILGGDFNDIRNIG 80
M++Q K ++ VY H+R W +L + +K + W L GDFNDIR+
Sbjct: 86 LMDLQVSSRN--KVWFISCVYGLPVTHMRPKLWEHLNSIGLKRAEAWCLIGDFNDIRSND 143
Query: 79 EKKGGKERTSSTF 41
EK GG R+ S+F
Sbjct: 144 EKLGGPRRSPSSF 156
>ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304768 [Fragaria vesca
subsp. vesca]
Length = 1687
Score = 59.3 bits (142), Expect = 5e-07
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = -3
Query: 421 ICETKKKSAFVQTVCRNLRLGDCWKYVNPIG-TKGGMLVGWRNSVNVIRVHSCQFCMEIQ 245
+ ETKKK + +C +L C V +G + GG+ + W+N + V V S Q +++
Sbjct: 34 LMETKKKKQEMANICFDLGFEGC-SVVGKVGFSSGGLAMCWKNKMEVRPVGSSQGHIDVA 92
Query: 244 FKREGDPKEYWAIFVYASNDCHIRESQWMYLRNSKVKWGKYWILGGDFNDIRNIGEKKGG 65
+G Y + D +R W LR WI+ GDFN++ IG+K+GG
Sbjct: 93 VLFKGQVIRVTGF--YGNPDSQLRHFSWDLLRRIAKSVRGPWIVFGDFNELLCIGDKRGG 150
Query: 64 KERTSSTFWPVNRFIDDLNM 5
ER + +D+ +
Sbjct: 151 GERPEAQIRRFREAVDECGL 170
>emb|CAN76301.1| hypothetical protein VITISV_004811 [Vitis vinifera]
Length = 1044
Score = 59.3 bits (142), Expect = 5e-07
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Frame = -3
Query: 352 WKYVNPIGTKGGMLVGW-RNSVNVIRVHSCQFCMEIQFKREGDPKEYWAIFVYASNDCHI 176
WK +N GT GG+++ W + S+ ++ V QF + +F+ EGD + VY
Sbjct: 796 WKVLNAKGTAGGVIICWDKRSLEILGVEEGQFSISCRFRNEGDGAIWVFTGVYGPFSRED 855
Query: 175 RESQWMYLRNSKVKWGKYWILGGDFNDIRNIGEKKGGKERTSSTFWPVNRFIDDLNMM 2
RE W L + W + W LGGDFN I + + R +S + ID+L ++
Sbjct: 856 REGLWEELGAIRGLWEEPWCLGGDFNITLYI-DDRNRTXRITSAMRRFAQIIDELGLV 912
>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
Arabidopsis thaliana retrotransposon Ta11-1
gi|976278|gb|AAA75254.1| reverse transcriptase
[Arabidopsis thaliana]
Length = 1333
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/114 (27%), Positives = 57/114 (50%)
Frame = -3
Query: 343 VNPIGTKGGMLVGWRNSVNVIRVHSCQFCMEIQFKREGDPKEYWAIFVYASNDCHIRESQ 164
VNPIG GG+ + W+ V+++ ++ + ++ Q + E++ VY + +
Sbjct: 61 VNPIGLSGGLALFWKKGVDIVIKYADKNLIDFQI--QFGSHEFYVSCVYGNPAFSDKHLV 118
Query: 163 WMYLRNSKVKWGKYWILGGDFNDIRNIGEKKGGKERTSSTFWPVNRFIDDLNMM 2
W + + + W + GDFN I + GEK+GG R S+F P +D +M+
Sbjct: 119 WEKITRIGINRKEPWCMLGDFNPILHNGEKRGGPRRGDSSFLPFTDMLDSCDML 172
>ref|XP_002280533.2| PREDICTED: uncharacterized protein LOC100266246 [Vitis vinifera]
Length = 2234
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Frame = -3
Query: 352 WKYVNPIGTKGGMLVGW-RNSVNVIRVHSCQFCMEIQFKREGDPKEYWAIFVYASNDCHI 176
WK +N GT GG+++ W + S+ ++ V QF + +F+ EGD + VY
Sbjct: 60 WKVLNAKGTAGGVIICWDKRSLEILGVEEGQFSISCRFRNEGDGAIWVFTGVYGPFSRED 119
Query: 175 RESQWMYLRNSKVKWGKYWILGGDFNDIRNIGEKKGGKERTSSTFWPVNRFIDDLNMM 2
RE W L + W + W LGGDFN I + + R +S + ID+L ++
Sbjct: 120 REGLWEELGAIRGLWEEPWCLGGDFNITLYI-DDRNRTGRITSAMRRFAQIIDELGLV 176
>emb|CAN74335.1| hypothetical protein VITISV_010831 [Vitis vinifera]
Length = 644
Score = 58.5 bits (140), Expect = 9e-07
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Frame = -3
Query: 406 KKSAFVQTVCRNLRLGDC--WKYVNPIGTKGGMLVGW-RNSVNVIRVHSCQFCMEIQFKR 236
K + V R+L LG W+ +N +GT GG+L+ W + + ++ V QF + +F+
Sbjct: 167 KMQVMSEEVVRSLGLGRFLDWRVLNAMGTAGGVLIYWDKRLLEILGVEEGQFSISCRFRN 226
Query: 235 EGDPKEYWAIFVYASNDCHIRESQWMYLRNSKVKWGKYWILGGDFNDIRNIGEKKGGKER 56
GD + + VY RE W + W + W LGGDF+ I E + R
Sbjct: 227 VGDEGIWVFMGVYGPFSREERECLWEVFGAIRGLWEEPWCLGGDFHTILYQSE-RSRNGR 285
Query: 55 TSSTFWPVNRFIDDLNMM 2
+S + IDDL ++
Sbjct: 286 ITSAMRRFAQIIDDLRLV 303
>ref|XP_004301926.1| PREDICTED: uncharacterized protein LOC101300737 [Fragaria vesca
subsp. vesca]
Length = 193
Score = 57.8 bits (138), Expect = 1e-06
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Frame = -3
Query: 421 ICETKKKSAFVQTVCRNLRLGDCWKYVNPIG-TKGGMLVGWRNSVNVIRVHSCQFCMEIQ 245
+ ETKK A + +C +L G C V +G + GG+ + WR + V + S ++++
Sbjct: 34 LMETKKSKAEMTDICYDLGFGGCC-VVGKVGRSSGGLAMFWRKGLAVRPLGSSMGHIDVE 92
Query: 244 FKREGDPKEYWAIFVYASNDCHIRESQWMYLRNSKVKWGKYWILGGDFNDIRNIGEKKGG 65
+ + Y + + R + W LR WI GDFN++R+ EKKGG
Sbjct: 93 VQLDSGLVRISGF--YGNPETSNRWASWELLRRIAASVEGPWITFGDFNELRDANEKKGG 150
Query: 64 KERTSSTFWPVNRFIDDLNM 5
+R S IDD +
Sbjct: 151 SDRIESQMQKFVEAIDDYGL 170
>emb|CAN66495.1| hypothetical protein VITISV_034388 [Vitis vinifera]
Length = 869
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = -3
Query: 352 WKYVNPIGTKGGMLVGW-RNSVNVIRVHSCQFCMEIQFKREGDPKEYWAIFVYASNDCHI 176
WK +N +GT GG+L+ W + S+ ++ V QF + +F+ EGD + VY
Sbjct: 654 WKVLNAMGTAGGILICWDKRSLEMLGVEEGQFSISCRFRNEGDGAIWVFTGVYGPFSRED 713
Query: 175 RESQWMYLRNSKVKWGKYWILGGDFN 98
+E W L + W + W LGGDFN
Sbjct: 714 KECLWEELGAIRGLWEEPWCLGGDFN 739
>emb|CAN77480.1| hypothetical protein VITISV_021632 [Vitis vinifera]
Length = 2706
Score = 57.4 bits (137), Expect = 2e-06
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Frame = -3
Query: 352 WKYVNPIGTKGGMLVGW-RNSVNVIRVHSCQFCMEIQFKREGDPKEYWAIFVYASNDCHI 176
WK +N GT GG+++ W + S+ ++ V QF + +F+ EGD + VY
Sbjct: 1240 WKVLNAKGTAGGVIICWDKRSLEILGVEEGQFSISCRFRNEGDGAIWVFTGVYGPFSREB 1299
Query: 175 RESQWMYLRNSKVKWGKYWILGGDFNDIRNIGEKKGGKERTSSTFWPVNRFIDDLNMM 2
RE W L W + W LGGDFN I + + R +S + ID+L ++
Sbjct: 1300 REGLWEELGAIXGLWEEPWCLGGDFN-ITLYLDDRNRTGRITSAMRRFAQIIDELGLV 1356
>emb|CAN70941.1| hypothetical protein VITISV_002864 [Vitis vinifera]
Length = 1298
Score = 56.6 bits (135), Expect = 3e-06
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Frame = -3
Query: 415 ETKKKSAFVQT--------VCRNLRLGDC--WKYVNPIGTKGGMLVGW-RNSVNVIRVHS 269
+TKKK +T V R+L G W+ +N +GT G+L+ W + S+ ++
Sbjct: 783 DTKKKGPTQETKIQVMTKGVVRSLGPGRFLDWRVLNAMGTARGVLICWDKRSLEILNWEE 842
Query: 268 CQFCMEIQFKREGDPKEYWAIFVYASNDCHIRESQWMYLRNSKVKWGKYWILGGDFNDIR 89
QF + +F+ GD + VY RES W + + W + W LGGDFN I
Sbjct: 843 GQFSISCRFRNVGDGGIWVFTGVYGPFSREERESLWEEIGAIRGLWEEPWCLGGDFNTIL 902
Query: 88 NIGEKKGGKERTSSTFWPVNRF---IDDLNMM 2
E+ TS+ + RF IDDL ++
Sbjct: 903 YHSERSRNGXITSA----MRRFAQIIDDLGLV 930
>gb|EMJ15703.1| hypothetical protein PRUPE_ppa016706mg, partial [Prunus persica]
Length = 992
Score = 55.8 bits (133), Expect = 6e-06
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Frame = -3
Query: 352 WKYVNPIGTKGGMLVGWRN---SVNVIRVHSCQFCMEIQFKREGDPKEYWAIFVYASNDC 182
W Y G GG++V W + S++ + + I EGD +W +Y C
Sbjct: 4 WVYAPSRGRSGGIVVMWNSQTISISDFEIGEFSVSIRILDASEGD---WWLSCIYGP--C 58
Query: 181 HIRESQ--WMYLRNSKVKWGKYWILGGDFNDIRNIGEKKGGKERTSSTFWPVNRFIDDLN 8
H R+ + W L G W +GGDFN +R + EK G TSS N FIDD N
Sbjct: 59 HPRDRRRFWEELAGLFGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSS-MKNFNDFIDDTN 117
Query: 7 M 5
+
Sbjct: 118 L 118
>emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]
Length = 2095
Score = 55.1 bits (131), Expect = 1e-05
Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Frame = -3
Query: 415 ETKKKSAFVQTVCRNLRLGD--CWKYVNPIGTKGGMLVGWRNSV-NVIRVHSCQFCMEIQ 245
ETK K V R+L +G W+ +N G GG+LV W N V +++ V F +
Sbjct: 941 ETKIKDMSTGIV-RSLGVGRHIXWRAINSKGAAGGVLVFWDNRVVDLLEVEEGIFSVSCL 999
Query: 244 FKREGDPKEYWAIFVYASNDCHIRESQWMYLRNSKVKWGKYWILGGDFNDIRNIGEKKGG 65
FK D + VY RE W L + K W W +GGDFN IR E+ G
Sbjct: 1000 FKNXMDGMRWVFTGVYGPVXRRDREVFWEELGSIKGLWRDPWCVGGDFNMIRYPEERSRG 1059
Query: 64 KERTSS 47
E ++S
Sbjct: 1060 GELSAS 1065