BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00025238
         (743 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   120   5e-25
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...   105   1e-20
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...   105   1e-20
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...   105   2e-20
gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [...   101   3e-19
ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein A...   100   4e-19
gb|EMJ25879.1| hypothetical protein PRUPE_ppa025799mg [Prunus pe...   100   5e-19
ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thalia...   100   9e-19
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   100   9e-19
ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616...    99   1e-18
gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [...    99   1e-18
ref|XP_006405618.1| hypothetical protein EUTSA_v10028075mg [Eutr...    98   3e-18
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...    98   3e-18
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...    98   3e-18
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...    98   3e-18
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo...    98   3e-18
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    98   3e-18
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    98   3e-18
ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein A...    97   4e-18
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    97   7e-18

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  120 bits (301), Expect = 5e-25
 Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 1/209 (0%)
 Frame = +2

Query: 2    PSEAVLILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQ-E 178
            P E+  I +IP+     PD++ WM+S NG+F+V+S Y        L  D   G   S+  
Sbjct: 992  PWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAY-----YHELLEDRKTGPSTSRGP 1046

Query: 179  SCNVWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLF 358
            +  +W+  WK +I  KVK F W+  HN +    N+ KRGM +D  C  CGE +E+ +HL 
Sbjct: 1047 NLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLI 1106

Query: 359  FHCEKAKLVWKLAPISWNDVSSQSISFKKWWCKISSTHTKDFWQERMQLTSYLLWWLWKI 538
            + C+++   W ++P+  +  + ++ SF+ W   +  TH    W     L   + W +W  
Sbjct: 1107 WGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKDTEW---WALFWMICWNIWLG 1163

Query: 539  RNLCLFEGARFSAKDIVDKATAEWIEFSD 625
            RN  +FE  + + +++V++A    +EF +
Sbjct: 1164 RNKWVFEKKKLAFQEVVERAVRGVMEFEE 1192


>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score =  105 bits (263), Expect = 1e-20
 Identities = 64/186 (34%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
 Frame = +2

Query: 2   PSEAVLILKIPLLHVGAPDRFHWMLSNNGKFSVQSTY-----GALVKLWRLEADNPEGSF 166
           P +  +I  IP+ H+   D   W     G FSV+S Y     G L +  R  A    GS 
Sbjct: 220 PEDVNMIRTIPV-HIEMDDMLAWHYDEKGLFSVKSAYKVQRDGELQRRKRGSAGLSNGST 278

Query: 167 DSQESCNVWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESV 346
           + +     W+  WKMQ+ GKVKHF+WR  HNI+    NL +RGM +D +C +C   +E  
Sbjct: 279 EREM---YWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDA 335

Query: 347 DHLFFHCEKAKLVWKLAPISWNDVSSQSISFKKWWCKISSTHTKDFWQERMQLTSYLLWW 526
            HLFF C+K K VW+   +   ++  Q ++ K+   ++  T      +E + L S  LW 
Sbjct: 336 GHLFFKCKKVKKVWQENNL---EILRQELAEKRSGREVMETVFNRPAKE-ILLASITLWQ 391

Query: 527 LWKIRN 544
            W  RN
Sbjct: 392 WWSERN 397


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
            gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
            Japonica Group]
          Length = 1453

 Score =  105 bits (263), Expect = 1e-20
 Identities = 64/186 (34%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
 Frame = +2

Query: 2    PSEAVLILKIPLLHVGAPDRFHWMLSNNGKFSVQSTY-----GALVKLWRLEADNPEGSF 166
            P +  +I  IP+ H+   D   W     G FSV+S Y     G L +  R  A    GS 
Sbjct: 1113 PEDVNMIRTIPV-HIEMDDMLAWHYDEKGLFSVKSAYKVQRDGELQRRKRGSAGLSNGST 1171

Query: 167  DSQESCNVWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESV 346
            + +     W+  WKMQ+ GKVKHF+WR  HNI+    NL +RGM +D +C +C   +E  
Sbjct: 1172 EREM---YWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDA 1228

Query: 347  DHLFFHCEKAKLVWKLAPISWNDVSSQSISFKKWWCKISSTHTKDFWQERMQLTSYLLWW 526
             HLFF C+K K VW+   +   ++  Q ++ K+   ++  T      +E + L S  LW 
Sbjct: 1229 GHLFFKCKKVKKVWQENNL---EILRQELAEKRSGREVMETVFNRPAKE-ILLASITLWQ 1284

Query: 527  LWKIRN 544
             W  RN
Sbjct: 1285 WWSERN 1290


>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 773

 Score =  105 bits (262), Expect = 2e-20
 Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 2/198 (1%)
 Frame = +2

Query: 47   GAPDRFHWMLSNNGKFSVQSTYGALVKLWRLE-ADNPEGSFDSQESCNVWRGTWKMQIKG 223
            GA D   W+ +++G +SV+S Y  L KL + + A  P  +  S ++  V+   WK     
Sbjct: 451  GANDAITWIYTHDGNYSVKSGYHLLRKLSQQQHASLPSPNEVSAQT--VFTNIWKQNAPP 508

Query: 224  KVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFFHCEKAKLVWKLAPI 403
            K+KHF WR  HN +PT+ NL +R +  D  C+ CGE  E V+HL F C  +K +W+ A I
Sbjct: 509  KIKHFWWRSAHNALPTAGNLKRRRLITDDTCQRCGEASEDVNHLLFQCRVSKEIWEQAHI 568

Query: 404  SWNDVSS-QSISFKKWWCKISSTHTKDFWQERMQLTSYLLWWLWKIRNLCLFEGARFSAK 580
                  S  S SF +    I   +     ++ + L  ++ W +WK+RN  +F   R+S  
Sbjct: 569  KLCPGDSLMSNSFNQNLESIQKLNQSA--RKDVSLFPFIGWRIWKMRNDLIFNNKRWSIP 626

Query: 581  DIVDKATAEWIEFSDVYN 634
            D + KA  +  ++ +  N
Sbjct: 627  DSIQKALIDQQQWKESLN 644


>gb|EMJ08972.1| hypothetical protein PRUPE_ppa026368mg, partial [Prunus persica]
          Length = 1060

 Score =  101 bits (251), Expect = 3e-19
 Identities = 69/213 (32%), Positives = 100/213 (46%), Gaps = 4/213 (1%)
 Frame = +2

Query: 8    EAVLILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQESCN 187
            E   IL+IPL  +   D   W    NG +SV+S Y    +L  LE D   G   ++   N
Sbjct: 686  EVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGY----RLAGLEKDKMSGEPSARVDLN 741

Query: 188  --VWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFF 361
               W+  W ++I  K+K FLWR   + +P    L  R +   P C  C    ESV H  +
Sbjct: 742  SKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVW 801

Query: 362  HCEKAKLVWKLAPISWNDVSS--QSISFKKWWCKISSTHTKDFWQERMQLTSYLLWWLWK 535
             CE AK VW+ +  +W +V    +  SF++ W  +  + +     E   L +YL W LW 
Sbjct: 802  LCEAAKEVWRNS--AWGNVCEVWRVNSFRELWHALQLSSS----GEEQGLFAYLCWGLWN 855

Query: 536  IRNLCLFEGARFSAKDIVDKATAEWIEFSDVYN 634
             RN  +FEG   +A  ++ + T    EFSD  N
Sbjct: 856  RRNSFIFEGKSETAIQLLSRMTKLAQEFSDANN 888


>ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 968

 Score =  100 bits (250), Expect = 4e-19
 Identities = 67/214 (31%), Positives = 96/214 (44%), Gaps = 5/214 (2%)
 Frame = +2

Query: 2    PSEAVLILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFD-SQE 178
            P +   IL +PL      D   W  S++G+FSV+S Y   +++ RLE  +  GS   +  
Sbjct: 577  PVDVEKILAVPLCDGNGGDVAVWHFSDDGRFSVKSGYWFGMEMKRLEKGSSSGSGHVNSN 636

Query: 179  SCNVWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLF 358
            S N+W   W + +  KVK FLWR  H  +P  + L KR +     C  CGE +E+V H  
Sbjct: 637  SINIWSLIWDLLVPNKVKLFLWRACHAFLPCVERLFKRNICSHSGCGRCGEGEETVVHSL 696

Query: 359  FHCEKAKLVWKLAPISWNDVSSQSISFKKW----WCKISSTHTKDFWQERMQLTSYLLWW 526
              C  AK VWK     W  V      +K W    +  +      +   +  +L + + WW
Sbjct: 697  CWCRVAKKVWKCT--YWRGV------YKSWQISSFADLFGLVAMEGNIKNTELFALICWW 748

Query: 527  LWKIRNLCLFEGARFSAKDIVDKATAEWIEFSDV 628
            LWK RN           + IV+K      EFS V
Sbjct: 749  LWKDRNEVFHGKKGLEPRQIVEKCLEWQREFSGV 782


>gb|EMJ25879.1| hypothetical protein PRUPE_ppa025799mg [Prunus persica]
          Length = 867

 Score =  100 bits (249), Expect = 5e-19
 Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 2/206 (0%)
 Frame = +2

Query: 8    EAVLILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQESCN 187
            E   IL+IPL  +   D+       +GK+SV+S Y  +V   + + +N      +Q+   
Sbjct: 637  EVKAILQIPLASIHREDKLICHYDRSGKYSVKSGY--MVACMKKQRENGMEGSSTQDGTL 694

Query: 188  VWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFFHC 367
            +W+  W++Q+  K+K FLWR     +P+  NL  R +   P C  CG+  ES++H  + C
Sbjct: 695  LWKKLWRLQVLNKIKFFLWRCIWGFLPSRQNLYHRKILNSPICPRCGKKVESINHAIWAC 754

Query: 368  EKA--KLVWKLAPISWNDVSSQSISFKKWWCKISSTHTKDFWQERMQLTSYLLWWLWKIR 541
             ++  +  W++             SFK+ W  +    +K    E + L ++L W +W  R
Sbjct: 755  NESANRHEWRIT------------SFKELWQSVIVVSSK----EEVDLFAFLCWDIWNDR 798

Query: 542  NLCLFEGARFSAKDIVDKATAEWIEF 619
            N  LF+G    +  + +KA A  IEF
Sbjct: 799  NNLLFQGRGLESVSVFNKALAYQIEF 824


>ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thaliana]
           gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
           thaliana] gi|7269807|emb|CAB79667.1| putative protein
           [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
           putative reverse transcriptase/RNA-dependent DNA
           polymerase [Arabidopsis thaliana]
           gi|332660185|gb|AEE85585.1| ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 575

 Score = 99.8 bits (247), Expect = 9e-19
 Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 2/183 (1%)
 Frame = +2

Query: 56  DRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQESCNVWRGTWKMQIKGKVKH 235
           D + W  +++G ++V+S Y  L ++    +   E S  S     +++  WK Q   K++H
Sbjct: 211 DSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNP--IYQKIWKSQTSPKIQH 268

Query: 236 FLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFFHCEKAKLVWKLA--PISW 409
           FLW+   N +P +  L+ R +  +  C  C    E+V+HL F C  A+L W ++  PI  
Sbjct: 269 FLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPL 328

Query: 410 NDVSSQSISFKKWWCKISSTHTKDFWQERMQLTSYLLWWLWKIRNLCLFEGARFSAKDIV 589
               + SI    +W   +  +    W++  QL  +LLW LWK RN  +F G  F+A++++
Sbjct: 329 GGEWADSIYVNLYWV-FNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVL 387

Query: 590 DKA 598
            +A
Sbjct: 388 RRA 390


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 99.8 bits (247), Expect = 9e-19
 Identities = 56/186 (30%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
 Frame = +2

Query: 56   DRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQESCN-VWRGTWKMQIKGKVK 232
            DRF W  S +G +SV+S Y  + ++   + +NP+     Q S + +++  WK+ +  K+ 
Sbjct: 1008 DRFTWEYSRSGHYSVKSGYWVMTEIIN-QRNNPQEVL--QPSLDPIFQQIWKLDVPPKIH 1064

Query: 233  HFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFFHCEKAKLVWKLAPISWN 412
            HFLWR  +N +  + NL+ R +  +  C  C    E+V+HL F C  A+L W ++P+   
Sbjct: 1065 HFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPLPAP 1124

Query: 413  DVSSQSISFKKWWCKISSTH-TKDFWQERMQLTSYLLWWLWKIRNLCLFEGARFSAKDIV 589
                 + S  +    + S H ++    +   L  ++LW LWK RN  +F+G  F+A  ++
Sbjct: 1125 PGGEWAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLVFKGREFTAPQVI 1184

Query: 590  DKATAE 607
             KAT +
Sbjct: 1185 LKATED 1190


>ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616098 [Citrus sinensis]
          Length = 510

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 57/197 (28%), Positives = 94/197 (47%)
 Frame = +2

Query: 8   EAVLILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQESCN 187
           +  LI +IPL      D ++W  ++ G F+V+S Y  L  L                S N
Sbjct: 147 DQALITQIPLSSRRDDDAWYWSANSRGLFTVRSCYKILAYL------------SEPPSSN 194

Query: 188 VWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFFHC 367
           VW+  WK+++  KVKHF+W    N++PT+DNL +  ++V   C +C  +DE V H   +C
Sbjct: 195 VWQKVWKLKVPAKVKHFIWCAVVNVLPTADNLRRCQVEVPSVCPICNAYDEIVAHCLVNC 254

Query: 368 EKAKLVWKLAPISWNDVSSQSISFKKWWCKISSTHTKDFWQERMQLTSYLLWWLWKIRNL 547
             AK  W L+PI +        +F  W   I S ++ D       L +   W LW+ +N 
Sbjct: 255 SFAKSCWLLSPIGY---VGGCENFMDWLEGIFSRYSSD----DCDLAAMTCWSLWENKNA 307

Query: 548 CLFEGARFSAKDIVDKA 598
            +++  +     +++ A
Sbjct: 308 KVWKNRKGRLSSVLNLA 324


>gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
          Length = 509

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 3/203 (1%)
 Frame = +2

Query: 20  ILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQESCNVWRG 199
           IL +P+     PDR+ W  ++NG++SV+S               P+ S     S  VW+G
Sbjct: 193 ILSLPIGISSLPDRWIWPWTSNGEYSVKSGI----------VGPPQTSH--VVSTQVWKG 240

Query: 200 TWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFFHCEKAK 379
            WK++   K+K F WR+  N I T  NL KR +   P C +C   +ESV+HLF  C    
Sbjct: 241 LWKLKSLPKIKFFCWRILSNAIATKLNLFKRKISQSPMCPVCENNEESVEHLFLLCPWTA 300

Query: 380 LVWKLAPISWNDVSSQSI-SFKKWWCKISSTHTKDFWQER--MQLTSYLLWWLWKIRNLC 550
            VW  +P+++  V +QSI +F  W   +   +          M + S++LW +WK R   
Sbjct: 301 AVWFGSPLNYR-VHNQSITTFDNWLNSMFQLNLTSILDRNRLMTIISFILWEIWKARCKF 359

Query: 551 LFEGARFSAKDIVDKATAEWIEF 619
           + EG +     ++ +A     EF
Sbjct: 360 VIEGRQLHPIHVLHQAMRAANEF 382


>ref|XP_006405618.1| hypothetical protein EUTSA_v10028075mg [Eutrema salsugineum]
           gi|557106756|gb|ESQ47071.1| hypothetical protein
           EUTSA_v10028075mg [Eutrema salsugineum]
          Length = 343

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 60/196 (30%), Positives = 90/196 (45%)
 Frame = +2

Query: 20  ILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQESCNVWRG 199
           I ++PL      DR  W+   NGK+SV+S YG  V          E   + Q + N  + 
Sbjct: 13  IRRLPLSSSRPSDRLVWLPQKNGKYSVRSGYGLSVS---------ETIPERQRNFNWQKN 63

Query: 200 TWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFFHCEKAK 379
            WK+Q   KVK FLWR      P    L +RG++VD  CK+CG   E++ H+   C+ A+
Sbjct: 64  IWKLQTVPKVKQFLWRAVVEAFPVGVELVRRGIQVDFACKICGN-PETITHVLRDCQLAR 122

Query: 380 LVWKLAPISWNDVSSQSISFKKWWCKISSTHTKDFWQERMQLTSYLLWWLWKIRNLCLFE 559
            VW LAP+      +  +        +S             L +++ W LW  RN  +F 
Sbjct: 123 KVWNLAPLRTQSHLNTVLCLDFLAHILSMVSLPPIEVSTTSLPAWICWNLWTPRNHRIFS 182

Query: 560 GARFSAKDIVDKATAE 607
              +SA +I+ KA  +
Sbjct: 183 DTTYSAYEIITKAICD 198


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Citrus sinensis]
          Length = 765

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 56/187 (29%), Positives = 89/187 (47%)
 Frame = +2

Query: 8   EAVLILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQESCN 187
           +A  ILKIPL    +PD+  W     G +SV+S Y        L+   P     S+E  N
Sbjct: 394 DAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLA-----LQMKFPNRPSSSKEDNN 448

Query: 188 VWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFFHC 367
            W   W +QI  KVK F+WR  ++++PTS+NL KR +   P C+ C    E++ H  F C
Sbjct: 449 SWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDC 508

Query: 368 EKAKLVWKLAPISWNDVSSQSISFKKWWCKISSTHTKDFWQERMQLTSYLLWWLWKIRNL 547
           + ++ +WKL        + +          ++   +K      M+L   + W +W  RNL
Sbjct: 509 KASRKIWKLTTFEEEVKALKCKDVLSLLLALADRRSK----TEMELIVAVCWSIWHSRNL 564

Query: 548 CLFEGAR 568
            +F+  +
Sbjct: 565 FIFQNKK 571


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 56/187 (29%), Positives = 89/187 (47%)
 Frame = +2

Query: 8    EAVLILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQESCN 187
            +A  ILKIPL    +PD+  W     G +SV+S Y        L+   P     S+E  N
Sbjct: 597  DAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLA-----LQMKFPNRPSSSKEDNN 651

Query: 188  VWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFFHC 367
             W   W +QI  KVK F+WR  ++++PTS+NL KR +   P C+ C    E++ H  F C
Sbjct: 652  SWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDC 711

Query: 368  EKAKLVWKLAPISWNDVSSQSISFKKWWCKISSTHTKDFWQERMQLTSYLLWWLWKIRNL 547
            + ++ +WKL        + +          ++   +K      M+L   + W +W  RNL
Sbjct: 712  KASRKIWKLTTFEEEVKALKCKDVLSLLLALADRRSK----TEMELIVAVCWSIWHSRNL 767

Query: 548  CLFEGAR 568
             +F+  +
Sbjct: 768  FIFQNKK 774


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 769

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 56/187 (29%), Positives = 89/187 (47%)
 Frame = +2

Query: 8   EAVLILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQESCN 187
           +A  ILKIPL    +PD+  W     G +SV+S Y        L+   P     S+E  N
Sbjct: 394 DAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLA-----LQMKFPNRPSSSKEDNN 448

Query: 188 VWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFFHC 367
            W   W +QI  KVK F+WR  ++++PTS+NL KR +   P C+ C    E++ H  F C
Sbjct: 449 SWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDC 508

Query: 368 EKAKLVWKLAPISWNDVSSQSISFKKWWCKISSTHTKDFWQERMQLTSYLLWWLWKIRNL 547
           + ++ +WKL        + +          ++   +K      M+L   + W +W  RNL
Sbjct: 509 KASRKIWKLTTFEEEVKALKCKDVLSLLLALADRRSK----TEMELIVAVCWSIWHSRNL 564

Query: 548 CLFEGAR 568
            +F+  +
Sbjct: 565 FIFQNKK 571


>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
          Length = 639

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 60/184 (32%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
 Frame = +2

Query: 8   EAVLILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQESCN 187
           E V  +K   +HV   D   W     G F+V+S Y    ++ R  + N      + ES +
Sbjct: 179 EDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGD 238

Query: 188 --VWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFF 361
              W+  WK+ + GK+KHFLWR+ HN +    NL  RGM VD +C +CG ++E   HLFF
Sbjct: 239 DDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFF 298

Query: 362 HCEKAKLVWKLAPI-SWNDVSSQSISFKKWWCKISSTHTKDFWQERMQLTSYL--LWWLW 532
            C+  K VW+   +     +  Q  S K     I       + +  ++ TS +  LW  W
Sbjct: 299 KCKPVKKVWQALNLEELRSMLEQQTSGKNVLQSI-------YCRPEIERTSAIVCLWQWW 351

Query: 533 KIRN 544
           K RN
Sbjct: 352 KERN 355


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 60/184 (32%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
 Frame = +2

Query: 8    EAVLILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQESCN 187
            E V  +K   +HV   D   W     G F+V+S Y    ++ R  + N      + ES +
Sbjct: 1212 EDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGD 1271

Query: 188  --VWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFF 361
               W+  WK+ + GK+KHFLWR+ HN +    NL  RGM VD +C +CG ++E   HLFF
Sbjct: 1272 DDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFF 1331

Query: 362  HCEKAKLVWKLAPI-SWNDVSSQSISFKKWWCKISSTHTKDFWQERMQLTSYL--LWWLW 532
             C+  K VW+   +     +  Q  S K     I       + +  ++ TS +  LW  W
Sbjct: 1332 KCKPVKKVWQALNLEELRSMLEQQTSGKNVLQSI-------YCRPEIERTSAIVCLWQWW 1384

Query: 533  KIRN 544
            K RN
Sbjct: 1385 KERN 1388


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 1/203 (0%)
 Frame = +2

Query: 2    PSEAVLILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQES 181
            PS+  LIL I        D F W  + +G ++V+S Y A   L R   D P   F     
Sbjct: 863  PSDIPLILGIRPSRTYKSDDFSWSFTKSGNYTVKSGYWAARDLSRPTCDLP---FQGPSV 919

Query: 182  CNVWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFF 361
              +    WK++   K KHF W+     + T+  L  R +  +  C  CG  +ES++HL F
Sbjct: 920  SALQAQVWKIKTTRKFKHFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLF 979

Query: 362  HCEKAKLVWKLAPISWND-VSSQSISFKKWWCKISSTHTKDFWQERMQLTSYLLWWLWKI 538
             C  ++ +W L+PI  ++ +  ++  F  +   +S     D  ++ M++  ++LW++WK 
Sbjct: 980  LCPPSRQIWALSPIPSSEYIFPRNSLFYNFDFLLSRGKEFDIAEDIMEIFPWILWYIWKS 1039

Query: 539  RNLCLFEGARFSAKDIVDKATAE 607
            RN  +FE    S + I+D A  E
Sbjct: 1040 RNRFIFENVIESPQVILDFAIQE 1062


>ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Setaria
            italica]
          Length = 950

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 57/187 (30%), Positives = 85/187 (45%), Gaps = 12/187 (6%)
 Frame = +2

Query: 20   ILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSF-----DSQESC 184
            IL IP+  +G  D   W     G FSV+S Y  LV   R +    +G       +     
Sbjct: 563  ILSIPV-RIGRDDVIAWHHDRKGMFSVRSAYHMLVDEERRQRKYQQGESSVCCREGDHET 621

Query: 185  NVWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFFH 364
              W+  WK+    KV+HF+WR+ HN +P   N+ +RG+ +D +C +C  FDE   H F  
Sbjct: 622  QKWKKLWKLPCPPKVRHFIWRLAHNSLPLKQNIKRRGVFLDTRCPVCMRFDEDGGHCFLK 681

Query: 365  CEKAKLVWKLAPISWNDVSSQSISFKKWWCKISSTHTKDFWQERMQL-------TSYLLW 523
            C+  K  W++  +    ++            +SS  +KDF    +QL        S LLW
Sbjct: 682  CKLIKRCWRILEMEQTRLA-----------LLSSKSSKDFVWNVLQLEQSLACKVSLLLW 730

Query: 524  WLWKIRN 544
              W +RN
Sbjct: 731  KWWDVRN 737


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 96.7 bits (239), Expect = 7e-18
 Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 8/187 (4%)
 Frame = +2

Query: 8    EAVLILKIPLLHVGAPDRFHWMLSNNGKFSVQSTYGALVKLWRLEADNPEGSFDSQESCN 187
            E V  +K   +HV   D   W     G F+V+S Y    ++ R  + N      + ES +
Sbjct: 1239 EDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGD 1298

Query: 188  --VWRGTWKMQIKGKVKHFLWRVFHNIIPTSDNLSKRGMKVDPKCKLCGEFDESVDHLFF 361
               W+  WK+ + GK+KHFLWR+ HN +    NL  RGM VD +C +CG ++E   HLFF
Sbjct: 1299 DDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFF 1358

Query: 362  HCEKAKLVW------KLAPISWNDVSSQSISFKKWWCKISSTHTKDFWQERMQLTSYLLW 523
             C+  K VW      +L  +     S +++  +  +C+  +  T              LW
Sbjct: 1359 KCKPVKKVWQALNLEELRSMLEQQTSGKNV-LQSIYCRPENERTS---------AIVCLW 1408

Query: 524  WLWKIRN 544
              WK RN
Sbjct: 1409 QWWKERN 1415