BLASTX nr result
ID: Rehmannia26_contig00025030
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00025030
(465 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617... 86 4e-23
ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625... 72 9e-22
ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein A... 61 8e-17
ref|XP_006480206.1| PREDICTED: uncharacterized protein LOC102628... 57 8e-17
ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616... 71 3e-16
ref|XP_002533006.1| RNA binding protein, putative [Ricinus commu... 55 3e-14
ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus c... 57 9e-14
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici... 54 1e-11
ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616... 63 1e-11
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ... 49 5e-11
gb|EMJ07683.1| hypothetical protein PRUPE_ppa019056mg, partial [... 57 8e-11
ref|XP_006489961.1| PREDICTED: uncharacterized protein LOC102608... 51 2e-10
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm... 47 5e-10
ref|XP_003598902.1| hypothetical protein MTR_3g023170 [Medicago ... 45 1e-09
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 51 2e-09
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu... 42 2e-08
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 48 2e-08
ref|NP_001175214.1| Os07g0501200 [Oryza sativa Japonica Group] g... 44 3e-08
ref|XP_003605496.1| hypothetical protein MTR_4g032310 [Medicago ... 56 3e-08
gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold ... 44 4e-08
>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
Length = 440
Score = 85.9 bits (211), Expect(2) = 4e-23
Identities = 42/94 (44%), Positives = 57/94 (60%)
Frame = -1
Query: 459 CNNEGESVAHILLTCSFANICWNSSLLSFRNEGFNDLLECLNSNWPNLSLEEKNLVVMML 280
C+ ES+ HILL C FA CW +S + F +G N LL L + + SLE+ L VM+
Sbjct: 167 CHASSESICHILLQCPFARTCWMTSSIGFFGDGSN-LLLWLEALFNRYSLEQTQLAVMIC 225
Query: 279 WALWKNRNDVLWKGIGKTSVGLLNFASSNLFQWE 178
W+LW+NRND++W+G LLN A LFQW+
Sbjct: 226 WSLWQNRNDMVWRGKTSGVQQLLNSAGHFLFQWQ 259
Score = 47.8 bits (112), Expect(2) = 4e-23
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = -3
Query: 130 GDTVWSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFIA 2
G W P G ++CNVD A+FA G IG+G ++RDSN F+A
Sbjct: 277 GAICWEPPVAGRLKCNVDVALFAFRGYIGFGNVIRDSNCAFMA 319
>ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625297 [Citrus sinensis]
Length = 412
Score = 72.0 bits (175), Expect(2) = 9e-22
Identities = 37/97 (38%), Positives = 52/97 (53%)
Frame = -1
Query: 462 VCNNEGESVAHILLTCSFANICWNSSLLSFRNEGFNDLLECLNSNWPNLSLEEKNLVVMM 283
VCN E+V H L+ CSFA CW SS + F N L+ L + S +E N +M+
Sbjct: 213 VCNAYEETVLHSLVACSFAKSCWTSSSVGFVGYCSN-FLDWLAHVFTRCSKDECNTAMMI 271
Query: 282 LWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQWEAA 172
W +W NRN+ +W + +LN A L+QW+AA
Sbjct: 272 CWRIWVNRNNKVWNNTTSSVCQILNSAGQFLYQWQAA 308
Score = 57.0 bits (136), Expect(2) = 9e-22
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = -3
Query: 163 EIKDGRFNVRDGDTVWSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFIA 2
++ D + G W +PK G ++CNVD A+F GKIG GC++R+S G F+A
Sbjct: 314 DVNDDTHRLVHGALCWEQPKFGWVKCNVDAAVFESQGKIGIGCVIRNSQGGFVA 367
>ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 459
Score = 61.2 bits (147), Expect(2) = 8e-17
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Frame = -1
Query: 462 VCNNEGESVAHILLTCSFANICWNSSLLSFRN--EGFNDLLECLNSNWPNLSLEEKNLVV 289
V N + E+V H+L+ C FA CW S + F F D L+ L N N E+ + V
Sbjct: 213 VGNFDKETVLHLLVDCPFARSCWIKSKVGFFGIYSSFKDWLQALFRNCTN---EQCWIAV 269
Query: 288 MMLWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQW 181
M+ W LW NRN+++W+G T+ ++N A W
Sbjct: 270 MVCWKLWCNRNNLVWQGKCDTTKQIVNAAGVGAVAW 305
Score = 51.2 bits (121), Expect(2) = 8e-17
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = -3
Query: 130 GDTVWSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFIA 2
G WS P+ G ++CN+D +FA G++G G ++RD +G F+A
Sbjct: 301 GAVAWSPPRVGWLKCNIDATVFANEGRVGLGSVIRDESGKFVA 343
>ref|XP_006480206.1| PREDICTED: uncharacterized protein LOC102628543 [Citrus sinensis]
Length = 163
Score = 57.4 bits (137), Expect(2) = 8e-17
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = -3
Query: 163 EIKDGRFNVRDGDTVWSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFIA 2
+I D + G W +PK G ++CNVD A+F GKIG GC++R+S G F+A
Sbjct: 90 DINDDTHKLVHGALCWEKPKFGWVKCNVDAAVFTPQGKIGIGCVIRNSQGGFLA 143
Score = 55.1 bits (131), Expect(2) = 8e-17
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = -1
Query: 414 SFANICWNSSLLSFRNEGF-NDLLECLNSNWPNLSLEEKNLVVMMLWALWKNRNDVLWKG 238
SFA CW SS + F G+ + L+ L + S +E N+ +M+ W +W NRN+ W
Sbjct: 5 SFAKSCWISSSVGF--VGYCSTFLDWLAHVFTRCSKDECNIAMMICWRIWVNRNNKAWNN 62
Query: 237 IGKTSVGLLNFASSNLFQWEAA 172
+ +LN A L+QW+AA
Sbjct: 63 TASSVCQILNSAGQFLYQWQAA 84
>ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616098 [Citrus sinensis]
Length = 510
Score = 71.2 bits (173), Expect(2) = 3e-16
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = -1
Query: 465 PVCNNEGESVAHILLTCSFANICWNSSLLSFRN--EGFNDLLECLNSNWPNLSLEEKNLV 292
P+CN E VAH L+ CSFA CW S + + E F D LE + S + S ++ +L
Sbjct: 238 PICNAYDEIVAHCLVNCSFAKSCWLLSPIGYVGGCENFMDWLEGIFSRY---SSDDCDLA 294
Query: 291 VMMLWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQWEA 175
M W+LW+N+N +WK +LN A LFQW++
Sbjct: 295 AMTCWSLWENKNAKVWKNRKGRLSSVLNLAGQVLFQWKS 333
Score = 39.3 bits (90), Expect(2) = 3e-16
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -3
Query: 130 GDTVWSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFI 5
G W RP +CNVD F +G I YG ++++S G F+
Sbjct: 350 GAVCWQRPCVWWFKCNVDATTFLSSGTIMYGAVIQNSEGEFV 391
>ref|XP_002533006.1| RNA binding protein, putative [Ricinus communis]
gi|223527217|gb|EEF29381.1| RNA binding protein,
putative [Ricinus communis]
Length = 197
Score = 54.7 bits (130), Expect(2) = 3e-14
Identities = 25/95 (26%), Positives = 46/95 (48%)
Frame = -1
Query: 465 PVCNNEGESVAHILLTCSFANICWNSSLLSFRNEGFNDLLECLNSNWPNLSLEEKNLVVM 286
P+C+ GES+ + L+ CSF W S+L R + + L + + +
Sbjct: 16 PLCSKPGESIYYALIDCSFVKEVWVISVLISRGNRNGSICDWLQEMFTKFEKSTWGCIAV 75
Query: 285 MLWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQW 181
++W LW +RN+V+W K +++ A + L +W
Sbjct: 76 LVWNLWIHRNEVVWYSKRKQPTQIVDGAVTYLHKW 110
Score = 49.3 bits (116), Expect(2) = 3e-14
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -3
Query: 118 WSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFI 5
W +PK G +CN+D AIF Q G IG C+LR++ G FI
Sbjct: 134 WKKPKTGWPKCNIDAAIFNQQGMIGADCVLRNTEGAFI 171
>ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus communis]
gi|223534693|gb|EEF36385.1| hypothetical protein
RCOM_0596960 [Ricinus communis]
Length = 270
Score = 57.0 bits (136), Expect(2) = 9e-14
Identities = 27/95 (28%), Positives = 47/95 (49%)
Frame = -1
Query: 465 PVCNNEGESVAHILLTCSFANICWNSSLLSFRNEGFNDLLECLNSNWPNLSLEEKNLVVM 286
P+C+N GES+ H L+ CSF W S+L R + + L + + +
Sbjct: 84 PLCSNPGESIYHALIDCSFVKEVWVISVLVSRGNRNGSICDWLQEIFTKFDKSTWHCIAA 143
Query: 285 MLWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQW 181
++W LW +RN+V+W K +++ A + L +W
Sbjct: 144 IVWNLWIHRNEVVWNSKRKQPRQIVDGAVTYLQRW 178
Score = 45.1 bits (105), Expect(2) = 9e-14
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = -3
Query: 118 WSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFI 5
W +PK G ++CNVD + F Q G IG G +LR++ G +
Sbjct: 202 WKKPKSGSLKCNVDASTFNQQGMIGAGYVLRNTEGALL 239
>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538337|gb|EEF39944.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 483
Score = 53.5 bits (127), Expect(2) = 1e-11
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = -1
Query: 465 PVCNNEGESVAHILLTCSFANICWNS-SLLSFRNEGFNDLLECLNSNWPNLSLEEKNLVV 289
P C ++ E++ HIL+ C W +L F ++ N LLE S + + V
Sbjct: 226 PCCVSQPETIMHILVLCDVTTQSWKYVNLYQFLSQVSN-LLEGARSVFEHFDDSIVASFV 284
Query: 288 MMLWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQWEAA 172
++ W+LW N NDV+W G + + + ASS LFQW A
Sbjct: 285 VLWWSLWTNMNDVVWNGKKLSWRAVASRASSFLFQWGKA 323
Score = 41.6 bits (96), Expect(2) = 1e-11
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = -3
Query: 130 GDTVWSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFI 5
GD +W +P G+ + NVD + A+ GK G +LRD+ G++I
Sbjct: 339 GDCLWQKPATGKYKLNVDASSSAERGKSGASFVLRDNAGIWI 380
>ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis]
Length = 977
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 33/97 (34%), Positives = 51/97 (52%)
Frame = -1
Query: 462 VCNNEGESVAHILLTCSFANICWNSSLLSFRNEGFNDLLECLNSNWPNLSLEEKNLVVMM 283
VC E+ H L+ C+ A CW SS + F ++ LE L+ + S EE ++ +M+
Sbjct: 842 VCLASDETALHSLVECNVAKACWISSSVGFVGHCYS-FLEWLDHIFTRCSKEECHVAMMI 900
Query: 282 LWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQWEAA 172
W +W NRND +W + +LN A L+QW+ A
Sbjct: 901 CWRVWINRNDKVWNNKTGSVNQVLNSAGQLLYQWQVA 937
Score = 31.6 bits (70), Expect(2) = 1e-11
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 130 GDTVWSRPKPGEIECNVDGAIFA 62
G W RPK G ++CNVD A+F+
Sbjct: 954 GAICWERPKFGWVKCNVDAAMFS 976
>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 393
Score = 48.9 bits (115), Expect(2) = 5e-11
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Frame = -1
Query: 459 CNNEGESVAHILLTCSFANICWNSS----LLSFRNEGFNDLLECLNSNWPNLSLEEKNLV 292
C + E HI C A WN++ L++ F++ + + + LS + +
Sbjct: 100 CEDPHEDCYHIFFHCRTAIDVWNTANVWHLIAPSLSQFDNAPDIIFNLLQKLSASQMESI 159
Query: 291 VMMLWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQWEAAH 169
V ++W++WK+RN LW+ + ++SV +L A L W A+
Sbjct: 160 VTIMWSIWKSRNLKLWQQVSESSVTILERAKHLLEGWRKAN 200
Score = 43.9 bits (102), Expect(2) = 5e-11
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -3
Query: 136 RDGDTVWSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNG 14
R G+ W +PK G ++CNVD + + K+G G +RDS G
Sbjct: 228 RYGNIRWRKPKSGRLKCNVDASFSTSSNKVGIGMCIRDSEG 268
>gb|EMJ07683.1| hypothetical protein PRUPE_ppa019056mg, partial [Prunus persica]
Length = 298
Score = 57.0 bits (136), Expect(2) = 8e-11
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Frame = -1
Query: 459 CNNEGESVAHILLTCSFANICWNSSLLSFRNEGFN--DLLECLNSNWPNLSLEEKNLVVM 286
C + ES H+L C FA WN SLL+ + + + L S +++ ++
Sbjct: 8 CGDITESALHVLAMCPFAVATWNISLLTRHAHQVHCHTMKDWLREMLEGTSKAQRDHIIT 67
Query: 285 MLWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQWEAAH*MRLKMGD 145
+LWA+W NRN +LW+G+ ++ ++ FA + ++ A+ K+ D
Sbjct: 68 LLWAIWGNRNALLWQGVQRSPHEVVGFAQQYVHEFITANDTPSKVTD 114
Score = 35.0 bits (79), Expect(2) = 8e-11
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3
Query: 118 WSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFIA 2
W+ P G ++ N DGA +G+ G + RD++G F+A
Sbjct: 122 WAAPPSGRLKFNFDGAFDPTSGRGAVGVVARDADGGFVA 160
>ref|XP_006489961.1| PREDICTED: uncharacterized protein LOC102608276 [Citrus sinensis]
Length = 190
Score = 51.2 bits (121), Expect(2) = 2e-10
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = -3
Query: 130 GDTVWSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFI 5
G W RP G ++CNVD A+F+ +G GC++R+S G+F+
Sbjct: 79 GAVCWKRPHVGWVKCNVDAAVFSSQAMVGLGCVVRNSEGIFL 120
Score = 39.7 bits (91), Expect(2) = 2e-10
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -1
Query: 315 SLEEKNLVVMMLWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQWEA 175
S E+ +L M+ W +W +RND +W +LN A L+QW++
Sbjct: 15 SKEDCDLAAMICWKIWAHRNDKVWNNRSGRVYQILNSAGHLLYQWQS 61
>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
gi|223541858|gb|EEF43404.1| conserved hypothetical
protein [Ricinus communis]
Length = 668
Score = 46.6 bits (109), Expect(2) = 5e-10
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = -3
Query: 118 WSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFI 5
W++P+ G ++ N D A+F + G+IG GC++RDSNG I
Sbjct: 588 WTKPELGWLKINTDTALFLKQGRIGLGCVVRDSNGRMI 625
Score = 42.7 bits (99), Expect(2) = 5e-10
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = -1
Query: 459 CNNEGESVAHILLTCSFANICWNSSLLSFRNEGFNDLLECLNSNW-PNLSLEEKN----L 295
CN E E++ H+L CS A CW+ LL FR F+ E +W N ++
Sbjct: 472 CNREPETLFHVLFGCSMARECWD--LLGFR---FSFPTESPICSWIQNFFIDNHEDTCAK 526
Query: 294 VVMMLWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQ 184
+ ++ +LW RN +W T+ G+++ A+ L Q
Sbjct: 527 MALVCGSLWNQRNHWVWNKQSNTTYGVISPANQLLEQ 563
>ref|XP_003598902.1| hypothetical protein MTR_3g023170 [Medicago truncatula]
gi|355487950|gb|AES69153.1| hypothetical protein
MTR_3g023170 [Medicago truncatula]
Length = 274
Score = 44.7 bits (104), Expect(2) = 1e-09
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -3
Query: 118 WSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFI 5
W +P PG +CNVD + K+G+G +RD+ G F+
Sbjct: 129 WEKPSPGRFKCNVDASFSTTLNKVGFGACIRDAEGNFV 166
Score = 43.5 bits (101), Expect(2) = 1e-09
Identities = 23/101 (22%), Positives = 47/101 (46%)
Frame = -1
Query: 462 VCNNEGESVAHILLTCSFANICWNSSLLSFRNEGFNDLLECLNSNWPNLSLEEKNLVVMM 283
+C+ E H+ CS + +CW L ++ + + + ++ L ++
Sbjct: 20 ICDICDEDAKHLFFECSKSVVCWQQVGL------WHTIQQVRLPTSSCADIPQQQLFAVI 73
Query: 282 LWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQWEAAH*MR 160
LW+LWK+RN+ +W + +T+ A + L W+ A +R
Sbjct: 74 LWSLWKHRNNKVWNNVTETAQQTGERAMNFLSSWKNAQDVR 114
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 50.8 bits (120), Expect(2) = 2e-09
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Frame = -1
Query: 459 CNNEGESVAHILLTCSFANICWNSSLLSFRNEGFNDLLECLNSNWPNLSLEEKN------ 298
C + GE+V H+L C FA + W S L G + E L N ++ K+
Sbjct: 1095 CPSHGETVNHLLFKCPFARLTWAISPLPAPPGG--EWAESLFRNMHHVLSVHKSQPEESD 1152
Query: 297 ---LVVMMLWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQW 181
L+ +LW LWKNRND+++KG T+ ++ A+ ++ W
Sbjct: 1153 HHALIPWILWRLWKNRNDLVFKGREFTAPQVILKATEDMDAW 1194
Score = 36.2 bits (82), Expect(2) = 2e-09
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 142 NVRDGDTVWSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNG 14
+ RD W P G ++CN DGA G G G +LR+ G
Sbjct: 1207 STRDRCVKWQPPSHGWVKCNTDGAWSKDLGNCGVGWVLRNHTG 1249
>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
[Medicago truncatula]
Length = 547
Score = 42.4 bits (98), Expect(2) = 2e-08
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = -1
Query: 288 MMLWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQWEAA 172
MMLW +W+ RND +W G + S + A LFQW+AA
Sbjct: 1 MMLWCIWRRRNDKVWDGQLQPSNIAVQLARELLFQWQAA 39
Score = 41.6 bits (96), Expect(2) = 2e-08
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -3
Query: 127 DTV-WSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFI 5
DT+ W P G ++CNVD AIF++ + G G +RD G F+
Sbjct: 53 DTIAWQPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFL 94
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 47.8 bits (112), Expect(2) = 2e-08
Identities = 26/95 (27%), Positives = 42/95 (44%)
Frame = -1
Query: 465 PVCNNEGESVAHILLTCSFANICWNSSLLSFRNEGFNDLLECLNSNWPNLSLEEKNLVVM 286
P+C +E E+ H L+ C A W+ S L+ F ++ L + + +
Sbjct: 550 PICRSELETTLHALVECVAARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLA 609
Query: 285 MLWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQW 181
+ W LW RNDV+W G S ++N + L W
Sbjct: 610 VCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESW 644
Score = 35.8 bits (81), Expect(2) = 2e-08
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -3
Query: 118 WSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFI 5
W +P G I+ NVDGA+F G I G + RD G F+
Sbjct: 664 WQKPDYGWIKINVDGAVFPDKGAI--GAVFRDHQGRFM 699
>ref|NP_001175214.1| Os07g0501200 [Oryza sativa Japonica Group]
gi|255677791|dbj|BAH93942.1| Os07g0501200 [Oryza sativa
Japonica Group]
Length = 620
Score = 43.5 bits (101), Expect(2) = 3e-08
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = -1
Query: 462 VCNNEGESVAHILLTCSFANICWNSSLLSFRNEGFNDLLECLNSNW-----PNLSLEEKN 298
+C E E VAH L C A W SL S ++ F S W ++ EE
Sbjct: 325 ICGREEEDVAHALCRCPHATNLW-LSLRSSKDISFEAGASWSGSGWILDQLGLIAKEEGA 383
Query: 297 LVVMMLWALWKNRNDV 250
+ +M+LW +W NRN++
Sbjct: 384 MFLMLLWRIWYNRNEI 399
Score = 40.0 bits (92), Expect(2) = 3e-08
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = -3
Query: 211 EFCKLKFVPMGSSTLNEIKDGRFNVRDGDTV--WSRPKPGEIECNVDGAIFAQTGKIGYG 38
+F K KFV S L +K G V D + W +P PG ++ NVDG+ A+ G G G
Sbjct: 432 DFAKGKFVV---SNLGCMK-GTSQVPDPKVLNHWEKPNPGWMKLNVDGSFDARYGSGGIG 487
Query: 37 CILRDSNGVFI 5
+LR+S G I
Sbjct: 488 AVLRNSAGSLI 498
>ref|XP_003605496.1| hypothetical protein MTR_4g032310 [Medicago truncatula]
gi|355506551|gb|AES87693.1| hypothetical protein
MTR_4g032310 [Medicago truncatula]
Length = 283
Score = 56.2 bits (134), Expect(2) = 3e-08
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Frame = -1
Query: 462 VCNNEGESVAHILLTCSFANICWNSSLLSFRNEGF----NDLLECLNSNWPNLSLEEKNL 295
+C E +H+L C A W SLL + N E + + LS ++ L
Sbjct: 1 MCEESYEDASHVLFDCPRARKVWQDSLLLSKVNSVMWCNNTAAEFIFALLQELSHDQAEL 60
Query: 294 VVMMLWALWKNRNDVLWKGIGKTSVGLLNFASSNLFQWEAAH 169
+LW+LWK+RN LW+ + +TS +L A L W A+
Sbjct: 61 FASVLWSLWKSRNLRLWQNVRETSQAILECAKQILANWRTAN 102
Score = 27.3 bits (59), Expect(2) = 3e-08
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 118 WSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNGVFI 5
W +P ++CNVD + +G+G +R+ G I
Sbjct: 124 WQKPAHCRLKCNVDVSFSEALNCVGFGFCIRNEFGNLI 161
>gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 380
Score = 43.9 bits (102), Expect(2) = 4e-08
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -3
Query: 118 WSRPKPGEIECNVDGAIFAQTGKIGYGCILRDSNG 14
WS+P G +CNVD A A ++G+G +RD+NG
Sbjct: 288 WSKPSVGRFKCNVDAAFSASLHRVGFGACIRDANG 322
Score = 38.9 bits (89), Expect(2) = 4e-08
Identities = 23/84 (27%), Positives = 41/84 (48%)
Frame = -1
Query: 405 NICWNSSLLSFRNEGFNDLLECLNSNWPNLSLEEKNLVVMMLWALWKNRNDVLWKGIGKT 226
NI WN L + N W L + + + + LW+LW++RN+ +W I +T
Sbjct: 203 NIIWNLKLPP----------KIKNFLW-RLDIAHQQIFAVTLWSLWRHRNNKVWNNIVET 251
Query: 225 SVGLLNFASSNLFQWEAAH*MRLK 154
+ + + A + L W+AA R++
Sbjct: 252 TEEIGDRAVAFLNSWKAAQETRIR 275