BLASTX nr result

ID: Rehmannia26_contig00024936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00024936
         (340 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX91795.1| Zinc ion binding, putative isoform 2 [Theobroma c...    98   1e-18
gb|EOX91794.1| Zinc ion binding isoform 1 [Theobroma cacao]            95   8e-18
gb|EMJ07566.1| hypothetical protein PRUPE_ppa017844mg, partial [...    95   1e-17
ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ri...    88   1e-15
ref|XP_004289377.1| PREDICTED: E3 ubiquitin-protein ligase FANCL...    86   5e-15
ref|XP_006466407.1| PREDICTED: E3 ubiquitin-protein ligase FANCL...    82   1e-13
ref|XP_006466406.1| PREDICTED: E3 ubiquitin-protein ligase FANCL...    82   1e-13
ref|XP_006426161.1| hypothetical protein CICLE_v10026132mg [Citr...    81   1e-13
ref|XP_003559474.1| PREDICTED: E3 ubiquitin-protein ligase FANCL...    80   2e-13
ref|XP_006367048.1| PREDICTED: E3 ubiquitin-protein ligase FANCL...    79   6e-13
ref|XP_004234644.1| PREDICTED: E3 ubiquitin-protein ligase FANCL...    79   8e-13
ref|XP_002463953.1| hypothetical protein SORBIDRAFT_01g009490 [S...    78   1e-12
ref|XP_002310876.2| hypothetical protein POPTR_0007s14580g [Popu...    77   2e-12
ref|XP_006279667.1| hypothetical protein CARUB_v10026832mg [Caps...    77   2e-12
gb|ACG32061.1| ubiquitin ligase protein FANCL [Zea mays]               77   2e-12
ref|NP_001131416.1| ubiquitin ligase protein FANCL [Zea mays] gi...    77   2e-12
ref|XP_006393991.1| hypothetical protein EUTSA_v10004606mg [Eutr...    77   3e-12
ref|XP_004981914.1| PREDICTED: E3 ubiquitin-protein ligase FANCL...    76   4e-12
gb|EMT30313.1| E3 ubiquitin-protein ligase FANCL [Aegilops tausc...    76   5e-12
ref|XP_006650528.1| PREDICTED: E3 ubiquitin-protein ligase FANCL...    75   1e-11

>gb|EOX91795.1| Zinc ion binding, putative isoform 2 [Theobroma cacao]
          Length = 242

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 44/68 (64%), Positives = 53/68 (77%)
 Frame = -2

Query: 207 YCA*HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSL 28
           +C  H+ KLQGFWSTLD+IDRSLWV   K +  A+S RQI VGNDC I+  IN++DP SL
Sbjct: 47  FCIQHLEKLQGFWSTLDEIDRSLWVVDSKQASLAMSCRQIHVGNDCLIMLCININDPRSL 106

Query: 27  PECRFLGS 4
           PECRF+GS
Sbjct: 107 PECRFMGS 114


>gb|EOX91794.1| Zinc ion binding isoform 1 [Theobroma cacao]
          Length = 292

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 43/64 (67%), Positives = 51/64 (79%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H+ KLQGFWSTLD+IDRSLWV   K +  A+S RQI VGNDC I+  IN++DP SLPECR
Sbjct: 101 HLEKLQGFWSTLDEIDRSLWVVDSKQASLAMSCRQIHVGNDCLIMLCININDPRSLPECR 160

Query: 15  FLGS 4
           F+GS
Sbjct: 161 FMGS 164


>gb|EMJ07566.1| hypothetical protein PRUPE_ppa017844mg, partial [Prunus persica]
          Length = 302

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 45/67 (67%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPE-- 22
           H+ KLQ FWSTLDDIDRSLWV  PK +  AVSYRQI +GNDC I+ SIN  DP SLP+  
Sbjct: 100 HLEKLQAFWSTLDDIDRSLWVVDPKQASPAVSYRQINMGNDCFIVLSINAFDPRSLPDCV 159

Query: 21  -CRFLGS 4
            CRF+GS
Sbjct: 160 RCRFIGS 166


>ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ricinus communis]
           gi|223528344|gb|EEF30384.1| Ubiquitin ligase protein
           FANCL, putative [Ricinus communis]
          Length = 309

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/64 (64%), Positives = 47/64 (73%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H+ KLQ FWSTL+DID SL V     S HA+S+RQI +GNDC I+  IN  DP SLPECR
Sbjct: 70  HLEKLQEFWSTLEDIDNSLCVVDIHKSSHAISFRQIDIGNDCFIMLFINTKDPRSLPECR 129

Query: 15  FLGS 4
           FLGS
Sbjct: 130 FLGS 133


>ref|XP_004289377.1| PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Fragaria vesca
           subsp. vesca]
          Length = 292

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 41/64 (64%), Positives = 47/64 (73%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H+ +LQ FWSTLDDIDRSL V   K +  A S RQI +GNDC I+ SIN  DP SLPECR
Sbjct: 101 HLERLQTFWSTLDDIDRSLRVVEHKQASPAGSNRQISIGNDCFIMLSINATDPKSLPECR 160

Query: 15  FLGS 4
           F+GS
Sbjct: 161 FIGS 164


>ref|XP_006466407.1| PREDICTED: E3 ubiquitin-protein ligase FANCL-like isoform X2
           [Citrus sinensis]
          Length = 290

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 37/65 (56%), Positives = 47/65 (72%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H+ KLQ  W+ LD+ID+SLWV   KN   A   RQI +G +C I+ SI++DDP SLPECR
Sbjct: 98  HLEKLQEIWNILDEIDKSLWVIDLKNPSRANVCRQINLGYNCIIMLSIHIDDPSSLPECR 157

Query: 15  FLGSD 1
           F+GSD
Sbjct: 158 FMGSD 162


>ref|XP_006466406.1| PREDICTED: E3 ubiquitin-protein ligase FANCL-like isoform X1
           [Citrus sinensis]
          Length = 292

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 37/65 (56%), Positives = 47/65 (72%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H+ KLQ  W+ LD+ID+SLWV   KN   A   RQI +G +C I+ SI++DDP SLPECR
Sbjct: 100 HLEKLQEIWNILDEIDKSLWVIDLKNPSRANVCRQINLGYNCIIMLSIHIDDPSSLPECR 159

Query: 15  FLGSD 1
           F+GSD
Sbjct: 160 FMGSD 164


>ref|XP_006426161.1| hypothetical protein CICLE_v10026132mg [Citrus clementina]
           gi|557528151|gb|ESR39401.1| hypothetical protein
           CICLE_v10026132mg [Citrus clementina]
          Length = 310

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 36/65 (55%), Positives = 47/65 (72%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H+ KLQ  W+ LD+ID+SLWV   KN   A   RQ+ +G +C I+ SI++DDP SLPECR
Sbjct: 119 HLEKLQEIWNILDEIDKSLWVIDLKNPSRANVCRQVNLGYNCIIMLSIHIDDPSSLPECR 178

Query: 15  FLGSD 1
           F+GSD
Sbjct: 179 FMGSD 183


>ref|XP_003559474.1| PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Brachypodium
           distachyon]
          Length = 311

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 32/65 (49%), Positives = 47/65 (72%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H+  LQ +W T+DDID++LWV  P    +A+S+R+I +G+DC I+  ++   P SLPECR
Sbjct: 121 HLKNLQNYWCTMDDIDKALWVVDPTKPSYAMSHRRIALGDDCYILLHVDAHKPSSLPECR 180

Query: 15  FLGSD 1
           FLG+D
Sbjct: 181 FLGTD 185


>ref|XP_006367048.1| PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Solanum
           tuberosum]
          Length = 291

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 35/65 (53%), Positives = 48/65 (73%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H++KLQ FW+ +DDID SL V+  +    A+S+RQ+ + ND  II SI+ +DP SLP+CR
Sbjct: 101 HLDKLQDFWNLMDDIDHSLLVSDLRYPQRALSHRQLNISNDSYIILSIDANDPTSLPDCR 160

Query: 15  FLGSD 1
           FLGSD
Sbjct: 161 FLGSD 165


>ref|XP_004234644.1| PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Solanum
           lycopersicum]
          Length = 286

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 35/65 (53%), Positives = 47/65 (72%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H+ KLQ FW+ +DDID SL V+  +    A+S+RQ+ + ND  II SI+ +DP SLP+CR
Sbjct: 96  HLEKLQDFWNLMDDIDHSLLVSDLRYPQRALSHRQLNISNDSYIILSIDANDPTSLPDCR 155

Query: 15  FLGSD 1
           FLGSD
Sbjct: 156 FLGSD 160


>ref|XP_002463953.1| hypothetical protein SORBIDRAFT_01g009490 [Sorghum bicolor]
           gi|241917807|gb|EER90951.1| hypothetical protein
           SORBIDRAFT_01g009490 [Sorghum bicolor]
          Length = 361

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 32/65 (49%), Positives = 47/65 (72%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H+  LQ FWST+D+ID+ LW+  P    +A+S+R+I +G+DC I+  ++   P SLPECR
Sbjct: 169 HLKILQEFWSTMDEIDKVLWIVDPTKPSYAMSHRRISLGDDCYILLHVDARKPNSLPECR 228

Query: 15  FLGSD 1
           FLG+D
Sbjct: 229 FLGTD 233


>ref|XP_002310876.2| hypothetical protein POPTR_0007s14580g [Populus trichocarpa]
           gi|550334889|gb|EEE91326.2| hypothetical protein
           POPTR_0007s14580g [Populus trichocarpa]
          Length = 284

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/67 (56%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPE-- 22
           H+ +LQ FWSTL+DID SL VT+ K    A + RQI +GNDC I+ SIN  DP SLP+  
Sbjct: 101 HLEELQEFWSTLEDIDHSLCVTNKKKLSRATTCRQIDIGNDCSIMLSINARDPRSLPDLN 160

Query: 21  -CRFLGS 4
            CRF+GS
Sbjct: 161 RCRFMGS 167


>ref|XP_006279667.1| hypothetical protein CARUB_v10026832mg [Capsella rubella]
           gi|482548371|gb|EOA12565.1| hypothetical protein
           CARUB_v10026832mg [Capsella rubella]
          Length = 308

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 35/63 (55%), Positives = 42/63 (66%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H++ LQ FWS LDDID+SL V   K    A   R+I  GNDC ++  IN DDP SLPECR
Sbjct: 114 HLDDLQDFWSVLDDIDKSLSVVDAKQPSRASPVRRIHAGNDCILVIHINFDDPKSLPECR 173

Query: 15  FLG 7
           F+G
Sbjct: 174 FIG 176


>gb|ACG32061.1| ubiquitin ligase protein FANCL [Zea mays]
          Length = 322

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 31/65 (47%), Positives = 47/65 (72%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H+  LQ FW+T+D+ID+ LW+  P    +A+S+R+I +G+DC I+  ++   P SLPECR
Sbjct: 130 HLKILQEFWNTMDEIDKVLWIVDPTKPSYAMSHRRIALGDDCYILLQVDARKPNSLPECR 189

Query: 15  FLGSD 1
           FLG+D
Sbjct: 190 FLGTD 194


>ref|NP_001131416.1| ubiquitin ligase protein FANCL [Zea mays]
           gi|194691460|gb|ACF79814.1| unknown [Zea mays]
           gi|413933185|gb|AFW67736.1| ubiquitin ligase protein
           FANCL [Zea mays]
          Length = 322

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 31/65 (47%), Positives = 47/65 (72%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H+  LQ FW+T+D+ID+ LW+  P    +A+S+R+I +G+DC I+  ++   P SLPECR
Sbjct: 130 HLKILQEFWNTMDEIDKVLWIVDPTKPSYAMSHRRIALGDDCYILLQVDARKPNSLPECR 189

Query: 15  FLGSD 1
           FLG+D
Sbjct: 190 FLGTD 194


>ref|XP_006393991.1| hypothetical protein EUTSA_v10004606mg [Eutrema salsugineum]
           gi|557090630|gb|ESQ31277.1| hypothetical protein
           EUTSA_v10004606mg [Eutrema salsugineum]
          Length = 321

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/63 (55%), Positives = 42/63 (66%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H++ LQ FWS LDDID+SL V   K    +   R+I  GNDC +I  IN DDP SLPECR
Sbjct: 123 HLDNLQEFWSVLDDIDKSLCVVDAKQPSRSSPVRRIHAGNDCILIVHINFDDPKSLPECR 182

Query: 15  FLG 7
           F+G
Sbjct: 183 FIG 185


>ref|XP_004981914.1| PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Setaria italica]
          Length = 315

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 32/65 (49%), Positives = 47/65 (72%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H+  LQ FWS +D+ID+ LWV  P  S +A+S+R++ +G+DC I+  ++   P SLPECR
Sbjct: 124 HLKILQEFWSIMDEIDKVLWVVDPTKSAYAMSHRRLALGDDCYILLHVDPRKPSSLPECR 183

Query: 15  FLGSD 1
           FLG+D
Sbjct: 184 FLGAD 188


>gb|EMT30313.1| E3 ubiquitin-protein ligase FANCL [Aegilops tauschii]
          Length = 678

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 31/65 (47%), Positives = 46/65 (70%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H+  LQ +WST+D ID++LWV  P    +A+S+ +I +G+DC I+  ++   P SLPECR
Sbjct: 150 HLKVLQDYWSTMDGIDKALWVVDPTKPTYAMSHHRIALGDDCYILLHVDTHKPNSLPECR 209

Query: 15  FLGSD 1
           FLG+D
Sbjct: 210 FLGTD 214


>ref|XP_006650528.1| PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Oryza
           brachyantha]
          Length = 313

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 30/65 (46%), Positives = 45/65 (69%)
 Frame = -2

Query: 195 HVNKLQGFWSTLDDIDRSLWVTHPKNSHHAVSYRQIKVGNDCCIIFSINVDDPVSLPECR 16
           H+  LQ +WS +DDID+ LWV  P    +A+ +R+I +G+DC ++  ++   P SLPECR
Sbjct: 123 HLKMLQDYWSIMDDIDKVLWVVDPAKPTYAMCHRRIALGDDCYVLLHVDARKPRSLPECR 182

Query: 15  FLGSD 1
           FLG+D
Sbjct: 183 FLGTD 187


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