BLASTX nr result
ID: Rehmannia26_contig00024881
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00024881
(310 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like iso... 78 1e-12
ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like iso... 78 1e-12
ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Popu... 76 5e-12
ref|XP_002299520.2| DNA repair protein and transcription factor ... 76 5e-12
ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Popu... 76 5e-12
gb|EMJ11549.1| hypothetical protein PRUPE_ppa001762mg [Prunus pe... 75 9e-12
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri... 75 9e-12
ref|XP_006476522.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h... 75 1e-11
ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like iso... 74 2e-11
ref|XP_006439501.1| hypothetical protein CICLE_v100190882mg, par... 74 2e-11
ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like iso... 74 2e-11
gb|ABR16132.1| unknown [Picea sitchensis] 74 2e-11
gb|EXB37318.1| DNA repair helicase [Morus notabilis] 74 2e-11
gb|EOY24803.1| Xeroderma pigmentosum complementation group B 2 i... 74 2e-11
gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 i... 74 2e-11
gb|EPS67161.1| hypothetical protein M569_07617, partial [Genlise... 74 3e-11
ref|XP_004173655.1| PREDICTED: DNA repair helicase XPB1-like, pa... 74 3e-11
ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, pa... 74 3e-11
ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cu... 74 3e-11
ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Ci... 72 6e-11
>ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
Length = 769
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/50 (78%), Positives = 41/50 (82%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 159
RS SMSAMSGA GMVYMEYSTG+ K GQ KSKPKDPAKRH LFK+R G
Sbjct: 718 RSQGSMSAMSGAKGMVYMEYSTGRNKGQGQIKSKPKDPAKRHFLFKRRYG 767
>ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Glycine max]
Length = 768
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/50 (78%), Positives = 41/50 (82%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 159
RS SMSAMSGA GMVYMEYSTG+ K GQ KSKPKDPAKRH LFK+R G
Sbjct: 717 RSQGSMSAMSGAKGMVYMEYSTGRNKGQGQIKSKPKDPAKRHFLFKRRYG 766
>ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
gi|550346909|gb|ERP65333.1| hypothetical protein
POPTR_0001s09670g [Populus trichocarpa]
Length = 783
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/46 (80%), Positives = 38/46 (82%)
Frame = -3
Query: 296 SMSAMSGATGMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 159
SMSAMSGA GMVYMEYSTGQK GQ K KPKDPAKRH LFK+R G
Sbjct: 738 SMSAMSGANGMVYMEYSTGQKGGKGQIKGKPKDPAKRHYLFKRRFG 783
>ref|XP_002299520.2| DNA repair protein and transcription factor [Populus trichocarpa]
gi|550346908|gb|EEE84325.2| DNA repair protein and
transcription factor [Populus trichocarpa]
Length = 803
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/46 (80%), Positives = 38/46 (82%)
Frame = -3
Query: 296 SMSAMSGATGMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 159
SMSAMSGA GMVYMEYSTGQK GQ K KPKDPAKRH LFK+R G
Sbjct: 758 SMSAMSGANGMVYMEYSTGQKGGKGQIKGKPKDPAKRHYLFKRRFG 803
>ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
gi|550346907|gb|ERP65332.1| hypothetical protein
POPTR_0001s09670g [Populus trichocarpa]
Length = 786
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/46 (80%), Positives = 38/46 (82%)
Frame = -3
Query: 296 SMSAMSGATGMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 159
SMSAMSGA GMVYMEYSTGQK GQ K KPKDPAKRH LFK+R G
Sbjct: 741 SMSAMSGANGMVYMEYSTGQKGGKGQIKGKPKDPAKRHYLFKRRFG 786
>gb|EMJ11549.1| hypothetical protein PRUPE_ppa001762mg [Prunus persica]
Length = 768
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/51 (74%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKI-HGQTKSKPKDPAKRHRLFKQRLG 159
R SMSAMSGA GMVYMEYSTG+ K+ GQ KSKPKDPAKRH LFK+R G
Sbjct: 718 RFGGSMSAMSGANGMVYMEYSTGRHKLGKGQMKSKPKDPAKRHHLFKRRFG 768
>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
helicase, putative [Ricinus communis]
Length = 768
Score = 75.1 bits (183), Expect = 9e-12
Identities = 39/52 (75%), Positives = 42/52 (80%), Gaps = 2/52 (3%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKIHGQ--TKSKPKDPAKRHRLFKQRLG 159
RS SMSAMSGA GMVYMEYSTG+ K+ GQ KSKPKDPAKRH LFK+R G
Sbjct: 717 RSMGSMSAMSGAKGMVYMEYSTGRNKLAGQGHIKSKPKDPAKRHYLFKRRYG 768
>ref|XP_006476522.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase XPB1-like
[Citrus sinensis]
Length = 778
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/50 (74%), Positives = 40/50 (80%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 159
R A SMSAMSGA GMVYMEYSTGQKK+ K KPKDP+KRH LFK+R G
Sbjct: 729 RMAGSMSAMSGAQGMVYMEYSTGQKKLGLGQKGKPKDPSKRHYLFKRRFG 778
>ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
Length = 769
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 159
RS SMSAMSGA GMVYMEYST +K GQ KSKPKDPAKRH LFK+R G
Sbjct: 718 RSQGSMSAMSGAKGMVYMEYSTVRKGQQGQIKSKPKDPAKRHFLFKRRYG 767
>ref|XP_006439501.1| hypothetical protein CICLE_v100190882mg, partial [Citrus
clementina] gi|557541763|gb|ESR52741.1| hypothetical
protein CICLE_v100190882mg, partial [Citrus clementina]
Length = 269
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/50 (74%), Positives = 40/50 (80%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 159
R A SMSAMSGA GMVYMEYSTGQKK+ K KPKDP+KRH LFK+R G
Sbjct: 220 RIAGSMSAMSGAQGMVYMEYSTGQKKLGLGQKGKPKDPSKRHYLFKRRFG 269
>ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Glycine max]
Length = 768
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 159
RS SMSAMSGA GMVYMEYST +K GQ KSKPKDPAKRH LFK+R G
Sbjct: 717 RSQGSMSAMSGAKGMVYMEYSTVRKGQQGQIKSKPKDPAKRHFLFKRRYG 766
>gb|ABR16132.1| unknown [Picea sitchensis]
Length = 772
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/52 (71%), Positives = 42/52 (80%), Gaps = 2/52 (3%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKK--IHGQTKSKPKDPAKRHRLFKQRLG 159
RS SMSAMSGA+GMVYMEYSTG+ K + GQ KSKP+DP KRH LFK+R G
Sbjct: 721 RSVGSMSAMSGASGMVYMEYSTGRGKQGMQGQMKSKPRDPTKRHNLFKKRFG 772
>gb|EXB37318.1| DNA repair helicase [Morus notabilis]
Length = 787
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 159
RS SMSAMSGA GMVYMEYSTG+ K+ GQ KSKP+DPAKRH LFK+R G
Sbjct: 739 RSLGSMSAMSGANGMVYMEYSTGKGKLIGQ-KSKPRDPAKRHYLFKRRYG 787
>gb|EOY24803.1| Xeroderma pigmentosum complementation group B 2 isoform 2, partial
[Theobroma cacao]
Length = 809
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/52 (73%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKI--HGQTKSKPKDPAKRHRLFKQRLG 159
RS SMSAMSGA GMVYMEYSTG+ K GQ KSKPKDP+KRH LFK+R G
Sbjct: 758 RSTGSMSAMSGANGMVYMEYSTGKHKYPGQGQIKSKPKDPSKRHYLFKRRYG 809
>gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 isoform 1
[Theobroma cacao]
Length = 771
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/52 (73%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKI--HGQTKSKPKDPAKRHRLFKQRLG 159
RS SMSAMSGA GMVYMEYSTG+ K GQ KSKPKDP+KRH LFK+R G
Sbjct: 720 RSTGSMSAMSGANGMVYMEYSTGKHKYPGQGQIKSKPKDPSKRHYLFKRRYG 771
>gb|EPS67161.1| hypothetical protein M569_07617, partial [Genlisea aurea]
Length = 167
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/50 (74%), Positives = 44/50 (88%), Gaps = 2/50 (4%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYST-GQKKI-HGQTKSKPKDPAKRHRLFKQR 165
RS+ SMSAMSGA GMVYMEYST GQKK+ HG K+KPKDP+KRH+LF++R
Sbjct: 116 RSSGSMSAMSGARGMVYMEYSTGGQKKVLHGHAKTKPKDPSKRHQLFRKR 165
>ref|XP_004173655.1| PREDICTED: DNA repair helicase XPB1-like, partial [Cucumis sativus]
Length = 78
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/49 (77%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKI-HGQTKSKPKDPAKRHRLFKQR 165
RS SMSAMSGA GMVYMEYSTG+K GQ KSKPKDPAKRH LFK+R
Sbjct: 28 RSKGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKR 76
>ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, partial [Cucumis sativus]
Length = 725
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/49 (77%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKI-HGQTKSKPKDPAKRHRLFKQR 165
RS SMSAMSGA GMVYMEYSTG+K GQ KSKPKDPAKRH LFK+R
Sbjct: 675 RSKGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKR 723
>ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cucumis sativus]
Length = 768
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/49 (77%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKI-HGQTKSKPKDPAKRHRLFKQR 165
RS SMSAMSGA GMVYMEYSTG+K GQ KSKPKDPAKRH LFK+R
Sbjct: 718 RSKGSMSAMSGANGMVYMEYSTGRKLAGQGQLKSKPKDPAKRHHLFKKR 766
>ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Cicer arietinum]
Length = 765
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = -3
Query: 308 RSAKSMSAMSGATGMVYMEYSTGQKKIHGQTKSKPKDPAKRHRLFKQRLG 159
RS SMSAMSGA GMVYMEYSTG+K Q KSKPKDPAKRH LFK+R G
Sbjct: 715 RSQASMSAMSGAKGMVYMEYSTGRKG-QAQIKSKPKDPAKRHFLFKRRYG 763