BLASTX nr result
ID: Rehmannia26_contig00024804
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00024804
(465 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta] 130 1e-28
emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta] 130 1e-28
gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein ... 130 2e-28
emb|CAA57409.1| light harvesting chlorophyll a /b-binding protei... 130 2e-28
emb|CAA57408.1| light harvesting chlorophyll a /b-binding protei... 130 2e-28
ref|XP_003578597.1| PREDICTED: chlorophyll a-b binding protein 2... 130 2e-28
ref|XP_003578592.1| PREDICTED: chlorophyll a-b binding protein 2... 130 2e-28
gb|ADL41158.1| chloroplast light-harvesting chlorophyll a/b bind... 130 2e-28
dbj|BAJ93064.1| predicted protein [Hordeum vulgare subsp. vulgare] 130 2e-28
gb|ACN40194.1| unknown [Picea sitchensis] 130 2e-28
gb|ABK20976.1| unknown [Picea sitchensis] gi|116779697|gb|ABK213... 130 2e-28
gb|AAH53854.1| Unknown (protein for IMAGE:5194336), partial [Hom... 130 2e-28
gb|EMS51039.1| Chlorophyll a-b binding protein 3C, chloroplastic... 129 3e-28
tpg|DAA58850.1| TPA: chlorophyll a-b binding protein 48, Precurs... 129 3e-28
sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding pro... 129 4e-28
ref|NP_001142284.1| uncharacterized protein LOC100274453 [Zea ma... 129 4e-28
gb|AAC78690.1| chlorophyll a/b-binding protein [Pinus thunbergii] 129 4e-28
emb|CAA78379.1| chlorophyll a/b-binding protein PS II-Type I [So... 129 5e-28
ref|XP_006660556.1| PREDICTED: chlorophyll a-b binding protein 2... 129 5e-28
ref|XP_006646072.1| PREDICTED: chlorophyll a-b binding protein 2... 129 5e-28
>emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 130 bits (328), Expect = 1e-28
Identities = 68/103 (66%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQV++MGAVE SFDPLGLADDPDAFAELKVKEIKNGRLAMF
Sbjct: 172 CQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMF 231
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGPIENLADHL+DP VPGK
Sbjct: 232 SMFGFFVQAIVTGKGPIENLADHLADPVSNNAWAYATNFVPGK 274
>emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 130 bits (328), Expect = 1e-28
Identities = 68/103 (66%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQV++MGAVE SFDPLGLADDPDAFAELKVKEIKNGRLAMF
Sbjct: 172 CQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMF 231
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGPIENLADHL+DP VPGK
Sbjct: 232 SMFGFFVQAIVTGKGPIENLADHLADPVSNNAWAYATNFVPGK 274
>gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein of photosystem II
[Ginkgo biloba]
Length = 270
Score = 130 bits (326), Expect = 2e-28
Identities = 67/103 (65%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQV++MGAVE SFDPLGLADDPDAFAELKVKE+KNGRLAMF
Sbjct: 168 CQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMF 227
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGPIENLADHL+DP VPGK
Sbjct: 228 SMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 270
>emb|CAA57409.1| light harvesting chlorophyll a /b-binding protein Lhcb1*2-2 [Picea
abies]
Length = 275
Score = 130 bits (326), Expect = 2e-28
Identities = 67/103 (65%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQV++MGAVE SFDPLGLADDPDAFAELKVKE+KNGRLAMF
Sbjct: 173 CQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMF 232
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGPIENLADHL+DP VPGK
Sbjct: 233 SMFGFFVQAIVTGKGPIENLADHLADPVTNNAWAYATNFVPGK 275
>emb|CAA57408.1| light harvesting chlorophyll a /b-binding protein Lhcb1*2-1 [Picea
abies]
Length = 274
Score = 130 bits (326), Expect = 2e-28
Identities = 67/103 (65%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQV++MGAVE SFDPLGLADDPDAFAELKVKE+KNGRLAMF
Sbjct: 172 CQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMF 231
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGPIENLADHL+DP VPGK
Sbjct: 232 SMFGFFVQAIVTGKGPIENLADHLADPVTNNAWAYATNFVPGK 274
>ref|XP_003578597.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 6 [Brachypodium distachyon]
Length = 264
Score = 130 bits (326), Expect = 2e-28
Identities = 68/103 (66%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQVV+MGAVE SFDPLGLADDP+AFAELKVKEIKNGRLAMF
Sbjct: 162 CQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGP+ENLADHLSDP VPGK
Sbjct: 222 SMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 264
>ref|XP_003578592.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357159901|ref|XP_003578593.1| PREDICTED: chlorophyll
a-b binding protein 2, chloroplastic-like isoform 2
[Brachypodium distachyon]
gi|357159904|ref|XP_003578594.1| PREDICTED: chlorophyll
a-b binding protein 2, chloroplastic-like isoform 3
[Brachypodium distachyon]
gi|357159907|ref|XP_003578595.1| PREDICTED: chlorophyll
a-b binding protein 2, chloroplastic-like isoform 4
[Brachypodium distachyon]
gi|357159910|ref|XP_003578596.1| PREDICTED: chlorophyll
a-b binding protein 2, chloroplastic-like isoform 5
[Brachypodium distachyon]
Length = 265
Score = 130 bits (326), Expect = 2e-28
Identities = 68/103 (66%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQVV+MGAVE SFDPLGLADDP+AFAELKVKEIKNGRLAMF
Sbjct: 163 CQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 222
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGP+ENLADHLSDP VPGK
Sbjct: 223 SMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 265
>gb|ADL41158.1| chloroplast light-harvesting chlorophyll a/b binding protein
[Triticum aestivum]
Length = 266
Score = 130 bits (326), Expect = 2e-28
Identities = 68/103 (66%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQVV+MGAVE SFDPLGLADDP+AFAELKVKEIKNGRLAMF
Sbjct: 164 CQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 223
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGP+ENLADHLSDP VPGK
Sbjct: 224 SMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 266
>dbj|BAJ93064.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 130 bits (326), Expect = 2e-28
Identities = 68/103 (66%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQVV+MGAVE SFDPLGLADDP+AFAELKVKEIKNGRLAMF
Sbjct: 164 CQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 223
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGP+ENLADHLSDP VPGK
Sbjct: 224 SMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 266
>gb|ACN40194.1| unknown [Picea sitchensis]
Length = 274
Score = 130 bits (326), Expect = 2e-28
Identities = 67/103 (65%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQV++MGAVE SFDPLGLADDPDAFAELKVKE+KNGRLAMF
Sbjct: 172 CQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMF 231
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGPIENLADHL+DP VPGK
Sbjct: 232 SMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
>gb|ABK20976.1| unknown [Picea sitchensis] gi|116779697|gb|ABK21395.1| unknown
[Picea sitchensis] gi|116790882|gb|ABK25775.1| unknown
[Picea sitchensis] gi|148908056|gb|ABR17147.1| unknown
[Picea sitchensis] gi|148908517|gb|ABR17370.1| unknown
[Picea sitchensis] gi|224284311|gb|ACN39891.1| unknown
[Picea sitchensis] gi|224284945|gb|ACN40202.1| unknown
[Picea sitchensis] gi|224285575|gb|ACN40506.1| unknown
[Picea sitchensis] gi|224285579|gb|ACN40508.1| unknown
[Picea sitchensis]
Length = 274
Score = 130 bits (326), Expect = 2e-28
Identities = 67/103 (65%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQV++MGAVE SFDPLGLADDPDAFAELKVKE+KNGRLAMF
Sbjct: 172 CQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMF 231
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGPIENLADHL+DP VPGK
Sbjct: 232 SMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
>gb|AAH53854.1| Unknown (protein for IMAGE:5194336), partial [Homo sapiens]
gi|111494016|gb|AAI11385.1| Unknown (protein for
IMAGE:5198300), partial [Homo sapiens]
Length = 287
Score = 130 bits (326), Expect = 2e-28
Identities = 68/103 (66%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQVV+MGAVE SFDPLGLADDP+AFAELKVKEIKNGRLAMF
Sbjct: 185 CQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 244
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGP+ENLADHLSDP VPGK
Sbjct: 245 SMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 287
>gb|EMS51039.1| Chlorophyll a-b binding protein 3C, chloroplastic [Triticum urartu]
Length = 265
Score = 129 bits (325), Expect = 3e-28
Identities = 67/103 (65%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQVV+MGAVE SFDPLGLADDP+AFAELKVKE+KNGRLAMF
Sbjct: 163 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMF 222
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGP+ENLADHLSDP VPGK
Sbjct: 223 SMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 265
>tpg|DAA58850.1| TPA: chlorophyll a-b binding protein 48, Precursor [Zea mays]
Length = 264
Score = 129 bits (325), Expect = 3e-28
Identities = 68/103 (66%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQVV+MGAVE SFDPLGLADDP+AFAELKVKEIKNGRLAMF
Sbjct: 162 CQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGPIENLADHL+DP VPGK
Sbjct: 222 SMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVPGK 264
>sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1A,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1A; Short=CAB; AltName: Full=LHCP;
Flags: Precursor gi|20661|emb|CAA32657.1| unnamed
protein product [Pinus sylvestris]
Length = 278
Score = 129 bits (324), Expect = 4e-28
Identities = 66/103 (64%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQV++MGA+E +FDPLGLADDPDAFAELKVKEIKNGRLAMF
Sbjct: 176 CQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMF 235
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGPIENLADHL+DP VPGK
Sbjct: 236 SMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
>ref|NP_001142284.1| uncharacterized protein LOC100274453 [Zea mays]
gi|194708004|gb|ACF88086.1| unknown [Zea mays]
gi|195613594|gb|ACG28627.1| chlorophyll a-b binding
protein 2 [Zea mays] gi|413950532|gb|AFW83181.1| light
harvesting chlorophyll a/b binding protein1 isoform 1
[Zea mays] gi|413950533|gb|AFW83182.1| light harvesting
chlorophyll a/b binding protein1 isoform 2 [Zea mays]
Length = 264
Score = 129 bits (324), Expect = 4e-28
Identities = 67/103 (65%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQVV+MGAVE SFDPLGLADDP+AFAELKVKEIKNGRLAMF
Sbjct: 162 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 221
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGP+ENLADHL+DP VPGK
Sbjct: 222 SMFGFFVQAIVTGKGPVENLADHLADPVNNNAWAYATNFVPGK 264
>gb|AAC78690.1| chlorophyll a/b-binding protein [Pinus thunbergii]
Length = 274
Score = 129 bits (324), Expect = 4e-28
Identities = 67/103 (65%), Positives = 70/103 (67%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQV++MGAVE SFDPLGLADDPDAFAELKVKEIKNGRLAMF
Sbjct: 172 CQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNGRLAMF 231
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGPIENL DHL+DP VPGK
Sbjct: 232 SMFGFFVQAIVTGKGPIENLTDHLADPVNNNAWAYATNFVPGK 274
>emb|CAA78379.1| chlorophyll a/b-binding protein PS II-Type I [Solanum tuberosum]
Length = 267
Score = 129 bits (323), Expect = 5e-28
Identities = 67/103 (65%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQVV+MGAVE SFDPLGLADDP+AFAELKVKEIKNGRLAMF
Sbjct: 165 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 224
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGP+ENLADHL+DP VPGK
Sbjct: 225 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>ref|XP_006660556.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
[Oryza brachyantha]
Length = 263
Score = 129 bits (323), Expect = 5e-28
Identities = 67/103 (65%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQVV+MGAVE SFDPLGLADDP+AFAELKVKEIKNGRLAMF
Sbjct: 161 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 220
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGP+ENLADHL+DP VPGK
Sbjct: 221 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>ref|XP_006646072.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
[Oryza brachyantha]
Length = 237
Score = 129 bits (323), Expect = 5e-28
Identities = 67/103 (65%), Positives = 71/103 (68%)
Frame = +2
Query: 2 CQVVIMGAVEXXXXXXXXXXXXXXXXXXXXSFDPLGLADDPDAFAELKVKEIKNGRLAMF 181
CQVV+MGAVE SFDPLGLADDP+AFAELKVKEIKNGRLAMF
Sbjct: 135 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 194
Query: 182 SMFGFFVQAIVTGKGPIENLADHLSDPXXXXXXXXXXXXVPGK 310
SMFGFFVQAIVTGKGP+ENLADHL+DP VPGK
Sbjct: 195 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 237