BLASTX nr result
ID: Rehmannia26_contig00024582
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00024582
(399 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMS67607.1| Putative disease resistance protein RGA3 [Triticu... 72 6e-11
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 72 1e-10
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 72 1e-10
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 70 2e-10
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers... 70 2e-10
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta... 70 2e-10
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 69 6e-10
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 69 8e-10
gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze... 68 1e-09
ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein A... 67 2e-09
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 67 2e-09
gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. ... 67 2e-09
dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ... 67 3e-09
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 67 3e-09
ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S... 67 3e-09
gb|ABF97084.1| retrotransposon protein, putative, unclassified [... 67 3e-09
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ... 67 3e-09
emb|CAB75484.1| putative protein [Arabidopsis thaliana] 67 3e-09
ref|XP_002513482.1| conserved hypothetical protein [Ricinus comm... 66 4e-09
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 66 5e-09
>gb|EMS67607.1| Putative disease resistance protein RGA3 [Triticum urartu]
Length = 1426
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/96 (36%), Positives = 56/96 (58%)
Frame = +3
Query: 3 YKVLTDYRTNAADVPEASNYQLSSKKMWIATWKMRVKNKLKMFVWKCLKGAIPTLDKLAS 182
Y +L + R N + +S +++W + W+++V+ KL++F W+ LKG +P ++L
Sbjct: 146 YMMLMEDRENNFNQVGSST---QGEEVWKSLWRLKVRPKLRIFWWRVLKGFLPAKEELCR 202
Query: 183 RGCKFETTCPMCGEMEESLEHLLFKCFRARLAWKLA 290
R + TCPMCG EESL H L C A+L W+ A
Sbjct: 203 RHVGDDLTCPMCGNQEESLFHSLVTCDHAKLFWREA 238
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Frame = +3
Query: 3 YKVLTDYRT----NAADVPEASNYQLSSKKMWIATWKMRVKNKLKMFVWKCLKGAIPTLD 170
Y V + Y+ N + PE+SN SS ++W W + + K+K+F+W+ LK +PT +
Sbjct: 1105 YSVKSGYQLALNQNFPNEPESSN---SSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAE 1161
Query: 171 KLASRGCKFETTCPMCGEMEESLEHLLFKCFRARLAWKLAPLNWDGMEEETDCFFG---- 338
L R E C C E++ H+L +C AR W LAPL ++ FF
Sbjct: 1162 NLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKDHNQDFFSAIQE 1221
Query: 339 WWHRLSNLE 365
W R S E
Sbjct: 1222 MWSRSSTAE 1230
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Frame = +3
Query: 3 YKVLTDYRT----NAADVPEASNYQLSSKKMWIATWKMRVKNKLKMFVWKCLKGAIPTLD 170
Y V + Y+ N + PE+SN SS ++W W + + K+K+F+W+ LK +PT +
Sbjct: 418 YSVKSGYQLALNQNFPNEPESSN---SSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAE 474
Query: 171 KLASRGCKFETTCPMCGEMEESLEHLLFKCFRARLAWKLAPLNWDGMEEETDCFFG---- 338
L R E C C E++ H+L +C AR W LAPL ++ FF
Sbjct: 475 NLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKDHNQDFFSAIQE 534
Query: 339 WWHRLSNLE 365
W R S E
Sbjct: 535 MWSRSSTAE 543
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/97 (31%), Positives = 47/97 (48%)
Frame = +3
Query: 78 KMWIATWKMRVKNKLKMFVWKCLKGAIPTLDKLASRGCKFETTCPMCGEMEESLEHLLFK 257
K+W WK ++ K+K+F WK + + + RG + CP CGE EE+ EHL++
Sbjct: 1049 KLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWG 1108
Query: 258 CFRARLAWKLAPLNWDGMEEETDCFFGWWHRLSNLEK 368
C + AW ++PL E F W L + K
Sbjct: 1109 CDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHK 1145
>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/90 (35%), Positives = 51/90 (56%)
Frame = +3
Query: 30 NAADVPEASNYQLSSKKMWIATWKMRVKNKLKMFVWKCLKGAIPTLDKLASRGCKFETTC 209
N V + Q S + WK++ + K+K+F+WK L GAIP +D L+ RG K ++ C
Sbjct: 873 NLGQVAIEAMMQPSLNDLKTQVWKLQTEPKIKVFLWKVLSGAIPVVDLLSYRGMKLDSRC 932
Query: 210 PMCGEMEESLEHLLFKCFRARLAWKLAPLN 299
CG ES++H+LF C R W ++ ++
Sbjct: 933 QTCGCEGESIQHVLFSCSFPRQVWAMSNIH 962
>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1094
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/67 (44%), Positives = 41/67 (61%)
Frame = +3
Query: 96 WKMRVKNKLKMFVWKCLKGAIPTLDKLASRGCKFETTCPMCGEMEESLEHLLFKCFRARL 275
W + K+K+F+WK LKGA+ D+L +RG E C MC E E+L H+LF+C AR
Sbjct: 776 WNLNSAPKIKVFLWKVLKGAVAVEDRLRTRGVLIEDGCSMCPEKNETLNHILFQCPLARQ 835
Query: 276 AWKLAPL 296
W L P+
Sbjct: 836 VWALTPM 842
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 68.9 bits (167), Expect = 6e-10
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = +3
Query: 96 WKMRVKNKLKMFVWKCLKGAIPTLDKLASRGCKFETTCPMCGEMEESLEHLLFKCFRARL 275
WK++ K K F W+CL G + T +L SR E CP CG EES+ HLLF C +R
Sbjct: 927 WKIKTTRKFKHFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQ 986
Query: 276 AWKLAPL 296
W L+P+
Sbjct: 987 IWALSPI 993
>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1138
Score = 68.6 bits (166), Expect = 8e-10
Identities = 29/90 (32%), Positives = 49/90 (54%)
Frame = +3
Query: 21 YRTNAADVPEASNYQLSSKKMWIATWKMRVKNKLKMFVWKCLKGAIPTLDKLASRGCKFE 200
+++N D+ + +N S+ + W + K+KMF+W+ L A+P D++ RG +
Sbjct: 798 FQSNKLDLIQQANLLPSTNGLKEQVWSTKSSPKIKMFLWRILSAALPVADQIIRRGMSID 857
Query: 201 TTCPMCGEMEESLEHLLFKCFRARLAWKLA 290
C +CG+ ES H+LF C AR W L+
Sbjct: 858 PRCQICGDEGESTNHVLFTCSMARQVWALS 887
>gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays]
Length = 472
Score = 68.2 bits (165), Expect = 1e-09
Identities = 29/94 (30%), Positives = 49/94 (52%)
Frame = +3
Query: 3 YKVLTDYRTNAADVPEASNYQLSSKKMWIATWKMRVKNKLKMFVWKCLKGAIPTLDKLAS 182
Y + + R + + +S+ + +W + W + V NK+KMF+W+ + P +A
Sbjct: 124 YALASRRRDHHNNADASSSISGRGENVWKSIWNVNVTNKIKMFLWRLAHNSHPVRVNIAR 183
Query: 183 RGCKFETTCPMCGEMEESLEHLLFKCFRARLAWK 284
RG K ET CPMC ++E HL KC + + W+
Sbjct: 184 RGIKIETLCPMCFRLDEDGGHLFLKCKKVKQVWR 217
>ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 335
Score = 67.4 bits (163), Expect = 2e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Frame = +3
Query: 45 PEASNYQLSSKKMWIATWKMRVKNKLKMFVWKCLKGAIPTLDKLASRGCKFETTCPMCGE 224
P+ S+ W WK+ + K+K+FVWK K +PT + L RG E C CG
Sbjct: 4 PDPPGCSRSNSSKWSIIWKLSLPEKIKIFVWKATKNLLPTAENLCKRGIVQEAHCKRCGN 63
Query: 225 MEESLEHLLFKCFRARLAWKLAPL 296
E++ H+L C A+ W+ +P+
Sbjct: 64 KVENILHVLVTCKAAKKVWQRSPV 87
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Frame = +3
Query: 3 YKVLTDYRTNAADVPEASNY---QLSSKKMWIATWKMRVKNKLKMFVWKCLKGAIPTLDK 173
Y V + Y T D+ E + L++ K +I WK++ KL+ F+W+ L G +P +
Sbjct: 797 YTVKSGYHTARLDLNEGTTLIGPDLTTLKAYI--WKVQCPPKLRHFLWQILSGCVPVSEN 854
Query: 174 LASRGCKFETTCPMCGEMEESLEHLLFKCFRARLAWKLAPL 296
L RG + C CG EES+ H LF+C AR W L+ +
Sbjct: 855 LRKRGILCDKGCVSCGASEESINHTLFQCHPARQIWALSQI 895
>gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 1555
Score = 67.0 bits (162), Expect = 2e-09
Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Frame = +3
Query: 96 WKMRVKNKLKMFVWKCLKGAIPTLDKLASRGCKFETTCPMCGEMEESLEHLLFKCFRARL 275
WK+ K+K+FVWK LKGA+P ++L R + C CG ES+ HLLF C A+
Sbjct: 1252 WKLDCAPKVKLFVWKVLKGAVPVGERLLERHIDIDPRCKRCGS-NESITHLLFHCQFAQR 1310
Query: 276 AWKLAPL----NWDGMEEETDCFFGWWHRLSNLE 365
W LAPL ++ GM + W LSNL+
Sbjct: 1311 VWHLAPLATAPDFRGMID----LMADWPALSNLK 1340
>dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1197
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 3 YKVLTDYRTNAADVPEASNYQLSSKKMWI-ATWKMRVKNKLKMFVWKCLKGAIPTLDKLA 179
Y T Y+ DV S+ W W ++ K+++F+WK + GA+P +LA
Sbjct: 842 YTTKTGYKATLCDVDSDSSRDPVLSFNWFDEVWNVQCSPKIRLFLWKAVSGALPVGSQLA 901
Query: 180 SRGCKFETTCPMCGEMEESLEHLLFKCFRARLAWKLAPL 296
R F+ C CGE+E S H LF C + W+LAPL
Sbjct: 902 IRIPSFDPVCCRCGELETS-SHALFNCMFVQRVWRLAPL 939
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Frame = +3
Query: 3 YKVLTDYRTNAADVP----EASNYQLSSKKMWIATWKMRVKNKLKMFVWKCLKGAIPTLD 170
Y V T Y + V + + + S ++ W + K+++F+WK L GAIP D
Sbjct: 1011 YSVKTGYEFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVED 1070
Query: 171 KLASRGCKFETTCPMCGEMEESLEHLLFKCFRARLAWKLAPLNWDGME 314
+L +RG + + C MC E++ H+LF+C AR W + L+ G E
Sbjct: 1071 RLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAITHLSSAGSE 1118
>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
gi|241920472|gb|EER93616.1| hypothetical protein
SORBIDRAFT_01g011130 [Sorghum bicolor]
Length = 463
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +3
Query: 3 YKVLTD-YRTNAADVPEASNYQLSSKKMWIATWKMRVKNKLKMFVWKCLKGAIPTLDKLA 179
YKV D Y N + +W WK+ NK+K F+W+ L + P D L
Sbjct: 114 YKVARDTYIRNHTSQGQQGGSNPGPLSLWKRVWKLSCPNKIKHFLWRFLHNSHPLRDNLI 173
Query: 180 SRGCKFETTCPMCGEMEESLEHLLFKCFRARLAWKLAPLN 299
RG + CP+C ++ E HL FKC AR W+L L+
Sbjct: 174 RRGMEIVPRCPVCNQVGEDGGHLFFKCGMARQVWELLGLS 213
>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1184
Score = 66.6 bits (161), Expect = 3e-09
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = +3
Query: 69 SSKKMWIATWKMRVKNKLKMFVWKCLKGAIPTLDKLASRGCKFETTCPMCGEMEESLEHL 248
SS+ +W WK+ + K+K+F W+ L G IP LA + + CP+C E ++H+
Sbjct: 855 SSRPVWDNLWKLEIPPKIKIFAWRMLHGVIPCKGILADKHIAVQGGCPVCSSGVEDIKHM 914
Query: 249 LFKCFRARLAWK 284
+F C RA+L WK
Sbjct: 915 VFTCRRAKLIWK 926
>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1185
Score = 66.6 bits (161), Expect = 3e-09
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = +3
Query: 69 SSKKMWIATWKMRVKNKLKMFVWKCLKGAIPTLDKLASRGCKFETTCPMCGEMEESLEHL 248
SS+ +W WK+ + K+K+F W+ L G IP LA + + CP+C E ++H+
Sbjct: 855 SSRPVWDNLWKLEIPPKIKIFAWRMLHGVIPCKGILADKHIAVQGGCPVCSSGVEDIKHM 914
Query: 249 LFKCFRARLAWK 284
+F C RA+L WK
Sbjct: 915 VFTCRRAKLIWK 926
>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
Length = 851
Score = 66.6 bits (161), Expect = 3e-09
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +3
Query: 96 WKMRVKNKLKMFVWKCLKGAIPTLDKLASRGCKFETTCPMCGEMEESLEHLLFKCFRARL 275
W + + KLK F+W+ L A+PT D+L +RG + + CP C ES+ H LF C A +
Sbjct: 668 WNLPIMPKLKHFLWRILSKALPTTDRLTTRGMRIDPGCPRCRRENESINHALFTCPFATM 727
Query: 276 AWKLA 290
AW+L+
Sbjct: 728 AWRLS 732
>ref|XP_002513482.1| conserved hypothetical protein [Ricinus communis]
gi|223547390|gb|EEF48885.1| conserved hypothetical
protein [Ricinus communis]
Length = 152
Score = 66.2 bits (160), Expect = 4e-09
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +3
Query: 84 WIATWKMRVKNKLKMFVWKCLKGAIPTLDKLASRGCKFETTCPMCGEMEESLEHLLFKCF 263
WI+ W+++V K++ F+WKC A+ L + C C CG EE+LEHL+F C
Sbjct: 77 WISIWQLKVPPKVRAFMWKCAHNALAIKINLVHKHCGNNGLCSNCGMQEEALEHLMFFCD 136
Query: 264 RARLAWKLAPLNW 302
RA+L W L++
Sbjct: 137 RAKLIWFSCALSY 149
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 65.9 bits (159), Expect = 5e-09
Identities = 30/73 (41%), Positives = 45/73 (61%)
Frame = +3
Query: 96 WKMRVKNKLKMFVWKCLKGAIPTLDKLASRGCKFETTCPMCGEMEESLEHLLFKCFRARL 275
WK+ K+K F+WK +KGA+P + L+ R + E TC CG+ E SL HL+ C A+
Sbjct: 975 WKIHTSPKVKHFLWKAMKGALPVGEALSRRNIEAEVTCKRCGQTESSL-HLMLLCPYAKK 1033
Query: 276 AWKLAPLNWDGME 314
W+LAP+ ++ E
Sbjct: 1034 VWELAPVLFNPSE 1046