BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00024559
         (701 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   149   6e-55
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   139   3e-51
emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]   146   6e-51
ref|XP_006494841.1| PREDICTED: uncharacterized protein LOC102608...   137   2e-50
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]   137   5e-50
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...   136   2e-48
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]   132   3e-48
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   131   4e-48
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz...   134   4e-48
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]   137   6e-48
ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa In...   137   6e-48
gb|ABA99232.1| retrotransposon protein, putative, Ty1-copia subc...   137   6e-48
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc...   134   2e-47
emb|CAN64288.1| hypothetical protein VITISV_022326 [Vitis vinifera]   137   5e-47
ref|YP_002000554.1| orf490 [Oryza sativa Japonica Group] gi|2349...   134   5e-47
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   128   7e-47
emb|CAN68480.1| hypothetical protein VITISV_007280 [Vitis vinifera]   130   9e-47
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...   134   2e-46
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc...   135   3e-46
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   131   3e-46

>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  149 bits (376), Expect(2) = 6e-55
 Identities = 71/123 (57%), Positives = 98/123 (79%), Gaps = 3/123 (2%)
 Frame = +1

Query: 13   LSQKTDRKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTTVR 192
            +S  T+R  +GCRWVFK+  + +G V+++KARLVAKGY+ + G D+ ETFSPV+KPTT+R
Sbjct: 779  VSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIR 838

Query: 193  VVLSIVVSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFE--QGKGKHLVCKL-KSLYGL 363
            VVL+I VS SW IRQ+D++N FLNG++  ++YM+QPPGF+    + + LVCKL K+LYGL
Sbjct: 839  VVLAIAVSQSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGL 898

Query: 364  KQA 372
            KQA
Sbjct: 899  KQA 901



 Score = 92.0 bits (227), Expect(2) = 6e-55
 Identities = 52/104 (50%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
 Frame = +3

Query: 399  KTHISL---GFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSF 569
            K  ISL   GFS +++D SLF +      + VLVYVDDI++T S+S EI +LI+ L+  F
Sbjct: 908  KLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGLF 967

Query: 570  SLKDLGVLNYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGMEKA 701
            SLKDLG L+YFLG +V     GGL LSQ++YI+++L K  M+ A
Sbjct: 968  SLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGA 1011


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  139 bits (351), Expect(2) = 3e-51
 Identities = 67/140 (47%), Positives = 95/140 (67%), Gaps = 1/140 (0%)
 Frame = +1

Query: 7    HGLSQKTDRKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTT 186
            H +  K  R  IGC+WV+K+   A+G + ++KARLVAKGY    G+DY +TFSPV+K  T
Sbjct: 835  HLVPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFSPVVKHAT 894

Query: 187  VRVVLSIVVSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGL 363
            +R++LSI VS  W++ Q+D+ N FL+G ++ ++YM+QPPG+E     + VCKL K+LYGL
Sbjct: 895  IRIILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVCKLDKALYGL 954

Query: 364  KQASIA*SSNLAKLTFLLDF 423
            KQA  A  S L+     L F
Sbjct: 955  KQAPRAWYSRLSNKLLSLGF 974



 Score = 89.4 bits (220), Expect(2) = 3e-51
 Identities = 45/95 (47%), Positives = 65/95 (68%)
 Frame = +3

Query: 408  ISLGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLG 587
            +SLGF  S+AD+SLF+ + G   I VLVYVDDI++  S     + L++ L K F+LKDLG
Sbjct: 970  LSLGFQASKADTSLFFYNKGSVTIFVLVYVDDIIVASSTHKATEALLSDLNKEFALKDLG 1029

Query: 588  VLNYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGM 692
             LNYFLG +V+ +   G+ L+Q++Y  ++L K GM
Sbjct: 1030 DLNYFLGIEVNKV-RDGIILTQDKYASDLLKKVGM 1063


>emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]
          Length = 955

 Score =  146 bits (369), Expect(2) = 6e-51
 Identities = 71/123 (57%), Positives = 97/123 (78%), Gaps = 3/123 (2%)
 Frame = +1

Query: 13  LSQKTDRKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTTVR 192
           +S  T+R  +GCRWVFK+  + +G V+++KARLVAKGY+ + G D+ ETFS V+KPTT+R
Sbjct: 570 VSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSXVVKPTTIR 629

Query: 193 VVLSIVVSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFE--QGKGKHLVCKL-KSLYGL 363
           VVL IVVS SW IRQ+D++N FLNG++  ++YM+QPPGF+    + + LVCKL K+LYGL
Sbjct: 630 VVLXIVVSQSWFIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGL 689

Query: 364 KQA 372
           KQA
Sbjct: 690 KQA 692



 Score = 81.3 bits (199), Expect(2) = 6e-51
 Identities = 49/105 (46%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
 Frame = +3

Query: 399  KTHISL---GFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSF 569
            K  ISL   GFS ++ D SLF +      + VLVYVDDI++T S+S  I +LI+ L   F
Sbjct: 699  KLKISLQQFGFSSTKXDQSLFVRFTNCSSLFVLVYVDDIVVTXSSSQXIHELISRLXGLF 758

Query: 570  SLKDLGVLNYFLGTQVHHIDSGGLFLS-QEQYIKEILAKAGMEKA 701
             LKDLG L+YFLG +V     GGL LS +++YI+++L K  M+ A
Sbjct: 759  XLKDLGXLSYFLGIEVKKTTBGGLHLSXKKKYIQDLLKKTKMDGA 803


>ref|XP_006494841.1| PREDICTED: uncharacterized protein LOC102608996 [Citrus sinensis]
          Length = 1923

 Score =  137 bits (344), Expect(2) = 2e-50
 Identities = 67/117 (57%), Positives = 84/117 (71%), Gaps = 1/117 (0%)
 Frame = +1

Query: 25   TDRKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTTVRVVLS 204
            +  K +GC+WVF+   +  G V+KHKARLVAKG+    G+DY ETFSPV+K +TVR +LS
Sbjct: 725  SQHKLVGCKWVFRTKYNTYGTVSKHKARLVAKGFHQTAGVDYKETFSPVVKSSTVRTILS 784

Query: 205  IVVSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGLKQA 372
            + V   W +RQ+DI+N FLNGDI  DLYM QP GF   +G   VCKL K+LYGLKQA
Sbjct: 785  LAVMKGWKVRQIDINNAFLNGDISEDLYMTQPEGFITKEG--YVCKLSKALYGLKQA 839



 Score = 89.4 bits (220), Expect(2) = 2e-50
 Identities = 47/95 (49%), Positives = 68/95 (71%)
 Frame = +3

Query: 411  SLGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLGV 590
            S  F  S+AD+SLF +H+    I+VL+YVDDILIT  +S  ++  IT   K F+LKDLG 
Sbjct: 853  SWNFFNSKADTSLFIRHDTRGIILVLIYVDDILITGPDSSLLETFITKFSKVFALKDLGF 912

Query: 591  LNYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGME 695
            ++YFLG +V + DS G+ LSQ +YIK++L++A M+
Sbjct: 913  VSYFLGVEVCYTDS-GMHLSQTKYIKDLLSRASMQ 946


>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
          Length = 1312

 Score =  137 bits (345), Expect(2) = 5e-50
 Identities = 69/136 (50%), Positives = 95/136 (69%), Gaps = 1/136 (0%)
 Frame = +1

Query: 25   TDRKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTTVRVVLS 204
            ++ K IGC+WVFK+    NG + ++KARLVA+G+    G+D+ ETFSPV+KP T+R+VLS
Sbjct: 835  SNAKIIGCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCTIRLVLS 894

Query: 205  IVVSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGLKQASIA 381
            I VS++W I+Q+D+ N FLNGD+   ++M QPPGFE       VC+L K+LYGLKQA  A
Sbjct: 895  IAVSSNWPIKQLDVHNAFLNGDLQEQVFMMQPPGFEDNSCPTHVCRLQKALYGLKQAPRA 954

Query: 382  *SSNLAKLTFLLDFPF 429
                L+  +FLL   F
Sbjct: 955  WFHKLS--SFLLQIGF 968



 Score = 87.4 bits (215), Expect(2) = 5e-50
 Identities = 44/98 (44%), Positives = 67/98 (68%)
 Frame = +3

Query: 408  ISLGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLG 587
            + +GF  SRAD+SLFY H+    I++L+YVDDILIT SN   +  +I+ L   F+L+DLG
Sbjct: 964  LQIGFQCSRADASLFYFHSASDIIILLIYVDDILITGSNPSRVHQIISQLSSHFALRDLG 1023

Query: 588  VLNYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGMEKA 701
             ++YFLG +V    S  L L+Q++YI ++L +A + +A
Sbjct: 1024 DISYFLGIEVTR-RSHALHLNQQRYIHQLLERANLHEA 1060


>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
           gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
           Japonica Group]
          Length = 821

 Score =  136 bits (342), Expect(2) = 2e-48
 Identities = 65/132 (49%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
 Frame = +1

Query: 7   HGLSQKTDRKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTT 186
           H +  +  R  I C+WV+KV   A+G + ++KARLVAKG+    G+DY +TFSPV+K  T
Sbjct: 337 HLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 396

Query: 187 VRVVLSIVVSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGL 363
           +R+VLS+ VS  W++RQ+D+ N FL+G ++ ++YMEQPPG+E+    + VCKL K+LYGL
Sbjct: 397 IRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMEQPPGYEKKSMPNYVCKLDKALYGL 456

Query: 364 KQASIA*SSNLA 399
           KQA  A  S L+
Sbjct: 457 KQAPRAWYSRLS 468



 Score = 83.2 bits (204), Expect(2) = 2e-48
 Identities = 44/93 (47%), Positives = 61/93 (65%)
 Frame = +3

Query: 414 LGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLGVL 593
           LGF  S+AD+SLF+   G+  I +L+YVDDI++  S       L+  L K F+LKDLG L
Sbjct: 474 LGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIMASSVPDATSTLLQELSKDFALKDLGDL 533

Query: 594 NYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGM 692
           +YFLG +VH +   GL LSQE+Y  ++L + GM
Sbjct: 534 HYFLGIEVHKV-KDGLMLSQEKYASDLLRRVGM 565


>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
          Length = 1074

 Score =  132 bits (333), Expect(2) = 3e-48
 Identities = 67/136 (49%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
 Frame = +1

Query: 25  TDRKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTTVRVVLS 204
           ++ K I C+WVFK+    NG + ++KARLVA+G+    G+D+ ETFSPV+KP T+R+VLS
Sbjct: 581 SNAKIIRCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCTIRLVLS 640

Query: 205 IVVSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGLKQASIA 381
           I VS++W I+Q+D+ N FLNGD+   ++M QPPGFE       VC+L K+LYGLKQ   A
Sbjct: 641 IAVSSNWPIKQLDVHNAFLNGDLQEQVFMMQPPGFEDSSCPTHVCRLQKALYGLKQGPRA 700

Query: 382 *SSNLAKLTFLLDFPF 429
               L+  +FLL   F
Sbjct: 701 WFHKLS--SFLLQIGF 714



 Score = 86.3 bits (212), Expect(2) = 3e-48
 Identities = 43/98 (43%), Positives = 67/98 (68%)
 Frame = +3

Query: 408  ISLGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLG 587
            + +GF  SRA++SLFY H+    I++L+YVDDILIT SN   +  +I+ L   F+L+DLG
Sbjct: 710  LQIGFQCSRANASLFYFHSASDIIILLIYVDDILITGSNPSRVHQIISQLSSHFALRDLG 769

Query: 588  VLNYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGMEKA 701
             ++YFLG +V  + S  L L+Q+ YI ++L +A + +A
Sbjct: 770  DISYFLGIKVTRL-SHALHLNQQHYIHQLLERANLHEA 806


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  131 bits (330), Expect(2) = 4e-48
 Identities = 62/132 (46%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
 Frame = +1

Query: 7    HGLSQKTDRKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTT 186
            H +  +  R  I C+WV+K+    +G + ++KARLVAKG+    G+DY +TFSPV+K  T
Sbjct: 953  HLVPPQQGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 1012

Query: 187  VRVVLSIVVSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGL 363
            +R++LSI VS  W +RQ+D+ N FL+G ++ ++YM+QPPG+E       VCKL K+LYGL
Sbjct: 1013 IRIILSIAVSRGWCLRQLDVQNAFLHGVLEEEVYMKQPPGYENPSTPDYVCKLDKALYGL 1072

Query: 364  KQASIA*SSNLA 399
            KQA  A  S L+
Sbjct: 1073 KQAPRAWYSRLS 1084



 Score = 87.0 bits (214), Expect(2) = 4e-48
 Identities = 46/99 (46%), Positives = 65/99 (65%)
 Frame = +3

Query: 396  GKTHISLGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSL 575
            GK H  LGF  S+AD+SLF+ + G   I +L+YVDDI++  S    +  L+  LQK F+L
Sbjct: 1085 GKLH-DLGFKGSKADTSLFFYNKGSLTIFLLIYVDDIIVVSSRKEAVSALLQDLQKEFAL 1143

Query: 576  KDLGVLNYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGM 692
            KDLG L+YFLG +V  I  GG+ +SQE+Y  ++L +  M
Sbjct: 1144 KDLGDLHYFLGIEVTKI-PGGILMSQEKYASDLLKRVNM 1181


>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
            Group]
          Length = 1399

 Score =  134 bits (338), Expect(2) = 4e-48
 Identities = 64/132 (48%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
 Frame = +1

Query: 7    HGLSQKTDRKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTT 186
            H +  +  R  I C+WV+KV   A+G + ++KARLVAKG+    G+DY +TFSPV+K  T
Sbjct: 915  HLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 974

Query: 187  VRVVLSIVVSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGL 363
            +R+VLS+ VS  W++RQ+D+ N FL+G ++ ++YM+QPPG+E+    + VCKL K+LYGL
Sbjct: 975  IRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMPNYVCKLDKALYGL 1034

Query: 364  KQASIA*SSNLA 399
            KQA  A  S L+
Sbjct: 1035 KQAPRAWYSRLS 1046



 Score = 84.0 bits (206), Expect(2) = 4e-48
 Identities = 44/93 (47%), Positives = 61/93 (65%)
 Frame = +3

Query: 414  LGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLGVL 593
            LGF  S+AD+SLF+   G+  I +L+YVDDI++  S       L+  L K F+LKDLG L
Sbjct: 1052 LGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIVASSVPDATSTLLQELSKDFALKDLGDL 1111

Query: 594  NYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGM 692
            +YFLG +VH +   GL LSQE+Y  ++L + GM
Sbjct: 1112 HYFLGIEVHKV-KDGLMLSQEKYASDLLRRVGM 1143


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score =  137 bits (345), Expect(2) = 6e-48
 Identities = 68/137 (49%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
 Frame = +1

Query: 25   TDRKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTTVRVVLS 204
            ++   +GC+WVF++  + +G ++++KARLVAKG+    G+DY +TFSPV+KPTT+RVVLS
Sbjct: 933  SNHNIVGCKWVFRIKRNPDGSISRYKARLVAKGFHQRPGVDYHDTFSPVVKPTTIRVVLS 992

Query: 205  IVVSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGLKQASIA 381
            I +SN W I Q+D++N FL+G +  D+YM QPPG+        VC+L K+LYGLKQA  A
Sbjct: 993  IALSNXWXISQLDVNNXFLHGTLTEDVYMAQPPGYVDQANPTHVCRLQKALYGLKQAPRA 1052

Query: 382  *SSNLAKLTFLLDFPFL 432
                L   TFLL F F+
Sbjct: 1053 WYMELR--TFLLTFGFI 1067



 Score = 80.5 bits (197), Expect(2) = 6e-48
 Identities = 44/96 (45%), Positives = 60/96 (62%)
 Frame = +3

Query: 408  ISLGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLG 587
            ++ GF  S+ D+SLF        I  LVYVDD+L+T + S  I+  I  L   FSLKDLG
Sbjct: 1062 LTFGFINSKXDTSLFIYQXRSATIYFLVYVDDLLVTGNCSQSIRRFIDALAHRFSLKDLG 1121

Query: 588  VLNYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGME 695
             L+YFLG +     S G+FLSQ QY++++LAK  +E
Sbjct: 1122 PLSYFLGVEGAISTSDGMFLSQHQYVRDLLAKFNLE 1157


>ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa Indica Group]
           gi|289065044|ref|YP_003433855.1| hypothetical protein
           OrrupM_p18 [Oryza rufipogon] gi|74100111|gb|AAZ99275.1|
           hypothetical protein (mitochondrion) [Oryza sativa
           Indica Group] gi|74100166|gb|AAZ99329.1| hypothetical
           protein (mitochondrion) [Oryza sativa Japonica Group]
           gi|74100220|gb|AAZ99382.1| hypothetical protein
           (mitochondrion) [Oryza sativa Japonica Group]
           gi|285026126|dbj|BAI67959.1| hypothetical protein [Oryza
           rufipogon] gi|285026155|dbj|BAI67987.1| hypothetical
           protein [Oryza sativa Indica Group]
           gi|353685219|gb|AER12982.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|353685288|gb|AER13050.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|374277649|gb|AEZ03755.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|374277659|gb|AEZ03764.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|528540457|dbj|BAN67511.1| hypothetical protein
           (mitochondrion) [Oryza rufipogon]
           gi|528540460|dbj|BAN67513.1| hypothetical protein
           (mitochondrion) [Oryza rufipogon]
          Length = 490

 Score =  137 bits (344), Expect(2) = 6e-48
 Identities = 64/124 (51%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
 Frame = +1

Query: 31  RKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTTVRVVLSIV 210
           R  I C+WV+K+   A+G + ++KARLVAKG+    G+DY ETFSPV+K  T+R++LS+ 
Sbjct: 23  RNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGIDYEETFSPVVKAATIRLILSLA 82

Query: 211 VSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGLKQASIA*S 387
           VSN W++RQ+D+ N FL+G ++ D+YM QPPG+E       VCKL K+LYGLKQA  A  
Sbjct: 83  VSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCKLDKALYGLKQAPRAWF 142

Query: 388 SNLA 399
           S L+
Sbjct: 143 SRLS 146



 Score = 80.9 bits (198), Expect(2) = 6e-48
 Identities = 41/94 (43%), Positives = 62/94 (65%)
 Frame = +3

Query: 411 SLGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLGV 590
           +LGF  S+AD+SLF+   G   I VL+YVDDI++  S       L+  L++ F+LKDLG 
Sbjct: 151 NLGFQPSKADASLFFYKKGTISIFVLIYVDDIIVASSCEKATSALLQDLKEEFALKDLGA 210

Query: 591 LNYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGM 692
           L+YFLG +V+ +   G+ L+QE+Y  ++L + GM
Sbjct: 211 LHYFLGIEVNKVHD-GIILTQEKYATDLLKRVGM 243


>gb|ABA99232.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 308

 Score =  137 bits (344), Expect(2) = 6e-48
 Identities = 64/124 (51%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
 Frame = +1

Query: 31  RKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTTVRVVLSIV 210
           R  I C+WV+K+   A+G + ++KARLVAKG+    G+DY ETFSPV+K  T+R++LS+ 
Sbjct: 23  RNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGIDYEETFSPVVKAATIRLILSLA 82

Query: 211 VSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGLKQASIA*S 387
           VSN W++RQ+D+ N FL+G ++ D+YM QPPG+E       VCKL K+LYGLKQA  A  
Sbjct: 83  VSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCKLDKALYGLKQAPRAWF 142

Query: 388 SNLA 399
           S L+
Sbjct: 143 SRLS 146



 Score = 80.9 bits (198), Expect(2) = 6e-48
 Identities = 41/94 (43%), Positives = 62/94 (65%)
 Frame = +3

Query: 411 SLGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLGV 590
           +LGF  S+AD+SLF+   G   I VL+YVDDI++  S       L+  L++ F+LKDLG 
Sbjct: 151 NLGFQPSKADASLFFYKKGTISIFVLIYVDDIIVASSCEKATSALLQDLKEEFALKDLGA 210

Query: 591 LNYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGM 692
           L+YFLG +V+ +   G+ L+QE+Y  ++L + GM
Sbjct: 211 LHYFLGIEVNKVHD-GIILTQEKYATDLLKRVGM 243


>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1241

 Score =  134 bits (338), Expect(2) = 2e-47
 Identities = 64/132 (48%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
 Frame = +1

Query: 7    HGLSQKTDRKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTT 186
            H +  +  R  I C+WV+KV   A+G + ++KARLVAKG+    G+DY +TFSPV+K  T
Sbjct: 861  HLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 920

Query: 187  VRVVLSIVVSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGL 363
            +R+VLS+ VS  W++RQ+D+ N FL+G ++ ++YM+QPPG+E+    + VCKL K+LYGL
Sbjct: 921  IRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMPNYVCKLDKALYGL 980

Query: 364  KQASIA*SSNLA 399
            KQA  A  S L+
Sbjct: 981  KQAPRAWYSRLS 992



 Score = 81.6 bits (200), Expect(2) = 2e-47
 Identities = 43/93 (46%), Positives = 60/93 (64%)
 Frame = +3

Query: 414  LGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLGVL 593
            LGF  S+AD+SLF+   G+  I +L+YVDDI++  S       L+  L K F+LKDLG L
Sbjct: 998  LGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIVASSVPDATSTLLQELSKDFALKDLGDL 1057

Query: 594  NYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGM 692
            +Y LG +VH +   GL LSQE+Y  ++L + GM
Sbjct: 1058 HYLLGIEVHKV-KDGLMLSQEKYASDLLRRVGM 1089


>emb|CAN64288.1| hypothetical protein VITISV_022326 [Vitis vinifera]
          Length = 1508

 Score =  137 bits (346), Expect(2) = 5e-47
 Identities = 61/112 (54%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
 Frame = +1

Query: 40   IGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTTVRVVLSIVVSN 219
            +GCRW++K+    NG V +HKARLVA+G+T  LG+DY +TFSP++KP T+R++L++ VS 
Sbjct: 1051 VGCRWIYKLKYLPNGSVERHKARLVAQGFTQTLGVDYFDTFSPIVKPCTIRLILTLAVSF 1110

Query: 220  SWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGLKQA 372
             W IRQ+D++N FLNGD+  +++M QP GF   +  H VCKL K+LYGLKQA
Sbjct: 1111 QWXIRQLDVENAFLNGDLQEEVFMAQPQGFVHPQYPHYVCKLHKALYGLKQA 1162



 Score = 77.0 bits (188), Expect(2) = 5e-47
 Identities = 41/96 (42%), Positives = 58/96 (60%)
 Frame = +3

Query: 408  ISLGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLG 587
            +  GF  SR D+SLF  H     +++LVYVDDIL+T SN   +   I+ L   F+L+DLG
Sbjct: 1175 VDYGFQSSRVDTSLFIHHTASNILILLVYVDDILVTGSNPKLVSHFISYLHDKFALRDLG 1234

Query: 588  VLNYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGME 695
             L+YFLG Q        L L+Q++YI ++L +  ME
Sbjct: 1235 PLSYFLGIQAQQ-QGLVLHLNQQKYIADLLHRTQME 1269


>ref|YP_002000554.1| orf490 [Oryza sativa Japonica Group] gi|23495377|dbj|BAC19858.1|
           orf490 [Oryza sativa Japonica Group]
          Length = 490

 Score =  134 bits (336), Expect(2) = 5e-47
 Identities = 62/124 (50%), Positives = 88/124 (70%), Gaps = 1/124 (0%)
 Frame = +1

Query: 31  RKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTTVRVVLSIV 210
           R  I C+WV+K+   A+G + ++KARLVAKG+    G+DY ETFSPV+K  T+R++LS+ 
Sbjct: 23  RNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGIDYEETFSPVVKAATIRLILSLA 82

Query: 211 VSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGLKQASIA*S 387
           VSN W++RQ+D+ N FL+G ++ D+YM QPPG+E       VCKL K+LYGL+ A  A  
Sbjct: 83  VSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCKLDKALYGLRHAPRAWF 142

Query: 388 SNLA 399
           S L+
Sbjct: 143 SRLS 146



 Score = 80.9 bits (198), Expect(2) = 5e-47
 Identities = 41/94 (43%), Positives = 62/94 (65%)
 Frame = +3

Query: 411 SLGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLGV 590
           +LGF  S+AD+SLF+   G   I VL+YVDDI++  S       L+  L++ F+LKDLG 
Sbjct: 151 NLGFQPSKADASLFFYKKGTISIFVLIYVDDIIVASSCEKATSALLQDLKEEFALKDLGA 210

Query: 591 LNYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGM 692
           L+YFLG +V+ +   G+ L+QE+Y  ++L + GM
Sbjct: 211 LHYFLGIEVNKVHD-GIILTQEKYATDLLKRVGM 243


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score =  128 bits (321), Expect(2) = 7e-47
 Identities = 61/133 (45%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
 Frame = +1

Query: 7    HGLSQKTDRKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTT 186
            H +  +  R  I  +WV+K+    +G + ++KARLVAKG+    G+DY +TFSPV+K  T
Sbjct: 778  HLVPPQKGRNIIDYKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 837

Query: 187  VRVVLSIVVSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGL 363
            +R++LSI VS  WT+RQ+D+ N FL+G ++ ++YM+QPPG+E       VCKL K+LYGL
Sbjct: 838  IRIILSIAVSRGWTLRQLDVQNAFLHGILEEEVYMKQPPGYEDKVHPDYVCKLDKALYGL 897

Query: 364  KQASIA*SSNLAK 402
            KQA  A  + L++
Sbjct: 898  KQAPRAWYAKLSQ 910



 Score = 86.3 bits (212), Expect(2) = 7e-47
 Identities = 45/93 (48%), Positives = 64/93 (68%)
 Frame = +3

Query: 414  LGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLGVL 593
            LGF  S+AD+SLF+ + G   I VLVYVDDI++  S    +  L+  LQK F+LKDLG L
Sbjct: 915  LGFQGSKADTSLFFYNKGGLIIFVLVYVDDIIVASSRQDAVPALLKDLQKDFALKDLGDL 974

Query: 594  NYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGM 692
            +YFLG +V+   S G+ L+QE+Y+ ++L + GM
Sbjct: 975  HYFLGIEVNKA-SSGIVLTQEKYVTDLLRRVGM 1006


>emb|CAN68480.1| hypothetical protein VITISV_007280 [Vitis vinifera]
          Length = 619

 Score =  130 bits (328), Expect(2) = 9e-47
 Identities = 67/131 (51%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
 Frame = +1

Query: 40  IGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTTVRVVLSIVVSN 219
           +GC+WVF++  +++G + + KA LVAKG+    G+DY ETFSPVIKPTT+ +VLSI VSN
Sbjct: 181 VGCKWVFRIKRNSDGSIDRFKACLVAKGFHQRPGVDYLETFSPVIKPTTMILVLSIAVSN 240

Query: 220 SWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGLKQASIA*SSNL 396
            W++RQ+D++N FL G I   +YM QPPGF        VCKL K++YGLKQA       L
Sbjct: 241 GWSLRQLDVNNAFLQGTISETVYMAQPPGFIDADKPTHVCKLHKAIYGLKQAPRTWYHEL 300

Query: 397 AKLTFLLDFPF 429
            +  FL+DF F
Sbjct: 301 CQ--FLVDFGF 309



 Score = 83.2 bits (204), Expect(2) = 9e-47
 Identities = 43/96 (44%), Positives = 62/96 (64%)
 Frame = +3

Query: 408 ISLGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLG 587
           +  GF  S +D+SLF  H G   + +LVYVDDI+IT ++   +  ++  L + FSLKDLG
Sbjct: 305 VDFGFKNSHSDTSLFVLHAGTNLLYLLVYVDDIIITGNSDDLVSQVVECLAQRFSLKDLG 364

Query: 588 VLNYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGME 695
            L+YFLG +V H    GL LSQ +YIK++L +  M+
Sbjct: 365 PLSYFLGVEVVH-HRHGLLLSQRRYIKDLLTRTNMQ 399


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|31433472|gb|AAP54977.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1031

 Score =  134 bits (337), Expect(2) = 2e-46
 Identities = 67/140 (47%), Positives = 93/140 (66%), Gaps = 1/140 (0%)
 Frame = +1

Query: 7   HGLSQKTDRKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTT 186
           H +  K  +  I C+WV+KV   A+G + ++KARLVAKG+    G+DY +TF PV+K  T
Sbjct: 554 HRVPSKKGQNIIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFRPVVKAAT 613

Query: 187 VRVVLSIVVSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGL 363
           +R +LSI +S  WT+RQ+D+ N FL+G ++ D++M QPPG+EQ  G   VCKL K+LYGL
Sbjct: 614 IRTILSIAISRGWTLRQLDVQNAFLHGVLEEDVFMRQPPGYEQKDG--YVCKLDKALYGL 671

Query: 364 KQASIA*SSNLAKLTFLLDF 423
           KQA  A  S L+     L F
Sbjct: 672 KQAPRAWYSRLSTKLHELGF 691



 Score = 78.6 bits (192), Expect(2) = 2e-46
 Identities = 39/93 (41%), Positives = 62/93 (66%)
 Frame = +3

Query: 414 LGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLGVL 593
           LGF  S++D+SLF+   G+  I +LVYVDDI++  S+ +    L+  L + F+LKDLG L
Sbjct: 689 LGFKSSKSDTSLFFYSKGDVTIFMLVYVDDIIVASSSIVATNALLKNLNQEFALKDLGRL 748

Query: 594 NYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGM 692
           +YFLG +V  ++  G+ L+QE+Y  ++L +  M
Sbjct: 749 HYFLGIEVKEVND-GIVLTQEKYAMDVLKRVNM 780


>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1202

 Score =  135 bits (341), Expect(2) = 3e-46
 Identities = 68/140 (48%), Positives = 94/140 (67%), Gaps = 1/140 (0%)
 Frame = +1

Query: 7    HGLSQKTDRKCIGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTT 186
            H +  K  +  I C+WV+KV   A+G + ++KARLVAKG+    G+DY +TFSPV+K  T
Sbjct: 816  HLVPSKKGQNIIDCKWVYKVKQKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAAT 875

Query: 187  VRVVLSIVVSNSWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGL 363
            +R +LSI +S  WT+RQ+D+ N FL+G ++ D++M QPPG+EQ  G   VCKL K+LYGL
Sbjct: 876  IRTILSIAISRGWTLRQLDVQNAFLHGVLEEDVFMRQPPGYEQKDG--YVCKLDKALYGL 933

Query: 364  KQASIA*SSNLAKLTFLLDF 423
            KQA  A  S L+     L F
Sbjct: 934  KQAPRAWYSRLSTKLHELGF 953



 Score = 76.6 bits (187), Expect(2) = 3e-46
 Identities = 39/93 (41%), Positives = 62/93 (66%)
 Frame = +3

Query: 414  LGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLGVL 593
            LGF  S++D+SLF+   G+  I +LVYVDDI++  S+      L+  L + F+LKDLG L
Sbjct: 951  LGFKSSKSDTSLFFYSKGDVTIFMLVYVDDIIVASSSIDATNALLKNLNQEFALKDLGRL 1010

Query: 594  NYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGM 692
            +YFLG +V  +++ G+ L+QE+Y  ++L +  M
Sbjct: 1011 HYFLGIEVKELNN-GIVLTQEKYAMDVLKRVNM 1042


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  131 bits (329), Expect(2) = 3e-46
 Identities = 63/131 (48%), Positives = 92/131 (70%), Gaps = 1/131 (0%)
 Frame = +1

Query: 40   IGCRWVFKV*SDANGCVAKHKARLVAKGYTHMLGLDYTETFSPVIKPTTVRVVLSIVVSN 219
            +GCRW++K+    +G + +HKARLVA+G+T   G+DY +TFSPV+KP T+R++L++ VS 
Sbjct: 900  VGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSF 959

Query: 220  SWTIRQVDIDNTFLNGDIDTDLYMEQPPGFEQGKGKHLVCKL-KSLYGLKQASIA*SSNL 396
             W++RQ+D++N FLNGD++ +++M QP GF        VCKL K+LYGLKQA  A    L
Sbjct: 960  QWSVRQLDVENAFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKL 1019

Query: 397  AKLTFLLDFPF 429
                 LLD+ F
Sbjct: 1020 R--IALLDYGF 1028



 Score = 80.9 bits (198), Expect(2) = 3e-46
 Identities = 43/96 (44%), Positives = 62/96 (64%)
 Frame = +3

Query: 408  ISLGFSISRADSSLFYKHNGERCIMVLVYVDDILITRSNSLEIQDLIT*LQKSFSLKDLG 587
            +  GF  SRAD+SLF  H     +++LVYVDDIL+T SN + +   I+ L+  F+L+DLG
Sbjct: 1024 LDYGFQSSRADTSLFIFHTATDILILLVYVDDILVTGSNPMLVSHFISYLRTKFALRDLG 1083

Query: 588  VLNYFLGTQVHHIDSGGLFLSQEQYIKEILAKAGME 695
             L+YFLG Q   + S  L L+Q +YI ++L +  ME
Sbjct: 1084 PLSYFLGIQAQQLGS-VLHLNQHKYIADLLNRTQME 1118