BLASTX nr result
ID: Rehmannia26_contig00024553
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00024553
(1022 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004516946.1| PREDICTED: NAD(P)H-quinone oxidoreductase ch... 410 e-112
ref|XP_003621689.1| Photosystem I iron-sulfur center [Medicago t... 400 e-109
ref|XP_003604161.1| NADH dehydrogenase subunit [Medicago truncat... 364 3e-98
emb|CCQ71672.1| NADH dehydrogenase subunit 4 (chloroplast) [Salv... 288 2e-75
ref|YP_007507162.1| NADH dehydrogenase subunit 4 (chloroplast) [... 288 2e-75
ref|YP_007353965.1| NADH dehydrogenase subunit 4 (chloroplast) [... 284 4e-74
prf||1211235CP NADH dehydrogenase 4-like ORF 509B 282 1e-73
ref|YP_004935717.1| ndhD gene product (chloroplast) [Sesamum ind... 280 6e-73
ref|YP_003359409.1| NADH dehydrogenase subunit 4 (chloroplast) [... 278 2e-72
gb|AGL45386.1| NdhD (chloroplast) [Sesamum indicum] 278 2e-72
ref|YP_004222696.1| NADH-plastoquinone oxidoreductase subunit 4 ... 278 2e-72
ref|YP_007353821.1| NADH dehydrogenase subunit 4 (chloroplast) [... 276 7e-72
ref|YP_007025957.1| NADH-plastoquinone oxidoreductase subunit 4 ... 274 4e-71
gb|ADM92664.1| NADH-plastoquinone oxidoreductase subunit 4 [Fran... 273 1e-70
gb|AFV61863.1| NADH dehydrogenase subunit 4 (chloroplast) [Origa... 272 1e-70
ref|NP_054557.2| NADH dehydrogenase subunit 4 [Nicotiana tabacum... 272 2e-70
ref|YP_008964083.1| NADH dehydrogenase subunit 4 [Ajuga reptans]... 272 2e-70
sp|Q2VED0.1|NU4C_SOLTU RecName: Full=NAD(P)H-quinone oxidoreduct... 272 2e-70
ref|YP_004891666.1| ndhD gene product (chloroplast) [Nicotiana u... 272 2e-70
ref|YP_004465243.1| NADH-plastoquinone oxidoreductase subunit 4 ... 272 2e-70
>ref|XP_004516946.1| PREDICTED: NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic-like [Cicer arietinum]
Length = 587
Score = 410 bits (1053), Expect = e-112
Identities = 206/293 (70%), Positives = 221/293 (75%)
Frame = -1
Query: 881 MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT 702
MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT
Sbjct: 1 MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT 60
Query: 701 DFLSVRVYLWHETTRSMGLAY*YVP*NST*IHFIFFTDKTRAQNILI*ARIFLAKVYLVF 522
DFLSVRVYLWHETTRSM AR+FLA+VYL+F
Sbjct: 61 DFLSVRVYLWHETTRSM-------------------------------ARVFLAQVYLIF 89
Query: 521 TMNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAFCYHFQSDD 342
N+FP LT++VVLPI AGSLI PHRGN+VIRWY TYAFCYHFQ DD
Sbjct: 90 ITNNFPWLTIVVVLPIAAGSLILLFPHRGNKVIRWYSICICLIDLLLTTYAFCYHFQLDD 149
Query: 341 PLIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLML 162
PLIQL E+YKWI+FFDF+WRLGIDGLSIGPILLTGFITTLATLAA PVTR+ LF+FLML
Sbjct: 150 PLIQLTENYKWINFFDFYWRLGIDGLSIGPILLTGFITTLATLAAQPVTREYPLFYFLML 209
Query: 161 AMYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYTA 3
AMYSGQ+G LIPVYLL++MWGGKKRLYSATKFILYTA
Sbjct: 210 AMYSGQMGPFASRDILLFFIMWELELIPVYLLLAMWGGKKRLYSATKFILYTA 262
>ref|XP_003621689.1| Photosystem I iron-sulfur center [Medicago truncatula]
gi|355496704|gb|AES77907.1| Photosystem I iron-sulfur
center [Medicago truncatula]
Length = 587
Score = 400 bits (1029), Expect = e-109
Identities = 203/293 (69%), Positives = 218/293 (74%)
Frame = -1
Query: 881 MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT 702
MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT
Sbjct: 1 MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT 60
Query: 701 DFLSVRVYLWHETTRSMGLAY*YVP*NST*IHFIFFTDKTRAQNILI*ARIFLAKVYLVF 522
DFLSVRVYL ETTRSM AR FLA+VYL+F
Sbjct: 61 DFLSVRVYLGPETTRSM-------------------------------ARAFLAQVYLIF 89
Query: 521 TMNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAFCYHFQSDD 342
N+FP LT++VV PI GSLIF PHRGN+VIRWY TYAFCYHFQ DD
Sbjct: 90 MTNYFPWLTIVVVFPIAVGSLIFLFPHRGNKVIRWYSISICLIDLLLTTYAFCYHFQLDD 149
Query: 341 PLIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLML 162
PLIQL E+YKWI+FFDF+WRLGIDGLSIGPILLTGFITTLATLAA PVTR+ +LF+FLML
Sbjct: 150 PLIQLTENYKWINFFDFYWRLGIDGLSIGPILLTGFITTLATLAAQPVTREYQLFYFLML 209
Query: 161 AMYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYTA 3
AMYSGQIG LIPVY+L++MWGGKKRLYSATKFILYTA
Sbjct: 210 AMYSGQIGPFSSRDILLFFIMWELELIPVYILLAMWGGKKRLYSATKFILYTA 262
>ref|XP_003604161.1| NADH dehydrogenase subunit [Medicago truncatula]
gi|355505216|gb|AES86358.1| NADH dehydrogenase subunit
[Medicago truncatula]
Length = 573
Score = 364 bits (935), Expect = 3e-98
Identities = 191/293 (65%), Positives = 205/293 (69%)
Frame = -1
Query: 881 MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT 702
MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT
Sbjct: 1 MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPT 60
Query: 701 DFLSVRVYLWHETTRSMGLAY*YVP*NST*IHFIFFTDKTRAQNILI*ARIFLAKVYLVF 522
DFLSVRVYL ETTRSM AR FLA+VYL+F
Sbjct: 61 DFLSVRVYLGPETTRSM-------------------------------ARAFLAQVYLIF 89
Query: 521 TMNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAFCYHFQSDD 342
N+FP LT++VV PI AGSLIF PHRGN+VIRWY TYAFCYHFQ DD
Sbjct: 90 MTNYFPWLTIVVVFPIAAGSLIFLFPHRGNKVIRWYSISICLIDLLLTTYAFCYHFQLDD 149
Query: 341 PLIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLML 162
PLIQL E+YKWI+FFDF+WRLGIDGLSIGPILLTGFITTLATLAA PVTR+ +LF+FLML
Sbjct: 150 PLIQLTENYKWINFFDFYWRLGIDGLSIGPILLTGFITTLATLAAQPVTREYQLFYFLML 209
Query: 161 AMYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYTA 3
AMYSGQIG LIPVY+L+ FILYTA
Sbjct: 210 AMYSGQIGPFSSRDILLFFIMWELELIPVYILL--------------FILYTA 248
>emb|CCQ71672.1| NADH dehydrogenase subunit 4 (chloroplast) [Salvia miltiorrhiza]
Length = 513
Score = 288 bits (738), Expect = 2e-75
Identities = 143/181 (79%), Positives = 147/181 (81%)
Frame = -1
Query: 545 LAKVYLVFTMNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAF 366
+A+ YLVFT NHFPCLT+IVVLPIFAG LIFFLPHRGNRVIRWY TYAF
Sbjct: 1 MAQAYLVFTTNHFPCLTIIVVLPIFAGCLIFFLPHRGNRVIRWYTICMCILELLLTTYAF 60
Query: 365 CYHFQSDDPLIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS 186
CYHFQSDDPLIQL+EDYKWI F DFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS
Sbjct: 61 CYHFQSDDPLIQLIEDYKWILFLDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS 120
Query: 185 RLFHFLMLAMYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYT 6
RLFHFLMLAMYSGQIG LIPVYLLVSMWGGKKRLYSATKFILYT
Sbjct: 121 RLFHFLMLAMYSGQIGLFSSRDLLLFFLMWELELIPVYLLVSMWGGKKRLYSATKFILYT 180
Query: 5 A 3
A
Sbjct: 181 A 181
>ref|YP_007507162.1| NADH dehydrogenase subunit 4 (chloroplast) [Salvia miltiorrhiza]
gi|401879793|gb|AFQ30980.1| NADH dehydrogenase subunit 4
(chloroplast) [Salvia miltiorrhiza]
Length = 509
Score = 288 bits (738), Expect = 2e-75
Identities = 143/181 (79%), Positives = 147/181 (81%)
Frame = -1
Query: 545 LAKVYLVFTMNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAF 366
+A+ YLVFT NHFPCLT+IVVLPIFAG LIFFLPHRGNRVIRWY TYAF
Sbjct: 1 MAQAYLVFTTNHFPCLTIIVVLPIFAGCLIFFLPHRGNRVIRWYTICMCILELLLTTYAF 60
Query: 365 CYHFQSDDPLIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS 186
CYHFQSDDPLIQL+EDYKWI F DFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS
Sbjct: 61 CYHFQSDDPLIQLIEDYKWILFLDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS 120
Query: 185 RLFHFLMLAMYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYT 6
RLFHFLMLAMYSGQIG LIPVYLLVSMWGGKKRLYSATKFILYT
Sbjct: 121 RLFHFLMLAMYSGQIGLFSSRDLLLFFLMWELELIPVYLLVSMWGGKKRLYSATKFILYT 180
Query: 5 A 3
A
Sbjct: 181 A 181
>ref|YP_007353965.1| NADH dehydrogenase subunit 4 (chloroplast) [Tectona grandis]
gi|438687654|emb|CCP47183.1| NADH dehydrogenase subunit
4 (chloroplast) [Tectona grandis]
gi|438688338|emb|CCP47272.1| NADH dehydrogenase subunit
4 (chloroplast) [Tectona grandis]
gi|438688462|emb|CCP47361.1| NADH dehydrogenase subunit
4 (chloroplast) [Tectona grandis]
Length = 500
Score = 284 bits (726), Expect = 4e-74
Identities = 140/172 (81%), Positives = 142/172 (82%)
Frame = -1
Query: 518 MNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAFCYHFQSDDP 339
MNHFPCLT+IVVLPIFAG LIFFLPHRGNRVIRWY TYAFCYHFQSDDP
Sbjct: 1 MNHFPCLTIIVVLPIFAGCLIFFLPHRGNRVIRWYTICMCILELLLTTYAFCYHFQSDDP 60
Query: 338 LIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 159
LIQL+EDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA
Sbjct: 61 LIQLMEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 120
Query: 158 MYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYTA 3
MYSGQIG LIPVYLLVSMWGGKKRLYSATKFILYTA
Sbjct: 121 MYSGQIGLFSSRDLLLFFLMWELELIPVYLLVSMWGGKKRLYSATKFILYTA 172
>prf||1211235CP NADH dehydrogenase 4-like ORF 509B
Length = 509
Score = 282 bits (722), Expect = 1e-73
Identities = 140/181 (77%), Positives = 147/181 (81%)
Frame = -1
Query: 545 LAKVYLVFTMNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAF 366
+ +VYLVFT N+FP LT+IVV PIFAGSLIFFLPH+GNRVIRWY TYAF
Sbjct: 1 MVQVYLVFTTNYFPWLTIIVVFPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAF 60
Query: 365 CYHFQSDDPLIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS 186
CYHFQSDDPLIQLVEDYKWI+FFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS
Sbjct: 61 CYHFQSDDPLIQLVEDYKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS 120
Query: 185 RLFHFLMLAMYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYT 6
RLFHFLMLAMYSGQIG LIPVYLL+ MWGGKKRLYSATKFILYT
Sbjct: 121 RLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYT 180
Query: 5 A 3
A
Sbjct: 181 A 181
>ref|YP_004935717.1| ndhD gene product (chloroplast) [Sesamum indicum]
gi|347448346|gb|AEO92757.1| NADH dehydrogenase subunit 4
(chloroplast) [Sesamum indicum]
Length = 500
Score = 280 bits (716), Expect = 6e-73
Identities = 139/172 (80%), Positives = 143/172 (83%)
Frame = -1
Query: 518 MNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAFCYHFQSDDP 339
MNHFPCLT+IVVLPIFAGSLIFFLPHRGNRVIRWY TYAFCYHFQSDDP
Sbjct: 1 MNHFPCLTIIVVLPIFAGSLIFFLPHRGNRVIRWYTISMCILELLLTTYAFCYHFQSDDP 60
Query: 338 LIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 159
LIQLVEDY+WI+FFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLF+FLMLA
Sbjct: 61 LIQLVEDYEWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFNFLMLA 120
Query: 158 MYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYTA 3
MYSGQIG LIPVYLLVSMWGGKKRLYSATKFILYTA
Sbjct: 121 MYSGQIGLFSSRDLLLFFLMWELELIPVYLLVSMWGGKKRLYSATKFILYTA 172
>ref|YP_003359409.1| NADH dehydrogenase subunit 4 (chloroplast) [Olea europaea]
gi|281428737|gb|ADA69976.1| NADH dehydrogenase subunit 4
(chloroplast) [Olea europaea]
Length = 509
Score = 278 bits (712), Expect = 2e-72
Identities = 141/181 (77%), Positives = 146/181 (80%)
Frame = -1
Query: 545 LAKVYLVFTMNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAF 366
+A+VYLVFT NHFP LT+IV+LPI AGSLIFFLPHRGNRVIRWY TYAF
Sbjct: 1 MAQVYLVFTTNHFPWLTIIVILPISAGSLIFFLPHRGNRVIRWYTICICILELLITTYAF 60
Query: 365 CYHFQSDDPLIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS 186
CYHFQS DPLIQLVEDYKWI FFDFHWRLGIDGLSIGPILLTGFITTLATLAA PVTRDS
Sbjct: 61 CYHFQSGDPLIQLVEDYKWIDFFDFHWRLGIDGLSIGPILLTGFITTLATLAARPVTRDS 120
Query: 185 RLFHFLMLAMYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYT 6
RLFHFLMLAMYSGQIG LIPVYLL+SMWGGKKRLYSATKFILYT
Sbjct: 121 RLFHFLMLAMYSGQIGLFSCRDLLLFFLMWELELIPVYLLLSMWGGKKRLYSATKFILYT 180
Query: 5 A 3
A
Sbjct: 181 A 181
>gb|AGL45386.1| NdhD (chloroplast) [Sesamum indicum]
Length = 501
Score = 278 bits (711), Expect = 2e-72
Identities = 138/171 (80%), Positives = 142/171 (83%)
Frame = -1
Query: 515 NHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAFCYHFQSDDPL 336
NHFPCLT+IVVLPIFAGSLIFFLPHRGNRVIRWY TYAFCYHFQSDDPL
Sbjct: 3 NHFPCLTIIVVLPIFAGSLIFFLPHRGNRVIRWYTISMCILELLLTTYAFCYHFQSDDPL 62
Query: 335 IQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM 156
IQLVEDY+WI+FFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLF+FLMLAM
Sbjct: 63 IQLVEDYEWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFNFLMLAM 122
Query: 155 YSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYTA 3
YSGQIG LIPVYLLVSMWGGKKRLYSATKFILYTA
Sbjct: 123 YSGQIGLFSSRDLLLFFLMWELELIPVYLLVSMWGGKKRLYSATKFILYTA 173
>ref|YP_004222696.1| NADH-plastoquinone oxidoreductase subunit 4 [Anthriscus cerefolium]
gi|289645625|gb|ADD13688.1| NADH-plastoquinone
oxidoreductase subunit 4 [Anthriscus cerefolium]
Length = 509
Score = 278 bits (711), Expect = 2e-72
Identities = 137/181 (75%), Positives = 146/181 (80%)
Frame = -1
Query: 545 LAKVYLVFTMNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAF 366
+ + YLVFT N FP LT+IV+LPIFAGS+IFF+PHRGNRVIRWY TYAF
Sbjct: 1 MVQAYLVFTTNFFPWLTIIVILPIFAGSVIFFIPHRGNRVIRWYTICICILELLLTTYAF 60
Query: 365 CYHFQSDDPLIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS 186
CYHFQ DDPLIQLVED+KWI+FFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS
Sbjct: 61 CYHFQLDDPLIQLVEDFKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDS 120
Query: 185 RLFHFLMLAMYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYT 6
RLFHFLMLAMYSGQIG LIPVYLL+SMWGGKKRLYSATKFILYT
Sbjct: 121 RLFHFLMLAMYSGQIGLFASRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT 180
Query: 5 A 3
A
Sbjct: 181 A 181
>ref|YP_007353821.1| NADH dehydrogenase subunit 4 (chloroplast) [Chrysanthemum x
morifolium] gi|452849105|ref|YP_007474783.1| NADH
dehydrogenase subunit 4 (chloroplast) [Chrysanthemum
indicum] gi|372863260|gb|AEX99332.1| NADH dehydrogenase
subunit 4 (chloroplast) [Chrysanthemum indicum]
gi|372863500|gb|AEX99569.1| NADH dehydrogenase subunit 4
(chloroplast) [Chrysanthemum indicum]
gi|375298891|gb|AFA45330.1| NADH dehydrogenase subunit 4
(chloroplast) [Chrysanthemum x morifolium]
Length = 512
Score = 276 bits (707), Expect = 7e-72
Identities = 137/182 (75%), Positives = 145/182 (79%)
Frame = -1
Query: 548 FLAKVYLVFTMNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYA 369
FL + YLVFT N FP LT+IVVLPIFAGSLIFFLPH+GNRVIRWY TY
Sbjct: 3 FLVQAYLVFTTNKFPWLTIIVVLPIFAGSLIFFLPHKGNRVIRWYTICICMLELLLTTYV 62
Query: 368 FCYHFQSDDPLIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRD 189
FCYHFQ DDPLIQLV+DYKWI+FFDF W+LGIDGLSIGP+LLTGFITTLATLAAWPVTRD
Sbjct: 63 FCYHFQLDDPLIQLVDDYKWINFFDFRWKLGIDGLSIGPVLLTGFITTLATLAAWPVTRD 122
Query: 188 SRLFHFLMLAMYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILY 9
SRLFHFLMLAMYSGQIG LIPVYLL+SMWGGKKRLYSATKFILY
Sbjct: 123 SRLFHFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILY 182
Query: 8 TA 3
TA
Sbjct: 183 TA 184
>ref|YP_007025957.1| NADH-plastoquinone oxidoreductase subunit 4 [Vaccinium macrocarpon]
gi|428697622|ref|YP_007025961.1| NADH-plastoquinone
oxidoreductase subunit 4 [Vaccinium macrocarpon]
gi|374093761|gb|AEY84197.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Vaccinium
macrocarpon] gi|374093765|gb|AEY84201.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Vaccinium macrocarpon]
gi|385198190|gb|AFI44108.1| NADH-plastoquinone
oxidoreductase subunit 4 [Vaccinium macrocarpon]
gi|385198194|gb|AFI44112.1| NADH-plastoquinone
oxidoreductase subunit 4 [Vaccinium macrocarpon]
Length = 506
Score = 274 bits (701), Expect = 4e-71
Identities = 137/178 (76%), Positives = 142/178 (79%)
Frame = -1
Query: 536 VYLVFTMNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAFCYH 357
+YLVFT N FP LT+IVVLPIFAG LI FLPHRGNR IRWY TYAFCYH
Sbjct: 1 MYLVFTTNFFPWLTIIVVLPIFAGFLIVFLPHRGNRAIRWYTLSTCILELLLTTYAFCYH 60
Query: 356 FQSDDPLIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLF 177
F+SDDPLIQLVEDYKWIHFF FHWRLGIDGLSIGPILLTGF+TTLATLAAWPVTRDSRLF
Sbjct: 61 FKSDDPLIQLVEDYKWIHFFYFHWRLGIDGLSIGPILLTGFVTTLATLAAWPVTRDSRLF 120
Query: 176 HFLMLAMYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYTA 3
HFLMLAMYSGQIG LIPVYLL+SMWGGKKRLYSATKFILYTA
Sbjct: 121 HFLMLAMYSGQIGSFSSRDLLLFFIMWEFELIPVYLLLSMWGGKKRLYSATKFILYTA 178
>gb|ADM92664.1| NADH-plastoquinone oxidoreductase subunit 4 [Franklinia alatamaha]
Length = 487
Score = 273 bits (697), Expect = 1e-70
Identities = 136/171 (79%), Positives = 139/171 (81%)
Frame = -1
Query: 515 NHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAFCYHFQSDDPL 336
N+FP LT+IVVLPIFAGSLIFFLPHRGNRVIRWY TY FCYHFQSDDPL
Sbjct: 2 NYFPWLTIIVVLPIFAGSLIFFLPHRGNRVIRWYTICICTLELLLTTYGFCYHFQSDDPL 61
Query: 335 IQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM 156
IQLVEDYKWI FFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM
Sbjct: 62 IQLVEDYKWIQFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAM 121
Query: 155 YSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYTA 3
YSGQIG LIPVYLL+SMWGGKKRLYSATKFILYTA
Sbjct: 122 YSGQIGSFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYTA 172
>gb|AFV61863.1| NADH dehydrogenase subunit 4 (chloroplast) [Origanum vulgare subsp.
vulgare]
Length = 500
Score = 272 bits (696), Expect = 1e-70
Identities = 134/172 (77%), Positives = 139/172 (80%)
Frame = -1
Query: 518 MNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAFCYHFQSDDP 339
MNHFPCLT+I VLPIFAG LIFFLPHRGNRVIRWY T+AFCYHFQSDDP
Sbjct: 1 MNHFPCLTIIAVLPIFAGCLIFFLPHRGNRVIRWYTICMCILELLLTTFAFCYHFQSDDP 60
Query: 338 LIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 159
LIQL+EDY+WI F DFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA
Sbjct: 61 LIQLMEDYQWILFLDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 120
Query: 158 MYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYTA 3
MYSGQ+G LIPVYLLVSMWGGKKRLYSATKFILYTA
Sbjct: 121 MYSGQVGLFSSRDLLLFFLMWELELIPVYLLVSMWGGKKRLYSATKFILYTA 172
>ref|NP_054557.2| NADH dehydrogenase subunit 4 [Nicotiana tabacum]
gi|78102598|ref|YP_358737.1| NADH dehydrogenase subunit
4 [Nicotiana sylvestris]
gi|2506938|sp|P06262.2|NU4C_TOBAC RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|122213588|sp|Q3C1Q4.1|NU4C_NICSY RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|77799625|dbj|BAE46714.1| NADH dehydrogenase
ND4 subunit [Nicotiana sylvestris]
Length = 500
Score = 272 bits (695), Expect = 2e-70
Identities = 135/172 (78%), Positives = 140/172 (81%)
Frame = -1
Query: 518 MNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAFCYHFQSDDP 339
MN+FP LT+IVV PIFAGSLIFFLPH+GNRVIRWY TYAFCYHFQSDDP
Sbjct: 1 MNYFPWLTIIVVFPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFCYHFQSDDP 60
Query: 338 LIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 159
LIQLVEDYKWI+FFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA
Sbjct: 61 LIQLVEDYKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 120
Query: 158 MYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYTA 3
MYSGQIG LIPVYLL+ MWGGKKRLYSATKFILYTA
Sbjct: 121 MYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYTA 172
>ref|YP_008964083.1| NADH dehydrogenase subunit 4 [Ajuga reptans]
gi|558697138|gb|AHA84893.1| NADH dehydrogenase subunit 4
[Ajuga reptans]
Length = 500
Score = 272 bits (695), Expect = 2e-70
Identities = 136/172 (79%), Positives = 139/172 (80%)
Frame = -1
Query: 518 MNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAFCYHFQSDDP 339
MNHF CLT+IVVLPIFAG LIFFLPH+GNR IR Y TYAFCYHFQSDDP
Sbjct: 1 MNHFSCLTIIVVLPIFAGCLIFFLPHKGNREIRSYTICICILELLLTTYAFCYHFQSDDP 60
Query: 338 LIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 159
LIQL+EDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA
Sbjct: 61 LIQLMEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 120
Query: 158 MYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYTA 3
MYSGQIG LIPVYLLVSMWGGKKRLYSATKFILYTA
Sbjct: 121 MYSGQIGLFSSRDLLLFFLMWELELIPVYLLVSMWGGKKRLYSATKFILYTA 172
>sp|Q2VED0.1|NU4C_SOLTU RecName: Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|82754674|gb|ABB90088.1| NADH dehydrogenase
subunit 4 [Solanum tuberosum]
Length = 500
Score = 272 bits (695), Expect = 2e-70
Identities = 135/172 (78%), Positives = 140/172 (81%)
Frame = -1
Query: 518 MNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAFCYHFQSDDP 339
MN+FP LT+IVV PIFAGSLIFFLPH+GNRVIRWY TYAFCYHFQSDDP
Sbjct: 1 MNYFPWLTIIVVFPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFCYHFQSDDP 60
Query: 338 LIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 159
LIQLVEDYKWI FFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA
Sbjct: 61 LIQLVEDYKWIDFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 120
Query: 158 MYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYTA 3
MYSGQIG LIPVYLL++MWGGKKRLYSATKFILYTA
Sbjct: 121 MYSGQIGSFSSRDLLLFFIMWELELIPVYLLLAMWGGKKRLYSATKFILYTA 172
>ref|YP_004891666.1| ndhD gene product (chloroplast) [Nicotiana undulata]
gi|347453966|gb|AEO95624.1| NADH dehydrogenase subunit 4
(chloroplast) [Nicotiana undulata]
gi|347454076|gb|AEO95733.1| NADH dehydrogenase subunit 4
[synthetic construct]
Length = 500
Score = 272 bits (695), Expect = 2e-70
Identities = 135/172 (78%), Positives = 140/172 (81%)
Frame = -1
Query: 518 MNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAFCYHFQSDDP 339
MN+FP LT+IVV PIFAGSLIFFLPH+GNRVIRWY TYAFCYHFQSDDP
Sbjct: 1 MNYFPWLTIIVVFPIFAGSLIFFLPHKGNRVIRWYTICICILELLLTTYAFCYHFQSDDP 60
Query: 338 LIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 159
LIQLVEDYKWI+FFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA
Sbjct: 61 LIQLVEDYKWINFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLA 120
Query: 158 MYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYTA 3
MYSGQIG LIPVYLL+ MWGGKKRLYSATKFILYTA
Sbjct: 121 MYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYTA 172
>ref|YP_004465243.1| NADH-plastoquinone oxidoreductase subunit 4 [Jacobaea vulgaris]
gi|308156139|gb|ADO15467.1| NADH-plastoquinone
oxidoreductase subunit 4 [Jacobaea vulgaris]
Length = 506
Score = 272 bits (695), Expect = 2e-70
Identities = 135/178 (75%), Positives = 142/178 (79%)
Frame = -1
Query: 536 VYLVFTMNHFPCLTLIVVLPIFAGSLIFFLPHRGNRVIRWYXXXXXXXXXXXXTYAFCYH 357
+YLVFT N+FP LT+IVVLPIFAGSLIFFLPH+GNR IRWY TYAFCYH
Sbjct: 1 MYLVFTTNNFPWLTIIVVLPIFAGSLIFFLPHKGNRTIRWYTICICMLELLLTTYAFCYH 60
Query: 356 FQSDDPLIQLVEDYKWIHFFDFHWRLGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLF 177
FQ DDPLIQLVEDYKWI FFDF W+LGIDGLSIGP+LLTGFITTLATLAAWPVTRDSRLF
Sbjct: 61 FQFDDPLIQLVEDYKWISFFDFRWKLGIDGLSIGPVLLTGFITTLATLAAWPVTRDSRLF 120
Query: 176 HFLMLAMYSGQIGXXXXXXXXXXXXXXXXXLIPVYLLVSMWGGKKRLYSATKFILYTA 3
HFLMLAMYSGQIG LIPVYLL+ MWGGKKRLYSATKFILYTA
Sbjct: 121 HFLMLAMYSGQIGSFSSRDLLLFFIMWELELIPVYLLLCMWGGKKRLYSATKFILYTA 178