BLASTX nr result
ID: Rehmannia26_contig00024370
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00024370
(520 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008815995.1| Ycf1 (chloroplast) [Lindenbergia philippensi... 131 1e-28
ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]... 130 2e-28
ref|YP_004935725.1| ycf1 gene product (chloroplast) [Sesamum ind... 129 5e-28
emb|CCQ71680.1| Ycf1 (chloroplast) [Salvia miltiorrhiza] 120 1e-25
emb|CCQ71668.1| Ycf1 (chloroplast) [Salvia miltiorrhiza] 120 1e-25
ref|YP_007507170.1| photosystem I assembly protein Ycf1 (chlorop... 120 1e-25
gb|AFV61871.1| Ycf1 (chloroplast) [Origanum vulgare subsp. vulgare] 119 3e-25
ref|YP_008964091.1| hypothetical chloroplast RF1 [Ajuga reptans]... 114 2e-23
emb|CBR23797.1| Ycf1 protein [Olea europaea subsp. cuspidata] 107 1e-21
ref|YP_004563839.1| Ycf1 protein [Olea europaea subsp. cuspidata... 107 1e-21
ref|YP_004564555.1| Ycf1 protein [Olea europaea subsp. maroccana... 107 1e-21
emb|CBR30467.1| Ycf1 protein [Olea europaea subsp. europaea] 107 1e-21
emb|CBR23889.1| Ycf1 protein [Olea europaea subsp. cuspidata] 107 1e-21
ref|YP_004376479.1| Ycf1 protein [Olea europaea subsp. europaea]... 107 1e-21
ref|YP_003359417.2| Ycf1 (chloroplast) [Olea europaea] gi|291059... 107 1e-21
ref|YP_003359405.1| Ycf1 (chloroplast) [Olea europaea] gi|330850... 107 1e-21
ref|YP_004564062.1| Ycf1 protein [Olea woodiana subsp. woodiana]... 105 8e-21
ref|YP_004564050.1| Ycf1 protein [Olea woodiana subsp. woodiana]... 105 8e-21
gb|AEK71769.1| hypothetical chloroplast RF1 [Nerium oleander] 91 2e-16
gb|AEK71605.1| hypothetical chloroplast RF1 [Ehretia acuminata] 91 2e-16
>ref|YP_008815995.1| Ycf1 (chloroplast) [Lindenbergia philippensis]
gi|557136922|emb|CDI43976.1| Ycf1 (chloroplast)
[Lindenbergia philippensis]
Length = 1871
Score = 131 bits (329), Expect = 1e-28
Identities = 64/84 (76%), Positives = 69/84 (82%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFHFRFTETGYKK 267
AS+MKGTKQEQEG KA+PNKIDETEEIRVNGKEDEFHFRFTETGYKK
Sbjct: 270 ASKMKGTKQEQEGSTEEDPSPSFFSEEKANPNKIDETEEIRVNGKEDEFHFRFTETGYKK 329
Query: 268 RPVSEESYLMNVNENYDNSRFKNF 339
RPVSEESYLMN+NEN++NSRFK F
Sbjct: 330 RPVSEESYLMNINENHENSRFKIF 353
>ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]
gi|438687662|emb|CCP47191.1| YCF1 protein (chloroplast)
[Tectona grandis] gi|438688346|emb|CCP47280.1| YCF1
protein (chloroplast) [Tectona grandis]
gi|438688470|emb|CCP47369.1| YCF1 protein (chloroplast)
[Tectona grandis]
Length = 1898
Score = 130 bits (326), Expect = 2e-28
Identities = 64/84 (76%), Positives = 67/84 (79%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFHFRFTETGYKK 267
ASEMKGTKQEQEG KADPNKIDETEEIRVNGKE+EFHFRFTETGYK
Sbjct: 309 ASEMKGTKQEQEGSTEEDPSPSFFLEEKADPNKIDETEEIRVNGKENEFHFRFTETGYKN 368
Query: 268 RPVSEESYLMNVNENYDNSRFKNF 339
RPVSEESYLMN+NE+ DNSRFK F
Sbjct: 369 RPVSEESYLMNINESRDNSRFKKF 392
>ref|YP_004935725.1| ycf1 gene product (chloroplast) [Sesamum indicum]
gi|347448354|gb|AEO92765.1| ycf1 protein (chloroplast)
[Sesamum indicum] gi|496538659|gb|AGL45394.1| Ycf1
(chloroplast) [Sesamum indicum]
Length = 1789
Score = 129 bits (323), Expect = 5e-28
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFHFRFTETGYKK 267
ASEMKGTKQEQEG KADPNKIDETEEIRVNGKEDEFHFRFTETGYK
Sbjct: 276 ASEMKGTKQEQEGSTEEDPSFFSEG--KADPNKIDETEEIRVNGKEDEFHFRFTETGYKN 333
Query: 268 RPVSEESYLMNVNENYDNSRFKNF 339
RPVS+ESYLMN+NEN+DNSRFK F
Sbjct: 334 RPVSQESYLMNINENHDNSRFKIF 357
>emb|CCQ71680.1| Ycf1 (chloroplast) [Salvia miltiorrhiza]
Length = 1838
Score = 120 bits (302), Expect = 1e-25
Identities = 60/82 (73%), Positives = 64/82 (78%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFHFRFTETGYKK 267
ASEMKGTKQEQEG KADPNKID+TEEIRVNGKE+EFHFRFTET K
Sbjct: 262 ASEMKGTKQEQEGSTEEDPSPSFFSEEKADPNKIDKTEEIRVNGKENEFHFRFTETDSKN 321
Query: 268 RPVSEESYLMNVNENYDNSRFK 333
RPVSEESYLMN+NEN +NSRFK
Sbjct: 322 RPVSEESYLMNINENQENSRFK 343
>emb|CCQ71668.1| Ycf1 (chloroplast) [Salvia miltiorrhiza]
Length = 385
Score = 120 bits (302), Expect = 1e-25
Identities = 60/82 (73%), Positives = 64/82 (78%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFHFRFTETGYKK 267
ASEMKGTKQEQEG KADPNKID+TEEIRVNGKE+EFHFRFTET K
Sbjct: 262 ASEMKGTKQEQEGSTEEDPSPSFFSEEKADPNKIDKTEEIRVNGKENEFHFRFTETDSKN 321
Query: 268 RPVSEESYLMNVNENYDNSRFK 333
RPVSEESYLMN+NEN +NSRFK
Sbjct: 322 RPVSEESYLMNINENQENSRFK 343
>ref|YP_007507170.1| photosystem I assembly protein Ycf1 (chloroplast) [Salvia
miltiorrhiza] gi|401879801|gb|AFQ30988.1| photosystem I
assembly protein Ycf1 (chloroplast) [Salvia
miltiorrhiza]
Length = 1838
Score = 120 bits (302), Expect = 1e-25
Identities = 60/82 (73%), Positives = 64/82 (78%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFHFRFTETGYKK 267
ASEMKGTKQEQEG KADPNKID+TEEIRVNGKE+EFHFRFTET K
Sbjct: 262 ASEMKGTKQEQEGSTEEDPSPSFFSEEKADPNKIDKTEEIRVNGKENEFHFRFTETDSKN 321
Query: 268 RPVSEESYLMNVNENYDNSRFK 333
RPVSEESYLMN+NEN +NSRFK
Sbjct: 322 RPVSEESYLMNINENQENSRFK 343
>gb|AFV61871.1| Ycf1 (chloroplast) [Origanum vulgare subsp. vulgare]
Length = 1835
Score = 119 bits (299), Expect = 3e-25
Identities = 61/84 (72%), Positives = 64/84 (76%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFHFRFTETGYKK 267
ASEMKGTKQEQEG KAD NKIDETEEIRVNGKEDEF+F+FTET K
Sbjct: 262 ASEMKGTKQEQEGSEKEDPSPSFFSEEKADLNKIDETEEIRVNGKEDEFYFQFTETANKN 321
Query: 268 RPVSEESYLMNVNENYDNSRFKNF 339
RPVSEESYLMN+NEN DNSRFK F
Sbjct: 322 RPVSEESYLMNINENQDNSRFKIF 345
>ref|YP_008964091.1| hypothetical chloroplast RF1 [Ajuga reptans]
gi|558697198|gb|AHA84953.1| hypothetical chloroplast RF1
[Ajuga reptans]
Length = 1801
Score = 114 bits (284), Expect = 2e-23
Identities = 58/86 (67%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKEDEFHFR--FTETGY 261
ASE KG KQEQEG K DPNKIDETEEIRVNGKE+EF+FR FTETGY
Sbjct: 267 ASEKKGAKQEQEGSTEEDPSLSFFLEEKGDPNKIDETEEIRVNGKENEFNFRFTFTETGY 326
Query: 262 KKRPVSEESYLMNVNENYDNSRFKNF 339
+ RP+SEESYLMN+NEN +NSRFK F
Sbjct: 327 QNRPISEESYLMNINENRENSRFKIF 352
>emb|CBR23797.1| Ycf1 protein [Olea europaea subsp. cuspidata]
Length = 1876
Score = 107 bits (268), Expect = 1e-21
Identities = 56/85 (65%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEFHFRFTETG 258
A EMKGTKQEQE K DPNKIDETEEIRVNGKE DEFHFR TETG
Sbjct: 269 AYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEFHFRLTETG 328
Query: 259 YKKRPVSEESYLMNVNENYDNSRFK 333
K PV E+SYLMN+NEN+DNS+FK
Sbjct: 329 SKNSPVYEDSYLMNINENHDNSKFK 353
>ref|YP_004563839.1| Ycf1 protein [Olea europaea subsp. cuspidata]
gi|334085008|emb|CBJ04356.1| Ycf1 protein [Olea europaea
subsp. cuspidata]
Length = 1876
Score = 107 bits (268), Expect = 1e-21
Identities = 56/85 (65%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEFHFRFTETG 258
A EMKGTKQEQE K DPNKIDETEEIRVNGKE DEFHFR TETG
Sbjct: 269 AYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEFHFRLTETG 328
Query: 259 YKKRPVSEESYLMNVNENYDNSRFK 333
K PV E+SYLMN+NEN+DNS+FK
Sbjct: 329 SKNSPVYEDSYLMNINENHDNSKFK 353
>ref|YP_004564555.1| Ycf1 protein [Olea europaea subsp. maroccana]
gi|334084922|emb|CBS29308.1| Ycf1 protein [Olea europaea
subsp. maroccana]
Length = 1876
Score = 107 bits (268), Expect = 1e-21
Identities = 56/85 (65%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEFHFRFTETG 258
A EMKGTKQEQE K DPNKIDETEEIRVNGKE DEFHFR TETG
Sbjct: 269 AYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEFHFRLTETG 328
Query: 259 YKKRPVSEESYLMNVNENYDNSRFK 333
K PV E+SYLMN+NEN+DNS+FK
Sbjct: 329 SKNSPVYEDSYLMNINENHDNSKFK 353
>emb|CBR30467.1| Ycf1 protein [Olea europaea subsp. europaea]
Length = 1801
Score = 107 bits (268), Expect = 1e-21
Identities = 56/85 (65%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEFHFRFTETG 258
A EMKGTKQEQE K DPNKIDETEEIRVNGKE DEFHFR TETG
Sbjct: 269 AYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEFHFRLTETG 328
Query: 259 YKKRPVSEESYLMNVNENYDNSRFK 333
K PV E+SYLMN+NEN+DNS+FK
Sbjct: 329 SKNSPVYEDSYLMNINENHDNSKFK 353
>emb|CBR23889.1| Ycf1 protein [Olea europaea subsp. cuspidata]
Length = 1876
Score = 107 bits (268), Expect = 1e-21
Identities = 56/85 (65%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEFHFRFTETG 258
A EMKGTKQEQE K DPNKIDETEEIRVNGKE DEFHFR TETG
Sbjct: 269 AYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEFHFRLTETG 328
Query: 259 YKKRPVSEESYLMNVNENYDNSRFK 333
K PV E+SYLMN+NEN+DNS+FK
Sbjct: 329 SKNSPVYEDSYLMNINENHDNSKFK 353
>ref|YP_004376479.1| Ycf1 protein [Olea europaea subsp. europaea]
gi|328795491|emb|CBR30373.1| Ycf1 protein [Olea europaea
subsp. europaea]
Length = 1876
Score = 107 bits (268), Expect = 1e-21
Identities = 56/85 (65%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEFHFRFTETG 258
A EMKGTKQEQE K DPNKIDETEEIRVNGKE DEFHFR TETG
Sbjct: 269 AYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEFHFRLTETG 328
Query: 259 YKKRPVSEESYLMNVNENYDNSRFK 333
K PV E+SYLMN+NEN+DNS+FK
Sbjct: 329 SKNSPVYEDSYLMNINENHDNSKFK 353
>ref|YP_003359417.2| Ycf1 (chloroplast) [Olea europaea] gi|291059312|gb|ADD72148.1| YCF1
protein [Olea europaea] gi|334084545|emb|CBR24683.1|
Ycf1 protein [Olea europaea subsp. europaea]
gi|363413092|gb|ADA69984.2| Ycf1 (chloroplast) [Olea
europaea] gi|510934462|emb|CCQ09160.1| Ycf1 protein
(chloroplast) [Olea europaea subsp. europaea]
Length = 1876
Score = 107 bits (268), Expect = 1e-21
Identities = 56/85 (65%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEFHFRFTETG 258
A EMKGTKQEQE K DPNKIDETEEIRVNGKE DEFHFR TETG
Sbjct: 269 AYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEFHFRLTETG 328
Query: 259 YKKRPVSEESYLMNVNENYDNSRFK 333
K PV E+SYLMN+NEN+DNS+FK
Sbjct: 329 SKNSPVYEDSYLMNINENHDNSKFK 353
>ref|YP_003359405.1| Ycf1 (chloroplast) [Olea europaea] gi|330850789|ref|YP_004376467.1|
Ycf1 protein [Olea europaea subsp. europaea]
gi|334700328|ref|YP_004563827.1| Ycf1 protein [Olea
europaea subsp. cuspidata]
gi|334701934|ref|YP_004564543.1| Ycf1 protein [Olea
europaea subsp. maroccana] gi|281428733|gb|ADA69972.1|
Ycf1 (chloroplast) [Olea europaea]
gi|328795479|emb|CBR30361.1| Ycf1 protein [Olea europaea
subsp. europaea] gi|334084447|emb|CBR23877.1| Ycf1
protein [Olea europaea subsp. cuspidata]
gi|334084533|emb|CBR24671.1| Ycf1 protein [Olea europaea
subsp. europaea] gi|334084619|emb|CBR30454.1| Ycf1
protein [Olea europaea subsp. europaea]
gi|334084910|emb|CBS29295.1| Ycf1 protein [Olea europaea
subsp. maroccana] gi|334084996|emb|CBJ04344.1| Ycf1
protein [Olea europaea subsp. cuspidata]
gi|334085082|emb|CBR23785.1| Ycf1 protein [Olea europaea
subsp. cuspidata] gi|510934450|emb|CCQ09148.1| Ycf1
protein (chloroplast) [Olea europaea subsp. europaea]
Length = 387
Score = 107 bits (268), Expect = 1e-21
Identities = 56/85 (65%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEFHFRFTETG 258
A EMKGTKQEQE K DPNKIDETEEIRVNGKE DEFHFR TETG
Sbjct: 269 AYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEFHFRLTETG 328
Query: 259 YKKRPVSEESYLMNVNENYDNSRFK 333
K PV E+SYLMN+NEN+DNS+FK
Sbjct: 329 SKNSPVYEDSYLMNINENHDNSKFK 353
>ref|YP_004564062.1| Ycf1 protein [Olea woodiana subsp. woodiana]
gi|334084717|emb|CBS29411.1| Ycf1 protein [Olea woodiana
subsp. woodiana]
Length = 1876
Score = 105 bits (261), Expect = 8e-21
Identities = 55/85 (64%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEFHFRFTETG 258
A EMKGTKQEQE K DPNKIDETEEIRVNGKE DEF+FR TETG
Sbjct: 269 AYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEFNFRLTETG 328
Query: 259 YKKRPVSEESYLMNVNENYDNSRFK 333
K PV E+SYLMN+NEN+DNS+FK
Sbjct: 329 SKNSPVYEDSYLMNINENHDNSKFK 353
>ref|YP_004564050.1| Ycf1 protein [Olea woodiana subsp. woodiana]
gi|334084705|emb|CBS29398.1| Ycf1 protein [Olea woodiana
subsp. woodiana]
Length = 387
Score = 105 bits (261), Expect = 8e-21
Identities = 55/85 (64%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEFHFRFTETG 258
A EMKGTKQEQE K DPNKIDETEEIRVNGKE DEF+FR TETG
Sbjct: 269 AYEMKGTKQEQERSAEEDPSPSFFSEEKEDPNKIDETEEIRVNGKEKTQDEFNFRLTETG 328
Query: 259 YKKRPVSEESYLMNVNENYDNSRFK 333
K PV E+SYLMN+NEN+DNS+FK
Sbjct: 329 SKNSPVYEDSYLMNINENHDNSKFK 353
>gb|AEK71769.1| hypothetical chloroplast RF1 [Nerium oleander]
Length = 354
Score = 90.9 bits (224), Expect = 2e-16
Identities = 51/84 (60%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +1
Query: 91 SEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEFHFRFTETGY 261
SEMKG KQEQEG + DP+KIDETEEIRVNGKE DEF F FTETGY
Sbjct: 270 SEMKGIKQEQEGSTEEDPSSSLFSEEREDPDKIDETEEIRVNGKEKTKDEFDFHFTETGY 329
Query: 262 KKRPVSEESYLMNVNENYDNSRFK 333
K PVSE+SYL N N N +NS K
Sbjct: 330 NKSPVSEDSYL-NRNANQENSNKK 352
>gb|AEK71605.1| hypothetical chloroplast RF1 [Ehretia acuminata]
Length = 351
Score = 90.9 bits (224), Expect = 2e-16
Identities = 52/85 (61%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = +1
Query: 88 ASEMKGTKQEQEGXXXXXXXXXXXXXXKADPNKIDETEEIRVNGKE---DEFHFRFTETG 258
ASEMKG KQEQEG K DP+KIDETEEIRVNGKE DEFH F ETG
Sbjct: 266 ASEMKGIKQEQEGSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFH--FPETG 323
Query: 259 YKKRPVSEESYLMNVNENYDNSRFK 333
Y PVSE+SYL N+N N +NS+FK
Sbjct: 324 YNNSPVSEDSYL-NMNGNQENSKFK 347