BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00024163
         (598 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   120   2e-25
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   120   3e-25
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   118   1e-24
ref|XP_002308049.1| predicted protein [Populus trichocarpa]           116   4e-24
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]   116   5e-24
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   108   8e-22
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...   107   2e-21
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise...   107   3e-21
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...   106   4e-21
gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus...   103   3e-20
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   101   1e-19
gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Th...   100   3e-19
gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Th...   100   3e-19
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              100   4e-19
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...    99   1e-18
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...    98   2e-18
gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus...    94   3e-17
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...    94   3e-17
ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I sub...    88   2e-15
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    87   3e-15

>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
           tuberosum]
          Length = 1675

 Score =  120 bits (302), Expect = 2e-25
 Identities = 74/185 (40%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           FR+SR EV+ CVS+LELI KG+ V AK       ++D    +      D E++ GSH S 
Sbjct: 105 FRASRAEVEKCVSELELIAKGDVVGAK-------MIDALSPD---NSTDREESEGSHMSC 154

Query: 414 STVFSDGENHYE-DKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWF 238
           +    + ++H E +K+  WD+ Q  EAM+V++  LK K  KC NC+  NPKI KP+FG F
Sbjct: 155 AMDDLNMQDHREYNKRPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRF 214

Query: 237 HVNRLANTEIRSNSIRSS-RLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTA 61
           H++ ++N +IR N I S  R ++  +GG E+ PS EVVNA+     +  G AE +  +T+
Sbjct: 215 HMD-ISNKQIRENYINSGRRFNLHDTGGSEENPSPEVVNAT-----EPLGEAETSLCVTS 268

Query: 60  SDSTK 46
           +D  +
Sbjct: 269 TDGVE 273


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
           lycopersicum]
          Length = 1677

 Score =  120 bits (301), Expect = 3e-25
 Identities = 77/194 (39%), Positives = 114/194 (58%), Gaps = 2/194 (1%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           FR+SR EV+ CVS+LELI KG+ V AK       ++D    +      D E++ GSH S 
Sbjct: 105 FRASRAEVEKCVSELELIAKGDVVGAK-------MIDALSPD---NSTDREESEGSHMSC 154

Query: 414 STVFSDGENHYE-DKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWF 238
           +    +  +H E +K+  WD+ Q  EAM+V++  LK K  KC NC+  NPKI KP+FG F
Sbjct: 155 TMDDLNVRDHCEYNKRPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRF 214

Query: 237 HVNRLANTEIRSNSIRSS-RLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTA 61
           H++ ++N +IR N I S  R ++  +GG E+ PS EVVNA+     +  G AE +  +T+
Sbjct: 215 HMD-ISNKQIRENYINSGRRFNLHDTGGSEENPSPEVVNAT-----EPLGEAETSLCVTS 268

Query: 60  SDSTKKPSKKDAKR 19
           +D  +  + K  KR
Sbjct: 269 TDGVE--NSKGRKR 280


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
           vinifera]
          Length = 1740

 Score =  118 bits (296), Expect = 1e-24
 Identities = 79/200 (39%), Positives = 111/200 (55%), Gaps = 9/200 (4%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTS- 418
           F++S   V   VSQLELI KG+ V AK L      +   +  +       ED+ GSH S 
Sbjct: 159 FKTSSSLVQKYVSQLELISKGDVVGAKNL----DSISPSESSYP------EDSDGSHVSC 208

Query: 417 DSTVFSDGENHYED--KQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFG 244
            STV S   ++     KQ  W S Q  EAMSV++ FLK K R C+NC+  +P++ KPTFG
Sbjct: 209 SSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFG 268

Query: 243 WFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASD-YSWKDDSGTAEANSFL 67
           WFH+  L++ + R+N IR S+L+   S   E+K SSEV N +D + W D   T E +S +
Sbjct: 269 WFHMAGLSDAQTRANVIRGSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSI 328

Query: 66  TASDS-----TKKPSKKDAK 22
             +D      TK+  +K A+
Sbjct: 329 APTDGIQDTVTKRLERKGAQ 348


>ref|XP_002308049.1| predicted protein [Populus trichocarpa]
          Length = 1168

 Score =  116 bits (291), Expect = 4e-24
 Identities = 73/192 (38%), Positives = 100/192 (52%), Gaps = 2/192 (1%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           FR+   +V+  VSQLELI+KG+ V AK+L           +E +L     ED+ GS  S 
Sbjct: 108 FRADSNQVEKFVSQLELIIKGDVVGAKRLD------SFSPIEASLP----EDSDGSSESC 157

Query: 414 STVFSDGE--NHYEDKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGW 241
           ST+ S     N+ + KQ+ W S QL+EAMS+LN FLK + +KC+NC   NP I KPTFGW
Sbjct: 158 STIHSGARHPNNEQSKQSEWTSLQLSEAMSILNNFLKLESKKCKNCSASNPNIRKPTFGW 217

Query: 240 FHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTA 61
           FH   L+N  IRSN I+   ++    G  E+                          + A
Sbjct: 218 FHWAGLSNAAIRSNLIKQQTIEGPFGGAFEE-------------------------LIDA 252

Query: 60  SDSTKKPSKKDA 25
            D+TK PS K++
Sbjct: 253 EDATKSPSNKES 264


>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score =  116 bits (290), Expect = 5e-24
 Identities = 75/190 (39%), Positives = 105/190 (55%), Gaps = 4/190 (2%)
 Frame = -2

Query: 576 EVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTS-DSTVFS 400
           +V   VSQLELI KG+ V AK L      +   +  +       ED+ GSH S  STV S
Sbjct: 185 QVQKYVSQLELISKGDVVGAKNL----DSISPSESSYP------EDSDGSHVSCSSTVNS 234

Query: 399 DGENHYED--KQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFHVNR 226
              ++     KQ  W S Q  EAMSV++ FLK K R C+NC+  +P++ KPTFGWFH+  
Sbjct: 235 SARDNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAG 294

Query: 225 LANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASD-YSWKDDSGTAEANSFLTASDST 49
           L++ + R+N IR S+L+   S   E+K SSEV N +D + W D   T E +S +  +D  
Sbjct: 295 LSDAQTRANVIRGSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGI 354

Query: 48  KKPSKKDAKR 19
           +    K  +R
Sbjct: 355 QDTVTKXLER 364


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
           communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
           polymerase I largest subunit, putative [Ricinus
           communis]
          Length = 1686

 Score =  108 bits (271), Expect = 8e-22
 Identities = 76/198 (38%), Positives = 103/198 (52%), Gaps = 5/198 (2%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           FR  R +V+ C+ QLELIVKG+ V AK+L   +S+          E +  E++  SH S 
Sbjct: 113 FRMQRGQVEKCIKQLELIVKGDIVGAKRL---ESVSPS-------EALYPEESDLSHESC 162

Query: 414 STVFS-----DGENHYEDKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPT 250
            T+ S     DGE+    +Q  W S Q  EAMSVLN FLK K +KC+NCE  NP I KPT
Sbjct: 163 PTIHSGVQCNDGEH---TRQQGWTSLQFTEAMSVLNNFLKPKFKKCKNCESSNPNITKPT 219

Query: 249 FGWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSF 70
           FGWFH + +++  IR+N I   +L     GG      SE+   +D     + G   +   
Sbjct: 220 FGWFHTSGMSDASIRANVITGHQL-----GG---LLGSEIEGTTDVEDAAEPGDQHS--- 268

Query: 69  LTASDSTKKPSKKDAKRI 16
                 TKK  KK+ K +
Sbjct: 269 -----GTKKHKKKERKEV 281


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
           gi|557523327|gb|ESR34694.1| hypothetical protein
           CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score =  107 bits (268), Expect = 2e-21
 Identities = 70/187 (37%), Positives = 99/187 (52%), Gaps = 4/187 (2%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           F++SRREV+ CV +LELI+KG+ + AK L L          +   E  + ED+  S+ S 
Sbjct: 110 FKASRREVEKCVRKLELIIKGDIIAAKSLDL----------DLPSESSNPEDSDVSNKSS 159

Query: 414 STVFSDGENHYED----KQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTF 247
            ++ +   N Y++    K   W S Q AEA   L +FLK +  KC NC+  NP+I+KPTF
Sbjct: 160 CSMVTPRGN-YDNVRNLKPQEWTSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTF 218

Query: 246 GWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFL 67
           GW H+N + + +IR+N IR   L  T SGG E+K         D     D    E +SF 
Sbjct: 219 GWIHMNGMPHADIRANLIRGCNLGETFSGGEEEK---------DLGTSSDVDAPETHSFN 269

Query: 66  TASDSTK 46
            A   T+
Sbjct: 270 GAFPGTQ 276


>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
          Length = 1626

 Score =  107 bits (266), Expect = 3e-21
 Identities = 70/196 (35%), Positives = 97/196 (49%), Gaps = 1/196 (0%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           F+  R EV+ CVSQL LI KG+   A++L                 +  L DN+GSH++ 
Sbjct: 103 FKVGRLEVETCVSQLHLIRKGDIAGARRLR---------------SLGGLSDNQGSHSTG 147

Query: 414 STVFSDGENHYEDKQA-FWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWF 238
           S V S+ E+  +      WDS QL EAM VLNEF ++K +KC+NCE  +PKI  P FGWF
Sbjct: 148 SVVLSESESGQDLNWCRSWDSIQLTEAMGVLNEFFRKKEKKCKNCESRSPKITNPIFGWF 207

Query: 237 HVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTAS 58
           +            +I  S    TH   G+DKPS E               +EA+S + ++
Sbjct: 208 YA---------VYAIHRSSSKGTHIREGKDKPSPE--------------NSEASSSIISA 244

Query: 57  DSTKKPSKKDAKRIKI 10
           DS     KK +   K+
Sbjct: 245 DSPGNSGKKGSSSNKL 260


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
           sinensis]
          Length = 1715

 Score =  106 bits (265), Expect = 4e-21
 Identities = 63/154 (40%), Positives = 90/154 (58%), Gaps = 4/154 (2%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           F++SRREV+ CV +LELI+KG+ + AK L L          +   E  + ED+  S+ S 
Sbjct: 110 FKASRREVEKCVRKLELIIKGDIIAAKSLDL----------DLPSESSNPEDSDVSNKSS 159

Query: 414 STVFSDGENHYED----KQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTF 247
            ++ +   N Y++    K   W S Q AEA   L +FLK +  KC NC+  NP+I+KPTF
Sbjct: 160 CSMVTPRGN-YDNVRNLKPQEWTSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTF 218

Query: 246 GWFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDK 145
           GW H+N + + +IR+N IR   L  T SGG E+K
Sbjct: 219 GWIHMNGMPHADIRANLIRGCNLGETFSGGEEEK 252


>gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score =  103 bits (258), Expect = 3e-20
 Identities = 66/184 (35%), Positives = 98/184 (53%), Gaps = 4/184 (2%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           F +SR+EV+   SQ ELI+KG+ + AK L                 I+  E N      +
Sbjct: 110 FHASRKEVEMRTSQFELIMKGDIIRAKSLD---------------SIISDESNHSGDGDE 154

Query: 414 ST-VFSDGENHYEDKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWF 238
           S  V   GEN        W S Q +EAMSVL +FL RK +KC+NC  +NP+I+KPTFGWF
Sbjct: 155 SQGVEQLGEN--------WSSLQFSEAMSVLRKFLLRKYKKCQNCGVVNPRISKPTFGWF 206

Query: 237 HVNRLANTEIRSNSIR---SSRLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFL 67
           H+N L++ E R+N++R   S  ++   S GG +    E + ++  + +D     + +S L
Sbjct: 207 HMNVLSDDEARANTMRALESETINDDMSLGGGETTEEEDITSTGTAKRDKRKKGKLSSKL 266

Query: 66  TASD 55
            A +
Sbjct: 267 AAQN 270


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
           max]
          Length = 1651

 Score =  101 bits (252), Expect = 1e-19
 Identities = 60/162 (37%), Positives = 91/162 (56%), Gaps = 4/162 (2%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           FR+  +EVD   SQLELI+KG+ + AK+L   +S++  K ++       +    G  +  
Sbjct: 110 FRAPSKEVDIRTSQLELIMKGDIIRAKRL---ESIIPGKSVDSFNPDESIHPGDGDESQC 166

Query: 414 STVFSDGENHYEDKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFH 235
            +    GEN        W S Q +EAMSVL + L +K +KC+ C   NPKI+KPTFGWFH
Sbjct: 167 YSAEQLGEN--------WTSLQFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFH 218

Query: 234 VNRLANTEIRSNSIRSSRLDVTHS----GGGEDKPSSEVVNA 121
           +N L+  E R+++IRS   + T+     GGG+     ++ +A
Sbjct: 219 MNVLSADETRADTIRSVESETTNDDISLGGGDTTDVEDITSA 260


>gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  100 bits (249), Expect = 3e-19
 Identities = 64/162 (39%), Positives = 83/162 (51%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           FR+ + EV+ CVSQL+LI  G+ V AK+L    +                + N GS  S 
Sbjct: 110 FRAEKTEVERCVSQLKLIGNGDIVGAKRLDSDSADASSYS----------DYNEGSQESG 159

Query: 414 STVFSDGENHYEDKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFH 235
           S V     N    K   W S QL EAMSVLN FLK K  KC+NC+  NP I KP FGW H
Sbjct: 160 SIV----HNSEAVKPKEWTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLH 215

Query: 234 VNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYS 109
           +N +   ++R N IR  ++  T S    D+  S + +A D S
Sbjct: 216 MNGMLGAQMRENVIRGCKMVDTFS----DEAGSGLEDADDVS 253


>gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score =  100 bits (249), Expect = 3e-19
 Identities = 64/162 (39%), Positives = 83/162 (51%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           FR+ + EV+ CVSQL+LI  G+ V AK+L    +                + N GS  S 
Sbjct: 110 FRAEKTEVERCVSQLKLIGNGDIVGAKRLDSDSADASSYS----------DYNEGSQESG 159

Query: 414 STVFSDGENHYEDKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFH 235
           S V     N    K   W S QL EAMSVLN FLK K  KC+NC+  NP I KP FGW H
Sbjct: 160 SIV----HNSEAVKPKEWTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLH 215

Query: 234 VNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYS 109
           +N +   ++R N IR  ++  T S    D+  S + +A D S
Sbjct: 216 MNGMLGAQMRENVIRGCKMVDTFS----DEAGSGLEDADDVS 253


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  100 bits (248), Expect = 4e-19
 Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 3/158 (1%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTS- 418
           F++S   V   VSQLELI KG+ V AK L      +   +  +       ED+ GSH S 
Sbjct: 110 FKTSSSLVQKYVSQLELISKGDVVGAKNL----DSISPSESSYP------EDSDGSHVSC 159

Query: 417 DSTVFSDGENHYED--KQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFG 244
            STV S   ++     KQ  W S Q  EAMSV++ FLK K R C+NC+  +P++ KPTFG
Sbjct: 160 SSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFG 219

Query: 243 WFHVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEV 130
           WFH+  L++ + R+N IR S+L+   +G   D+  S +
Sbjct: 220 WFHMAGLSDAQTRANVIRGSKLERPLNGVDTDETHSSI 257


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
           arietinum]
          Length = 1660

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 63/172 (36%), Positives = 96/172 (55%), Gaps = 13/172 (7%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           F++SR+EV+   +QLELI+KG   +AK L       D+  ++ + ++ D +D++ S    
Sbjct: 110 FQASRKEVELRANQLELIMKGNIAKAKNL-------DEINLDESADLCDGDDSQCSSAEQ 162

Query: 414 STVFSDGENHYEDKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFH 235
                 GEN        W S Q +EAMSVL +FLK++ RKC+NC +INPKI  PTFGWFH
Sbjct: 163 L-----GEN--------WTSLQFSEAMSVLRKFLKKEYRKCQNCGYINPKITIPTFGWFH 209

Query: 234 VNRLANTEIRSNSIRSSRL----DVTHS----GGG-----EDKPSSEVVNAS 118
           V  L+  + R+N I  + +    ++ H     G G     ED  S ++ N++
Sbjct: 210 VKALSAAQARANVISGNDVSLASEIIHDDISLGNGDTTDVEDITSGDIANSN 261


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
           arietinum]
          Length = 1650

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 60/134 (44%), Positives = 76/134 (56%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           F++SR EV+   +QLELI+KG   +AK L       D   ++   E  DL D   S  S 
Sbjct: 110 FQASRNEVELRANQLELIMKGNIAKAKNL-------DAINLD---ESADLSDGNDSQCSS 159

Query: 414 STVFSDGENHYEDKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFH 235
                 GEN        W S Q +EAMSVL +FLK++ RKC+NC  INPKI KPTFGWFH
Sbjct: 160 DEQL--GEN--------WTSLQFSEAMSVLRKFLKKEFRKCQNCGNINPKITKPTFGWFH 209

Query: 234 VNRLANTEIRSNSI 193
           V  L+  + R+N I
Sbjct: 210 VKALSAAQARANVI 223


>gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis]
          Length = 1770

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 68/192 (35%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           FR +  EV  CVSQLELI+KG+   AK L  R S                  +  SH  D
Sbjct: 52  FRRNPVEVKKCVSQLELILKGDVARAKDLNSRPS------------------SESSHLKD 93

Query: 414 STVFSDGENHYEDK-QAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWF 238
                  +   +   Q    S QL+EAMSVLN FLK    KCRNCE     I +P FGW 
Sbjct: 94  YGYRGSKDRSAKPSTQPKLTSLQLSEAMSVLNNFLKPNHTKCRNCEAHRLTITQPVFGWL 153

Query: 237 HVNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTAS 58
           ++ R++    R+N IR+S+L+   S  GE  P  E++N  D +  D     +     T +
Sbjct: 154 NMERISGARARANVIRNSKLEGPFS-DGESLPEEEIIN--DVTSPDSDADTD-----TPA 205

Query: 57  DSTKKPSKKDAK 22
            STK    K  K
Sbjct: 206 TSTKSHRSKGGK 217


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1628

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 8/165 (4%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           FR+SR EV    SQLELI+KG   +AK LG       + K+   ++ VD +D       D
Sbjct: 111 FRASRDEVKRRASQLELILKGNISKAKSLG-------EIKLNETIDSVDDDD-------D 156

Query: 414 STVFSDGENHYEDKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFH 235
            + +S  E   E     W S Q +EAMSV+ EFL +  +KC NC  I+PKI KPTFG F+
Sbjct: 157 DSQWSGAEQLGES----WTSLQFSEAMSVIYEFLAKDYKKCLNCGCISPKITKPTFGRFN 212

Query: 234 VNRLANTEIRSNSIRSSRL--------DVTHSGGGEDKPSSEVVN 124
           V  L++ + R+N I S++         D+T  G G    ++++++
Sbjct: 213 VKALSSVQARANVISSAKAADVQADEEDITSGGAGNSNGNNQILS 257


>ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like
           [Fragaria vesca subsp. vesca]
          Length = 1673

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 65/192 (33%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           FR+SR +V  CVSQLEL+++G+ V AK+L                       N  S+  +
Sbjct: 121 FRTSREQVQKCVSQLELVMRGDVVAAKRLD------------------SDSPNHHSYLEE 162

Query: 414 STVFSDGENHYEDKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFH 235
               +D E     K   W S Q  EAMS+LN  L+ + + C+NC   NPKI KPTFGWF 
Sbjct: 163 GGEGNDTERDRHSKPERWTSLQFTEAMSILNCSLETQ-QTCKNCGHKNPKITKPTFGWFE 221

Query: 234 VNRLANTEIRSNSIRSSRL--DVTHSGGGEDKPSSEVVNASDYSWKDDSGTAEANSFLTA 61
            +   N   R N IR  +L   +T    GE          SD S         A+SF+T 
Sbjct: 222 RSGAENA--RKNVIRRCKLVGPLTVQEEGESCGDDVDAGISDISC--------ASSFVTQ 271

Query: 60  SDSTKKPSKKDA 25
             +TKK  ++++
Sbjct: 272 VTATKKSEEQES 283


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
           subunit RPA1-like [Cucumis sativus]
          Length = 1652

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 59/165 (35%), Positives = 83/165 (50%)
 Frame = -2

Query: 594 FRSSRREVDNCVSQLELIVKGETVEAKKLGLRQSLLDKKKMEWALEIVDLEDNRGSHTSD 415
           FR+    V+NC + LELI+ GE  +AK+L          + EW         N  S T  
Sbjct: 116 FRAGESMVENCKTLLELILDGEIAKAKEL----------EEEWM--------NSKSRTKS 157

Query: 414 STVFSDGENHYEDKQAFWDSSQLAEAMSVLNEFLKRKGRKCRNCEFINPKINKPTFGWFH 235
           S      E      +  W S Q +EA+SV+ +FLK K   C+ C   +PKI KPTFGWFH
Sbjct: 158 SHSMYTYERKNGQPET-WTSLQFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFH 216

Query: 234 VNRLANTEIRSNSIRSSRLDVTHSGGGEDKPSSEVVNASDYSWKD 100
           +  LA  + R+N+IR S+  V+ S G E   S E    ++ + +D
Sbjct: 217 MKGLAGVQKRANAIRRSK-PVSVSSGAEGVSSLEEETTTEATVED 260