BLASTX nr result
ID: Rehmannia26_contig00024112
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00024112
(882 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004245494.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 229 1e-57
ref|XP_006343825.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 226 7e-57
ref|XP_006391611.1| hypothetical protein EUTSA_v10023690mg [Eutr... 222 2e-55
ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 220 6e-55
ref|XP_002518855.1| structural constituent of ribosome, putative... 219 1e-54
gb|EOY25088.1| Translation elongation factor EF1B/ribosomal prot... 218 3e-54
ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycin... 217 4e-54
sp|P82403.2|RR6_SPIOL RecName: Full=30S ribosomal protein S6 alp... 216 7e-54
ref|XP_004503594.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 216 1e-53
ref|XP_002297965.2| hypothetical protein POPTR_0001s10930g [Popu... 215 2e-53
ref|XP_002886339.1| ribosomal protein S6 family protein [Arabido... 215 2e-53
ref|XP_006300553.1| hypothetical protein CARUB_v10020948mg [Caps... 214 3e-53
ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycin... 213 6e-53
gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana] 213 1e-52
ref|NP_176632.1| 30S ribosomal protein S6 alpha [Arabidopsis tha... 213 1e-52
ref|XP_006476347.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 212 1e-52
ref|XP_006439300.1| hypothetical protein CICLE_v10022161mg [Citr... 212 2e-52
gb|EXC14469.1| 30S ribosomal protein S6 alpha [Morus notabilis] 211 3e-52
gb|AFK44002.1| unknown [Lotus japonicus] 211 4e-52
gb|ESW32184.1| hypothetical protein PHAVU_002G300600g [Phaseolus... 207 4e-51
>ref|XP_004245494.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Solanum lycopersicum]
Length = 196
Score = 229 bits (583), Expect = 1e-57
Identities = 117/147 (79%), Positives = 122/147 (82%), Gaps = 1/147 (0%)
Frame = +2
Query: 257 EFDISFFERDLGGSGAP-PPTSPESDFPDVEDKAEPQCPPGLRQYETMVVLRPDMSEDER 433
EF SFFE GG A PPT+P S VEDK EPQCPPGLR YETMVVLRPDMSEDER
Sbjct: 49 EFSGSFFEGGFGGGNADEPPTTPWSGISAVEDKEEPQCPPGLRPYETMVVLRPDMSEDER 108
Query: 434 LAFTQKYEELLVGGGAMYVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLLFTYFTKPE 613
LA TQKYEELLV GG MYVEV NRGVIPLAY IR+KNKAGETNTYLDGIYLLFTYFTKPE
Sbjct: 109 LALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPE 168
Query: 614 SMTILGETLLADDDVIRSSSFKIRKRK 694
S+ L TL+ADDDVIRSS+FKIRKRK
Sbjct: 169 SIVALEATLVADDDVIRSSTFKIRKRK 195
>ref|XP_006343825.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Solanum tuberosum]
Length = 196
Score = 226 bits (577), Expect = 7e-57
Identities = 116/147 (78%), Positives = 121/147 (82%), Gaps = 1/147 (0%)
Frame = +2
Query: 257 EFDISFFERDLGGSGAP-PPTSPESDFPDVEDKAEPQCPPGLRQYETMVVLRPDMSEDER 433
EF SFFE GG A PPT+P S VEDK EPQCPPGLR YETMVVLRPDMSEDER
Sbjct: 49 EFSGSFFEGGFGGGNADEPPTTPWSGISAVEDKEEPQCPPGLRPYETMVVLRPDMSEDER 108
Query: 434 LAFTQKYEELLVGGGAMYVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLLFTYFTKPE 613
LA TQKYEELLV GG MYVEV NRGVIPLAY IR+KNKAGETNTYLDGIYLLFTYFTKPE
Sbjct: 109 LALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPE 168
Query: 614 SMTILGETLLADDDVIRSSSFKIRKRK 694
S+ L TL+ DDDVIRSS+FKIRKRK
Sbjct: 169 SIVPLEATLVTDDDVIRSSTFKIRKRK 195
>ref|XP_006391611.1| hypothetical protein EUTSA_v10023690mg [Eutrema salsugineum]
gi|557088117|gb|ESQ28897.1| hypothetical protein
EUTSA_v10023690mg [Eutrema salsugineum]
Length = 209
Score = 222 bits (565), Expect = 2e-55
Identities = 122/193 (63%), Positives = 130/193 (67%)
Frame = +2
Query: 116 IIPKPHLPHSHSSALNLNTFFKSNNSIKFPQLQISLNPQRTAASVRAEFDISFFERDLGG 295
I +P L SHS L F + I Q Q N S +F +FFE G
Sbjct: 19 ISSQPLLSFSHS----LRPFISKSKPIASLQQQKRDNSGFVVKSQALDFSGTFFEGGFGS 74
Query: 296 SGAPPPTSPESDFPDVEDKAEPQCPPGLRQYETMVVLRPDMSEDERLAFTQKYEELLVGG 475
P TS +EDK EPQCPPGLRQYETM VLRPDMSEDERL TQKYEELLV G
Sbjct: 75 DDDPTSTSGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAG 134
Query: 476 GAMYVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLLFTYFTKPESMTILGETLLADDD 655
G MYVEV NRGVIPLAY IRKKNKAGETNTYLDGIYLLFTYFTKPES+T L L ADDD
Sbjct: 135 GGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESITPLEAVLTADDD 194
Query: 656 VIRSSSFKIRKRK 694
+IRSSSFKI+KRK
Sbjct: 195 IIRSSSFKIKKRK 207
>ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Vitis
vinifera]
Length = 199
Score = 220 bits (560), Expect = 6e-55
Identities = 118/161 (73%), Positives = 126/161 (78%), Gaps = 4/161 (2%)
Frame = +2
Query: 224 NPQRTAA-SVRA---EFDISFFERDLGGSGAPPPTSPESDFPDVEDKAEPQCPPGLRQYE 391
+P+R S+RA +F SFFE G S P + P VEDK EPQCPPGLRQYE
Sbjct: 39 HPRRAPGLSIRALTLDFSGSFFEGGFG-SDDDPNSPPGPGIAAVEDKDEPQCPPGLRQYE 97
Query: 392 TMVVLRPDMSEDERLAFTQKYEELLVGGGAMYVEVLNRGVIPLAYGIRKKNKAGETNTYL 571
TM VLRPDMSEDERLA TQKYEELLV GG MYVEV NRGVIPLAY I+KKNKAGE+NTYL
Sbjct: 98 TMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYL 157
Query: 572 DGIYLLFTYFTKPESMTILGETLLADDDVIRSSSFKIRKRK 694
DGIYLLFTYFTKPESM +L TL ADDDVIRSSSFKIRKRK
Sbjct: 158 DGIYLLFTYFTKPESMEVLEATLTADDDVIRSSSFKIRKRK 198
>ref|XP_002518855.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223541842|gb|EEF43388.1| structural constituent of
ribosome, putative [Ricinus communis]
Length = 205
Score = 219 bits (558), Expect = 1e-54
Identities = 113/153 (73%), Positives = 119/153 (77%)
Frame = +2
Query: 236 TAASVRAEFDISFFERDLGGSGAPPPTSPESDFPDVEDKAEPQCPPGLRQYETMVVLRPD 415
T S +F SF+E GS PPT S VEDK PQCPPGLRQYETM VLRPD
Sbjct: 52 TIKSQALDFSGSFYEGSGFGSEEDPPTLTGSGMTAVEDKEPPQCPPGLRQYETMAVLRPD 111
Query: 416 MSEDERLAFTQKYEELLVGGGAMYVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLLFT 595
MSEDERLA TQKYEELLV GG MYVEV NRGVIPLAY I+KKNKAGETNTYLDGIYLLFT
Sbjct: 112 MSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLFT 171
Query: 596 YFTKPESMTILGETLLADDDVIRSSSFKIRKRK 694
YFTKPES+ +L TL DDD+IRSSSFKIRKRK
Sbjct: 172 YFTKPESIEMLEATLNTDDDIIRSSSFKIRKRK 204
>gb|EOY25088.1| Translation elongation factor EF1B/ribosomal protein S6 family
protein [Theobroma cacao]
Length = 337
Score = 218 bits (554), Expect = 3e-54
Identities = 113/156 (72%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Frame = +2
Query: 236 TAASVRA---EFDISFFERDLGGSGAPPPTSPESDFPDVEDKAEPQCPPGLRQYETMVVL 406
T +V+A +F SFFE G S PP+ P S +EDK EPQCPPGLRQYETM+VL
Sbjct: 182 TTVTVKARTLDFSGSFFEGGFG-SDDDPPSQPGSGITALEDKEEPQCPPGLRQYETMMVL 240
Query: 407 RPDMSEDERLAFTQKYEELLVGGGAMYVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYL 586
RPDMSEDERLA TQKYEELLV GG MYVEV NRGV+PLAY I+KKNKAGETNTYLDGIYL
Sbjct: 241 RPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVVPLAYSIKKKNKAGETNTYLDGIYL 300
Query: 587 LFTYFTKPESMTILGETLLADDDVIRSSSFKIRKRK 694
LFTYF KPESM L L DDDVIRSSSFK+RKRK
Sbjct: 301 LFTYFMKPESMATLEVALNTDDDVIRSSSFKVRKRK 336
>ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycine max]
gi|255628961|gb|ACU14825.1| unknown [Glycine max]
Length = 214
Score = 217 bits (553), Expect = 4e-54
Identities = 122/200 (61%), Positives = 142/200 (71%), Gaps = 12/200 (6%)
Frame = +2
Query: 131 HLPHSHSSALN------LNTFFKSNNSIKFPQLQISLNPQRT--AASVRAE---FDISFF 277
++PHS S A + F ++ ++ F + + +P+R S+RA+ F SFF
Sbjct: 17 NIPHSSSKASASFVSSPIGAFSRTPKTL-FAESRFHFHPKRNDYGFSIRAQTLDFSDSFF 75
Query: 278 ERDLGGSGAPP-PTSPESDFPDVEDKAEPQCPPGLRQYETMVVLRPDMSEDERLAFTQKY 454
E G P P P F VE+K EPQCPPGLRQYETM+VLRPDMSEDERLA TQKY
Sbjct: 76 EGGFGSEDVPSSPGGP--GFTAVEEKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKY 133
Query: 455 EELLVGGGAMYVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLLFTYFTKPESMTILGE 634
EE+LV GG MYVEV NRGVIPLAY I+KKNKAGETNTYLDGIYLLFTYFTKPES+T L E
Sbjct: 134 EEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLFTYFTKPESITPLEE 193
Query: 635 TLLADDDVIRSSSFKIRKRK 694
T+L DD+VIRS S KIRKRK
Sbjct: 194 TMLTDDNVIRSMSSKIRKRK 213
>sp|P82403.2|RR6_SPIOL RecName: Full=30S ribosomal protein S6 alpha, chloroplastic;
Contains: RecName: Full=30S ribosomal protein S6 beta,
chloroplastic; Contains: RecName: Full=30S ribosomal
protein S6 gamma, chloroplastic; Contains: RecName:
Full=30S ribosomal protein S6 delta, chloroplastic;
Contains: RecName: Full=30S ribosomal protein S6
epsilon, chloroplastic; Flags: Precursor
gi|188036207|pdb|3BBN|F Chain F, Homology Model For The
Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em
Map Of The 70s Chlororibosome.
gi|7582401|gb|AAF64311.1|AF250383_1 plastid ribosomal
protein S6 precursor, partial [Spinacia oleracea]
Length = 168
Score = 216 bits (551), Expect = 7e-54
Identities = 108/150 (72%), Positives = 121/150 (80%)
Frame = +2
Query: 245 SVRAEFDISFFERDLGGSGAPPPTSPESDFPDVEDKAEPQCPPGLRQYETMVVLRPDMSE 424
++ +F SFFE GG PP++P + VE+K EPQCPPGLRQYETM VLRPDM+E
Sbjct: 19 AIALDFSGSFFEGGFGGLDEDPPSTPPAGLA-VEEKPEPQCPPGLRQYETMAVLRPDMTE 77
Query: 425 DERLAFTQKYEELLVGGGAMYVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLLFTYFT 604
DERL TQKYEELLV GGAMYVEV NRGVIPLAY I++KNKAGETN YLDGIYLLFTYFT
Sbjct: 78 DERLTLTQKYEELLVAGGAMYVEVFNRGVIPLAYSIKRKNKAGETNNYLDGIYLLFTYFT 137
Query: 605 KPESMTILGETLLADDDVIRSSSFKIRKRK 694
KPES++ L L+ DDDVIRSSSFKIRKRK
Sbjct: 138 KPESISPLEAALVTDDDVIRSSSFKIRKRK 167
>ref|XP_004503594.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Cicer arietinum]
Length = 196
Score = 216 bits (549), Expect = 1e-53
Identities = 109/159 (68%), Positives = 125/159 (78%)
Frame = +2
Query: 218 SLNPQRTAASVRAEFDISFFERDLGGSGAPPPTSPESDFPDVEDKAEPQCPPGLRQYETM 397
+LN + + +F SFFE +G P +P + F VE+K EPQCPPGLRQYETM
Sbjct: 39 NLNSAFSVNAQTLDFTGSFFEGGIGSGD--DPITPGTGFAAVEEKEEPQCPPGLRQYETM 96
Query: 398 VVLRPDMSEDERLAFTQKYEELLVGGGAMYVEVLNRGVIPLAYGIRKKNKAGETNTYLDG 577
VLRPDMSEDERLAFTQKYEELLV GG MY+EV NRGVIPLAY I+KKNK GE+NTY+DG
Sbjct: 97 AVLRPDMSEDERLAFTQKYEELLVAGGGMYIEVFNRGVIPLAYSIKKKNKEGESNTYMDG 156
Query: 578 IYLLFTYFTKPESMTILGETLLADDDVIRSSSFKIRKRK 694
IYLLFTYFTKPES+T L TLLADD+V+RS+S KIRKRK
Sbjct: 157 IYLLFTYFTKPESITALEATLLADDNVVRSTSVKIRKRK 195
>ref|XP_002297965.2| hypothetical protein POPTR_0001s10930g [Populus trichocarpa]
gi|550346990|gb|EEE82770.2| hypothetical protein
POPTR_0001s10930g [Populus trichocarpa]
Length = 240
Score = 215 bits (547), Expect = 2e-53
Identities = 114/198 (57%), Positives = 130/198 (65%), Gaps = 5/198 (2%)
Frame = +2
Query: 116 IIPKPHLPHSHSSALNLNTFFKSNNSIKFPQL-----QISLNPQRTAASVRAEFDISFFE 280
++ P P S S + +L S FP + NP + +F SF+E
Sbjct: 42 LVSSPFYPSSFSKSPSLPLLSFSQTLKPFPNTSKLVYRAHSNPTTAVKAQTVDFAGSFYE 101
Query: 281 RDLGGSGAPPPTSPESDFPDVEDKAEPQCPPGLRQYETMVVLRPDMSEDERLAFTQKYEE 460
+G P VE+K P CPPGLRQYETM VLRPDMSEDERLA TQKYEE
Sbjct: 102 GGIGSDDEPDSPIGSGTMTAVEEKETPPCPPGLRQYETMAVLRPDMSEDERLALTQKYEE 161
Query: 461 LLVGGGAMYVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLLFTYFTKPESMTILGETL 640
LLV GG MYVEV NRGV+PLAY I+KKNKAGE+NTYLDGIYLLFTYFTKPES+ IL +TL
Sbjct: 162 LLVAGGGMYVEVFNRGVVPLAYSIKKKNKAGESNTYLDGIYLLFTYFTKPESIGILEQTL 221
Query: 641 LADDDVIRSSSFKIRKRK 694
DDDVIRSSSFK+RKRK
Sbjct: 222 NTDDDVIRSSSFKVRKRK 239
>ref|XP_002886339.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
lyrata] gi|297332180|gb|EFH62598.1| ribosomal protein S6
family protein [Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 215 bits (547), Expect = 2e-53
Identities = 123/194 (63%), Positives = 131/194 (67%), Gaps = 4/194 (2%)
Frame = +2
Query: 125 KPHLPHSHSSALNLNTFFKSNNSI--KFPQLQISLNPQRTAASVRAEFDISFFERDLGGS 298
+P L SHS L F + I Q Q Q S +F +FFE G
Sbjct: 22 QPLLSFSHS----LRPFISKSKPICASLQQQQKRDGSQFVVKSQALDFSGTFFEGGFGSD 77
Query: 299 GAP--PPTSPESDFPDVEDKAEPQCPPGLRQYETMVVLRPDMSEDERLAFTQKYEELLVG 472
P PP S S +EDK EPQCPPGLRQYETM VLRPDMSEDERL TQKYEELLV
Sbjct: 78 DDPTSPPGSGVSTA--LEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVA 135
Query: 473 GGAMYVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLLFTYFTKPESMTILGETLLADD 652
GG MYVEV NRGVIPLAY IRKKNKAGETNTYLDGIYLLFTYFTKPES+T L L ADD
Sbjct: 136 GGGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESITPLETVLTADD 195
Query: 653 DVIRSSSFKIRKRK 694
D+IRSSSFKI+KRK
Sbjct: 196 DIIRSSSFKIKKRK 209
>ref|XP_006300553.1| hypothetical protein CARUB_v10020948mg [Capsella rubella]
gi|482569263|gb|EOA33451.1| hypothetical protein
CARUB_v10020948mg [Capsella rubella]
Length = 211
Score = 214 bits (545), Expect = 3e-53
Identities = 118/192 (61%), Positives = 128/192 (66%), Gaps = 2/192 (1%)
Frame = +2
Query: 125 KPHLPHSHSSALNLNTFFKSNNSIKFPQLQISLNP--QRTAASVRAEFDISFFERDLGGS 298
+P L SHS L F + + Q Q Q S +F +FFE G
Sbjct: 22 RPLLSFSHS----LRPFISKSKHVASIQQQPQKRDGSQLVVKSQALDFSGTFFEGGFGSD 77
Query: 299 GAPPPTSPESDFPDVEDKAEPQCPPGLRQYETMVVLRPDMSEDERLAFTQKYEELLVGGG 478
P S +EDK EPQCPPGLRQYETM VLRPDMSEDERL TQKYEELLV GG
Sbjct: 78 DDPISPSGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAGG 137
Query: 479 AMYVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLLFTYFTKPESMTILGETLLADDDV 658
MYVEV NRGVIPLAY IRKKNKAGETNTYLDGIYLLFTYFT+PES+T L L ADDD+
Sbjct: 138 GMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTRPESITPLEAVLTADDDI 197
Query: 659 IRSSSFKIRKRK 694
IRSSSFKI+KRK
Sbjct: 198 IRSSSFKIKKRK 209
>ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycine max]
gi|255625673|gb|ACU13181.1| unknown [Glycine max]
Length = 214
Score = 213 bits (543), Expect = 6e-53
Identities = 115/155 (74%), Positives = 126/155 (81%), Gaps = 5/155 (3%)
Frame = +2
Query: 245 SVRAE---FDISFFERDLGGSGAPP-PTSPESD-FPDVEDKAEPQCPPGLRQYETMVVLR 409
S+RA+ F SFFE GG G+ P+SP F VE+K EPQCPPGLRQYETM+VLR
Sbjct: 62 SIRAQTLDFSDSFFE---GGFGSEDDPSSPGGPGFTGVEEKEEPQCPPGLRQYETMMVLR 118
Query: 410 PDMSEDERLAFTQKYEELLVGGGAMYVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLL 589
PDMSEDERLA TQKYEE+LV GG MYVEV NRGVIPLAY I+KKNKAGETNTYLDGIYLL
Sbjct: 119 PDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLL 178
Query: 590 FTYFTKPESMTILGETLLADDDVIRSSSFKIRKRK 694
FTYFTKPES+T L ET+L DD+VIRS S KIRKRK
Sbjct: 179 FTYFTKPESITPLEETMLTDDNVIRSMSSKIRKRK 213
>gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana]
Length = 231
Score = 213 bits (541), Expect = 1e-52
Identities = 117/190 (61%), Positives = 127/190 (66%)
Frame = +2
Query: 125 KPHLPHSHSSALNLNTFFKSNNSIKFPQLQISLNPQRTAASVRAEFDISFFERDLGGSGA 304
+P L SHS L F + + +Q Q S +F +FFE G
Sbjct: 45 QPLLSFSHS----LRPFISKSKPM-CASIQKRDGSQFVVKSQALDFSGTFFEGGFGSDDD 99
Query: 305 PPPTSPESDFPDVEDKAEPQCPPGLRQYETMVVLRPDMSEDERLAFTQKYEELLVGGGAM 484
P S +EDK EPQCPPGLRQYETM VLRPDMSEDERL TQKYEELLV GG M
Sbjct: 100 PTSPSGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGM 159
Query: 485 YVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLLFTYFTKPESMTILGETLLADDDVIR 664
YVEV NRGVIPLAY IRKKNKAGETNTYLDGIYLLFTYFTKPES+ L L ADDD+IR
Sbjct: 160 YVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESIVPLETVLTADDDIIR 219
Query: 665 SSSFKIRKRK 694
SSSFKI+KRK
Sbjct: 220 SSSFKIKKRK 229
>ref|NP_176632.1| 30S ribosomal protein S6 alpha [Arabidopsis thaliana]
gi|75161441|sp|Q8VY91.1|RR6_ARATH RecName: Full=30S
ribosomal protein S6 alpha, chloroplastic; Flags:
Precursor gi|18252237|gb|AAL61951.1| plastid ribosomal
protein S6, putative [Arabidopsis thaliana]
gi|21386993|gb|AAM47900.1| plastid ribosomal protein S6,
putative [Arabidopsis thaliana]
gi|21553658|gb|AAM62751.1| plastid ribosomal protein S6,
putative [Arabidopsis thaliana]
gi|332196127|gb|AEE34248.1| translation elongation
factor EF1B/ribosomal protein S6 family protein
[Arabidopsis thaliana]
Length = 207
Score = 213 bits (541), Expect = 1e-52
Identities = 117/190 (61%), Positives = 127/190 (66%)
Frame = +2
Query: 125 KPHLPHSHSSALNLNTFFKSNNSIKFPQLQISLNPQRTAASVRAEFDISFFERDLGGSGA 304
+P L SHS L F + + +Q Q S +F +FFE G
Sbjct: 21 QPLLSFSHS----LRPFISKSKPM-CASIQKRDGSQFVVKSQALDFSGTFFEGGFGSDDD 75
Query: 305 PPPTSPESDFPDVEDKAEPQCPPGLRQYETMVVLRPDMSEDERLAFTQKYEELLVGGGAM 484
P S +EDK EPQCPPGLRQYETM VLRPDMSEDERL TQKYEELLV GG M
Sbjct: 76 PTSPSGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGM 135
Query: 485 YVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLLFTYFTKPESMTILGETLLADDDVIR 664
YVEV NRGVIPLAY IRKKNKAGETNTYLDGIYLLFTYFTKPES+ L L ADDD+IR
Sbjct: 136 YVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESIVPLETVLTADDDIIR 195
Query: 665 SSSFKIRKRK 694
SSSFKI+KRK
Sbjct: 196 SSSFKIKKRK 205
>ref|XP_006476347.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Citrus sinensis]
Length = 219
Score = 212 bits (540), Expect = 1e-52
Identities = 118/188 (62%), Positives = 134/188 (71%), Gaps = 6/188 (3%)
Frame = +2
Query: 149 SSALNLNTFFKSNNSIKFPQLQISLNPQRTAASVRAE---FDISFFERDLGGSGAPPPTS 319
S A +L TF + S+ L N + +V+A+ F SFFE GS P +
Sbjct: 33 SFARSLKTFRTNAKSL----LLHKKNSNSVSLTVKAQTLDFSGSFFEGGGFGSDDDPTSV 88
Query: 320 PESDFPD---VEDKAEPQCPPGLRQYETMVVLRPDMSEDERLAFTQKYEELLVGGGAMYV 490
P +EDK EPQCPPGLRQYETM+VLRPDMSEDERLA TQKYEELLV GG MYV
Sbjct: 89 PPGSVGTATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEELLVAGGGMYV 148
Query: 491 EVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLLFTYFTKPESMTILGETLLADDDVIRSS 670
EV NRGVIPLAY IRK+NKAGE+NTYLDGIYLLFTYFTKPES+ L T+ ADDDVIRSS
Sbjct: 149 EVFNRGVIPLAYSIRKRNKAGESNTYLDGIYLLFTYFTKPESIEALERTMKADDDVIRSS 208
Query: 671 SFKIRKRK 694
SFK+RK+K
Sbjct: 209 SFKVRKQK 216
>ref|XP_006439300.1| hypothetical protein CICLE_v10022161mg [Citrus clementina]
gi|557541562|gb|ESR52540.1| hypothetical protein
CICLE_v10022161mg [Citrus clementina]
Length = 219
Score = 212 bits (539), Expect = 2e-52
Identities = 116/185 (62%), Positives = 132/185 (71%), Gaps = 3/185 (1%)
Frame = +2
Query: 149 SSALNLNTFFKSNNSIKFPQLQISLNPQRTAASVRAEFDISFFERDLGGSGAPPPTSPES 328
S A +L TF ++N + S + T + +F SFFE GS P + P
Sbjct: 33 SFARSLKTF-RTNAKSLILHKKNSNSVSLTVKAQTIDFSGSFFEGGGFGSDDDPTSVPPG 91
Query: 329 DFPD---VEDKAEPQCPPGLRQYETMVVLRPDMSEDERLAFTQKYEELLVGGGAMYVEVL 499
+EDK EPQCPPGLRQYETM+VLRPDMSEDERLA TQKYEELLV GG MYVEV
Sbjct: 92 SVGTATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEELLVAGGGMYVEVF 151
Query: 500 NRGVIPLAYGIRKKNKAGETNTYLDGIYLLFTYFTKPESMTILGETLLADDDVIRSSSFK 679
NRGVIPLAY IRK+NKAGE+NTYLDGIYLLFTYFTKPES+ L T+ ADDDVIRSSSFK
Sbjct: 152 NRGVIPLAYSIRKRNKAGESNTYLDGIYLLFTYFTKPESIEALERTMKADDDVIRSSSFK 211
Query: 680 IRKRK 694
+RK+K
Sbjct: 212 VRKQK 216
>gb|EXC14469.1| 30S ribosomal protein S6 alpha [Morus notabilis]
Length = 209
Score = 211 bits (537), Expect = 3e-52
Identities = 115/163 (70%), Positives = 123/163 (75%), Gaps = 6/163 (3%)
Frame = +2
Query: 224 NPQRTAASV----RAEFDISFFERDLGG--SGAPPPTSPESDFPDVEDKAEPQCPPGLRQ 385
N RT SV +F SFFE GG S PP+ P VEDK EP+CPPGLRQ
Sbjct: 49 NKTRTGLSVVKAQTLDFSGSFFE---GGIVSDEDPPSPPGPGLAAVEDKEEPECPPGLRQ 105
Query: 386 YETMVVLRPDMSEDERLAFTQKYEELLVGGGAMYVEVLNRGVIPLAYGIRKKNKAGETNT 565
+ETMVVLRPDMSE+ERLA TQKYEELLV GG MYVEV NRGVIPLAY I+KKN+AGETNT
Sbjct: 106 FETMVVLRPDMSEEERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNRAGETNT 165
Query: 566 YLDGIYLLFTYFTKPESMTILGETLLADDDVIRSSSFKIRKRK 694
YLDGIYLLFTYFTKPES+ L E L ADDDVIRS S KIRKRK
Sbjct: 166 YLDGIYLLFTYFTKPESIGPLEEMLKADDDVIRSMSLKIRKRK 208
>gb|AFK44002.1| unknown [Lotus japonicus]
Length = 209
Score = 211 bits (536), Expect = 4e-52
Identities = 119/196 (60%), Positives = 137/196 (69%), Gaps = 8/196 (4%)
Frame = +2
Query: 131 HLPHSHSSALNLNTFFKSNNSIKFPQLQISLN-----PQRTAASVRAE---FDISFFERD 286
++PH +S + +TFF S P S + + SV+A+ F SFFE
Sbjct: 17 NIPHCYS--IPPSTFFSSPIRAFKPLFAESKSHCYQKKNDSVLSVKAQTLDFTDSFFEGG 74
Query: 287 LGGSGAPPPTSPESDFPDVEDKAEPQCPPGLRQYETMVVLRPDMSEDERLAFTQKYEELL 466
LG S + E+K EPQCPPGLRQYETM VLRPDMSEDERLA TQKYEELL
Sbjct: 75 LGSED--DLNSSGTGLTATEEKEEPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELL 132
Query: 467 VGGGAMYVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLLFTYFTKPESMTILGETLLA 646
V GG MYVEV NRGVIPLAY I+KKNKAGETNTYLDGIYLL+TYFTKPES+ L ETLLA
Sbjct: 133 VAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLYTYFTKPESIVALEETLLA 192
Query: 647 DDDVIRSSSFKIRKRK 694
DDDV+RS++FKI+KRK
Sbjct: 193 DDDVLRSTTFKIKKRK 208
>gb|ESW32184.1| hypothetical protein PHAVU_002G300600g [Phaseolus vulgaris]
Length = 214
Score = 207 bits (527), Expect = 4e-51
Identities = 108/148 (72%), Positives = 120/148 (81%), Gaps = 2/148 (1%)
Frame = +2
Query: 257 EFDISFFERDLGGSGAPP-PTSPE-SDFPDVEDKAEPQCPPGLRQYETMVVLRPDMSEDE 430
+F SFFE GG G+ P SP + F VE+K EP CPPGLRQYETM+VLRPDM+EDE
Sbjct: 69 DFSDSFFE---GGFGSEDDPNSPGGTGFTAVEEKEEPPCPPGLRQYETMMVLRPDMTEDE 125
Query: 431 RLAFTQKYEELLVGGGAMYVEVLNRGVIPLAYGIRKKNKAGETNTYLDGIYLLFTYFTKP 610
RLA TQKYEE+LV GG MYVEV NRGVIPLAY I+KKNKAGETNTYLDGIYLLFTYFTKP
Sbjct: 126 RLALTQKYEEILVAGGGMYVEVFNRGVIPLAYAIKKKNKAGETNTYLDGIYLLFTYFTKP 185
Query: 611 ESMTILGETLLADDDVIRSSSFKIRKRK 694
ES+ L ET+L DD+V RS SFK+RKRK
Sbjct: 186 ESVKPLEETVLTDDNVFRSISFKVRKRK 213