BLASTX nr result

ID: Rehmannia26_contig00023282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00023282
         (426 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006486280.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g...    68   1e-09
ref|XP_006435792.1| hypothetical protein CICLE_v10031551mg [Citr...    68   1e-09
ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box pro...    66   4e-09
ref|XP_004515821.1| PREDICTED: FBD-associated F-box protein At3g...    62   1e-07
ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus ...    60   4e-07
gb|EOY00981.1| Ubiquitin-protein ligase, putative [Theobroma cacao]    59   5e-07
gb|ESW04240.1| hypothetical protein PHAVU_011G078500g [Phaseolus...    59   9e-07
ref|XP_006600804.1| PREDICTED: putative F-box protein At3g58860-...    57   2e-06
gb|EOY20631.1| Ubiquitin-protein ligase-like protein [Theobroma ...    56   4e-06
ref|XP_003608851.1| F-box family-6 [Medicago truncatula] gi|3555...    56   6e-06

>ref|XP_006486280.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g53840-like isoform X3
           [Citrus sinensis]
          Length = 368

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
 Frame = -1

Query: 426 RGSSLTKNLQVVDPLPNLKVLEISGC-TIHSLEVSVMNLVSCTYQGNEIILPFKEIPNLS 250
           +G+     ++V  P   LK LE+     + +LE++  NL+S  +   E+ + FK +P+L 
Sbjct: 187 KGAEKLIRIRVSGPSLKLKYLELRDLPNLSNLEINAPNLISFEFCAGELTVNFKHVPSLV 246

Query: 249 ELTLGGDFAQFFIYDPDKHSSYSAQLVKLALNIQWKEIARRELRYVRPNLPRLYSLEHLE 70
           E+++ GD+  +F+Y   + SS+  QL  L LN+    +    L     ++P+  +L+HLE
Sbjct: 247 EMSIEGDYCTYFVYTLHQFSSFLPQLRTLKLNLMVVSVPEDFLN----SIPKFPNLKHLE 302

Query: 69  LNVKASVGGSLHFFTSLIKASPL 1
           + +        H   + +KASPL
Sbjct: 303 MTLANGDLDCYHPCVAFLKASPL 325


>ref|XP_006435792.1| hypothetical protein CICLE_v10031551mg [Citrus clementina]
           gi|568865843|ref|XP_006486278.1| PREDICTED:
           F-box/FBD/LRR-repeat protein At5g53840-like isoform X1
           [Citrus sinensis] gi|568865845|ref|XP_006486279.1|
           PREDICTED: F-box/FBD/LRR-repeat protein At5g53840-like
           isoform X2 [Citrus sinensis] gi|557537988|gb|ESR49032.1|
           hypothetical protein CICLE_v10031551mg [Citrus
           clementina]
          Length = 440

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
 Frame = -1

Query: 426 RGSSLTKNLQVVDPLPNLKVLEISGC-TIHSLEVSVMNLVSCTYQGNEIILPFKEIPNLS 250
           +G+     ++V  P   LK LE+     + +LE++  NL+S  +   E+ + FK +P+L 
Sbjct: 187 KGAEKLIRIRVSGPSLKLKYLELRDLPNLSNLEINAPNLISFEFCAGELTVNFKHVPSLV 246

Query: 249 ELTLGGDFAQFFIYDPDKHSSYSAQLVKLALNIQWKEIARRELRYVRPNLPRLYSLEHLE 70
           E+++ GD+  +F+Y   + SS+  QL  L LN+    +    L     ++P+  +L+HLE
Sbjct: 247 EMSIEGDYCTYFVYTLHQFSSFLPQLRTLKLNLMVVSVPEDFLN----SIPKFPNLKHLE 302

Query: 69  LNVKASVGGSLHFFTSLIKASPL 1
           + +        H   + +KASPL
Sbjct: 303 MTLANGDLDCYHPCVAFLKASPL 325


>ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box protein At5g56700-like
           [Cucumis sativus] gi|449501454|ref|XP_004161371.1|
           PREDICTED: putative FBD-associated F-box protein
           At5g56700-like [Cucumis sativus]
          Length = 475

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 53/135 (39%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
 Frame = -1

Query: 405 NLQVVDPLPNLKVLEISGCT-IHSLEVSVMNLVSCTYQGNEIILPFKEIPNLSELTLGGD 229
           +L+VV     L+ LE+  C  + SLEVS  NL S  Y G  + +P K  P L E   G +
Sbjct: 238 SLRVVGASLKLRQLEVCMCNYLESLEVSAPNLESFKYVGPWLSMPLKNTPKLLETYFGSE 297

Query: 228 FAQFFIYDPDKHSSYSAQLVKLALNIQWKEIARRELRYVRPNLPRLYSLEHLELNVKASV 49
           F    I      SSYS+QL KL L+++   +  +  R      P L +L+ L+L V A  
Sbjct: 298 FGVEIIDHFFLLSSYSSQLQKLILDLEVDFMENQGFR----KWPILANLKELKLIVIAEG 353

Query: 48  GGSLHFFTSLIKASP 4
             SL  FTSLIKASP
Sbjct: 354 HSSLIGFTSLIKASP 368


>ref|XP_004515821.1| PREDICTED: FBD-associated F-box protein At3g52670-like [Cicer
           arietinum]
          Length = 454

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
 Frame = -1

Query: 420 SSLTKNLQVVDPLPNLKVLEISGCT-IHSLEVSVMNLVSCTYQGNEIILPFKEIPNLSEL 244
           S++ K +++ D   NLK LE+ GC  +  LE+    LVS  Y G+ I   FK +P+L E 
Sbjct: 222 SNVPKTMKISDSSLNLKCLELVGCLELTKLEIFAEKLVSYKYYGSFIKREFKSVPSLVEA 281

Query: 243 TLGGDFAQFFIYDPDKHSSYSAQLVKLALNIQWKEIARRELRYVRPNLPRLYSLEHLELN 64
           + GG F QF         S+ +Q+  L L+I        E+ Y   + P+L +++HLEL 
Sbjct: 282 SFGGYFVQF------ARESFISQIKVLKLDITQNS---PEIIYWLIHFPKLKNVKHLELV 332

Query: 63  VKASVGGSLHFFTSLIKASP 4
                  +L     L+KA+P
Sbjct: 333 ACFDHDITLSACVMLLKATP 352


>ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547375|gb|EEF48870.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 464

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
 Frame = -1

Query: 405 NLQVVDPLPNLKVLEISGCT-IHSLEVSVMNLVSCTYQGNEIILPFKEIPNLSELTLGGD 229
           +L+V      LK LE+  C  +  LE++  +LVS  Y G  I LPFK +PNL + + GG 
Sbjct: 222 SLKVSGSSLKLKYLEMVCCNNLKYLEITAASLVSFKYYGPLIGLPFKSVPNLVDASFGGP 281

Query: 228 FAQFFIYDPDKHSSYSAQLVKLALNIQWKEIARRELRYVRPNLPRLYSLEHLELNVKAS- 52
           F Q  I +  + S Y  QL  L  ++    +    +R    N P L +++HLE+    S 
Sbjct: 282 FCQLTIENLYQFSLYILQLETLRFDVGSAYL----MREFPTNFPILSNVKHLEVTTAVSA 337

Query: 51  VGGSLHFFTSLIKASPL 1
           V   L    SL+K  PL
Sbjct: 338 VAHCLFPCLSLLKGCPL 354


>gb|EOY00981.1| Ubiquitin-protein ligase, putative [Theobroma cacao]
          Length = 445

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
 Frame = -1

Query: 375 LKVLEISGC-TIHSLEVSVMNLVSCTYQGNEIILPFKEIPNLSELTLGG--DFAQFFIYD 205
           L+ LEI  C  + +LE+S  NL S  Y G ++ L  +  P+L+++ +GG  D    F + 
Sbjct: 218 LRYLEIHSCLALENLEISAPNLWSFRYYGQKMALHIENAPHLADVLIGGNLDDQPAFAFY 277

Query: 204 PDKHSSYSAQLVKLALNIQWKEIARRELRYVRPNLPRLYSLEHLELNVKASVGGSLHFFT 25
           P   SSY  QL  L L     E++   + +  PN P+L +L HL ++V      +L   T
Sbjct: 278 P--LSSYLCQLETLTL-----EMSAYNMMF--PNFPQLTNLRHLVVSVYGGYDDNLLVLT 328

Query: 24  SLIKASP 4
           SLI ASP
Sbjct: 329 SLIDASP 335


>gb|ESW04240.1| hypothetical protein PHAVU_011G078500g [Phaseolus vulgaris]
          Length = 456

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
 Frame = -1

Query: 426 RGSSLTKNLQVVDPLPNLKVLEISGCTIHSLEVSVMNLVSCTYQGNEIILPFKEIPNLSE 247
           RGS   ++L+V      LK LE+  C I  L++   NL++ TY G+   L F+ +P+L E
Sbjct: 209 RGSKSLESLKVQGEGLRLKHLELVECHILCLDICAENLMTFTYTGDYGKLNFEAVPSLVE 268

Query: 246 LTLGGDFAQFFIYDPDKHSSY----SAQLVKLALNIQWKEIARRELRYVRPNLPRLYSLE 79
            + GG +  + + + +    Y       ++KL L I + EI          +LP L ++ 
Sbjct: 269 ASFGGKYCNYLLSNMNDVELYGVLSQVHVLKLELFILYGEILE--------DLPVLGNVR 320

Query: 78  HLELNVKASVGGSLHFFTSLIKASP 4
            LEL ++   GG L    SL+ + P
Sbjct: 321 QLELRIRHRCGGQLDRTVSLLSSFP 345


>ref|XP_006600804.1| PREDICTED: putative F-box protein At3g58860-like [Glycine max]
          Length = 449

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
 Frame = -1

Query: 420 SSLTKNLQVVDPLPNLKVLEISGC-TIHSLEVSVMNLVSCTYQGNEIILPFKEIPNLSEL 244
           S + K ++V  P   LK LE+  C  +  LE+   NL+S  Y G+ +   FK +P L E 
Sbjct: 212 SGVPKTMKVSGPSLKLKCLELVRCWELIKLEIFAENLMSFKYYGSHLDTEFKSVPCLVEA 271

Query: 243 TLGGDFAQFFIYDPDKHSSYSAQLVKLALNIQWKEIARRELRYVRPNLPRLYSLEHLEL 67
           T GG F +F         S+  Q+  L L+I   E    ++ +    LP+L +L+HLEL
Sbjct: 272 TFGGSFVEF------TRESFLPQIKVLKLDITQNE---PQVLFRLSQLPKLKNLKHLEL 321


>gb|EOY20631.1| Ubiquitin-protein ligase-like protein [Theobroma cacao]
          Length = 340

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 43/139 (30%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
 Frame = -1

Query: 405 NLQVVDPLPNLKVLEISGC-TIHSLEVSVMNLVSCTYQGNEIILPFKEIPNLSELTLGGD 229
           +L   D   NLK LE+  C ++  +E+  +NLVS  Y G++ +     +P+L+EL +GG+
Sbjct: 139 HLLSADASANLKCLELRNCHSLKKVEIYAVNLVSLFYNGSDGVPVTLNLPHLAELLVGGN 198

Query: 228 FAQFFIYDPDKHSSYSAQLVKLALNIQWKEIARRELRYVRPNLPRLYSLEHLELNVKASV 49
           +    IY   +     +QL  L+ ++       +   +++ N+P L +L+HLEL  ++ +
Sbjct: 199 YLH-QIYHLSQLQIILSQLESLSFDVS----GAKAWPFLK-NIPTLSNLKHLEL--ESGI 250

Query: 48  GGSLHF---FTSLIKASPL 1
            G  H    FTSL+ A+PL
Sbjct: 251 TGVSHSFLPFTSLLTAAPL 269


>ref|XP_003608851.1| F-box family-6 [Medicago truncatula] gi|355509906|gb|AES91048.1|
           F-box family-6 [Medicago truncatula]
          Length = 447

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
 Frame = -1

Query: 420 SSLTKNLQVVDPLPNLKVLEISGC-TIHSLEVSVMNLVSCTYQGNEIILPFKEIPNLSEL 244
           S + K ++V      LK LE+  C  +  +E+    LVS  Y G+ +   FK +P L E 
Sbjct: 210 SRVPKTMKVSGSSLKLKCLELVRCWELTKIEIFAEKLVSFKYYGSHLETEFKSVPCLEEA 269

Query: 243 TLGGDFAQFFIYDPDKHSSYSAQLVKLALNIQWKEIARRELRYVRPNLPRLYSLEHLELN 64
           + GG F +F         S+  Q+  L L+I        E+ Y    LP+L +L+HLEL 
Sbjct: 270 SFGGSFVEFV------RESFLPQIKVLKLDITQNS---PEVIYWLSQLPKLKNLKHLELV 320

Query: 63  VKASVGGSLHFFTSLIKASP 4
             A  G  +     L+KASP
Sbjct: 321 ACADDG--ISACVMLLKASP 338


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