BLASTX nr result
ID: Rehmannia26_contig00023021
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00023021
(398 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_173692.1| 40S ribosomal protein S18 [Arabidopsis thaliana... 70 4e-10
ref|XP_006306532.1| hypothetical protein CARUB_v10012556mg, part... 70 4e-10
ref|XP_006288747.1| hypothetical protein CARUB_v10002063mg, part... 70 4e-10
gb|AAK43840.1|AF370463_1 S18.A ribosomal protein [Arabidopsis th... 70 4e-10
ref|XP_002307515.1| 40S ribosomal protein S18 [Populus trichocar... 69 6e-10
ref|XP_002302108.1| hypothetical protein POPTR_0002s05220g [Popu... 69 6e-10
ref|XP_002306780.1| hypothetical protein POPTR_0005s23280g [Popu... 69 6e-10
ref|XP_006305745.1| hypothetical protein CARUB_v10010553mg [Caps... 68 1e-09
gb|ESW15538.1| hypothetical protein PHAVU_007G080500g [Phaseolus... 68 1e-09
ref|XP_006434520.1| hypothetical protein CICLE_v10002764mg [Citr... 67 2e-09
ref|XP_004496437.1| PREDICTED: 40S ribosomal protein S18-like [C... 67 2e-09
gb|EMJ27040.1| hypothetical protein PRUPE_ppa011659mg [Prunus pe... 67 2e-09
ref|XP_006415047.1| hypothetical protein EUTSA_v10009003mg [Eutr... 67 2e-09
ref|XP_004489927.1| PREDICTED: 40S ribosomal protein S18-like [C... 67 2e-09
gb|ADR71282.1| 40S ribosomal protein S18C [Hevea brasiliensis] 67 2e-09
gb|ACS96445.1| S18.A ribosomal protein [Jatropha curcas] 67 2e-09
gb|ACM90157.1| S18 ribosomal protein [Jatropha curcas] 67 2e-09
ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus... 67 2e-09
gb|AAR83860.1| putative ribosomal protein [Capsicum annuum] 67 2e-09
ref|XP_006419931.1| hypothetical protein CICLE_v10006140mg [Citr... 67 3e-09
>ref|NP_173692.1| 40S ribosomal protein S18 [Arabidopsis thaliana]
gi|15234790|ref|NP_192718.1| 40S ribosomal protein S18
[Arabidopsis thaliana] gi|18399100|ref|NP_564434.1| 40S
ribosomal protein S18 [Arabidopsis thaliana]
gi|297809155|ref|XP_002872461.1| hypothetical protein
ARALYDRAFT_489832 [Arabidopsis lyrata subsp. lyrata]
gi|297845304|ref|XP_002890533.1| hypothetical protein
ARALYDRAFT_472522 [Arabidopsis lyrata subsp. lyrata]
gi|297851838|ref|XP_002893800.1| hypothetical protein
ARALYDRAFT_473557 [Arabidopsis lyrata subsp. lyrata]
gi|464707|sp|P34788.1|RS18_ARATH RecName: Full=40S
ribosomal protein S18
gi|10086474|gb|AAG12534.1|AC015446_15 ribosomal protein
S18 [Arabidopsis thaliana]
gi|10092450|gb|AAG12853.1|AC079286_10 40S ribosomal
protein S18; 25853-24673 [Arabidopsis thaliana]
gi|14423408|gb|AAK62386.1|AF386941_1 S18.A ribosomal
protein [Arabidopsis thaliana]
gi|15724158|gb|AAL06471.1|AF411781_1 At1g22780/T22J18_5
[Arabidopsis thaliana] gi|405613|emb|CAA80684.1|
ribosomal protein S18A [Arabidopsis thaliana]
gi|434343|emb|CAA82273.1| S18 ribosomal protein
[Arabidopsis thaliana] gi|434345|emb|CAA82274.1| S18
ribosomal protein [Arabidopsis thaliana]
gi|434906|emb|CAA82275.1| S18 ribosomal protein
[Arabidopsis thaliana] gi|2505871|emb|CAA72909.1|
ribosomal protein S18A [Arabidopsis thaliana]
gi|3287678|gb|AAC25506.1| Match to ribosomal S18 gene
mRNA gb|Z28701, DNA gb|Z23165 from A. thaliana. ESTs
gb|T21121, gb|Z17755, gb|R64776 and gb|R30430 come from
this gene [Arabidopsis thaliana]
gi|4538910|emb|CAB39647.1| S18.A ribosomal protein
[Arabidopsis thaliana] gi|7267675|emb|CAB78103.1| S18.A
ribosomal protein [Arabidopsis thaliana]
gi|14334584|gb|AAK59471.1| putative ribosomal protein
S18 [Arabidopsis thaliana] gi|17979113|gb|AAL47500.1|
putative ribosomal protein S18 [Arabidopsis thaliana]
gi|21555397|gb|AAM63849.1| ribosomal protein S18,
putative [Arabidopsis thaliana]
gi|21592452|gb|AAM64403.1| ribosomal protein S18,
putative [Arabidopsis thaliana]
gi|21593027|gb|AAM64976.1| ribosomal protein S18,
putative [Arabidopsis thaliana]
gi|30102858|gb|AAP21347.1| At4g09800 [Arabidopsis
thaliana] gi|56236126|gb|AAV84519.1| At1g22780
[Arabidopsis thaliana] gi|98961089|gb|ABF59028.1|
At1g22780 [Arabidopsis thaliana]
gi|145713244|gb|ABP96570.1| pointed first leaf
[Arabidopsis thaliana] gi|145713246|gb|ABP96571.1|
pointed first leaf [Arabidopsis thaliana]
gi|145713248|gb|ABP96572.1| pointed first leaf
[Arabidopsis thaliana] gi|145713250|gb|ABP96573.1|
pointed first leaf [Arabidopsis thaliana]
gi|145713252|gb|ABP96574.1| pointed first leaf
[Arabidopsis thaliana] gi|145713254|gb|ABP96575.1|
pointed first leaf [Arabidopsis thaliana]
gi|145713256|gb|ABP96576.1| pointed first leaf
[Arabidopsis thaliana] gi|145713258|gb|ABP96577.1|
pointed first leaf [Arabidopsis thaliana]
gi|145713260|gb|ABP96578.1| pointed first leaf
[Arabidopsis thaliana] gi|145713262|gb|ABP96579.1|
pointed first leaf [Arabidopsis thaliana]
gi|145713264|gb|ABP96580.1| pointed first leaf
[Arabidopsis thaliana] gi|145713266|gb|ABP96581.1|
pointed first leaf [Arabidopsis thaliana]
gi|145713268|gb|ABP96582.1| pointed first leaf
[Arabidopsis thaliana] gi|145713270|gb|ABP96583.1|
pointed first leaf [Arabidopsis thaliana]
gi|145713272|gb|ABP96584.1| pointed first leaf
[Arabidopsis thaliana] gi|145713274|gb|ABP96585.1|
pointed first leaf [Arabidopsis thaliana]
gi|145713276|gb|ABP96586.1| pointed first leaf
[Arabidopsis thaliana] gi|145713278|gb|ABP96587.1|
pointed first leaf [Arabidopsis thaliana]
gi|145713280|gb|ABP96588.1| pointed first leaf
[Arabidopsis thaliana] gi|145713282|gb|ABP96589.1|
pointed first leaf [Arabidopsis thaliana]
gi|145713284|gb|ABP96590.1| pointed first leaf
[Arabidopsis thaliana] gi|297318298|gb|EFH48720.1|
hypothetical protein ARALYDRAFT_489832 [Arabidopsis
lyrata subsp. lyrata] gi|297336375|gb|EFH66792.1|
hypothetical protein ARALYDRAFT_472522 [Arabidopsis
lyrata subsp. lyrata] gi|297339642|gb|EFH70059.1|
hypothetical protein ARALYDRAFT_473557 [Arabidopsis
lyrata subsp. lyrata] gi|332192166|gb|AEE30287.1| 40S
ribosomal protein S18 [Arabidopsis thaliana]
gi|332193538|gb|AEE31659.1| 40S ribosomal protein S18
[Arabidopsis thaliana] gi|332657400|gb|AEE82800.1| 40S
ribosomal protein S18 [Arabidopsis thaliana]
Length = 152
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSAAEI LMT+V NPRQFKIPD+FLNRQK Y +DGKYSQ S +
Sbjct: 57 GELSAAEIDNLMTIVANPRQFKIPDWFLNRQKDY-KDGKYSQVVSNA 102
>ref|XP_006306532.1| hypothetical protein CARUB_v10012556mg, partial [Capsella rubella]
gi|482575243|gb|EOA39430.1| hypothetical protein
CARUB_v10012556mg, partial [Capsella rubella]
Length = 122
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSAAEI LMT+V NPRQFKIPD+FLNRQK Y +DGKYSQ S +
Sbjct: 62 GELSAAEIDNLMTIVANPRQFKIPDWFLNRQKDY-KDGKYSQVVSNA 107
>ref|XP_006288747.1| hypothetical protein CARUB_v10002063mg, partial [Capsella rubella]
gi|482557453|gb|EOA21645.1| hypothetical protein
CARUB_v10002063mg, partial [Capsella rubella]
Length = 183
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSAAEI LMT+V NPRQFKIPD+FLNRQK Y +DGKYSQ S +
Sbjct: 88 GELSAAEIDNLMTIVANPRQFKIPDWFLNRQKDY-KDGKYSQVVSNA 133
>gb|AAK43840.1|AF370463_1 S18.A ribosomal protein [Arabidopsis thaliana]
gi|17978783|gb|AAL47385.1| S18.A ribosomal protein
[Arabidopsis thaliana]
Length = 152
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSAAEI LMT+V NPRQFKIPD+FLNRQK Y +DGKYSQ S +
Sbjct: 57 GELSAAEIDNLMTIVANPRQFKIPDWFLNRQKDY-KDGKYSQVVSNA 102
>ref|XP_002307515.1| 40S ribosomal protein S18 [Populus trichocarpa]
gi|222856964|gb|EEE94511.1| 40S ribosomal protein S18
[Populus trichocarpa]
Length = 152
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSAAE+ LMT+V NPRQFKIPD+FLNRQK Y +DGKYSQ S +
Sbjct: 57 GELSAAELDNLMTIVANPRQFKIPDWFLNRQKDY-KDGKYSQVVSNA 102
>ref|XP_002302108.1| hypothetical protein POPTR_0002s05220g [Populus trichocarpa]
gi|118481417|gb|ABK92651.1| unknown [Populus
trichocarpa] gi|222843834|gb|EEE81381.1| hypothetical
protein POPTR_0002s05220g [Populus trichocarpa]
Length = 152
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSA E+ KLMT+V NPRQFKIPD+FLNRQK Y +DGKYSQ S +
Sbjct: 57 GELSAEELDKLMTIVANPRQFKIPDWFLNRQKDY-KDGKYSQVVSNA 102
>ref|XP_002306780.1| hypothetical protein POPTR_0005s23280g [Populus trichocarpa]
gi|118481499|gb|ABK92692.1| unknown [Populus
trichocarpa] gi|222856229|gb|EEE93776.1| hypothetical
protein POPTR_0005s23280g [Populus trichocarpa]
Length = 152
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSA E+ KLMT+V NPRQFKIPD+FLNRQK Y +DGKYSQ S +
Sbjct: 57 GELSAEELDKLMTIVANPRQFKIPDWFLNRQKDY-KDGKYSQVVSNA 102
>ref|XP_006305745.1| hypothetical protein CARUB_v10010553mg [Capsella rubella]
gi|482574456|gb|EOA38643.1| hypothetical protein
CARUB_v10010553mg [Capsella rubella]
Length = 152
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSAAEI LM++V NPRQFKIPD+FLNRQK Y +DGKYSQ S +
Sbjct: 57 GELSAAEIDNLMSIVANPRQFKIPDWFLNRQKDY-KDGKYSQVVSNA 102
>gb|ESW15538.1| hypothetical protein PHAVU_007G080500g [Phaseolus vulgaris]
gi|561016766|gb|ESW15570.1| hypothetical protein
PHAVU_007G083400g [Phaseolus vulgaris]
Length = 152
Score = 67.8 bits (164), Expect = 1e-09
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSAAE+ LMTVV NPRQFKIPD+FLNR+K Y +DGKYSQ S +
Sbjct: 57 GELSAAELDNLMTVVANPRQFKIPDWFLNRKKDY-KDGKYSQVVSNA 102
>ref|XP_006434520.1| hypothetical protein CICLE_v10002764mg [Citrus clementina]
gi|568838213|ref|XP_006473109.1| PREDICTED: 40S
ribosomal protein S18-like [Citrus sinensis]
gi|557536642|gb|ESR47760.1| hypothetical protein
CICLE_v10002764mg [Citrus clementina]
Length = 152
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSAAE+ LM VV NPRQFKIPD+FLNRQK Y +DGKYSQ S +
Sbjct: 57 GELSAAELDNLMVVVANPRQFKIPDWFLNRQKDY-KDGKYSQVVSNA 102
>ref|XP_004496437.1| PREDICTED: 40S ribosomal protein S18-like [Cicer arietinum]
gi|502118979|ref|XP_004496465.1| PREDICTED: 40S
ribosomal protein S18-like [Cicer arietinum]
Length = 152
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSAAE+ LMTVV NPRQFKIPD+FLNR+K Y +DGK+SQ S S
Sbjct: 57 GELSAAELDNLMTVVANPRQFKIPDWFLNRKKDY-KDGKFSQVVSNS 102
>gb|EMJ27040.1| hypothetical protein PRUPE_ppa011659mg [Prunus persica]
Length = 202
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSAAE+ LMT+V NPRQFKIPD+FLNR+K Y +DGKYSQ S +
Sbjct: 107 GELSAAELDNLMTIVANPRQFKIPDWFLNRKKDY-KDGKYSQVVSNA 152
>ref|XP_006415047.1| hypothetical protein EUTSA_v10009003mg [Eutrema salsugineum]
gi|567163760|ref|XP_006397143.1| hypothetical protein
EUTSA_v10029039mg [Eutrema salsugineum]
gi|557092818|gb|ESQ33400.1| hypothetical protein
EUTSA_v10009003mg [Eutrema salsugineum]
gi|557098160|gb|ESQ38596.1| hypothetical protein
EUTSA_v10029039mg [Eutrema salsugineum]
Length = 152
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQ 286
GELSAAEI LMT+V NP+Q+KIPD+FLNRQK Y +DGKYSQ
Sbjct: 57 GELSAAEIDNLMTIVANPKQYKIPDWFLNRQKDY-KDGKYSQ 97
>ref|XP_004489927.1| PREDICTED: 40S ribosomal protein S18-like [Cicer arietinum]
Length = 152
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GEL+AAE+ +MTVV NPRQFKIPD+FLNR+K Y +DGKYSQ S S
Sbjct: 57 GELTAAELDNIMTVVANPRQFKIPDWFLNRKKDY-KDGKYSQVVSNS 102
>gb|ADR71282.1| 40S ribosomal protein S18C [Hevea brasiliensis]
Length = 152
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSA E+ KLM +V NPRQFKIPD+FLNRQK Y +DGKYSQ S +
Sbjct: 57 GELSAEELDKLMVIVANPRQFKIPDWFLNRQKDY-KDGKYSQVVSNA 102
>gb|ACS96445.1| S18.A ribosomal protein [Jatropha curcas]
Length = 152
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSA E+ KLM +V NPRQFKIPD+FLNRQK Y +DGKYSQ S +
Sbjct: 57 GELSAEELDKLMVIVANPRQFKIPDWFLNRQKDY-KDGKYSQVVSNA 102
>gb|ACM90157.1| S18 ribosomal protein [Jatropha curcas]
Length = 152
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSA E+ KLM +V NPRQFKIPD+FLNRQK Y +DGKYSQ S +
Sbjct: 57 GELSAEELDKLMVIVANPRQFKIPDWFLNRQKDY-KDGKYSQVVSNA 102
>ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus communis]
gi|223540104|gb|EEF41681.1| 40S ribosomal protein S18,
putative [Ricinus communis] gi|313586541|gb|ADR71281.1|
40S ribosomal protein S18A [Hevea brasiliensis]
Length = 152
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSA E+ KLM +V NPRQFKIPD+FLNRQK Y +DGKYSQ S +
Sbjct: 57 GELSAEELDKLMVIVANPRQFKIPDWFLNRQKDY-KDGKYSQVVSNA 102
>gb|AAR83860.1| putative ribosomal protein [Capsicum annuum]
Length = 152
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSAAE+ LM VV NPRQFKIPD+FLNRQK Y +DGK+SQ +S +
Sbjct: 57 GELSAAELDSLMVVVANPRQFKIPDWFLNRQKDY-KDGKFSQVTSNA 102
>ref|XP_006419931.1| hypothetical protein CICLE_v10006140mg [Citrus clementina]
gi|568872460|ref|XP_006489386.1| PREDICTED: 40S
ribosomal protein S18-like [Citrus sinensis]
gi|557521804|gb|ESR33171.1| hypothetical protein
CICLE_v10006140mg [Citrus clementina]
Length = 152
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = +2
Query: 161 GELSAAEISKLMTVVVNPRQFKIPDYFLNRQKAYVQDGKYSQKSSRS 301
GELSAAE+ +LM VV NPRQFKIPD+FLNRQK Y +DG+YSQ S +
Sbjct: 57 GELSAAELDQLMVVVANPRQFKIPDWFLNRQKDY-KDGRYSQVVSNA 102