BLASTX nr result
ID: Rehmannia26_contig00022982
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00022982
(561 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera] 49 8e-13
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 71 2e-10
emb|CAN71996.1| hypothetical protein VITISV_023485 [Vitis vinifera] 44 4e-10
gb|ACN32036.1| unknown [Zea mays] 68 1e-09
gb|ACL54615.1| unknown [Zea mays] 68 1e-09
emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera] 66 5e-09
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 65 9e-09
emb|CAN68496.1| hypothetical protein VITISV_010947 [Vitis vinifera] 64 3e-08
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 63 6e-08
gb|ABA94311.1| retrotransposon protein, putative, Ty1-copia subc... 59 8e-07
emb|CAN63482.1| hypothetical protein VITISV_011510 [Vitis vinifera] 59 8e-07
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 57 4e-06
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc... 55 9e-06
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera] 55 9e-06
emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera] 39 1e-05
>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
Length = 920
Score = 49.3 bits (116), Expect(3) = 8e-13
Identities = 30/101 (29%), Positives = 47/101 (46%)
Frame = -3
Query: 559 NNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMS 380
+ KP+CQ+C HTA C++R DI Q AS S
Sbjct: 134 SEKPQCQLCGKFGHTAQICYHRFDISFQGGXTTTSPSLNNGN------QNNILAMVASFS 187
Query: 379 SVEDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQL 257
+ + ++ W+ +SGA++H+T +L NL S Y G +V +
Sbjct: 188 N--SSADESWYLDSGASHHLTQNLGNLTSTSPYTGTDRVTI 226
Score = 38.9 bits (89), Expect(3) = 8e-13
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -3
Query: 70 LWHSRLGHVALDVVKRALRSCNI 2
LWH+RLGHVA D+V + + +CN+
Sbjct: 305 LWHNRLGHVASDIVSKVMNTCNV 327
Score = 30.4 bits (67), Expect(3) = 8e-13
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 255 EMDQDLQTRMVLLKGKVKDGLYCFTLSSVNGDPPQLTSHPN--HQHIEHALVN 103
++ +D T+MVL +GK+++GLY F + S N P ++ + H H + N
Sbjct: 250 QLKKDRHTKMVLAQGKLENGLYKFPVFS-NKKPYSSVNNASAFHSHFSSTIEN 301
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 70.9 bits (172), Expect = 2e-10
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 20/124 (16%)
Frame = -3
Query: 553 KPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNA------ 392
KP+CQ+C+ HT H+C+YR D G+ +A
Sbjct: 180 KPQCQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGSISSAGNVNLT 239
Query: 391 --------------ASMSSVEDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQLR 254
A +++ ED Q WFP+SGATNHVT+DL NLN +EY G K+ +
Sbjct: 240 EYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNSKIHMG 299
Query: 253 DGSG 242
+G+G
Sbjct: 300 NGTG 303
>emb|CAN71996.1| hypothetical protein VITISV_023485 [Vitis vinifera]
Length = 1087
Score = 43.5 bits (101), Expect(3) = 4e-10
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 13/114 (11%)
Frame = -3
Query: 559 NNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMS 380
+ KP+CQ+C HTA C++ DI Q G T+ + S++
Sbjct: 134 SEKPQCQLCGKFGHTAQICYHXFDISF---------------------QGGQTITSPSLN 172
Query: 379 SVEDNQ-------------EDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQL 257
+ N ++ W+ + GA++H+T +L N S Y G +V +
Sbjct: 173 NGNQNNIXAMVASSSNSPADESWYLDFGASHHLTQNLGNXTSTSPYTGTDRVTI 226
Score = 37.4 bits (85), Expect(3) = 4e-10
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 70 LWHSRLGHVALDVVKRALRSCNI 2
LWH+RLGH A D+V + + +CN+
Sbjct: 296 LWHNRLGHAASDIVSKVMNTCNV 318
Score = 28.5 bits (62), Expect(3) = 4e-10
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1
Query: 246 QDLQTRMVLLKGKVKDGLYCFTLSS 172
+D T+MVL +GK+++GLY F + S
Sbjct: 244 KDRHTKMVLAQGKLENGLYKFPMFS 268
>gb|ACN32036.1| unknown [Zea mays]
Length = 376
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/112 (32%), Positives = 57/112 (50%)
Frame = -3
Query: 544 CQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMSSVEDN 365
CQIC NH A +CW+R D +Q +TV A+ ++ E
Sbjct: 285 CQICGKGNHNALQCWHRFD---------------------QAYQAESTVKQAAAATHEYA 323
Query: 364 QEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQLRDGSGPSNKNGAPQRE 209
+ +W+ +SGAT+H+T DLE L Y G K+Q+ +G+G S++ + QR+
Sbjct: 324 VDPNWYMDSGATDHITSDLERLTTRERYTGGDKIQVANGAGSSHEASSSQRQ 375
>gb|ACL54615.1| unknown [Zea mays]
Length = 376
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/112 (32%), Positives = 57/112 (50%)
Frame = -3
Query: 544 CQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMSSVEDN 365
CQIC NH A +CW+R D +Q +TV A+ ++ E
Sbjct: 285 CQICGKGNHNALQCWHRFD---------------------QAYQAESTVKQAAAATHEYA 323
Query: 364 QEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQLRDGSGPSNKNGAPQRE 209
+ +W+ +SGAT+H+T DLE L Y G K+Q+ +G+G S++ + QR+
Sbjct: 324 VDPNWYMDSGATDHITSDLERLTTRERYTGGDKIQVANGAGSSHEASSSQRQ 375
>emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]
Length = 955
Score = 66.2 bits (160), Expect = 5e-09
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 20/124 (16%)
Frame = -3
Query: 553 KPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMSSV 374
KP+CQ+C+ HT H+C+YR D G+ +A +++
Sbjct: 182 KPQCQLCNKFGHTVHRCFYRYDPNFHGNMXANGPTPGVLGSGARNGAXGSISSAGNVNLT 241
Query: 373 E-DNQEDH-------------------WFPNSGATNHVTYDLENLNIASEYAGPGKVQLR 254
E D QED WFP+S ATNHVT+DL NLN +EY G K+ +
Sbjct: 242 EYDAQEDQDYSEMEAMVATXEDLQNCCWFPDSRATNHVTHDLGNLNSGAEYNGNSKIHMG 301
Query: 253 DGSG 242
+ +G
Sbjct: 302 NETG 305
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 65.5 bits (158), Expect = 9e-09
Identities = 38/113 (33%), Positives = 53/113 (46%)
Frame = -3
Query: 559 NNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMS 380
NN+P CQ+C HT HKCW R D + A V AAS
Sbjct: 189 NNRPTCQLCGKIGHTVHKCWKRFDASFTGE------------------DKSANV-AASSY 229
Query: 379 SVEDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQLRDGSGPSNKNGA 221
V+ N W+ +SGAT+H+T +L+ L + +YAG +V GSG + G+
Sbjct: 230 EVDTN----WYIDSGATDHITSELDKLTVKDKYAGNDQVHTASGSGVAQIGGS 278
>emb|CAN68496.1| hypothetical protein VITISV_010947 [Vitis vinifera]
Length = 1539
Score = 63.9 bits (154), Expect = 3e-08
Identities = 47/183 (25%), Positives = 77/183 (42%)
Frame = -3
Query: 553 KPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMSSV 374
+P+CQ+C HT KC++R DI Q + + A M +
Sbjct: 551 RPQCQLCGKFGHTVVKCYHRFDI------------TYQGTNGVSSSQDSSPLQA--MLAA 596
Query: 373 EDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQLRDGSGPSNKNGAPQRES*GWA 194
N +D WF ++GAT+H+++ + L+ Y+G +V + DG N
Sbjct: 597 TPNHQDSWFFDTGATHHLSHSAQTLSHVQPYSGADQVTIGDGHSLPILNTD--------Q 648
Query: 193 ILLHFV*RQW*STSAHVSPKPSTH*TCIS*FYVFPK*I*SGLWHSRLGHVALDVVKRALR 14
+ + + W + P S+ +S V P +WHSRLGH ++ +AL
Sbjct: 649 VTKQTLLKGWLRDGLYEFPSSSSTHAFVSTSSV-PALTPGAIWHSRLGHPXXPILSKALA 707
Query: 13 SCN 5
SCN
Sbjct: 708 SCN 710
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 62.8 bits (151), Expect = 6e-08
Identities = 34/111 (30%), Positives = 54/111 (48%)
Frame = -3
Query: 559 NNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMS 380
N KP CQ+C H +C+YR D Q + + +
Sbjct: 305 NEKPACQLCGKIGHVVAQCYYRFDHTFQVPQNLSSRNSSPRAYYSFSPQVNGVIPTSEVF 364
Query: 379 SVEDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQLRDGSGPSNKN 227
S +D+W+P+SGA+NHVT + ENL ++E+AG +V + +G+G S K+
Sbjct: 365 S-----DDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGNGTGLSIKH 410
>gb|ABA94311.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 339
Score = 58.9 bits (141), Expect = 8e-07
Identities = 34/115 (29%), Positives = 53/115 (46%)
Frame = -3
Query: 553 KPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMSSV 374
+P CQ+C HT KCWYR D +Q V AA+ +S
Sbjct: 246 RPVCQLCGKTGHTVIKCWYRFD---------------------QTYQPEEKVAAAATNSA 284
Query: 373 EDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQLRDGSGPSNKNGAPQRE 209
+ +W+ + GAT+H+T +L+ L+I +Y G +V +GSG N+ R+
Sbjct: 285 Y-GVDTNWYVDCGATDHITGELDKLSIREKYNGLDQVHATNGSGSGNEEATTSRQ 338
>emb|CAN63482.1| hypothetical protein VITISV_011510 [Vitis vinifera]
Length = 1124
Score = 58.9 bits (141), Expect = 8e-07
Identities = 36/108 (33%), Positives = 47/108 (43%), Gaps = 17/108 (15%)
Frame = -3
Query: 553 KPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMSSV 374
KP+CQ+ + HT H C+YR D G+ +A +++
Sbjct: 248 KPQCQLSNKFGHTIHHCFYRYDPNFHGNMPANGHTPGVLGSGARNGASGSISSAGNVNLT 307
Query: 373 E-DNQEDH----------------WFPNSGATNHVTYDLENLNIASEY 281
E D QED WFP+SGATNHVT+DL NLN EY
Sbjct: 308 EYDAQEDQDCSEMVATPKDLQNCCWFPDSGATNHVTHDLGNLNFGXEY 355
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 56.6 bits (135), Expect = 4e-06
Identities = 30/111 (27%), Positives = 53/111 (47%)
Frame = -3
Query: 559 NNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMS 380
+++PRCQ+C HTA CWYR D QR +A+ +
Sbjct: 277 SSRPRCQVCSRVGHTALNCWYRFD------------------ENYVPDQR-----SANSA 313
Query: 379 SVEDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQLRDGSGPSNKN 227
+ ++ W+ ++GAT+H+T DL+ L + +Y G ++ +G+G + N
Sbjct: 314 AHQNGSNVPWYTDTGATDHITGDLDRLTMHDKYTGTDQIIAANGTGMTISN 364
>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 55.5 bits (132), Expect = 9e-06
Identities = 30/109 (27%), Positives = 49/109 (44%)
Frame = -3
Query: 553 KPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMSSV 374
+P CQ+C+ H A KCW+R D +R A + +V
Sbjct: 245 RPICQVCYKRGHVAAKCWHRFD------------------ENYVPDERHVAAAAQAAYAV 286
Query: 373 EDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQLRDGSGPSNKN 227
+ N W+ +SGAT+H+T +L+ L + +Y G K+ +G G K+
Sbjct: 287 DTN----WYIDSGATDHITSELDKLTVREKYKGTEKIHTANGVGMQIKH 331
>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
Length = 1361
Score = 55.5 bits (132), Expect = 9e-06
Identities = 30/104 (28%), Positives = 45/104 (43%)
Frame = -3
Query: 559 NNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMS 380
N+ CQ+C H A +CW L + Q A S
Sbjct: 384 NSSVHCQLCDKEGHLAKRCWNFLKLKKK--------------------QSANLAEAFSAY 423
Query: 379 SVEDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQLRDG 248
S++D + WFP+SGAT+H+T D E +N Y+G +V + +G
Sbjct: 424 SIQDFNDSEWFPDSGATSHMTSDTEGVNQPDVYSGNERVMVGNG 467
>emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]
Length = 1138
Score = 38.5 bits (88), Expect(3) = 1e-05
Identities = 15/39 (38%), Positives = 28/39 (71%)
Frame = -3
Query: 361 EDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQLRDGS 245
+D+W+P+ GA+NHVT++ NL + E+A +V + +G+
Sbjct: 355 DDNWYPDPGASNHVTHNPANLMKSVEFARQNQVHVGNGT 393
Score = 29.3 bits (64), Expect(3) = 1e-05
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 234 TRMVLLKGKVKDGLYCFTLSSVNGDPPQLTS 142
T+ VL+ GKV+DGLY F S + P Q S
Sbjct: 419 TQAVLMVGKVRDGLYAFDSSHLALRPTQSLS 449
Score = 26.2 bits (56), Expect(3) = 1e-05
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 70 LWHSRLGHVALDVVKRAL 17
LWH RLGH + ++K L
Sbjct: 474 LWHRRLGHPSAAIIKNVL 491