BLASTX nr result

ID: Rehmannia26_contig00022529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00022529
         (399 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB62508.1| Putative F-box protein [Morus notabilis]                63   5e-08
ref|XP_004309907.1| PREDICTED: putative F-box protein At1g12855-...    58   1e-06
ref|XP_004309906.1| PREDICTED: putative F-box protein At1g12855-...    58   1e-06
ref|XP_006376129.1| hypothetical protein POPTR_0013s10060g [Popu...    55   1e-05
ref|XP_006376127.1| hypothetical protein POPTR_0013s10060g [Popu...    55   1e-05
ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|5...    55   1e-05

>gb|EXB62508.1| Putative F-box protein [Morus notabilis]
          Length = 389

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 44/111 (39%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
 Frame = +2

Query: 2   FLALRQGRIEMSRY--SCKFNIPFWATCNGLIVLVDRHNHKAIYITNPVTKQIFVIPLFT 175
           FL L+ G+ ++  Y  SC  NI   ATCNGLI+L D+     + I NPVT+++  +PL T
Sbjct: 121 FLELKNGKCQIGEYNISCLGNIR--ATCNGLILLDDKMKKGGLVIMNPVTRKLMPLPLGT 178

Query: 176 SHILFKELCGIAYAMASMQYKVVVTHDPDGVLKGQRCAILTVGVDKSWRNV 328
                 E  G A +  S +YKVV  H     L    C IL +G  +SWR V
Sbjct: 179 LSSRHDESYGFALSKISGEYKVV--HLFQDYLGYISCEILNIGT-RSWREV 226


>ref|XP_004309907.1| PREDICTED: putative F-box protein At1g12855-like isoform 2
           [Fragaria vesca subsp. vesca]
          Length = 349

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
 Frame = +2

Query: 2   FLALRQGRIEMSRY--SCKFNIPFWATCNGLIVLVDRHNHKAIYITNPVTKQIFVIPLFT 175
           FLA++ G+ E+  Y  SC  NI   ATCNGLI+L ++     + + NPVT+++  +PL T
Sbjct: 75  FLAIKNGKAEIGGYGLSCLGNIR--ATCNGLILLDNKVKKGGLIVLNPVTRKLIALPLGT 132

Query: 176 SHILFKELCGIAYAMASMQYKVV-VTHDPDGVLKGQRCAILTVGVDKSWRNV 328
               + E  G A +  + +YK+V +  D  G +    C IL++   K+WR V
Sbjct: 133 LQPPYNESYGFALSDVTGEYKIVHLFRDELGFVS---CEILSLR-KKAWREV 180


>ref|XP_004309906.1| PREDICTED: putative F-box protein At1g12855-like isoform 1
           [Fragaria vesca subsp. vesca]
          Length = 419

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
 Frame = +2

Query: 2   FLALRQGRIEMSRY--SCKFNIPFWATCNGLIVLVDRHNHKAIYITNPVTKQIFVIPLFT 175
           FLA++ G+ E+  Y  SC  NI   ATCNGLI+L ++     + + NPVT+++  +PL T
Sbjct: 145 FLAIKNGKAEIGGYGLSCLGNIR--ATCNGLILLDNKVKKGGLIVLNPVTRKLIALPLGT 202

Query: 176 SHILFKELCGIAYAMASMQYKVV-VTHDPDGVLKGQRCAILTVGVDKSWRNV 328
               + E  G A +  + +YK+V +  D  G +    C IL++   K+WR V
Sbjct: 203 LQPPYNESYGFALSDVTGEYKIVHLFRDELGFVS---CEILSLR-KKAWREV 250


>ref|XP_006376129.1| hypothetical protein POPTR_0013s10060g [Populus trichocarpa]
           gi|550325399|gb|ERP53926.1| hypothetical protein
           POPTR_0013s10060g [Populus trichocarpa]
          Length = 436

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
 Frame = +2

Query: 2   FLALRQGRIEMSRY--SCKFNIPFWATCNGLIVLVDRHNHKAIYITNPVTKQIFVIPLFT 175
           F+  ++G+I++ +Y  SC  NI   ATCNGLI+L D H  K + + NPVT+++  +PL T
Sbjct: 163 FMEFKEGKIKVGKYNVSCLGNIR--ATCNGLILL-DNHVKKGLIVMNPVTRKLITLPLGT 219

Query: 176 SHILFKELCGIAYAMASMQYKVV 244
                KE  G A    +  YK+V
Sbjct: 220 LCNYHKESYGFALNHVTGDYKLV 242


>ref|XP_006376127.1| hypothetical protein POPTR_0013s10060g [Populus trichocarpa]
           gi|550325397|gb|ERP53924.1| hypothetical protein
           POPTR_0013s10060g [Populus trichocarpa]
          Length = 396

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
 Frame = +2

Query: 2   FLALRQGRIEMSRY--SCKFNIPFWATCNGLIVLVDRHNHKAIYITNPVTKQIFVIPLFT 175
           F+  ++G+I++ +Y  SC  NI   ATCNGLI+L D H  K + + NPVT+++  +PL T
Sbjct: 123 FMEFKEGKIKVGKYNVSCLGNIR--ATCNGLILL-DNHVKKGLIVMNPVTRKLITLPLGT 179

Query: 176 SHILFKELCGIAYAMASMQYKVV 244
                KE  G A    +  YK+V
Sbjct: 180 LCNYHKESYGFALNHVTGDYKLV 202


>ref|XP_002327285.1| predicted protein [Populus trichocarpa]
           gi|566200413|ref|XP_006376128.1| hypothetical protein
           POPTR_0013s10060g [Populus trichocarpa]
           gi|550325398|gb|ERP53925.1| hypothetical protein
           POPTR_0013s10060g [Populus trichocarpa]
          Length = 426

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
 Frame = +2

Query: 2   FLALRQGRIEMSRY--SCKFNIPFWATCNGLIVLVDRHNHKAIYITNPVTKQIFVIPLFT 175
           F+  ++G+I++ +Y  SC  NI   ATCNGLI+L D H  K + + NPVT+++  +PL T
Sbjct: 153 FMEFKEGKIKVGKYNVSCLGNIR--ATCNGLILL-DNHVKKGLIVMNPVTRKLITLPLGT 209

Query: 176 SHILFKELCGIAYAMASMQYKVV 244
                KE  G A    +  YK+V
Sbjct: 210 LCNYHKESYGFALNHVTGDYKLV 232


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