BLASTX nr result

ID: Rehmannia26_contig00022035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00022035
         (1063 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                43   5e-08

>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 42.7 bits (99), Expect(2) = 5e-08
 Identities = 15/42 (35%), Positives = 30/42 (71%)
 Frame = +2

Query: 839 IRYKMHIQVMDDTGNAPLLLWDRDCEKLIGKPCEILRREYID 964
           +RY++ ++ +D  GNAP +LWD++C +L+G     LR++ ++
Sbjct: 343 LRYRVKVRAVDLDGNAPFILWDKECTELLGISATDLRQKILE 384



 Score = 42.0 bits (97), Expect(2) = 5e-08
 Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
 Frame = +3

Query: 408 PTCSISHVIVPSTKTVSEELESGKSLVRTIEQLYSKREVTNSYNCKLNINYNN*VFIMDN 587
           P  SI  +   S  +  E+  SG+  V TI ++Y K+E                      
Sbjct: 252 PMRSIVSMSNMSYGSAFEDFSSGQMNVFTISEIYQKKEY--------------------- 290

Query: 588 N*VDLMQVGSFWVCATIISFIG--DWWYLSCPH--CTKKVTDAGELLYCYGCDKFPETGI 755
                   G FWV A I+      DW+Y+SC    C KK+T    L  C  C +  + GI
Sbjct: 291 --------GDFWVAAKIVGIESSWDWFYVSCKSHGCNKKLTLRNTLYDCDKCKRTWQEGI 342

Query: 756 MR 761
           +R
Sbjct: 343 LR 344


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