BLASTX nr result
ID: Rehmannia26_contig00020967
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00020967
(1110 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006358877.1| PREDICTED: replication factor C subunit 2-li... 575 e-161
ref|XP_004245638.1| PREDICTED: replication factor C subunit 2-li... 575 e-161
ref|XP_002304476.1| replication factor C 40 kDa family protein [... 569 e-160
gb|EMJ01585.1| hypothetical protein PRUPE_ppa008426mg [Prunus pe... 568 e-159
ref|XP_002509739.1| replication factor C / DNA polymerase III ga... 567 e-159
ref|XP_004298747.1| PREDICTED: replication factor C subunit 2-li... 566 e-159
gb|EOY24642.1| Replication factor C 2 isoform 1 [Theobroma cacao... 565 e-159
ref|XP_004515806.1| PREDICTED: replication factor C subunit 2-li... 565 e-158
ref|XP_006391776.1| hypothetical protein EUTSA_v10023584mg [Eutr... 565 e-158
gb|EXC34102.1| Replication factor C subunit 2 [Morus notabilis] 563 e-158
ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-li... 562 e-157
ref|XP_006302449.1| hypothetical protein CARUB_v10020535mg, part... 561 e-157
gb|AFK40126.1| unknown [Medicago truncatula] 561 e-157
ref|XP_002886430.1| hypothetical protein ARALYDRAFT_475032 [Arab... 560 e-157
ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [V... 559 e-157
ref|NP_176504.1| replication factor C 2 [Arabidopsis thaliana] g... 557 e-156
gb|EOY24643.1| Replication factor C / DNA polymerase III gamma-t... 556 e-156
gb|ESW27549.1| hypothetical protein PHAVU_003G211700g [Phaseolus... 555 e-156
dbj|BAB69675.1| replication factor C 40kDa subunit [Oryza sativa... 555 e-155
ref|XP_003580347.1| PREDICTED: replication factor C subunit 2-li... 554 e-155
>ref|XP_006358877.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
Length = 331
Score = 575 bits (1481), Expect = e-161
Identities = 289/317 (91%), Positives = 298/317 (94%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEK+RPTKV+DIVGNEDAV+RLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN
Sbjct: 15 WVEKFRPTKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 74
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
Y+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT
Sbjct: 75 YKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 134
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSNSTRF LACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM VVAAE+V YVPEG
Sbjct: 135 MEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMAVVAAEKVAYVPEG 194
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQ LNNLQAT+SGFGFVNQENVFKVCDQPHPLHVKNMVR V+EGKFDD
Sbjct: 195 LEAIIFTADGDMRQGLNNLQATHSGFGFVNQENVFKVCDQPHPLHVKNMVRNVLEGKFDD 254
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
ACAGLK LYDLGYSPTDIITTLFRIIKNYDM EY+KLEF+KETGFAHMRICDGVGSY
Sbjct: 255 ACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGFAHMRICDGVGSYLQM 314
Query: 901 XXXXXXXXXVRETAKAA 951
VRETAKAA
Sbjct: 315 CGLLAKLSLVRETAKAA 331
>ref|XP_004245638.1| PREDICTED: replication factor C subunit 2-like [Solanum
lycopersicum]
Length = 331
Score = 575 bits (1481), Expect = e-161
Identities = 289/317 (91%), Positives = 298/317 (94%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEK+RPTKV+DIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN
Sbjct: 15 WVEKFRPTKVSDIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 74
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
Y+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT
Sbjct: 75 YKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 134
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSNSTRF LACNTSSKIIEPIQSRCALVRFARLSDQEILGRLM VVAAE+V YVPEG
Sbjct: 135 MEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMAVVAAEKVAYVPEG 194
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQ LNNLQAT+SGFGFVNQENVFKVCDQPHPLHVKNMVR V+EGKFDD
Sbjct: 195 LEAIIFTADGDMRQGLNNLQATHSGFGFVNQENVFKVCDQPHPLHVKNMVRNVLEGKFDD 254
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
ACAGLK LYDLGYSPTDIITTLFRIIKNYDM EY+KLEF+KETGFAHMRICDGVGSY
Sbjct: 255 ACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGFAHMRICDGVGSYLQM 314
Query: 901 XXXXXXXXXVRETAKAA 951
VRETAKA+
Sbjct: 315 CGLLAKLSLVRETAKAS 331
>ref|XP_002304476.1| replication factor C 40 kDa family protein [Populus trichocarpa]
gi|222841908|gb|EEE79455.1| replication factor C 40 kDa
family protein [Populus trichocarpa]
Length = 330
Score = 569 bits (1467), Expect = e-160
Identities = 284/317 (89%), Positives = 298/317 (94%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRP KVADIVGN+DAV+RLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN
Sbjct: 14 WVEKYRPNKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 73
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HKI+ILDEADSMTSGAQQALRRT
Sbjct: 74 SKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIVILDEADSMTSGAQQALRRT 133
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSNSTRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLMVVV AEQVPYVPEG
Sbjct: 134 MEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVGAEQVPYVPEG 193
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQAT+SGF FVNQENVFKVCDQPHPLHVKNMVRQV+EGKFDD
Sbjct: 194 LEAIIFTADGDMRQALNNLQATHSGFHFVNQENVFKVCDQPHPLHVKNMVRQVLEGKFDD 253
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC+GLK LYD+GYSPTDIITTLFRIIKNYDM EY+KLEFMKETGFAHMRICDGVGSY
Sbjct: 254 ACSGLKHLYDMGYSPTDIITTLFRIIKNYDMAEYMKLEFMKETGFAHMRICDGVGSYLQL 313
Query: 901 XXXXXXXXXVRETAKAA 951
VR+TA+AA
Sbjct: 314 CGLLAKLALVRDTARAA 330
>gb|EMJ01585.1| hypothetical protein PRUPE_ppa008426mg [Prunus persica]
Length = 332
Score = 568 bits (1464), Expect = e-159
Identities = 283/316 (89%), Positives = 295/316 (93%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRP+ VADIVGNEDAV+RLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN
Sbjct: 16 WVEKYRPSNVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 75
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
Y+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQALRRT
Sbjct: 76 YKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRRT 135
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSNSTRF LACN SSKIIEPIQSRCALVRF+RLSDQEILGRLM+VV AE+VPYVPEG
Sbjct: 136 MEIYSNSTRFALACNVSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVQAEKVPYVPEG 195
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQATNSGF FVNQENVFKVCDQPHPLHVKNMV V+EGKFDD
Sbjct: 196 LEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVKNMVCNVLEGKFDD 255
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC+GLK+LYDLGYSPTDIITT FRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 256 ACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQL 315
Query: 901 XXXXXXXXXVRETAKA 948
+RETAKA
Sbjct: 316 CGLLAKLSLIRETAKA 331
>ref|XP_002509739.1| replication factor C / DNA polymerase III gamma-tau subunit,
putative [Ricinus communis] gi|223549638|gb|EEF51126.1|
replication factor C / DNA polymerase III gamma-tau
subunit, putative [Ricinus communis]
Length = 333
Score = 567 bits (1461), Expect = e-159
Identities = 281/317 (88%), Positives = 298/317 (94%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRP+K+ DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELLGPN
Sbjct: 17 WVEKYRPSKICDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPN 76
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
Y+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQALRRT
Sbjct: 77 YKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRRT 136
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQEILGRL++VV AE+VPYVPEG
Sbjct: 137 MEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLIIVVQAEKVPYVPEG 196
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+EGK+DD
Sbjct: 197 LEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRHVMEGKYDD 256
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 257 ACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQL 316
Query: 901 XXXXXXXXXVRETAKAA 951
VR+TA+AA
Sbjct: 317 CGLLAKLALVRDTARAA 333
>ref|XP_004298747.1| PREDICTED: replication factor C subunit 2-like [Fragaria vesca
subsp. vesca]
Length = 329
Score = 567 bits (1460), Expect = e-159
Identities = 281/316 (88%), Positives = 295/316 (93%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRPTKV+DIVGNEDAV+RLQVIARDGNMPNLILAGPPG GKTTSILALAHELLGPN
Sbjct: 13 WVEKYRPTKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGIGKTTSILALAHELLGPN 72
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
YRE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQALRRT
Sbjct: 73 YREGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQALRRT 132
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RL+DQEILGRLM+VV AE+VPYVPEG
Sbjct: 133 MEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLTDQEILGRLMIVVQAEKVPYVPEG 192
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQATNSGF FVNQENVFKVCDQPHPLHVKNMV ++EGKFDD
Sbjct: 193 LEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVKNMVHNILEGKFDD 252
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC+GLK+LYD+GYSPTDIITT FRIIKNYDM E+LKLEFMKETGFAHMRICDGVGSY
Sbjct: 253 ACSGLKQLYDMGYSPTDIITTFFRIIKNYDMAEFLKLEFMKETGFAHMRICDGVGSYLQL 312
Query: 901 XXXXXXXXXVRETAKA 948
VR+TAKA
Sbjct: 313 CGLLAKLSLVRDTAKA 328
>gb|EOY24642.1| Replication factor C 2 isoform 1 [Theobroma cacao]
gi|508777388|gb|EOY24644.1| Replication factor C 2
isoform 1 [Theobroma cacao]
Length = 332
Score = 565 bits (1457), Expect = e-159
Identities = 285/317 (89%), Positives = 295/317 (93%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRP KV+DIVGNEDAV+RLQVIA DGNMPNLIL+GPPGTGKTTSILALAHELLG N
Sbjct: 16 WVEKYRPNKVSDIVGNEDAVSRLQVIAHDGNMPNLILSGPPGTGKTTSILALAHELLGTN 75
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
Y+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQALRRT
Sbjct: 76 YKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQALRRT 135
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQEILGRLMVVV AE+VPYVPEG
Sbjct: 136 MEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVDAEKVPYVPEG 195
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+EG+FDD
Sbjct: 196 LEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRYVLEGRFDD 255
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 256 ACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQL 315
Query: 901 XXXXXXXXXVRETAKAA 951
VRETAKAA
Sbjct: 316 CGLLAKFSLVRETAKAA 332
>ref|XP_004515806.1| PREDICTED: replication factor C subunit 2-like [Cicer arietinum]
Length = 332
Score = 565 bits (1456), Expect = e-158
Identities = 284/317 (89%), Positives = 295/317 (93%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPN+IL+GP GTGKTTSILALAHELLGPN
Sbjct: 16 WVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNIILSGPSGTGKTTSILALAHELLGPN 75
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQALRRT
Sbjct: 76 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQALRRT 135
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSNSTRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLMVVV AE+VPYVPEG
Sbjct: 136 MEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKVPYVPEG 195
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQAT SGF FVNQ NVFKVCDQPHPLHVKNMVR VIEG FD+
Sbjct: 196 LEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIEGNFDE 255
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 256 ACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQM 315
Query: 901 XXXXXXXXXVRETAKAA 951
VRETAKAA
Sbjct: 316 CGLLAKLSLVRETAKAA 332
>ref|XP_006391776.1| hypothetical protein EUTSA_v10023584mg [Eutrema salsugineum]
gi|557088282|gb|ESQ29062.1| hypothetical protein
EUTSA_v10023584mg [Eutrema salsugineum]
Length = 333
Score = 565 bits (1455), Expect = e-158
Identities = 282/317 (88%), Positives = 295/317 (93%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN
Sbjct: 17 WVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 76
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
Y+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQALRRT
Sbjct: 77 YKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRRT 136
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
+EIYSNSTRF LACNTS+KIIEPIQSRCALVRF+RLSDQEILGRLMVVV AE VP++PEG
Sbjct: 137 IEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQEILGRLMVVVQAENVPFIPEG 196
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+E KFDD
Sbjct: 197 LEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLESKFDD 256
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC G+K+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 257 ACHGMKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQL 316
Query: 901 XXXXXXXXXVRETAKAA 951
VRETAKAA
Sbjct: 317 CGLLAKLAVVRETAKAA 333
>gb|EXC34102.1| Replication factor C subunit 2 [Morus notabilis]
Length = 330
Score = 563 bits (1451), Expect = e-158
Identities = 283/316 (89%), Positives = 293/316 (92%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRPT V DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELLGPN
Sbjct: 14 WVEKYRPTNVIDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPN 73
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
YRE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQALRRT
Sbjct: 74 YREGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQALRRT 133
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQEIL RLMVVV AE+VPYVPEG
Sbjct: 134 MEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILVRLMVVVDAEKVPYVPEG 193
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQAT SGF F+NQENVFKVCDQPHPLHVKNMVR V+EGKFDD
Sbjct: 194 LEAIIFTADGDMRQALNNLQATYSGFRFLNQENVFKVCDQPHPLHVKNMVRHVLEGKFDD 253
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC+GLK+LYDLGYSPTDIITT FRIIKNYDM EYLKL+FMKETGFAHMRICDGVGSY
Sbjct: 254 ACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLQFMKETGFAHMRICDGVGSYLQL 313
Query: 901 XXXXXXXXXVRETAKA 948
VRETAKA
Sbjct: 314 CGLLAKLSLVRETAKA 329
>ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-like [Cucumis sativus]
gi|449494241|ref|XP_004159490.1| PREDICTED: replication
factor C subunit 2-like [Cucumis sativus]
Length = 331
Score = 562 bits (1448), Expect = e-157
Identities = 277/316 (87%), Positives = 295/316 (93%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRP KV DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELLGPN
Sbjct: 15 WVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPN 74
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
Y+E VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMT+GAQQALRRT
Sbjct: 75 YKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTTGAQQALRRT 134
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSN+TRF LACNTSSKIIEPIQSRCA+VRF+RL+DQEILGRLMVV+ AE+VPYVPEG
Sbjct: 135 MEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVIQAEKVPYVPEG 194
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQAT+SGF FVNQ+NVFKVCDQPHPLHVKN+VR V+EGKFDD
Sbjct: 195 LEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGKFDD 254
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC GL++LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 255 ACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQL 314
Query: 901 XXXXXXXXXVRETAKA 948
VRETAKA
Sbjct: 315 CGLLAKLSMVRETAKA 330
>ref|XP_006302449.1| hypothetical protein CARUB_v10020535mg, partial [Capsella rubella]
gi|482571159|gb|EOA35347.1| hypothetical protein
CARUB_v10020535mg, partial [Capsella rubella]
Length = 360
Score = 561 bits (1447), Expect = e-157
Identities = 281/317 (88%), Positives = 294/317 (92%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLG N
Sbjct: 44 WVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGKN 103
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
Y+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQALRRT
Sbjct: 104 YKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRRT 163
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
+EIYSNSTRF LACNTS+KIIEPIQSRCALVRF+RLSD++ILGRLMVVV AE VPYVPEG
Sbjct: 164 IEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDEQILGRLMVVVQAENVPYVPEG 223
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQATNSGF VNQENVFKVCDQPHPLHVKN+VR V+E KFDD
Sbjct: 224 LEAIIFTADGDMRQALNNLQATNSGFRLVNQENVFKVCDQPHPLHVKNIVRNVLESKFDD 283
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 284 ACHGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQL 343
Query: 901 XXXXXXXXXVRETAKAA 951
VRETAKAA
Sbjct: 344 CGLLAKLAIVRETAKAA 360
>gb|AFK40126.1| unknown [Medicago truncatula]
Length = 333
Score = 561 bits (1447), Expect = e-157
Identities = 281/317 (88%), Positives = 294/317 (92%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELLGPN
Sbjct: 17 WVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPN 76
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQALRRT
Sbjct: 77 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRRT 136
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSNSTRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLMVVV AE+VPYVPEG
Sbjct: 137 MEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKVPYVPEG 196
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQ LNNLQAT SGF FVNQ NVFKVCDQPHPLHVKNMVR VIEG FD+
Sbjct: 197 LEAIIFTADGDMRQGLNNLQATFSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIEGNFDE 256
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC+GLK+LYDLGYSPTDIITTLFRIIK+YDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 257 ACSGLKQLYDLGYSPTDIITTLFRIIKSYDMAEYLKLEFMKETGFAHMRICDGVGSYLQM 316
Query: 901 XXXXXXXXXVRETAKAA 951
VR+TA AA
Sbjct: 317 CGLLAKFALVRDTANAA 333
>ref|XP_002886430.1| hypothetical protein ARALYDRAFT_475032 [Arabidopsis lyrata subsp.
lyrata] gi|297332271|gb|EFH62689.1| hypothetical protein
ARALYDRAFT_475032 [Arabidopsis lyrata subsp. lyrata]
Length = 334
Score = 560 bits (1444), Expect = e-157
Identities = 280/316 (88%), Positives = 293/316 (92%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELLGPN
Sbjct: 18 WVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPN 77
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
Y+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQALRRT
Sbjct: 78 YKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRRT 137
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
+EIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQ+ILGRL+VVV AE VPYVPEG
Sbjct: 138 IEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQQILGRLLVVVEAENVPYVPEG 197
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKN+VR V+E KFDD
Sbjct: 198 LEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNIVRNVLESKFDD 257
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 258 ACHGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQL 317
Query: 901 XXXXXXXXXVRETAKA 948
RETAKA
Sbjct: 318 CGLLAKLSIARETAKA 333
>ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [Vitis vinifera]
gi|297742576|emb|CBI34725.3| unnamed protein product
[Vitis vinifera]
Length = 330
Score = 559 bits (1440), Expect = e-157
Identities = 281/316 (88%), Positives = 292/316 (92%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRPTKVADIVGNED V+RLQVIARDGNMPNLIL+GPPGTGKTTS+LALAHELLG N
Sbjct: 14 WVEKYRPTKVADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTGKTTSVLALAHELLGAN 73
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLP G HKI+ILDEADSMT+GAQQALRRT
Sbjct: 74 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGSHKIVILDEADSMTTGAQQALRRT 133
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSNSTRF LACN SSKIIEPIQSRCA+VRF+RLSDQEILGRLMVVV AE+VP+VPEG
Sbjct: 134 MEIYSNSTRFALACNISSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVEAEKVPFVPEG 193
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+EGKFDD
Sbjct: 194 LEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLEGKFDD 253
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 254 ACYGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQL 313
Query: 901 XXXXXXXXXVRETAKA 948
VRETAKA
Sbjct: 314 CGLLAKLAVVRETAKA 329
>ref|NP_176504.1| replication factor C 2 [Arabidopsis thaliana]
gi|75169912|sp|Q9CAM7.1|RFC2_ARATH RecName:
Full=Replication factor C subunit 2; Short=AtRFC2;
AltName: Full=Activator 1 subunit 2; AltName:
Full=Protein EMBRYO DEFECTIVE 2811
gi|12323266|gb|AAG51618.1|AC010795_22 replication
factor, putative; 74998-73295 [Arabidopsis thaliana]
gi|182623790|gb|ACB88833.1| At1g63160 [Arabidopsis
thaliana] gi|332195942|gb|AEE34063.1| replication factor
C 2 [Arabidopsis thaliana]
Length = 333
Score = 557 bits (1436), Expect = e-156
Identities = 279/316 (88%), Positives = 294/316 (93%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRP+KV DIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELLG N
Sbjct: 17 WVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGTN 76
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
Y+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQALRRT
Sbjct: 77 YKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQALRRT 136
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
+EIYSNSTRF LACNTS+KIIEPIQSRCALVRF+RLSDQ+ILGRL+VVVAAE+VPYVPEG
Sbjct: 137 IEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLLVVVAAEKVPYVPEG 196
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKN+VR V+E KFD
Sbjct: 197 LEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLHVKNIVRNVLESKFDI 256
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 257 ACDGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQL 316
Query: 901 XXXXXXXXXVRETAKA 948
VRETAKA
Sbjct: 317 CGLLAKLSIVRETAKA 332
>gb|EOY24643.1| Replication factor C / DNA polymerase III gamma-tau subunit isoform
2 [Theobroma cacao]
Length = 393
Score = 556 bits (1433), Expect = e-156
Identities = 277/297 (93%), Positives = 287/297 (96%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRP KV+DIVGNEDAV+RLQVIA DGNMPNLIL+GPPGTGKTTSILALAHELLG N
Sbjct: 16 WVEKYRPNKVSDIVGNEDAVSRLQVIAHDGNMPNLILSGPPGTGKTTSILALAHELLGTN 75
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
Y+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQALRRT
Sbjct: 76 YKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQALRRT 135
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSNSTRF LACNTSSKIIEPIQSRCALVRF+RLSDQEILGRLMVVV AE+VPYVPEG
Sbjct: 136 MEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVDAEKVPYVPEG 195
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMVR V+EG+FDD
Sbjct: 196 LEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRYVLEGRFDD 255
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSY 891
AC GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 256 ACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSY 312
>gb|ESW27549.1| hypothetical protein PHAVU_003G211700g [Phaseolus vulgaris]
Length = 330
Score = 555 bits (1431), Expect = e-156
Identities = 278/316 (87%), Positives = 291/316 (92%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRP KVADIVGNEDAV+RLQVIARDGNMPNLIL+GPPGTGKTTSILALAHELLGPN
Sbjct: 14 WVEKYRPNKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLGPN 73
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
+E VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMT+GAQQALRRT
Sbjct: 74 CKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTTGAQQALRRT 133
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSNSTRF LACNTS+KIIEPIQSRCA+VRF+RL DQEILGRLM+VV AE+VPYVPEG
Sbjct: 134 MEIYSNSTRFALACNTSAKIIEPIQSRCAIVRFSRLLDQEILGRLMIVVQAEKVPYVPEG 193
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQAT SGF FVNQ NVFKVCDQPHPLHVKNMVR VIEG FD+
Sbjct: 194 LEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIEGNFDE 253
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC+GLK+LYDLGYSPTDIITTLFRIIKNYDM EYLKLEFMKETGFAHMRICDGVGSY
Sbjct: 254 ACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQL 313
Query: 901 XXXXXXXXXVRETAKA 948
VRE AKA
Sbjct: 314 CGLLAKLSLVRENAKA 329
>dbj|BAB69675.1| replication factor C 40kDa subunit [Oryza sativa Japonica Group]
gi|116310007|emb|CAH67033.1| OSIGBa0139P06.6 [Oryza
sativa Indica Group] gi|218195393|gb|EEC77820.1|
hypothetical protein OsI_17026 [Oryza sativa Indica
Group]
Length = 335
Score = 555 bits (1430), Expect = e-155
Identities = 274/317 (86%), Positives = 296/317 (93%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRPT+VAD+VGN DAVARLQVIARDGNMPNLIL+GPPGTGKTTSIL+LAHELLGP+
Sbjct: 19 WVEKYRPTRVADVVGNSDAVARLQVIARDGNMPNLILSGPPGTGKTTSILSLAHELLGPS 78
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
YREAVLELNASDDRG+DVVRNKIKMFAQKKVTL PGRHKI+ILDEADSMTSGAQQALRRT
Sbjct: 79 YREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIVILDEADSMTSGAQQALRRT 138
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSN+TRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLM+VVAAE+VPYVPEG
Sbjct: 139 MEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVAAEKVPYVPEG 198
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMV+ V++GKFD+
Sbjct: 199 LEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPHPLHVKNMVKNVLDGKFDE 258
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC+ LK+LYDLGYSPTDIITTLFR+IKNYDM EYLKLE +KETGFAHMRICDGVGS+
Sbjct: 259 ACSALKQLYDLGYSPTDIITTLFRVIKNYDMAEYLKLELLKETGFAHMRICDGVGSFLQL 318
Query: 901 XXXXXXXXXVRETAKAA 951
VRETAKA+
Sbjct: 319 SGLLAKFALVRETAKAS 335
>ref|XP_003580347.1| PREDICTED: replication factor C subunit 2-like [Brachypodium
distachyon]
Length = 333
Score = 554 bits (1427), Expect = e-155
Identities = 271/316 (85%), Positives = 296/316 (93%)
Frame = +1
Query: 1 WVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPN 180
WVEKYRP++VAD+VGN DAV+RL+VIARDGNMPNLIL+GPPGTGKTTSILALAHE+LGP+
Sbjct: 18 WVEKYRPSRVADVVGNSDAVSRLEVIARDGNMPNLILSGPPGTGKTTSILALAHEMLGPS 77
Query: 181 YREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQALRRT 360
YRE VLELNASDDRG+DVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMT+GAQQALRRT
Sbjct: 78 YREGVLELNASDDRGLDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTTGAQQALRRT 137
Query: 361 MEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMVVVAAEQVPYVPEG 540
MEIYSN+TRF LACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLMVVVAAE+VPYVPEG
Sbjct: 138 MEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVAAEKVPYVPEG 197
Query: 541 LEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHPLHVKNMVRQVIEGKFDD 720
LEAIIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNMV+ V++GKFD+
Sbjct: 198 LEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPHPLHVKNMVKNVLDGKFDE 257
Query: 721 ACAGLKKLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFMKETGFAHMRICDGVGSYXXX 900
AC+GLK+LYDLGYSPTDIITTLFR++KNYDM EYLKLE +KETGFAHMRICDGVGS+
Sbjct: 258 ACSGLKQLYDLGYSPTDIITTLFRVVKNYDMAEYLKLELLKETGFAHMRICDGVGSFLQL 317
Query: 901 XXXXXXXXXVRETAKA 948
VRETAKA
Sbjct: 318 SGLLAKFAIVRETAKA 333