BLASTX nr result

ID: Rehmannia26_contig00020950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00020950
         (594 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006364738.1| PREDICTED: nucleolin-like [Solanum tuberosum]      58   2e-06
ref|XP_004249087.1| PREDICTED: uncharacterized protein LOC101252...    57   4e-06

>ref|XP_006364738.1| PREDICTED: nucleolin-like [Solanum tuberosum]
          Length = 1045

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
 Frame = +1

Query: 10   TGTNAQDLHFPIPGSKRPFSLVKYDPHYEEPQGLSRVRVEXXXXXXXXXXXXRGAGVLSL 189
            +G N Q   + + GSKRPFS V ++PH  +  G+SRV++E               G L  
Sbjct: 943  SGINHQ---YSLSGSKRPFSAVVHNPHRMDSSGVSRVQLESSFLTANRSMLPHSRGPLGT 999

Query: 190  P---YHPQQERGFTSESVIGRRSYPSHFQTREQAPYYRDNNIYR 312
            P   Y+ Q     +  SV G  S+P+ FQ+ ++ PY  + +IYR
Sbjct: 1000 PSFVYYGQLGSDHSPGSVYGVESFPNSFQSHDRDPYGGNRSIYR 1043


>ref|XP_004249087.1| PREDICTED: uncharacterized protein LOC101252732 [Solanum
            lycopersicum]
          Length = 1040

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
 Frame = +1

Query: 37   FPIPGSKRPFSLVKYDPHYEEPQGLSRVRVEXXXXXXXXXXXXRGAGVLSLP---YHPQQ 207
            + + GSKRPFS V ++PH  +  G+SRV +E               G L  P   Y+ Q 
Sbjct: 944  YSLSGSKRPFSAVVHNPHRMDSSGVSRVHLESSFPTANRSMLPHSRGPLGTPSFAYYGQL 1003

Query: 208  ERGFTSESVIGRRSYPSHFQTREQAPYYRDNNIYR 312
                +  SV G +S+P+ FQ+ +  PY  + +IYR
Sbjct: 1004 GSDHSPGSVYGVQSFPNSFQSHDHDPYGGNRSIYR 1038


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