BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00020718
         (664 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF97084.1| retrotransposon protein, putative, unclassified [...   171   1e-40
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...   171   1e-40
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...   164   2e-38
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...   164   2e-38
ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A...   162   6e-38
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   162   6e-38
ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756...   162   8e-38
emb|CAB75484.1| putative protein [Arabidopsis thaliana]               161   1e-37
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...   160   2e-37
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...   160   3e-37
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...   159   7e-37
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...   159   7e-37
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers...   159   9e-37
gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [...   158   2e-36
ref|XP_004297906.1| PREDICTED: putative ribonuclease H protein A...   157   2e-36
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja...   157   2e-36
gb|ABB46931.2| retrotransposon protein, putative, unclassified [...   157   2e-36
gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indi...   157   4e-36
ref|XP_004298552.1| PREDICTED: putative ribonuclease H protein A...   156   5e-36
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A...   156   5e-36

>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  171 bits (434), Expect = 1e-40
 Identities = 86/191 (45%), Positives = 121/191 (63%)
 Frame = +2

Query: 92   ANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSCRY 271
            A+   AD +  IL IY   SGQK++  KSSIFFSRNT    +A VC  ++ +T   + +Y
Sbjct: 509  ADKNNADHLKAILDIYCQNSGQKISEAKSSIFFSRNTAVEDKAAVCGSLDIMTEALNDKY 568

Query: 272  LGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKL 451
            LGLP MIG  K + F ++I+   N+I   K + LST GKEV+IK++  A+P++ MS+F++
Sbjct: 569  LGLPAMIGVDKSDCFRHLIDRVNNRINGRKEKMLSTGGKEVLIKSIAQAIPVFAMSVFRI 628

Query: 452  PAGTCKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQ 631
            P   C  +S   A FWWG  E N ++IHWK W  + + K+ GGL F+DL  FN AM+ KQ
Sbjct: 629  PKKICDCISEAIARFWWGDDE-NHRRIHWKAWWRMCIPKQRGGLGFRDLYCFNRAMLAKQ 687

Query: 632  LWRILSMPNLL 664
            +WR L  P+ L
Sbjct: 688  IWRFLCDPDSL 698


>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score =  171 bits (434), Expect = 1e-40
 Identities = 86/191 (45%), Positives = 121/191 (63%)
 Frame = +2

Query: 92   ANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSCRY 271
            A+   AD +  IL IY   SGQK++  KSSIFFSRNT    +A VC  ++ +T   + +Y
Sbjct: 509  ADKNNADHLKAILDIYCQNSGQKISEAKSSIFFSRNTAVEDKAAVCGSLDIMTEALNDKY 568

Query: 272  LGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKL 451
            LGLP MIG  K + F ++I+   N+I   K + LST GKEV+IK++  A+P++ MS+F++
Sbjct: 569  LGLPAMIGVDKSDCFRHLIDRVNNRINGRKEKMLSTGGKEVLIKSIAQAIPVFAMSVFRI 628

Query: 452  PAGTCKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQ 631
            P   C  +S   A FWWG  E N ++IHWK W  + + K+ GGL F+DL  FN AM+ KQ
Sbjct: 629  PKKICDCISEAIARFWWGDDE-NHRRIHWKAWWRMCIPKQRGGLGFRDLYCFNRAMLAKQ 687

Query: 632  LWRILSMPNLL 664
            +WR L  P+ L
Sbjct: 688  IWRFLCDPDSL 698


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Citrus sinensis]
          Length = 765

 Score =  164 bits (415), Expect = 2e-38
 Identities = 95/261 (36%), Positives = 129/261 (49%), Gaps = 40/261 (15%)
 Frame = +2

Query: 2   INGKLIAKVEEPEIRKALFDMHPNKAPGPD------------------------------ 91
           +N  L     E EI +AL  MHP KAPGPD                              
Sbjct: 35  MNSHLDQAFTEAEILEALSQMHPTKAPGPDGLPAVFFQKHWASVSEGVIATCLHILNDGD 94

Query: 92  -------ANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPP---LVQADVCQRMN 241
                  A  +   ++ ++   Y   SGQ  N  KSS+FFS N          D+ Q + 
Sbjct: 95  DSLVFTRATKEDCTNLKQLFDCYAAASGQIFNFEKSSMFFSENAKQGQITTIKDIFQ-LQ 153

Query: 242 GITNHQSCRYLGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSAL 421
            ++ H+  +YLGLP M+GR K   FN +     NKI +W+  F S+ GKE++IKAV  A+
Sbjct: 154 VVSRHE--KYLGLPSMVGRKKTSFFNEIKLRIINKISNWQANFFSSGGKEILIKAVAQAV 211

Query: 422 PIYVMSIFKLPAGTCKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQ 601
           P Y MS+FKLP G C+++    A FWWG  +   + IHW KW  L   K+ GGL F+DL 
Sbjct: 212 PAYAMSVFKLPLGLCEDMQKAIAGFWWG-KKREKRSIHWSKWERLCQAKKRGGLGFRDLS 270

Query: 602 LFNEAMMVKQLWRILSMPNLL 664
            FN+A++ KQ WRI+  P  L
Sbjct: 271 SFNQALVAKQSWRIIQAPESL 291


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 769

 Score =  164 bits (415), Expect = 2e-38
 Identities = 95/261 (36%), Positives = 129/261 (49%), Gaps = 40/261 (15%)
 Frame = +2

Query: 2   INGKLIAKVEEPEIRKALFDMHPNKAPGPD------------------------------ 91
           +N  L     E EI +AL  MHP KAPGPD                              
Sbjct: 35  MNSHLDQAFTEAEILEALSQMHPTKAPGPDGLPAVFFQKHWASVSEGVIATCLHILNDGD 94

Query: 92  -------ANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPP---LVQADVCQRMN 241
                  A  +   ++ ++   Y   SGQ  N  KSS+FFS N          D+ Q + 
Sbjct: 95  DSLVFTRATKEDCTNLKQLFDCYAAASGQIFNFEKSSMFFSENAKQGQITTIKDIFQ-LQ 153

Query: 242 GITNHQSCRYLGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSAL 421
            ++ H+  +YLGLP M+GR K   FN +     NKI +W+  F S+ GKE++IKAV  A+
Sbjct: 154 VVSRHE--KYLGLPSMVGRKKTSFFNEIKLRIINKISNWQANFFSSGGKEILIKAVAQAV 211

Query: 422 PIYVMSIFKLPAGTCKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQ 601
           P Y MS+FKLP G C+++    A FWWG  +   + IHW KW  L   K+ GGL F+DL 
Sbjct: 212 PAYAMSVFKLPLGLCEDMQKAIAGFWWG-KKREKRSIHWSKWERLCQAKKRGGLGFRDLS 270

Query: 602 LFNEAMMVKQLWRILSMPNLL 664
            FN+A++ KQ WRI+  P  L
Sbjct: 271 SFNQALVAKQSWRIIQAPESL 291


>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 786

 Score =  162 bits (411), Expect = 6e-38
 Identities = 80/183 (43%), Positives = 111/183 (60%)
 Frame = +2

Query: 116 VMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSCRYLGLPLMIG 295
           +MEI + Y   SGQ +N  KSS +FS NTP  +   + + M         +YLGLP + G
Sbjct: 138 LMEIFKEYCKASGQLINGEKSSAYFSPNTPDQMSRLLGELMGFAEVEDPGKYLGLPTLWG 197

Query: 296 RSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKLPAGTCKEL 475
           RSK E   Y+++  + K+  WK R LS AGKE++IK+V +A+P Y M+ FK P G C  +
Sbjct: 198 RSKKEAVGYIVDRVQRKLVGWKQRSLSWAGKEILIKSVATAIPAYPMACFKFPKGVCDTI 257

Query: 476 SMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQLWRILSMP 655
           +   ++FWWG S     +IHWK W LL   KEEGGL F+DL  FN +++ KQ WR++  P
Sbjct: 258 NSALSNFWWG-STSTGNRIHWKSWELLGKTKEEGGLGFRDLHQFNMSLLAKQCWRLVEEP 316

Query: 656 NLL 664
           N L
Sbjct: 317 NSL 319


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  162 bits (411), Expect = 6e-38
 Identities = 80/188 (42%), Positives = 116/188 (61%)
 Frame = +2

Query: 92   ANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSCRY 271
            A +Q  +++ ++L  Y + SGQ +N+ KSSIFFS NTPP +   +   M          Y
Sbjct: 1300 ATLQNCETLSDLLHTYCIASGQLINVEKSSIFFSPNTPPEIAHLLSSIMQIPVVSDPGTY 1359

Query: 272  LGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKL 451
            LGLP    RSK +   ++ ++   K+K WK   LS AGKEV+IKAV +A+P Y M  FK 
Sbjct: 1360 LGLPTFWHRSKKKALGFIKDSILRKVKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFKF 1419

Query: 452  PAGTCKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQ 631
            P+  CKEL+ + ADFWWG   ++T+ IHWK W  LA  K++GG+ F++L+ FN +++ KQ
Sbjct: 1420 PSTLCKELNGILADFWWG--NVDTRGIHWKSWDFLARPKKDGGMGFRNLEDFNNSLLAKQ 1477

Query: 632  LWRILSMP 655
             WR+   P
Sbjct: 1478 AWRLHQNP 1485


>ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756955 [Setaria italica]
          Length = 1203

 Score =  162 bits (410), Expect = 8e-38
 Identities = 73/191 (38%), Positives = 119/191 (62%)
 Frame = +2

Query: 92   ANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSCRY 271
            A+   AD +  IL  Y   SGQK++  KSSI+FS NT    + +VCQ +N +T   + +Y
Sbjct: 557  ADKNNADCLASILNRYCASSGQKISEAKSSIYFSANTEADQKTEVCQILNIMTESLNDKY 616

Query: 272  LGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKL 451
            LGLP ++G  +   F ++I+    +I  WK + LS  GKE++IK++  A+P+Y M +F++
Sbjct: 617  LGLPALVGLDRSNCFRHLIDRVNTRINGWKEKTLSLGGKEILIKSIAQAVPVYAMMVFQI 676

Query: 452  PAGTCKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQ 631
            P   CK ++   + +WWG  +   +++HW++W  + + K++GG+ F+DLQ FN AM+ KQ
Sbjct: 677  PKSICKGITNAISQYWWG-DDDEHRRMHWQEWWKMCLPKDKGGMGFRDLQSFNLAMLAKQ 735

Query: 632  LWRILSMPNLL 664
             WR+L  P  L
Sbjct: 736  AWRLLCEPESL 746


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score =  161 bits (408), Expect = 1e-37
 Identities = 79/191 (41%), Positives = 111/191 (58%)
 Frame = +2

Query: 92  ANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSCRY 271
           ANV+   ++ ++  +Y  +SGQK+N+ KS I F        Q  +   +N        +Y
Sbjct: 312 ANVRNCQALKDVFDVYEYYSGQKINVQKSLITFGSRVYGSTQTRLKTLLNIPNQGGGGKY 371

Query: 272 LGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKL 451
           LGLP   GR K E FNY+I+  K +  SW  +FLS AGKE+++K+V  A+P+Y MS FKL
Sbjct: 372 LGLPEQFGRKKKEMFNYIIDRVKERTASWSAKFLSPAGKEILLKSVALAMPVYAMSCFKL 431

Query: 452 PAGTCKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQ 631
           P G   E+  L  +FWW  +  N + I W  W  L   K+EGGL F+DL  FN+A++ KQ
Sbjct: 432 PQGIVSEIESLLMNFWWEKAS-NKRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQ 490

Query: 632 LWRILSMPNLL 664
            WRI+  PN L
Sbjct: 491 AWRIIQYPNSL 501


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score =  160 bits (406), Expect = 2e-37
 Identities = 78/191 (40%), Positives = 111/191 (58%)
 Frame = +2

Query: 92   ANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSCRY 271
            ANV+   ++ ++  +Y  +SGQK+N+ KS I F        Q+ + Q +         +Y
Sbjct: 847  ANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSKLKQILEIPNQGGGGKY 906

Query: 272  LGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKL 451
            LGLP   GR K E F Y+I+  K +  +W  RFLS AGKE+M+K+V  A+P+Y MS FKL
Sbjct: 907  LGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCFKL 966

Query: 452  PAGTCKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQ 631
            P G   E+  L  +FWW  +  N + I W  W  L   K+EGGL F+DL  FN+A++ KQ
Sbjct: 967  PKGIVSEIESLLMNFWWEKAS-NQRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQ 1025

Query: 632  LWRILSMPNLL 664
             WR++  PN L
Sbjct: 1026 AWRLIQYPNSL 1036


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score =  160 bits (405), Expect = 3e-37
 Identities = 78/191 (40%), Positives = 111/191 (58%)
 Frame = +2

Query: 92   ANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSCRY 271
            ANV+   ++ ++  +Y  +SGQK+N+ KS I F        Q+ + Q +         +Y
Sbjct: 1073 ANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSRLKQILEIPNQGGGGKY 1132

Query: 272  LGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKL 451
            LGLP   GR K E F Y+I+  K +  +W  RFLS AGKE+M+K+V  A+P+Y MS FKL
Sbjct: 1133 LGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCFKL 1192

Query: 452  PAGTCKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQ 631
            P G   E+  L  +FWW  +  N + I W  W  L   K+EGGL F+DL  FN+A++ KQ
Sbjct: 1193 PKGIVSEIESLLMNFWWEKAS-NQRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQ 1251

Query: 632  LWRILSMPNLL 664
             WR++  PN L
Sbjct: 1252 AWRLIQYPNSL 1262


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score =  159 bits (402), Expect = 7e-37
 Identities = 80/194 (41%), Positives = 117/194 (60%), Gaps = 3/194 (1%)
 Frame = +2

Query: 92   ANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSC-R 268
            +NV+   ++ ++  +Y  +SGQK+N+ KS I F        Q  + + + GI +H    +
Sbjct: 1073 SNVRNCQALKDVFDVYEYYSGQKINMSKSMITFGSRVHGTTQNRL-KNILGIQSHGGGGK 1131

Query: 269  YLGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFK 448
            YLGLP   GR K + FNY+IE  K +  SW  ++LS AGKE+M+K+V  ++P+Y MS FK
Sbjct: 1132 YLGLPEQFGRKKRDMFNYIIERVKKRTSSWSAKYLSPAGKEIMLKSVAMSMPVYAMSCFK 1191

Query: 449  LPAGTCKELSMLFADFWWGLSELNTKK--IHWKKWSLLAVDKEEGGLEFKDLQLFNEAMM 622
            LP     E+  L  +FWW   E N KK  I W  W  L   K+EGGL F+DL  FN+A++
Sbjct: 1192 LPLNIVSEIEALLMNFWW---EKNAKKREIPWIAWKRLQYSKKEGGLGFRDLAKFNDALL 1248

Query: 623  VKQLWRILSMPNLL 664
             KQ+WR+++ PN L
Sbjct: 1249 AKQVWRMINNPNSL 1262


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
            putative protein [Arabidopsis thaliana]
          Length = 1294

 Score =  159 bits (402), Expect = 7e-37
 Identities = 80/194 (41%), Positives = 117/194 (60%), Gaps = 3/194 (1%)
 Frame = +2

Query: 92   ANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSC-R 268
            +NV+   ++ ++  +Y  +SGQK+N+ KS I F        Q  + + + GI +H    +
Sbjct: 1053 SNVRNCQALKDVFDVYEYYSGQKINMSKSMITFGSRVHGTTQNRL-KNILGIQSHGGGGK 1111

Query: 269  YLGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFK 448
            YLGLP   GR K + FNY+IE  K +  SW  ++LS AGKE+M+K+V  ++P+Y MS FK
Sbjct: 1112 YLGLPEQFGRKKRDMFNYIIERVKKRTSSWSAKYLSPAGKEIMLKSVAMSMPVYAMSCFK 1171

Query: 449  LPAGTCKELSMLFADFWWGLSELNTKK--IHWKKWSLLAVDKEEGGLEFKDLQLFNEAMM 622
            LP     E+  L  +FWW   E N KK  I W  W  L   K+EGGL F+DL  FN+A++
Sbjct: 1172 LPLNIVSEIEALLMNFWW---EKNAKKREIPWIAWKRLQYSKKEGGLGFRDLAKFNDALL 1228

Query: 623  VKQLWRILSMPNLL 664
             KQ+WR+++ PN L
Sbjct: 1229 AKQVWRMINNPNSL 1242


>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  159 bits (401), Expect = 9e-37
 Identities = 78/191 (40%), Positives = 112/191 (58%)
 Frame = +2

Query: 92   ANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSCRY 271
            AN  +   +  IL  Y   +GQ +NL KSSI F      + +A++   +       +  Y
Sbjct: 539  ANKDEVVVLQSILGAYGAATGQIINLAKSSITFGSKVETVKKAEIQTCLGIFKEGDASTY 598

Query: 272  LGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKL 451
            LGLP     SKIE  +Y+    K+K+ SW ++ LS  GKE+M+KAV  A+P++ MS FKL
Sbjct: 599  LGLPECFSGSKIEMLDYIKVRLKSKLSSWFSKSLSQGGKEIMLKAVAMAMPVFAMSCFKL 658

Query: 452  PAGTCKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQ 631
            P  TC  L+   ADFWW  ++ + +KIHW  W  L + KE GGL F+D+ LFN+A++ KQ
Sbjct: 659  PKTTCTNLASAMADFWWSAND-HQRKIHWLSWEKLCLPKEHGGLGFRDIGLFNQALLAKQ 717

Query: 632  LWRILSMPNLL 664
             WR+L  P+ L
Sbjct: 718  AWRLLQFPDCL 728


>gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
          Length = 920

 Score =  158 bits (399), Expect = 2e-36
 Identities = 83/189 (43%), Positives = 108/189 (57%)
 Frame = +2

Query: 92  ANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSCRY 271
           A+V      M +L  Y   SGQ VN  KS ++FS NTP  ++  +   +          Y
Sbjct: 272 ADVTNCRRFMHLLNRYCAASGQLVNHEKSCLYFSSNTPAELKTTIGSILAVEGTDNPGNY 331

Query: 272 LGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKL 451
           LG+P M GRSK    NYV E  K+KI  WK   LS AGKEV+IKA+ +A+P + M  FK 
Sbjct: 332 LGMPTMWGRSKKAAMNYVKERVKDKILGWKQSSLSLAGKEVLIKAIATAIPTFPMQCFKF 391

Query: 452 PAGTCKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQ 631
             G C E++   A FWWG    +T KIHWK WS L + K +GGL F+DL  FN A++ KQ
Sbjct: 392 TKGLCDEINSEMAKFWWGKPNSDT-KIHWKSWSALCLPKSDGGLGFRDLNTFNLALLGKQ 450

Query: 632 LWRILSMPN 658
            WR++  PN
Sbjct: 451 AWRLIHEPN 459


>ref|XP_004297906.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 341

 Score =  157 bits (398), Expect = 2e-36
 Identities = 77/177 (43%), Positives = 110/177 (62%)
 Frame = +2

Query: 134 IYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSCRYLGLPLMIGRSKIET 313
           +Y   SGQ+VN  KSS+ FSRN P  ++  +   +     H+  +YLGLP  +G+SK++ 
Sbjct: 1   MYERASGQQVNYSKSSVVFSRNLPDELKQILALELRVTKVHEHDKYLGLPFRVGKSKMDK 60

Query: 314 FNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKLPAGTCKELSMLFAD 493
           F+Y+ E   NK+ +WK++ LS AGK V+IK V   +P Y M+ + LP   C  +  L A 
Sbjct: 61  FSYLQEKVTNKLVNWKSQILSCAGKTVLIKVVAQTMPTYAMNCYLLPKILCDNIHKLCAS 120

Query: 494 FWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQLWRILSMPNLL 664
           F+WG SE   KKIHW+ W  L + KEEGG+ FK+L  +N A++ KQ WR +S PN L
Sbjct: 121 FFWGDSE-TKKKIHWQSWVKLCLTKEEGGMGFKNLYAYNLALLAKQGWRFMSQPNSL 176


>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1888

 Score =  157 bits (398), Expect = 2e-36
 Identities = 78/187 (41%), Positives = 113/187 (60%)
 Frame = +2

Query: 104  QADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSCRYLGLP 283
            QA  + E+L  Y   +GQ +N  K SI F +++P  VQ  + Q +  I+N    +YLG P
Sbjct: 1266 QAVVMKEVLETYASCTGQLINPSKCSIMFGQSSPTAVQNQIKQTLQ-ISNSFEDKYLGFP 1324

Query: 284  LMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKLPAGT 463
               GR     F  + E    +I  W  +FLST GKE++IKAVL A+P+YVM +FKLP   
Sbjct: 1325 TPEGRMTKGKFQSLQERLWKRIMLWGEKFLSTGGKEILIKAVLQAMPVYVMGLFKLPESV 1384

Query: 464  CKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQLWRI 643
            C+EL+ L  +FWWG +E   ++ HWK W  L   K +GG+ F+D +LFN+A++ +Q WR+
Sbjct: 1385 CEELTKLVRNFWWG-AEKGMRRTHWKSWDCLIAQKLKGGMGFRDFRLFNQALLARQAWRL 1443

Query: 644  LSMPNLL 664
            L  P+ L
Sbjct: 1444 LDRPDSL 1450


>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1853

 Score =  157 bits (398), Expect = 2e-36
 Identities = 78/187 (41%), Positives = 113/187 (60%)
 Frame = +2

Query: 104  QADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSCRYLGLP 283
            QA  + E+L  Y   +GQ +N  K SI F +++P  VQ  + Q +  I+N    +YLG P
Sbjct: 1231 QAVVMKEVLETYASCTGQLINPSKCSIMFGQSSPTAVQNQIKQTLQ-ISNSFEDKYLGFP 1289

Query: 284  LMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKLPAGT 463
               GR     F  + E    +I  W  +FLST GKE++IKAVL A+P+YVM +FKLP   
Sbjct: 1290 TPEGRMTKGKFQSLQERLWKRIMLWGEKFLSTGGKEILIKAVLQAMPVYVMGLFKLPESV 1349

Query: 464  CKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQLWRI 643
            C+EL+ L  +FWWG +E   ++ HWK W  L   K +GG+ F+D +LFN+A++ +Q WR+
Sbjct: 1350 CEELTKLVRNFWWG-AEKGMRRTHWKSWDCLIAQKLKGGMGFRDFRLFNQALLARQAWRL 1408

Query: 644  LSMPNLL 664
            L  P+ L
Sbjct: 1409 LDRPDSL 1415


>gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indica Group]
          Length = 1860

 Score =  157 bits (396), Expect = 4e-36
 Identities = 74/186 (39%), Positives = 112/186 (60%)
 Frame = +2

Query: 92   ANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMNGITNHQSCRY 271
            +++     + + L+ Y   SGQK+NL KSSIFF +N P  ++  V + +          Y
Sbjct: 1465 SDLHSVQGLKDALQAYCKASGQKINLQKSSIFFGQNCPEDIKNSVKETLQVSVEILQDTY 1524

Query: 272  LGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKL 451
            LG+P  IGR+   +F+++ E    ++ SW +R +S AGKE M+KAV  A+P YVMS FKL
Sbjct: 1525 LGMPTEIGRASTGSFHFLPERVWRRVNSWNDRPMSRAGKETMLKAVAQAIPTYVMSCFKL 1584

Query: 452  PAGTCKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQ 631
            P  TC+++     D WWG  +   KK+HW+ W  +   K  GG+ F+DL LFN+AM+ +Q
Sbjct: 1585 PVSTCEKMKSCILDHWWGFED-GKKKMHWRSWEWMTTPKSLGGMGFRDLGLFNQAMLARQ 1643

Query: 632  LWRILS 649
             WRI++
Sbjct: 1644 GWRIVT 1649


>ref|XP_004298552.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 322

 Score =  156 bits (395), Expect = 5e-36
 Identities = 80/189 (42%), Positives = 118/189 (62%), Gaps = 3/189 (1%)
 Frame = +2

Query: 89  DANVQQADSVMEILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQR---MNGITNHQ 259
           DA+VQ    + EI  +Y   SGQK+++ KS++ FS  T  +V+ + C     M  +  H+
Sbjct: 74  DASVQDCLKLKEIFAVYERVSGQKISVEKSTVSFSPRTTRVVK-EACSTALDMKIVPCHE 132

Query: 260 SCRYLGLPLMIGRSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMS 439
             RYLGLP++ GR+K + F  V +    KI+ W+ + LS  GKEV+IKAV  ++P Y MS
Sbjct: 133 --RYLGLPIVTGRNKKKVFKGVADRVWQKIQGWEGKLLSKGGKEVLIKAVAQSIPTYTMS 190

Query: 440 IFKLPAGTCKELSMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAM 619
           +F+LPAG CKE++   A +WWG      K IHW++W  L V K EGGL F++ Q FN+A+
Sbjct: 191 VFQLPAGICKEINKHLARYWWG--NFGGKGIHWRRWDALCVPKGEGGLGFREFQCFNQAL 248

Query: 620 MVKQLWRIL 646
           + K  WR++
Sbjct: 249 VGKIGWRLI 257


>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 1152

 Score =  156 bits (395), Expect = 5e-36
 Identities = 78/183 (42%), Positives = 113/183 (61%), Gaps = 2/183 (1%)
 Frame = +2

Query: 122 EILRIYNLFSGQKVNLGKSSIFFSRNTPPLVQADVCQRMN--GITNHQSCRYLGLPLMIG 295
           +I   Y   SGQ++N  KSS+ FSRN P   Q D+   +    + NH+  +YLGLP  + 
Sbjct: 459 DIFVTYETMSGQQINYEKSSVSFSRNVPLWKQHDLAAVLGVQRVENHE--KYLGLPTELS 516

Query: 296 RSKIETFNYVIEAAKNKIKSWKNRFLSTAGKEVMIKAVLSALPIYVMSIFKLPAGTCKEL 475
            SK E F Y+I+  + + + W+++ LS  GKEV++KAV+ ++P YVMS F+LP   C E+
Sbjct: 517 YSKDEAFRYLIDRVRKRTQGWRDKTLSGVGKEVLLKAVIQSIPTYVMSCFELPRHLCNEM 576

Query: 476 SMLFADFWWGLSELNTKKIHWKKWSLLAVDKEEGGLEFKDLQLFNEAMMVKQLWRILSMP 655
             L A FWWG    + +KIHW  W  L   K+EGGL F+D+ +FN+A++ KQ WR+L  P
Sbjct: 577 HQLMARFWWG-EFGDERKIHWIAWDKLCSSKKEGGLGFRDMHVFNKALLAKQGWRMLCRP 635

Query: 656 NLL 664
             L
Sbjct: 636 QSL 638