BLASTX nr result

ID: Rehmannia26_contig00020654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00020654
         (440 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS67294.1| hypothetical protein M569_07483, partial [Genlise...   145   5e-33
dbj|BAJ95947.1| predicted protein [Hordeum vulgare subsp. vulgare]    144   9e-33
emb|CBI32365.3| unnamed protein product [Vitis vinifera]              144   2e-32
ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein S...   144   2e-32
ref|XP_006857628.1| hypothetical protein AMTR_s00061p00127560 [A...   142   4e-32
ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putat...   142   4e-32
gb|EXB29439.1| hypothetical protein L484_022110 [Morus notabilis]     142   5e-32
ref|XP_003575247.1| PREDICTED: small nuclear ribonucleoprotein S...   142   5e-32
ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein S...   142   5e-32
emb|CBI39815.3| unnamed protein product [Vitis vinifera]              142   5e-32
ref|XP_002306766.1| small nuclear ribonucleoprotein D1 [Populus ...   141   8e-32
gb|EOX94808.1| Small nuclear ribonucleoprotein family protein, p...   141   1e-31
ref|XP_006444105.1| hypothetical protein CICLE_v10022934mg [Citr...   140   2e-31
ref|XP_004952927.1| PREDICTED: small nuclear ribonucleoprotein S...   140   2e-31
ref|XP_004242330.1| PREDICTED: small nuclear ribonucleoprotein S...   140   2e-31
ref|XP_002454085.1| hypothetical protein SORBIDRAFT_04g024330 [S...   140   2e-31
gb|AGV54824.1| small nuclear ribonucleoprotein Sm D1 [Phaseolus ...   140   2e-31
ref|XP_004150106.1| PREDICTED: small nuclear ribonucleoprotein S...   140   2e-31
tpg|DAA37374.1| TPA: hypothetical protein ZEAMMB73_218857 [Zea m...   140   2e-31
gb|AFW58548.1| hypothetical protein ZEAMMB73_336389 [Zea mays]        140   2e-31

>gb|EPS67294.1| hypothetical protein M569_07483, partial [Genlisea aurea]
          Length = 116

 Score =  145 bits (366), Expect = 5e-33
 Identities = 71/74 (95%), Positives = 72/74 (97%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTIIGVDVSMNTHLKTVKLT KGKNPITLDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 27  VHGTIIGVDVSMNTHLKTVKLTLKGKNPITLDHLSVRGNNIRYYILPDSLNLETLLVEET 86

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPTAGRP+
Sbjct: 87  PRVKPKKPTAGRPL 100


>dbj|BAJ95947.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 114

 Score =  144 bits (364), Expect = 9e-33
 Identities = 69/74 (93%), Positives = 72/74 (97%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTIIGVD+SMNTHLKTVKLT KGKNP+TLDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 25  VHGTIIGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEET 84

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPTAG+PM
Sbjct: 85  PRVKPKKPTAGKPM 98


>emb|CBI32365.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  144 bits (362), Expect = 2e-32
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+TLDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 55  VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEET 114

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPTAGRPM
Sbjct: 115 PRVKPKKPTAGRPM 128


>ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Vitis vinifera] gi|225436988|ref|XP_002277231.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           isoform 2 [Vitis vinifera]
          Length = 114

 Score =  144 bits (362), Expect = 2e-32
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+TLDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 25  VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEET 84

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPTAGRPM
Sbjct: 85  PRVKPKKPTAGRPM 98


>ref|XP_006857628.1| hypothetical protein AMTR_s00061p00127560 [Amborella trichopoda]
           gi|548861724|gb|ERN19095.1| hypothetical protein
           AMTR_s00061p00127560 [Amborella trichopoda]
          Length = 114

 Score =  142 bits (359), Expect = 4e-32
 Identities = 68/74 (91%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+TLDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 25  VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEET 84

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPTAGRP+
Sbjct: 85  PRVKPKKPTAGRPL 98


>ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus communis]
           gi|223540149|gb|EEF41726.1| small nuclear
           ribonucleoprotein sm d1, putative [Ricinus communis]
          Length = 114

 Score =  142 bits (359), Expect = 4e-32
 Identities = 68/74 (91%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+TLDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 25  VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEET 84

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPTAGRP+
Sbjct: 85  PRVKPKKPTAGRPL 98


>gb|EXB29439.1| hypothetical protein L484_022110 [Morus notabilis]
          Length = 113

 Score =  142 bits (358), Expect = 5e-32
 Identities = 68/74 (91%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+TLDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 23  VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEET 82

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPTAGRP+
Sbjct: 83  PRVKPKKPTAGRPV 96


>ref|XP_003575247.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Brachypodium
           distachyon]
          Length = 114

 Score =  142 bits (358), Expect = 5e-32
 Identities = 67/74 (90%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+TLDHLSVRGN IRYYILPDSLNLETLL+EET
Sbjct: 25  VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLIEET 84

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPTAG+PM
Sbjct: 85  PRVKPKKPTAGKPM 98


>ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Vitis
           vinifera]
          Length = 114

 Score =  142 bits (358), Expect = 5e-32
 Identities = 67/74 (90%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+T+DHLSVRGN IRYYILPDS+NLETLLVEET
Sbjct: 25  VHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSINLETLLVEET 84

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPTAGRPM
Sbjct: 85  PRVKPKKPTAGRPM 98


>emb|CBI39815.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score =  142 bits (358), Expect = 5e-32
 Identities = 67/74 (90%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+T+DHLSVRGN IRYYILPDS+NLETLLVEET
Sbjct: 18  VHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSINLETLLVEET 77

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPTAGRPM
Sbjct: 78  PRVKPKKPTAGRPM 91


>ref|XP_002306766.1| small nuclear ribonucleoprotein D1 [Populus trichocarpa]
           gi|222856215|gb|EEE93762.1| small nuclear
           ribonucleoprotein D1 [Populus trichocarpa]
          Length = 112

 Score =  141 bits (356), Expect = 8e-32
 Identities = 66/74 (89%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+TLDHLSVRGN IRYYILPDSLNLETLL+EET
Sbjct: 25  VHGTITGVDISMNTHLKTVKLTVKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLIEET 84

Query: 183 PRVKPKKPTAGRPM 224
           P+VKPKKPTAGRP+
Sbjct: 85  PKVKPKKPTAGRPL 98


>gb|EOX94808.1| Small nuclear ribonucleoprotein family protein, partial [Theobroma
           cacao]
          Length = 174

 Score =  141 bits (355), Expect = 1e-31
 Identities = 67/74 (90%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP++LDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 85  VHGTITGVDISMNTHLKTVKLTLKGKNPVSLDHLSVRGNNIRYYILPDSLNLETLLVEET 144

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPTAGRP+
Sbjct: 145 PRVKPKKPTAGRPL 158


>ref|XP_006444105.1| hypothetical protein CICLE_v10022934mg [Citrus clementina]
           gi|568852153|ref|XP_006479744.1| PREDICTED: small
           nuclear ribonucleoprotein Sm D1-like [Citrus sinensis]
           gi|557546367|gb|ESR57345.1| hypothetical protein
           CICLE_v10022934mg [Citrus clementina]
          Length = 114

 Score =  140 bits (353), Expect = 2e-31
 Identities = 67/74 (90%), Positives = 70/74 (94%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+ LDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 25  VHGTITGVDISMNTHLKTVKLTLKGKNPVNLDHLSVRGNNIRYYILPDSLNLETLLVEET 84

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPTAGRP+
Sbjct: 85  PRVKPKKPTAGRPV 98


>ref|XP_004952927.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Setaria
           italica]
          Length = 114

 Score =  140 bits (353), Expect = 2e-31
 Identities = 66/74 (89%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+TLDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 25  VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEET 84

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPT+G+P+
Sbjct: 85  PRVKPKKPTSGKPL 98


>ref|XP_004242330.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Solanum
           lycopersicum] gi|460403318|ref|XP_004247138.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           [Solanum lycopersicum] gi|565372361|ref|XP_006352764.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           [Solanum tuberosum]
          Length = 114

 Score =  140 bits (353), Expect = 2e-31
 Identities = 67/74 (90%), Positives = 70/74 (94%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVDVSMNTHLK VK+T KGKNP+TLDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 25  VHGTITGVDVSMNTHLKAVKITLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEET 84

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPTAG+PM
Sbjct: 85  PRVKPKKPTAGKPM 98


>ref|XP_002454085.1| hypothetical protein SORBIDRAFT_04g024330 [Sorghum bicolor]
           gi|195604664|gb|ACG24162.1| small nuclear
           ribonucleoprotein Sm D1 [Zea mays]
           gi|238011798|gb|ACR36934.1| unknown [Zea mays]
           gi|241933916|gb|EES07061.1| hypothetical protein
           SORBIDRAFT_04g024330 [Sorghum bicolor]
           gi|413922841|gb|AFW62773.1| Small nuclear
           ribonucleoprotein Sm D1 isoform 1 [Zea mays]
           gi|413922842|gb|AFW62774.1| Small nuclear
           ribonucleoprotein Sm D1 isoform 2 [Zea mays]
          Length = 114

 Score =  140 bits (353), Expect = 2e-31
 Identities = 66/74 (89%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+TLDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 25  VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEET 84

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPT+G+P+
Sbjct: 85  PRVKPKKPTSGKPL 98


>gb|AGV54824.1| small nuclear ribonucleoprotein Sm D1 [Phaseolus vulgaris]
           gi|561012416|gb|ESW11277.1| hypothetical protein
           PHAVU_008G016100g [Phaseolus vulgaris]
          Length = 114

 Score =  140 bits (352), Expect = 2e-31
 Identities = 65/74 (87%), Positives = 71/74 (95%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+TLDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 25  VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEET 84

Query: 183 PRVKPKKPTAGRPM 224
           P++KPKKPTAG+P+
Sbjct: 85  PKIKPKKPTAGKPL 98


>ref|XP_004150106.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Cucumis
           sativus] gi|449476727|ref|XP_004154817.1| PREDICTED:
           small nuclear ribonucleoprotein Sm D1-like [Cucumis
           sativus]
          Length = 114

 Score =  140 bits (352), Expect = 2e-31
 Identities = 66/74 (89%), Positives = 70/74 (94%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLK VKLT KGKNP+T+DHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 25  VHGTITGVDISMNTHLKAVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEET 84

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPTAGRP+
Sbjct: 85  PRVKPKKPTAGRPL 98


>tpg|DAA37374.1| TPA: hypothetical protein ZEAMMB73_218857 [Zea mays]
          Length = 108

 Score =  140 bits (352), Expect = 2e-31
 Identities = 66/74 (89%), Positives = 70/74 (94%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+TLDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 18  VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEET 77

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPT G+P+
Sbjct: 78  PRVKPKKPTTGKPL 91


>gb|AFW58548.1| hypothetical protein ZEAMMB73_336389 [Zea mays]
          Length = 109

 Score =  140 bits (352), Expect = 2e-31
 Identities = 66/74 (89%), Positives = 70/74 (94%)
 Frame = +3

Query: 3   VHGTIIGVDVSMNTHLKTVKLTPKGKNPITLDHLSVRGNTIRYYILPDSLNLETLLVEET 182
           VHGTI GVD+SMNTHLKTVKLT KGKNP+TLDHLSVRGN IRYYILPDSLNLETLLVEET
Sbjct: 18  VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEET 77

Query: 183 PRVKPKKPTAGRPM 224
           PRVKPKKPT G+P+
Sbjct: 78  PRVKPKKPTTGKPL 91


Top