BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00020158
         (1382 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...   637   e-180
ref|XP_006427693.1| hypothetical protein CICLE_v10025096mg [Citr...   637   e-180
ref|XP_006493448.1| PREDICTED: pentatricopeptide repeat-containi...   636   e-180
gb|EMJ20180.1| hypothetical protein PRUPE_ppa003968mg [Prunus pe...   632   e-178
ref|XP_002313416.2| chlororespiratory reduction 2 family protein...   630   e-178
ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi...   623   e-176
ref|XP_004250510.1| PREDICTED: pentatricopeptide repeat-containi...   620   e-175
gb|EOY33923.1| Tetratricopeptide repeat (TPR)-like superfamily p...   619   e-175
ref|XP_006353232.1| PREDICTED: pentatricopeptide repeat-containi...   617   e-174
gb|EXC10733.1| hypothetical protein L484_025317 [Morus notabilis]     616   e-174
ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containi...   610   e-172
ref|XP_004307227.1| PREDICTED: pentatricopeptide repeat-containi...   607   e-171
ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arab...   603   e-170
ref|NP_190263.1| protein CHLORORESPIRATORY REDUCTION 2 [Arabidop...   602   e-169
ref|XP_006418855.1| hypothetical protein EUTSA_v10002433mg [Eutr...   600   e-169
ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containi...   600   e-169
gb|ESW11389.1| hypothetical protein PHAVU_008G025900g [Phaseolus...   598   e-168
ref|XP_006290707.1| hypothetical protein CARUB_v10016805mg [Caps...   596   e-168
ref|XP_004491940.1| PREDICTED: pentatricopeptide repeat-containi...   568   e-159
ref|XP_003621549.1| Pentatricopeptide repeat-containing protein ...   556   e-156

>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic [Vitis vinifera]
          Length = 658

 Score =  637 bits (1643), Expect = e-180
 Identities = 311/382 (81%), Positives = 346/382 (90%)
 Frame = +2

Query: 2    LERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGD 181
            LE  D+LPNSVTMVSVLQACAA++ALEQGKL+HGYILR GLD+ILPV+SALVT+YARCG+
Sbjct: 277  LENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGN 336

Query: 182  LDLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGA 361
            L+LG  VF +MEKRD+VSWNSLISSYGIHG G +A+ +F+EM+ QG+SPSPISFVSVLGA
Sbjct: 337  LELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGA 396

Query: 362  CSHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPK 541
            CSH+GLV+EGK++F+SMV+ H I P+VEHYACMVDLLGRANRLDEAAK+I DMR EPGPK
Sbjct: 397  CSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPK 456

Query: 542  VWGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE 721
            VWG+LLGSCRIHCNVELAERA+ RLFELEP NAGNYVLLADIYAEAKMW+EVKRVK LLE
Sbjct: 457  VWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLE 516

Query: 722  ARGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLY 901
            ARGLQKV G S IE+RRKIYS  S DE NPQIEQ+HALL+ LS EM EKGYVP TKVVLY
Sbjct: 517  ARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLY 576

Query: 902  DLDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREI 1081
            DLD EEK+RIVLGHSEKLA+AFGLIN  KGETIRITKNLRLCEDCHS TKFISKFANREI
Sbjct: 577  DLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREI 636

Query: 1082 LVRDINRFHHFKDGECSCRDYW 1147
            LVRD+NRFH F+DG CSC DYW
Sbjct: 637  LVRDVNRFHLFQDGVCSCGDYW 658



 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 60/187 (32%), Positives = 106/187 (56%), Gaps = 6/187 (3%)
 Frame = +2

Query: 35  TMVSVLQACAA----VSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           T   VL+AC A    VS L  G+ IHG+ILR+G +  + +M+ L+ MYAR G +     V
Sbjct: 181 TYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRV 240

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMV--QQGMSPSPISFVSVLGACSHSG 376
           F+QM  +++VSW+++I+ Y  +G   EAL +F++M+   Q + P+ ++ VSVL AC+   
Sbjct: 241 FDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALA 300

Query: 377 LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
            +++GKL+   +++  G+   +   + +V +  R   L E    + +  ++     W +L
Sbjct: 301 ALEQGKLMHGYILR-RGLDSILPVVSALVTVYARCGNL-ELGHRVFERMEKRDVVSWNSL 358

Query: 557 LGSCRIH 577
           + S  IH
Sbjct: 359 ISSYGIH 365



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P   T   ++ +C   ++L QG  +H +++ +G D    + + L+ MY+    +D  R V
Sbjct: 76  PTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKV 135

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHS--- 373
           F++  KR I  WN+L  +  + G G E L +++ M + G+     ++  VL AC  S   
Sbjct: 136 FDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAF 195

Query: 374 -GLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADM 520
             L+  G+ I   +++ HG    V     ++D+  R   +  A+++   M
Sbjct: 196 VSLLLNGREIHGHILR-HGFEGHVHIMTTLLDMYARFGCVLNASRVFDQM 244


>ref|XP_006427693.1| hypothetical protein CICLE_v10025096mg [Citrus clementina]
            gi|557529683|gb|ESR40933.1| hypothetical protein
            CICLE_v10025096mg [Citrus clementina]
          Length = 662

 Score =  637 bits (1642), Expect = e-180
 Identities = 306/382 (80%), Positives = 348/382 (91%)
 Frame = +2

Query: 2    LERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGD 181
            +E  D+ PNSVTMVSVLQACAA++ALEQGK+IHGYILR GLD+ILPV+SALVTMYARCG 
Sbjct: 281  MESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGK 340

Query: 182  LDLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGA 361
            L+LG+ VF+ M+KRD+VSWNSLISSYG+HG G +A+ +F+EM+  G+SPSPISFVSVLGA
Sbjct: 341  LELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGA 400

Query: 362  CSHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPK 541
            CSH+GLV+EGK++F+SM KEH + P+VEHYACMVDLLGRAN+L+EAAK+I D+R EPGPK
Sbjct: 401  CSHAGLVEEGKMLFESMRKEHMVRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPK 460

Query: 542  VWGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE 721
            VWG+LLGSCRIHCNVELAERAS+RLFELEP NAGNYVLLAD+YA A MWDEVKRVK+LLE
Sbjct: 461  VWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLE 520

Query: 722  ARGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLY 901
            ARGLQKV G S IEV+RK+YS  S DE NPQ EQ+HALL+NLS EM EKGYVPQTKVVLY
Sbjct: 521  ARGLQKVPGRSRIEVKRKMYSFVSVDEFNPQFEQLHALLINLSAEMKEKGYVPQTKVVLY 580

Query: 902  DLDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREI 1081
            DLDAEEK+RIVLGHSEKLAVAFGLIN SKGETIRITKNLRLCEDCHSFTKFISKFAN+EI
Sbjct: 581  DLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEI 640

Query: 1082 LVRDINRFHHFKDGECSCRDYW 1147
            LVRD+NRFHHF +G CSC DYW
Sbjct: 641  LVRDVNRFHHFHNGVCSCGDYW 662



 Score =  104 bits (260), Expect = 8e-20
 Identities = 60/187 (32%), Positives = 108/187 (57%), Gaps = 6/187 (3%)
 Frame = +2

Query: 35  TMVSVLQACAAVSA----LEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           T   VL+AC A S     L+ GK IH  +LR+G + I+ +M+ L+ MYAR G +     V
Sbjct: 185 TYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFV 244

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQG--MSPSPISFVSVLGACSHSG 376
           F+QM  +++VSW+++I+ Y  +G+  EAL +F+EM+ +   + P+ ++ VSVL AC+   
Sbjct: 245 FSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALA 304

Query: 377 LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
            +++GK+I   +++  G+   +   + +V +  R  +L E  + + D  D+     W +L
Sbjct: 305 ALEQGKMIHGYILR-RGLDSILPVVSALVTMYARCGKL-ELGQCVFDHMDKRDVVSWNSL 362

Query: 557 LGSCRIH 577
           + S  +H
Sbjct: 363 ISSYGVH 369



 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P   T   +L +CA  ++L     +H ++  NG D    +++ L+ +Y+    +D  R+V
Sbjct: 78  PTQHTYELLLLSCAHHNSLSDALNVHCHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHV 137

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEM--VQQGMSPSPISFVSVLGACSHS- 373
           F++  +R I  WN+L  +  + G G E L +++ M     G+     ++  VL AC  S 
Sbjct: 138 FDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASS 197

Query: 374 ---GLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGR 478
               L+  GK I  S+++ HG +  V     ++D+  R
Sbjct: 198 CGFSLLKHGKEIHASVLR-HGYNGIVHIMTTLIDMYAR 234


>ref|XP_006493448.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Citrus sinensis]
          Length = 662

 Score =  636 bits (1641), Expect = e-180
 Identities = 306/382 (80%), Positives = 349/382 (91%)
 Frame = +2

Query: 2    LERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGD 181
            +E  D+ PNSVTMVSVLQACAA++ALEQGK+IHGYILR GLD+ILPV+SALVTMYARCG 
Sbjct: 281  MESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGK 340

Query: 182  LDLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGA 361
            L+LG+ VF+ M+KRD+VSWNSLISSYG+HG G +A+ +F+EM+  G+SPSPISFVSVLGA
Sbjct: 341  LELGQCVFDHMDKRDVVSWNSLISSYGVHGYGGKAIQIFKEMIYHGVSPSPISFVSVLGA 400

Query: 362  CSHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPK 541
            CSH+GLV+EGK++F+SM KEH I P+VEHYACMVDLLGRAN+L+EAAK+I D+R EPGPK
Sbjct: 401  CSHAGLVEEGKMLFESMRKEHMIRPSVEHYACMVDLLGRANKLEEAAKIIEDLRIEPGPK 460

Query: 542  VWGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE 721
            VWG+LLGSCRIHCNVELAERAS+RLFELEP NAGNYVLLAD+YA A MWDEVKRVK+LLE
Sbjct: 461  VWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLE 520

Query: 722  ARGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLY 901
            ARGLQKV G S IEV+RK+YS  S DE +PQ EQ+HALL+NLS EM EKGYVPQTKVVLY
Sbjct: 521  ARGLQKVPGRSRIEVKRKMYSFVSVDEFHPQFEQLHALLINLSAEMKEKGYVPQTKVVLY 580

Query: 902  DLDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREI 1081
            DLDAEEK+RIVLGHSEKLAVAFGLIN SKGETIRITKNLRLCEDCHSFTKFISKFAN+EI
Sbjct: 581  DLDAEEKERIVLGHSEKLAVAFGLINTSKGETIRITKNLRLCEDCHSFTKFISKFANKEI 640

Query: 1082 LVRDINRFHHFKDGECSCRDYW 1147
            LVRD+NRFHHF++G CSC DYW
Sbjct: 641  LVRDVNRFHHFRNGVCSCGDYW 662



 Score =  104 bits (260), Expect = 8e-20
 Identities = 60/187 (32%), Positives = 108/187 (57%), Gaps = 6/187 (3%)
 Frame = +2

Query: 35  TMVSVLQACAAVSA----LEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           T   VL+AC A S     L+ GK IH  +LR+G + I+ +M+ L+ MYAR G +     V
Sbjct: 185 TYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFV 244

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQG--MSPSPISFVSVLGACSHSG 376
           F+QM  +++VSW+++I+ Y  +G+  EAL +F+EM+ +   + P+ ++ VSVL AC+   
Sbjct: 245 FSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNSVTMVSVLQACAALA 304

Query: 377 LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
            +++GK+I   +++  G+   +   + +V +  R  +L E  + + D  D+     W +L
Sbjct: 305 ALEQGKMIHGYILR-RGLDSILPVVSALVTMYARCGKL-ELGQCVFDHMDKRDVVSWNSL 362

Query: 557 LGSCRIH 577
           + S  +H
Sbjct: 363 ISSYGVH 369



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P   T   +L +C   ++L     +H ++  NG D    +++ L+ +Y+    +D  R+V
Sbjct: 78  PTQHTYELLLLSCTHHNSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHV 137

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEM--VQQGMSPSPISFVSVLGACSHS- 373
           F++  +R I  WN+L  +  + G G E L +++ M     G+     ++  VL AC  S 
Sbjct: 138 FDKTRRRTIYVWNALFRALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASS 197

Query: 374 ---GLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGR 478
               L+  GK I  S+++ HG +  V     ++D+  R
Sbjct: 198 CGFSLLKHGKEIHASVLR-HGYNGIVHIMTTLIDMYAR 234


>gb|EMJ20180.1| hypothetical protein PRUPE_ppa003968mg [Prunus persica]
          Length = 537

 Score =  632 bits (1630), Expect = e-178
 Identities = 304/382 (79%), Positives = 342/382 (89%)
 Frame = +2

Query: 2    LERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGD 181
            LE  D+LPNSVTMVSVLQACAA++ALEQG+ +HGYILR  LD+ILPVMS L+TMYARCG 
Sbjct: 156  LEAHDLLPNSVTMVSVLQACAALTALEQGRFLHGYILRRSLDSILPVMSTLITMYARCGK 215

Query: 182  LDLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGA 361
            LDLG  VF+ M K+D+VSWNSLISSYG+HG G +A+ +F++MV  G+SPS ISFVSVLGA
Sbjct: 216  LDLGERVFSMMNKKDVVSWNSLISSYGVHGYGKKAIQIFEDMVYHGVSPSHISFVSVLGA 275

Query: 362  CSHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPK 541
            CSH+GLV+EGK++F+SMVKEHG++P+VEHYACMVDLLGRANR DEAAK+I DMR EPG K
Sbjct: 276  CSHAGLVEEGKMLFNSMVKEHGVYPSVEHYACMVDLLGRANRFDEAAKVIEDMRIEPGAK 335

Query: 542  VWGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE 721
            VWGALLGSCRIHCNVELAERAS+RLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE
Sbjct: 336  VWGALLGSCRIHCNVELAERASKRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE 395

Query: 722  ARGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLY 901
            AR LQKV G SWIEV+RKIYS  S DE NPQ+EQ+HALL  LS EM ++GY PQTKVVLY
Sbjct: 396  ARELQKVPGRSWIEVKRKIYSFISVDEFNPQMEQLHALLAELSTEMKDRGYKPQTKVVLY 455

Query: 902  DLDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREI 1081
            DLD EEK+RIVLGHSEKLAVAFGLIN  +GETIRI+KNLRLCEDCH  TKFISKFA+REI
Sbjct: 456  DLDEEEKERIVLGHSEKLAVAFGLINTKRGETIRISKNLRLCEDCHYVTKFISKFADREI 515

Query: 1082 LVRDINRFHHFKDGECSCRDYW 1147
            LVRD+NRFHHF+DG CSC DYW
Sbjct: 516  LVRDVNRFHHFRDGVCSCGDYW 537



 Score = 94.7 bits (234), Expect = 8e-17
 Identities = 54/179 (30%), Positives = 106/179 (59%), Gaps = 2/179 (1%)
 Frame = +2

Query: 47  VLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNVFNQMEKRD 226
           V+  C + S L++GK IHG+ILR+G    + VM+ L+ MYAR G +    +VF+QM+ R+
Sbjct: 69  VVSECLS-SFLQKGKEIHGHILRHGYGAHVHVMTTLLDMYARFGCVSYASSVFDQMQIRN 127

Query: 227 IVSWNSLISSYGIHGLGSEALAVFQEMVQQG--MSPSPISFVSVLGACSHSGLVDEGKLI 400
           +VSW+++I+ Y  +G   EAL +F+EM+ +   + P+ ++ VSVL AC+    +++G+ +
Sbjct: 128 VVSWSAMIACYAKNGRPYEALELFREMILEAHDLLPNSVTMVSVLQACAALTALEQGRFL 187

Query: 401 FDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGALLGSCRIH 577
              +++   +   +   + ++ +  R  +LD   ++ + M ++     W +L+ S  +H
Sbjct: 188 HGYILR-RSLDSILPVMSTLITMYARCGKLDLGERVFS-MMNKKDVVSWNSLISSYGVH 244


>ref|XP_002313416.2| chlororespiratory reduction 2 family protein [Populus trichocarpa]
            gi|550331005|gb|EEE87371.2| chlororespiratory reduction 2
            family protein [Populus trichocarpa]
          Length = 650

 Score =  630 bits (1625), Expect = e-178
 Identities = 305/382 (79%), Positives = 344/382 (90%)
 Frame = +2

Query: 2    LERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGD 181
            LE  D+ PNSVTMVSVLQACAA++ALEQG+LIHGYILR GLD+ILPV+SALVTMYARCG 
Sbjct: 269  LETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGK 328

Query: 182  LDLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGA 361
            L+LG+ VF+QM+KRD+VSWNSLISSYG+HG G +A+ +F+EM   G+ PSP+SFVSVLGA
Sbjct: 329  LELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPVSFVSVLGA 388

Query: 362  CSHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPK 541
            CSH+GLVDEGK++F SM   HGI P+VEHYACMVDLLGRANRL+EAAK+I +MR EPGPK
Sbjct: 389  CSHAGLVDEGKMLFSSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPK 448

Query: 542  VWGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE 721
            VWG+LLGSCRIHCNVELAERAS RLF+LEP NAGNYVLLADIYAEA MWD VKRVKKLLE
Sbjct: 449  VWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLE 508

Query: 722  ARGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLY 901
            ARGLQKV G SWIEV+RKIYS  S DE+NP++EQ+HALLV LS E+ E+GYVPQTKVVLY
Sbjct: 509  ARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLY 568

Query: 902  DLDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREI 1081
            DL A EK+RIVLGHSEKLAVAFGLIN SKGE IRITK+LRLCEDCHSFTKFISKFAN+EI
Sbjct: 569  DLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEI 628

Query: 1082 LVRDINRFHHFKDGECSCRDYW 1147
            LVRD+NRFHHF+DG CSC DYW
Sbjct: 629  LVRDVNRFHHFRDGVCSCGDYW 650



 Score =  106 bits (265), Expect = 2e-20
 Identities = 62/187 (33%), Positives = 109/187 (58%), Gaps = 6/187 (3%)
 Frame = +2

Query: 35  TMVSVLQACAA----VSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           T   VL+AC A    VS L +G+ IH +ILR+G D  + +M+ LV MYA+ G +     V
Sbjct: 173 TYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCV 232

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMV--QQGMSPSPISFVSVLGACSHSG 376
           FNQM  +++VSW+++I+ Y  +G   EAL +F+E++   Q + P+ ++ VSVL AC+   
Sbjct: 233 FNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALA 292

Query: 377 LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
            +++G+LI   ++++ G+   +   + +V +  R  +L E  + + D  D+     W +L
Sbjct: 293 ALEQGRLIHGYILRK-GLDSILPVISALVTMYARCGKL-ELGQRVFDQMDKRDVVSWNSL 350

Query: 557 LGSCRIH 577
           + S  +H
Sbjct: 351 ISSYGVH 357



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P   T   ++ +C   ++L   + +H ++L NG D    + + L+ MY+    +D  R V
Sbjct: 68  PAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKV 127

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHS--- 373
           F++   R I  +N+L  +  + G G E L +++ M   G+     ++  VL AC  S   
Sbjct: 128 FDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECF 187

Query: 374 -GLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADM 520
             L+++G+ I   +++ HG    V     +VD+  +   +  A+ +   M
Sbjct: 188 VSLLNKGREIHAHILR-HGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQM 236


>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cucumis sativus]
            gi|449474033|ref|XP_004154055.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cucumis sativus]
            gi|449510921|ref|XP_004163811.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  623 bits (1606), Expect = e-176
 Identities = 299/382 (78%), Positives = 342/382 (89%)
 Frame = +2

Query: 2    LERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGD 181
            L   D +PNSVTMVSVLQACAA +ALEQGKLIH YILR GLD+ILPV+SAL+TMYARCG 
Sbjct: 268  LNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGK 327

Query: 182  LDLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGA 361
            L+ G+ +F++M K+D+V WNSLISSYG+HG G +A+ +F+EM+  G SPS ISF+SVLGA
Sbjct: 328  LESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGA 387

Query: 362  CSHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPK 541
            CSH+GLV+EGK +F+SMVKEHGI P+VEHYACMVDLLGRANRLDEAAK+I D+R EPGPK
Sbjct: 388  CSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPK 447

Query: 542  VWGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE 721
            VWG+LLG+CRIHC+VELAERAS+RLF+LEP NAGNYVLLADIYAEA+MWDEVKRVKKLL+
Sbjct: 448  VWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLD 507

Query: 722  ARGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLY 901
            +R LQKV G SWIEVRRKIYS  S DE NPQ EQ+HALLVNLS EM ++GY PQTK+VLY
Sbjct: 508  SRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLY 567

Query: 902  DLDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREI 1081
            DLD EEK+RIVLGHSEKLAVAFGLIN SKG+TIRITKNLRLCEDCHS TKFISKFA+REI
Sbjct: 568  DLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREI 627

Query: 1082 LVRDINRFHHFKDGECSCRDYW 1147
            +VRD+NRFHHFKDG CSC DYW
Sbjct: 628  MVRDLNRFHHFKDGVCSCGDYW 649



 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P   T   ++ + A  ++L     +H  ++  G D    + + L+ M++    +D  R V
Sbjct: 67  PTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKV 126

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHS--- 373
           F++  KR I  WN+L  +  + G G++ L ++  M   G+S    ++  +L AC  S   
Sbjct: 127 FDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECL 186

Query: 374 -GLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADM 520
              + +GK I   +++ HG    V     ++D+  R   +  A+ +  +M
Sbjct: 187 VSFLQKGKEIHAHILR-HGYGAHVHVMTTLMDMYARFGCVSYASAVFDEM 235


>ref|XP_004250510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Solanum lycopersicum]
          Length = 652

 Score =  620 bits (1599), Expect = e-175
 Identities = 301/378 (79%), Positives = 344/378 (91%), Gaps = 1/378 (0%)
 Frame = +2

Query: 17   MLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGR 196
            +LPNSVTMVSV+QACAA+ ALEQGK++HGYILR GLD+ILPV+SALVTMYARCG L+LGR
Sbjct: 275  LLPNSVTMVSVVQACAALGALEQGKVLHGYILRKGLDSILPVLSALVTMYARCGALELGR 334

Query: 197  NVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHSG 376
             VF+QM KRD+V+WNS+ISSYGIHG G +A+  F+EM++ G+SPSPISFVSVLGACSH+G
Sbjct: 335  RVFDQMGKRDVVAWNSMISSYGIHGFGGKAIETFREMIRHGVSPSPISFVSVLGACSHAG 394

Query: 377  LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
            LV+EGK +FDSM+KEH I PTVEHYACMVDLLGRAN+L+EAA +I DMR EPGPKVWG+L
Sbjct: 395  LVEEGKELFDSMLKEHNICPTVEHYACMVDLLGRANQLEEAAIIIQDMRIEPGPKVWGSL 454

Query: 557  LGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLEARGLQ 736
            LGSCRIHCNVELAERASRRLFELEP NAGNYVLLADIYAEAKMWDEVK+V+KLLEA+GL+
Sbjct: 455  LGSCRIHCNVELAERASRRLFELEPTNAGNYVLLADIYAEAKMWDEVKQVRKLLEAKGLR 514

Query: 737  KVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKG-YVPQTKVVLYDLDA 913
            KVSGCS IEV+RKIYSL+S DELN QIEQIHALL+ LS EM + G YVP T++VLYDL+ 
Sbjct: 515  KVSGCSMIEVKRKIYSLQSVDELNIQIEQIHALLLKLSTEMKQNGMYVPDTRIVLYDLEE 574

Query: 914  EEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREILVRD 1093
            EEK+RI+LGHSEKLAVAFGLIN SKG+ IRI+KNLRLCEDCHSFTK ISK+ NREILVRD
Sbjct: 575  EEKERILLGHSEKLAVAFGLINSSKGDPIRISKNLRLCEDCHSFTKLISKYTNREILVRD 634

Query: 1094 INRFHHFKDGECSCRDYW 1147
            INRFHHF +G CSC DYW
Sbjct: 635  INRFHHFANGVCSCGDYW 652



 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 53/187 (28%), Positives = 106/187 (56%)
 Frame = +2

Query: 17  MLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGR 196
           ++ +  T   VL+ACA V++L + K IH  + R+G      +M+ L+ +YAR G ++   
Sbjct: 175 IISDRFTYTYVLKACA-VASLPKHKEIHAQLFRHGYHTHTHIMTTLIDVYARFGYVENAA 233

Query: 197 NVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHSG 376
            VF+QM ++++VSW+++I  Y  +G   EA  VF++M+   + P+ ++ VSV+ AC+  G
Sbjct: 234 CVFDQMPQKNMVSWSAMIGCYAKNGKPLEAFDVFRDMMNHVLLPNSVTMVSVVQACAALG 293

Query: 377 LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
            +++GK++   ++++ G+   +   + +V +  R   L E  + + D   +     W ++
Sbjct: 294 ALEQGKVLHGYILRK-GLDSILPVLSALVTMYARCGAL-ELGRRVFDQMGKRDVVAWNSM 351

Query: 557 LGSCRIH 577
           + S  IH
Sbjct: 352 ISSYGIH 358



 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 40/180 (22%), Positives = 82/180 (45%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           PN  T   ++ +C+  ++   G  +H  ++ +G +    + + L+ MY+    +D  R V
Sbjct: 76  PNQHTYELLILSCSEKNSFHDGLTVHRKLIDDGFEQDPFLATKLINMYSNLDSIDHARQV 135

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHSGLV 382
           F+++  R I  WN+   +  + G G E L ++  M   G+     ++  VL AC+ + L 
Sbjct: 136 FDKINNRTIFLWNAFFRALTLAGNGVEVLKLYTRMNSIGIISDRFTYTYVLKACAVASLP 195

Query: 383 DEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGALLG 562
              ++   + +  HG H        ++D+  R   ++ AA  + D   +     W A++G
Sbjct: 196 KHKEI--HAQLFRHGYHTHTHIMTTLIDVYARFGYVENAA-CVFDQMPQKNMVSWSAMIG 252


>gb|EOY33923.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao]
          Length = 651

 Score =  619 bits (1597), Expect = e-175
 Identities = 295/382 (77%), Positives = 343/382 (89%)
 Frame = +2

Query: 2    LERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGD 181
            +E  D  PNSVTMVSVLQACAA++ALEQGKLIH YILR GLD++LPV+SAL+TMY+RCG 
Sbjct: 270  VETHDSFPNSVTMVSVLQACAALAALEQGKLIHAYILRRGLDSVLPVISALITMYSRCGK 329

Query: 182  LDLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGA 361
            L+LG+ +F+QMEKRD+VSWNSLISSY +HG G +A+ +FQEM+ QG+SPSP++FVSVLGA
Sbjct: 330  LELGQRIFDQMEKRDVVSWNSLISSYAVHGFGKKAIQIFQEMIHQGVSPSPVTFVSVLGA 389

Query: 362  CSHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPK 541
            CSH+GLV+EGK +FDSM KEHGI+P+VEHYACMVDLLGRANRL+EAA++I +MR EPG K
Sbjct: 390  CSHAGLVEEGKWLFDSMHKEHGIYPSVEHYACMVDLLGRANRLEEAARIIDEMRIEPGAK 449

Query: 542  VWGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE 721
            VWG+LLGSCRIHCNV+LAERAS RLF+LEP +AGNYVLLADIYAEAKMWDEVKRV+KLLE
Sbjct: 450  VWGSLLGSCRIHCNVDLAERASSRLFQLEPVSAGNYVLLADIYAEAKMWDEVKRVRKLLE 509

Query: 722  ARGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLY 901
             R LQKV G SWIEV+RKIYS  S DE NPQIE+I + L+ LS EM EKGYVPQTKVVLY
Sbjct: 510  TRSLQKVPGRSWIEVKRKIYSFVSVDESNPQIEEIQSFLIKLSAEMKEKGYVPQTKVVLY 569

Query: 902  DLDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREI 1081
            DL+  EK+RI+LGHSEKLAVAFGLIN +KGETIRITKNLRLCEDCH+ TKFISKFAN+EI
Sbjct: 570  DLNEGEKERILLGHSEKLAVAFGLINTNKGETIRITKNLRLCEDCHTLTKFISKFANKEI 629

Query: 1082 LVRDINRFHHFKDGECSCRDYW 1147
            LVRD+NRFHHF++G CSC DYW
Sbjct: 630  LVRDVNRFHHFQNGVCSCDDYW 651



 Score =  104 bits (260), Expect = 8e-20
 Identities = 63/187 (33%), Positives = 106/187 (56%), Gaps = 6/187 (3%)
 Frame = +2

Query: 35  TMVSVLQACAA----VSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           T   VL+AC A    VS L++GK IH YILR+G +  + +M+ LV MYAR G +     V
Sbjct: 174 TYTYVLKACVASECLVSLLKKGKEIHAYILRHGYEAHVHIMTTLVDMYARFGCVSCASFV 233

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQ--GMSPSPISFVSVLGACSHSG 376
           F +M  R++VSW+++I+ Y  +G   EAL +F+EM+ +     P+ ++ VSVL AC+   
Sbjct: 234 FGEMPVRNVVSWSAMIACYAKNGKSFEALELFREMMVETHDSFPNSVTMVSVLQACAALA 293

Query: 377 LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
            +++GKLI  + +   G+   +   + ++ +  R  +L E  + I D  ++     W +L
Sbjct: 294 ALEQGKLI-HAYILRRGLDSVLPVISALITMYSRCGKL-ELGQRIFDQMEKRDVVSWNSL 351

Query: 557 LGSCRIH 577
           + S  +H
Sbjct: 352 ISSYAVH 358



 Score = 75.1 bits (183), Expect = 6e-11
 Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P+  T   ++ +CA  ++L   + +H +I +NG D    +++ L++MY+    LD  R +
Sbjct: 69  PSQRTYELLILSCAHQNSLSLAQSLHSHISQNGFDQDPFLVTKLISMYSALDSLDDARKL 128

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHS--- 373
           F++  KR I  WN+L  +  + G G E L ++++M + G+     ++  VL AC  S   
Sbjct: 129 FDKTRKRTIFVWNALFRALTLAGFGEEVLGLYRQMNRTGIPSDRFTYTYVLKACVASECL 188

Query: 374 -GLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADM 520
             L+ +GK I  + +  HG    V     +VD+  R   +  A+ +  +M
Sbjct: 189 VSLLKKGKEI-HAYILRHGYEAHVHIMTTLVDMYARFGCVSCASFVFGEM 237


>ref|XP_006353232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Solanum tuberosum]
          Length = 653

 Score =  617 bits (1592), Expect = e-174
 Identities = 297/378 (78%), Positives = 345/378 (91%), Gaps = 1/378 (0%)
 Frame = +2

Query: 17   MLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGR 196
            +LPNSVTMVSV+QACAA+ ALEQGKL+HGY++R GLD+ILPV+SALVTMYARCG L+LGR
Sbjct: 276  LLPNSVTMVSVVQACAALGALEQGKLLHGYVVRKGLDSILPVLSALVTMYARCGALELGR 335

Query: 197  NVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHSG 376
             VF+QM KRD+V+WNS+ISSYGIHG G++A+  F+EM++ G+SPSPISFVSVLGACSH+G
Sbjct: 336  RVFDQMGKRDVVAWNSMISSYGIHGFGAKAIETFREMIRHGVSPSPISFVSVLGACSHAG 395

Query: 377  LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
            LV+EGK +FDSM KEH I+P+VEHYACMVDLLGRAN+L+EAA +I DMR EPGPKVWG+L
Sbjct: 396  LVEEGKQLFDSMWKEHKIYPSVEHYACMVDLLGRANQLEEAAIIIQDMRIEPGPKVWGSL 455

Query: 557  LGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLEARGLQ 736
            LGSCRIHCNVELAERASRRLFELEP NAGNYVLLADIYAEAKMWDEVK+V+KLLEA+GL+
Sbjct: 456  LGSCRIHCNVELAERASRRLFELEPTNAGNYVLLADIYAEAKMWDEVKQVRKLLEAKGLR 515

Query: 737  KVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKG-YVPQTKVVLYDLDA 913
            KVSGCS IEV+RKIYSL+S DE+N QIEQIHALL+ LS EM + G YVP T++VLYDL+ 
Sbjct: 516  KVSGCSMIEVKRKIYSLQSVDEINIQIEQIHALLLKLSMEMKQNGMYVPDTRIVLYDLEE 575

Query: 914  EEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREILVRD 1093
            EEK+RI+LGHSEKLAVAFGLIN SKG+ IRI+KNLRLCEDCHSFTK +SK+ NREILVRD
Sbjct: 576  EEKERILLGHSEKLAVAFGLINSSKGDPIRISKNLRLCEDCHSFTKLVSKYTNREILVRD 635

Query: 1094 INRFHHFKDGECSCRDYW 1147
            INRFHHF +G CSC DYW
Sbjct: 636  INRFHHFTNGVCSCGDYW 653



 Score = 97.8 bits (242), Expect = 9e-18
 Identities = 54/181 (29%), Positives = 104/181 (57%)
 Frame = +2

Query: 35  TMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNVFNQM 214
           T   VL+AC  V+++   K IH +I R+G +  + +M+ L+ +YAR G +     VF+QM
Sbjct: 182 TYTYVLKACV-VASIPNHKEIHAHIFRHGYETHIHIMTTLIDVYARFGSVQNATCVFSQM 240

Query: 215 EKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHSGLVDEGK 394
            ++++VSW+++I+ Y  +G   EA  VF++M+   + P+ ++ VSV+ AC+  G +++GK
Sbjct: 241 PQKNMVSWSAMIACYAKNGKPLEAFDVFRDMMTHVLLPNSVTMVSVVQACAALGALEQGK 300

Query: 395 LIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGALLGSCRI 574
           L+   +V++ G+   +   + +V +  R   L E  + + D   +     W +++ S  I
Sbjct: 301 LLHGYVVRK-GLDSILPVLSALVTMYARCGAL-ELGRRVFDQMGKRDVVAWNSMISSYGI 358

Query: 575 H 577
           H
Sbjct: 359 H 359


>gb|EXC10733.1| hypothetical protein L484_025317 [Morus notabilis]
          Length = 659

 Score =  616 bits (1589), Expect = e-174
 Identities = 291/382 (76%), Positives = 340/382 (89%)
 Frame = +2

Query: 2    LERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGD 181
            LE  D LPNSVTMVSVLQACAA+ ALEQGKLIHGYILR GLD+ILPVMS LVTMYARCG 
Sbjct: 278  LENRDSLPNSVTMVSVLQACAAIVALEQGKLIHGYILRRGLDSILPVMSTLVTMYARCGK 337

Query: 182  LDLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGA 361
            L++G+ VF+QM+KRD+VSWNSLISSYGIHG G +A+ +F++M+  G+SP+ I+F+SVLGA
Sbjct: 338  LEIGQRVFDQMDKRDVVSWNSLISSYGIHGYGRKAIQIFKDMISNGVSPNEITFISVLGA 397

Query: 362  CSHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPK 541
            CSH+GLV EGK++FDSM +EHG++P++EHYAC+VDLLGRANRLDEAAK++ DMR EPG K
Sbjct: 398  CSHAGLVVEGKMLFDSMCREHGMYPSMEHYACLVDLLGRANRLDEAAKVVEDMRIEPGSK 457

Query: 542  VWGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE 721
            VWGALLGSC+IHCNV LAERA +RLFELEPRNAGNYVLLADIY+EAKMW EVKRVK+LLE
Sbjct: 458  VWGALLGSCKIHCNVGLAERACKRLFELEPRNAGNYVLLADIYSEAKMWGEVKRVKQLLE 517

Query: 722  ARGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLY 901
            A+ LQKV GCSWIEVR+K+YS  S DE N Q EQ+HALLV LS EM ++GYVPQT +VLY
Sbjct: 518  AKKLQKVPGCSWIEVRKKVYSFLSVDEFNHQSEQVHALLVKLSTEMKDRGYVPQTGIVLY 577

Query: 902  DLDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREI 1081
            DL+ EEK+R++LGHSEKLAVAFGLIN + GE IRI+KNLRLCEDCHS TKFISKF NREI
Sbjct: 578  DLEEEEKERVLLGHSEKLAVAFGLINTNNGEVIRISKNLRLCEDCHSVTKFISKFVNREI 637

Query: 1082 LVRDINRFHHFKDGECSCRDYW 1147
            +VRD+NRFHHF+DG CSC DYW
Sbjct: 638  VVRDVNRFHHFRDGVCSCGDYW 659



 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 60/187 (32%), Positives = 103/187 (55%), Gaps = 6/187 (3%)
 Frame = +2

Query: 35  TMVSVLQACAA----VSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           T   VL+AC A    +S L +GK IH ++LR G +  + +M+ LV MYAR G +     V
Sbjct: 182 TYTYVLKACVASESSISLLRKGKEIHAHVLRRGFEACVHIMTTLVDMYARFGCVLNASCV 241

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMS--PSPISFVSVLGACSHSG 376
           F++M  +++VSW+++I+ Y  +    EAL +F EM  +     P+ ++ VSVL AC+   
Sbjct: 242 FDEMPMKNVVSWSAMIACYVKNERPFEALELFWEMTLENRDSLPNSVTMVSVLQACAAIV 301

Query: 377 LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
            +++GKLI   +++  G+   +   + +V +  R  +L E  + + D  D+     W +L
Sbjct: 302 ALEQGKLIHGYILR-RGLDSILPVMSTLVTMYARCGKL-EIGQRVFDQMDKRDVVSWNSL 359

Query: 557 LGSCRIH 577
           + S  IH
Sbjct: 360 ISSYGIH 366


>ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Glycine max]
          Length = 658

 Score =  610 bits (1572), Expect = e-172
 Identities = 292/382 (76%), Positives = 333/382 (87%)
 Frame = +2

Query: 2    LERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGD 181
            LE  D +PNSVTMV+VLQACA ++ALEQGKLIHGYILR GLD+ILPV++AL+TMY RCG+
Sbjct: 277  LEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGE 336

Query: 182  LDLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGA 361
            + +G+ VF+ M+ RD+VSWNSLIS YG+HG G +A+ +F+ M+ QG SPS ISF++VLGA
Sbjct: 337  ILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGA 396

Query: 362  CSHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPK 541
            CSH+GLV+EGK++F+SM+ ++ IHP +EHYACMVDLLGRANRLDEA KLI DM  EPGP 
Sbjct: 397  CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPT 456

Query: 542  VWGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE 721
            VWG+LLGSCRIHCNVELAERAS  LFELEPRNAGNYVLLADIYAEAKMW E K V KLLE
Sbjct: 457  VWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLE 516

Query: 722  ARGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLY 901
            ARGLQK+ GCSWIEV+RK+YS  S DE NPQIE+IHALLV LS EM  +GYVPQT VVLY
Sbjct: 517  ARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLY 576

Query: 902  DLDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREI 1081
            DLD EEK+RIVLGHSEKLAVAFGLIN  KGETIRI KNLRLCEDCH+ TKFISKFANREI
Sbjct: 577  DLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREI 636

Query: 1082 LVRDINRFHHFKDGECSCRDYW 1147
            LVRD+NRFHHFKDG CSC DYW
Sbjct: 637  LVRDVNRFHHFKDGVCSCGDYW 658



 Score = 84.0 bits (206), Expect = 1e-13
 Identities = 51/187 (27%), Positives = 103/187 (55%), Gaps = 6/187 (3%)
 Frame = +2

Query: 35  TMVSVLQACA----AVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           T   VL+AC     +VS L++GK IH +ILR+G +  + VM+ L+ +YA+ G +    +V
Sbjct: 181 TYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSV 240

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMS--PSPISFVSVLGACSHSG 376
           F  M  ++ VSW+++I+ +  + +  +AL +FQ M+ +     P+ ++ V+VL AC+   
Sbjct: 241 FCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLA 300

Query: 377 LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
            +++GKLI   +++  G+   +     ++ + GR   +    ++  +M++      W +L
Sbjct: 301 ALEQGKLIHGYILR-RGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVS-WNSL 358

Query: 557 LGSCRIH 577
           +    +H
Sbjct: 359 ISIYGMH 365



 Score = 65.5 bits (158), Expect = 5e-08
 Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 4/170 (2%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P   T   ++ +CA  ++L  G  +H  ++ +G D    + + L+ MY   G +D  R V
Sbjct: 76  PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHSGL- 379
           F++  +R I  WN+L  +  + G G E L ++ +M   G+     ++  VL AC  S L 
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195

Query: 380 ---VDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADM 520
              + +GK I   +++ HG    +     ++D+  +   +  A  +   M
Sbjct: 196 VSPLQKGKEIHAHILR-HGYEANIHVMTTLLDVYAKFGSVSYANSVFCAM 244


>ref|XP_004307227.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 776

 Score =  607 bits (1565), Expect = e-171
 Identities = 295/382 (77%), Positives = 334/382 (87%)
 Frame = +2

Query: 2    LERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGD 181
            LE  DM PNSVTMVSVLQACAA++ALEQGK IHGYILR GLD+ LPVMS+L+TMYARCG 
Sbjct: 395  LEAPDMFPNSVTMVSVLQACAALAALEQGKFIHGYILRRGLDSTLPVMSSLITMYARCGK 454

Query: 182  LDLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGA 361
            L+L + VFN+++++D+VSWNSLISSYGIHG G  A+ VF++M+  G+SPS ISFVSVLGA
Sbjct: 455  LELAQQVFNKIKRKDVVSWNSLISSYGIHGYGKRAIQVFEDMIDHGVSPSYISFVSVLGA 514

Query: 362  CSHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPK 541
            CSH GLV+EGK+IF SMV+EHG++P++E YACMVDLLGRANRLDEAAK+I +MR EPG +
Sbjct: 515  CSHEGLVEEGKVIFQSMVREHGLYPSIEQYACMVDLLGRANRLDEAAKIIDNMRIEPGAQ 574

Query: 542  VWGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE 721
            VWGALLGSCRIH NVELAERAS+RLFELEPRNAGNYVLLADIYAEAKMWDEVKRVK+LLE
Sbjct: 575  VWGALLGSCRIHGNVELAERASKRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKRLLE 634

Query: 722  ARGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLY 901
             R LQKV G SW+EV RKIYS  S DE NPQ+EQ+HALL  LS EM  +GY PQTKVVLY
Sbjct: 635  DRELQKVPGRSWMEVNRKIYSFDSVDEFNPQMEQLHALLGELSMEMKGRGYKPQTKVVLY 694

Query: 902  DLDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREI 1081
            DLD EEK+RIVLGHSEKLAVAFGLIN   GE IRI+KNLRLCEDCH  TKFIS+F NREI
Sbjct: 695  DLDEEEKERIVLGHSEKLAVAFGLINTKPGEIIRISKNLRLCEDCHYVTKFISRFTNREI 754

Query: 1082 LVRDINRFHHFKDGECSCRDYW 1147
            LVRD+NRFHHF+DG CSC DYW
Sbjct: 755  LVRDVNRFHHFRDGICSCGDYW 776



 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 58/187 (31%), Positives = 108/187 (57%), Gaps = 6/187 (3%)
 Frame = +2

Query: 35  TMVSVLQACA----AVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           T   VL+AC     + S L++GK IHG+ILR+G    + V + L+ MYAR G +    +V
Sbjct: 299 TYTYVLKACVVSECSSSLLQKGKEIHGHILRHGYGAHVHVTTTLLDMYARFGCVSYASSV 358

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQG--MSPSPISFVSVLGACSHSG 376
           F+QM+ R++VSW+++I+ Y  +    EA  +F++M+ +   M P+ ++ VSVL AC+   
Sbjct: 359 FDQMQNRNVVSWSAMIACYAKNARPYEAWELFRKMILEAPDMFPNSVTMVSVLQACAALA 418

Query: 377 LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
            +++GK I   +++  G+  T+   + ++ +  R  +L+ A ++   ++ +     W +L
Sbjct: 419 ALEQGKFIHGYILR-RGLDSTLPVMSSLITMYARCGKLELAQQVFNKIKRKDVVS-WNSL 476

Query: 557 LGSCRIH 577
           + S  IH
Sbjct: 477 ISSYGIH 483



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P+  T   ++ +C    +L  G  +H +++  G D    + + L+ MY+    ++  R V
Sbjct: 194 PSQQTCELLILSCIRQDSLPDGLDVHRHLVNGGWDQDPFLATKLIEMYSELDSIENAREV 253

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGAC----SH 370
           F++  KR I  WN+L  +  + G G+E L ++++M   G+     ++  VL AC      
Sbjct: 254 FDKTHKRTIYMWNALFRALTLAGHGTEVLNLYRQMNAIGVPSDRFTYTYVLKACVVSECS 313

Query: 371 SGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWG 550
           S L+ +GK I   +++ HG    V     ++D+  R   +  A+ +   M++      W 
Sbjct: 314 SSLLQKGKEIHGHILR-HGYGAHVHVTTTLLDMYARFGCVSYASSVFDQMQNR-NVVSWS 371

Query: 551 ALL 559
           A++
Sbjct: 372 AMI 374


>ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
            lyrata] gi|297323351|gb|EFH53772.1| hypothetical protein
            ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata]
          Length = 657

 Score =  603 bits (1555), Expect = e-170
 Identities = 289/381 (75%), Positives = 334/381 (87%)
 Frame = +2

Query: 5    ERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDL 184
            E  D  PNSVTMVSVLQACA+++ALEQG+LIHGYILR GLD+ILPV+SALVTMY RCG L
Sbjct: 277  ETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKL 336

Query: 185  DLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGAC 364
            D+G+ VF++M  RD+VSWNSLISSYG+HG G +A+ +F+EM+  G SP+P++FVSVLGAC
Sbjct: 337  DVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGAC 396

Query: 365  SHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKV 544
            SH GLV+EGK +F+SM ++HGI P VEHYACMVDLLGRANRLDEAAK++ DMR EPGPKV
Sbjct: 397  SHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456

Query: 545  WGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLEA 724
            WG+LLGSCRIH NVELAERASRRLF LEP+NAGNYVLLADIYAEA+MWDEVKRVKKLLE 
Sbjct: 457  WGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEH 516

Query: 725  RGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLYD 904
            RGLQK+ G  W+EVRRK+YS  S DE NP +EQIHA LV L+++M EKGY+PQTK VLY+
Sbjct: 517  RGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYE 576

Query: 905  LDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREIL 1084
            L+ EEK+RIVLGHSEKLA+AFGLIN SKGE IRITKNLRLCEDCH FTKFISKF  +EIL
Sbjct: 577  LETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEIL 636

Query: 1085 VRDINRFHHFKDGECSCRDYW 1147
            VRD+NRFH FK+G CSC DYW
Sbjct: 637  VRDVNRFHRFKNGVCSCGDYW 657



 Score =  104 bits (259), Expect = 1e-19
 Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 43/281 (15%)
 Frame = +2

Query: 35   TMVSVLQACAAVSA----LEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
            T   VL+AC A       L +GK IH ++ R G ++ + +M+ LV MYAR G +D    V
Sbjct: 180  TYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYV 239

Query: 203  FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQ--GMSPSPISFVSVLGACSHSG 376
            FN M  R++VSW+++I+ Y  +G   EAL  F+EM+ +    SP+ ++ VSVL AC+   
Sbjct: 240  FNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLA 299

Query: 377  LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
             +++G+LI   +++  G+   +   + +V + GR  +LD   ++   M D      W +L
Sbjct: 300  ALEQGRLIHGYILR-RGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVS-WNSL 357

Query: 557  LGSCRIH-------------------------------CNVELAERASRRLFELEPRNAG 643
            + S  +H                               C+ E      +RLFE   R+ G
Sbjct: 358  ISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHG 417

Query: 644  ------NYVLLADIYAEAKMWDEVKRVKKLLEARGLQKVSG 748
                  +Y  + D+   A   DE  ++ + +      KV G
Sbjct: 418  IKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWG 458



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P+  T   ++  C   S+L  G  +H +IL NG D    + + L+ MY+  G +D  R V
Sbjct: 75  PSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHSGL- 379
           F++  KR I  WN+L  +  + G G E L ++ +M + G+     ++  VL AC  S   
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194

Query: 380 ---VDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADM 520
              + +GK I   + +  G +  V     +VD+  R   +D A+ +   M
Sbjct: 195 ADHLTKGKEIHAHLTR-RGYNSHVYIMTTLVDMYARFGCVDYASYVFNGM 243


>ref|NP_190263.1| protein CHLORORESPIRATORY REDUCTION 2 [Arabidopsis thaliana]
            gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g46790, chloroplastic; AltName: Full=Protein
            CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
            gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis
            thaliana] gi|110741961|dbj|BAE98921.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|332644684|gb|AEE78205.1| protein chlororespiratory
            reduction 2 [Arabidopsis thaliana]
          Length = 657

 Score =  602 bits (1552), Expect = e-169
 Identities = 287/381 (75%), Positives = 334/381 (87%)
 Frame = +2

Query: 5    ERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDL 184
            E  D  PNSVTMVSVLQACA+++ALEQGKLIHGYILR GLD+ILPV+SALVTMY RCG L
Sbjct: 277  ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336

Query: 185  DLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGAC 364
            ++G+ VF++M  RD+VSWNSLISSYG+HG G +A+ +F+EM+  G SP+P++FVSVLGAC
Sbjct: 337  EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396

Query: 365  SHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKV 544
            SH GLV+EGK +F++M ++HGI P +EHYACMVDLLGRANRLDEAAK++ DMR EPGPKV
Sbjct: 397  SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456

Query: 545  WGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLEA 724
            WG+LLGSCRIH NVELAERASRRLF LEP+NAGNYVLLADIYAEA+MWDEVKRVKKLLE 
Sbjct: 457  WGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEH 516

Query: 725  RGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLYD 904
            RGLQK+ G  W+EVRRK+YS  S DE NP +EQIHA LV L+++M EKGY+PQTK VLY+
Sbjct: 517  RGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYE 576

Query: 905  LDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREIL 1084
            L+ EEK+RIVLGHSEKLA+AFGLIN SKGE IRITKNLRLCEDCH FTKFISKF  +EIL
Sbjct: 577  LETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEIL 636

Query: 1085 VRDINRFHHFKDGECSCRDYW 1147
            VRD+NRFH FK+G CSC DYW
Sbjct: 637  VRDVNRFHRFKNGVCSCGDYW 657



 Score =  103 bits (258), Expect = 1e-19
 Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 43/281 (15%)
 Frame = +2

Query: 35   TMVSVLQACAA----VSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
            T   VL+AC A    V+ L +GK IH ++ R G  + + +M+ LV MYAR G +D    V
Sbjct: 180  TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYV 239

Query: 203  FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQ--GMSPSPISFVSVLGACSHSG 376
            F  M  R++VSW+++I+ Y  +G   EAL  F+EM+++    SP+ ++ VSVL AC+   
Sbjct: 240  FGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLA 299

Query: 377  LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
             +++GKLI   +++  G+   +   + +V + GR  +L+   ++   M D      W +L
Sbjct: 300  ALEQGKLIHGYILR-RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVS-WNSL 357

Query: 557  LGSCRIH-------------------------------CNVELAERASRRLFELEPRNAG 643
            + S  +H                               C+ E      +RLFE   R+ G
Sbjct: 358  ISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHG 417

Query: 644  ------NYVLLADIYAEAKMWDEVKRVKKLLEARGLQKVSG 748
                  +Y  + D+   A   DE  ++ + +      KV G
Sbjct: 418  IKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWG 458



 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 61/249 (24%), Positives = 106/249 (42%), Gaps = 9/249 (3%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P+  T   ++  C   S+L     +H +IL NG D    + + L+ MY+  G +D  R V
Sbjct: 75  PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHS--- 373
           F++  KR I  WN+L  +  + G G E L ++ +M + G+     ++  VL AC  S   
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194

Query: 374 -GLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKV-- 544
              + +GK I   + +  G    V     +VD+  R   +D A+ +   M   P   V  
Sbjct: 195 VNHLMKGKEIHAHLTR-RGYSSHVYIMTTLVDMYARFGCVDYASYVFGGM---PVRNVVS 250

Query: 545 WGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIY---AEAKMWDEVKRVKKL 715
           W A++     +     A R  R +      ++ N V +  +    A     ++ K +   
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310

Query: 716 LEARGLQKV 742
           +  RGL  +
Sbjct: 311 ILRRGLDSI 319


>ref|XP_006418855.1| hypothetical protein EUTSA_v10002433mg [Eutrema salsugineum]
            gi|557096783|gb|ESQ37291.1| hypothetical protein
            EUTSA_v10002433mg [Eutrema salsugineum]
          Length = 659

 Score =  600 bits (1547), Expect = e-169
 Identities = 285/381 (74%), Positives = 336/381 (88%)
 Frame = +2

Query: 5    ERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDL 184
            E  D  PNSVTMVSVLQACA+++ALEQG+LIHGYILR GLD+ILPV+SALVTMY RCG L
Sbjct: 279  ETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGRL 338

Query: 185  DLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGAC 364
            ++G+ VF++M +RD+VSWNSLISSYG+HG G +A+ +F+EM+  G SP+P++FVSVLGAC
Sbjct: 339  EVGQRVFDRMHERDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGAC 398

Query: 365  SHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKV 544
            SH GLV+EGK +F+SM ++HGI P VEHYACMVDLLGRANRLDEAAK++ DMR EPGPKV
Sbjct: 399  SHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 458

Query: 545  WGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLEA 724
            WG+LLGSCRIH NVELAERASRRLF LEP+NAGNYVLLADIYAEA+MWD+VK+VKKLLE 
Sbjct: 459  WGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDKVKKVKKLLEY 518

Query: 725  RGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLYD 904
            RGLQK+ G  W+EVRRK+YS  S DE NP +EQIHALLV L+++M EKGY+PQTK VLYD
Sbjct: 519  RGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHALLVKLAEDMKEKGYIPQTKGVLYD 578

Query: 905  LDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREIL 1084
            L+ EEK+RIVLGHSEKLA+AFGLIN +KGE +RITKNLRLCEDCH FTKF+SKF  +EIL
Sbjct: 579  LETEEKERIVLGHSEKLALAFGLINTAKGEPVRITKNLRLCEDCHLFTKFMSKFMEKEIL 638

Query: 1085 VRDINRFHHFKDGECSCRDYW 1147
            VRD+NRFH FK+G CSC DYW
Sbjct: 639  VRDVNRFHRFKNGVCSCGDYW 659



 Score =  103 bits (257), Expect = 2e-19
 Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 44/282 (15%)
 Frame = +2

Query: 35   TMVSVLQACAA-----VSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRN 199
            T   VL+AC A        L +GK IH ++ R G ++ + +M+ L+ MYAR G +D   +
Sbjct: 181  TYTYVLKACVASPECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLLDMYARFGCVDYASH 240

Query: 200  VFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQ--GMSPSPISFVSVLGACSHS 373
            VF++M  R++VSW+++I+ Y  +G   EAL  F+EM+ +    SP+ ++ VSVL AC+  
Sbjct: 241  VFDEMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASL 300

Query: 374  GLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGA 553
              +++G+LI   +++  G+   +   + +V + GR  RL E  + + D   E     W +
Sbjct: 301  AALEQGRLIHGYILR-RGLDSILPVISALVTMYGRCGRL-EVGQRVFDRMHERDVVSWNS 358

Query: 554  LLGSCRIH-------------------------------CNVELAERASRRLFELEPRNA 640
            L+ S  +H                               C+ E      +RLFE   R+ 
Sbjct: 359  LISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDH 418

Query: 641  G------NYVLLADIYAEAKMWDEVKRVKKLLEARGLQKVSG 748
            G      +Y  + D+   A   DE  ++ + +      KV G
Sbjct: 419  GIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWG 460



 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P+  T   +++ C   S+L     +H +IL NG D    + + L+ MY+  G +D  R V
Sbjct: 76  PSQQTYELLIRCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDHARKV 135

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHS--- 373
           F++  KR I  WN+L  +  + G G E L ++ +M + G+     ++  VL AC  S   
Sbjct: 136 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASPEC 195

Query: 374 --GLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADM 520
               + +GK I   + +  G +  V     ++D+  R   +D A+ +  +M
Sbjct: 196 TADHLTKGKEIHAHLTR-RGYNSHVYIMTTLLDMYARFGCVDYASHVFDEM 245


>ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Glycine max]
          Length = 658

 Score =  600 bits (1546), Expect = e-169
 Identities = 286/381 (75%), Positives = 333/381 (87%)
 Frame = +2

Query: 5    ERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDL 184
            E  + +PNSVTMV++LQACA ++ALEQGKLIHGYILR  LD+ILPV++AL+TMY RCG++
Sbjct: 278  EACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEV 337

Query: 185  DLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGAC 364
             +G+ VF+ M+KRD+VSWNSLIS YG+HG G +A+ +F+ M+ QG+SPS ISF++VLGAC
Sbjct: 338  LMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGAC 397

Query: 365  SHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKV 544
            SH+GLV+EGK++F+SM+ ++ IHP +EHYACMVDLLGRANRL EA KLI DM  EPGP V
Sbjct: 398  SHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTV 457

Query: 545  WGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLEA 724
            WG+LLGSCRIHCNVELAERAS  LFELEPRNAGNYVLLADIYAEAK+W E K V KLLEA
Sbjct: 458  WGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEA 517

Query: 725  RGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLYD 904
            RGLQK+ GCSWIEV+RK+YS  S DE NPQIE+IHALLV LS EM  +GYVPQT VVLYD
Sbjct: 518  RGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYD 577

Query: 905  LDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREIL 1084
            LD EEK+RIVLGHSEKLAVAFGLIN +KGETIRI KNLRLCEDCH+ TKFISKFANREIL
Sbjct: 578  LDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREIL 637

Query: 1085 VRDINRFHHFKDGECSCRDYW 1147
            VRD+NRFHHF+DG CSC DYW
Sbjct: 638  VRDVNRFHHFRDGVCSCGDYW 658



 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 50/189 (26%), Positives = 101/189 (53%), Gaps = 8/189 (4%)
 Frame = +2

Query: 35  TMVSVLQACA----AVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           T   VL+AC     +V  L +GK IH +ILR+G +  + VM+ L+ +YA+ G +    +V
Sbjct: 181 TYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSV 240

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMS--PSPISFVSVLGACSHSG 376
           F  M  ++ VSW+++I+ +  + +  +AL +FQ M+ +  +  P+ ++ V++L AC+   
Sbjct: 241 FCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLA 300

Query: 377 LVDEGKLIFDSMVKEH--GIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWG 550
            +++GKLI   +++     I P +     ++ + GR   +    ++  +M+       W 
Sbjct: 301 ALEQGKLIHGYILRRQLDSILPVLN---ALITMYGRCGEVLMGQRVFDNMKKRDVVS-WN 356

Query: 551 ALLGSCRIH 577
           +L+    +H
Sbjct: 357 SLISIYGMH 365



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 4/170 (2%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P   T   ++ +CA  ++L  G  +H  ++ +G D    + + L+ MY   G +D    V
Sbjct: 76  PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHSGL- 379
           F++  +R I  WN+L  +  + G G E L ++ +M   G      ++  VL AC  S L 
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195

Query: 380 ---VDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADM 520
              + +GK I   +++ HG    +     ++D+  +   +  A  +   M
Sbjct: 196 VCPLRKGKEIHAHILR-HGYEANIHVMTTLLDVYAKFGSVSYANSVFCAM 244


>gb|ESW11389.1| hypothetical protein PHAVU_008G025900g [Phaseolus vulgaris]
          Length = 658

 Score =  598 bits (1541), Expect = e-168
 Identities = 282/382 (73%), Positives = 330/382 (86%)
 Frame = +2

Query: 2    LERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGD 181
            LE GD +PNSVTMVSVLQAC  ++ALEQGKLIHGYILR GLD+ILPV+SAL+TMY RCG+
Sbjct: 277  LEAGDSVPNSVTMVSVLQACGGLAALEQGKLIHGYILRRGLDSILPVLSALITMYGRCGE 336

Query: 182  LDLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGA 361
            + +G+ VF+ M+ RD++SWNSLIS YG+HG G +A+ +F+ M+ QG+SPS ISF++VLGA
Sbjct: 337  ISMGQRVFDSMKNRDVISWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGA 396

Query: 362  CSHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPK 541
            C H+GLV+EGK++F+SM  ++ I P +EHYAC+VDLLGRANRLDEA KLI DM  EPGP 
Sbjct: 397  CGHAGLVEEGKILFESMPSKYRIDPGMEHYACVVDLLGRANRLDEAIKLIEDMHFEPGPT 456

Query: 542  VWGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE 721
            VWG+LLGSCRIHCNVELAERAS  LFELEP+NAGNYVLLAD YAEAKMW E + V KLLE
Sbjct: 457  VWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLADTYAEAKMWSESRSVMKLLE 516

Query: 722  ARGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLY 901
            ARGLQK+ GCSWIEV+RK+YS  S DE NPQIE++ AL+V LS EM E+GYVP T VVLY
Sbjct: 517  ARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEVQALIVKLSTEMKEQGYVPHTNVVLY 576

Query: 902  DLDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREI 1081
            DLD EEK++IVLGHSEKLAVAFGLIN +KGETIRI KNLRLCEDCH+ TKFISKFANREI
Sbjct: 577  DLDEEEKEKIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREI 636

Query: 1082 LVRDINRFHHFKDGECSCRDYW 1147
            LVRD+NRFHHF+DG CSC DYW
Sbjct: 637  LVRDVNRFHHFRDGVCSCGDYW 658



 Score = 82.8 bits (203), Expect = 3e-13
 Identities = 54/187 (28%), Positives = 102/187 (54%), Gaps = 6/187 (3%)
 Frame = +2

Query: 35  TMVSVLQACA----AVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           T   VL+AC     +V  L +GK IH +ILR+G +  + VM+ L+ +YAR G +    +V
Sbjct: 181 TYTYVLKACVVSELSVCPLWKGKEIHAHILRHGYEANVHVMTTLLDVYARFGSVSDANSV 240

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQ-EMVQQGMS-PSPISFVSVLGACSHSG 376
           F  M  ++ VSW+++I+ +  + +  +AL +FQ  M++ G S P+ ++ VSVL AC    
Sbjct: 241 FCAMPAKNFVSWSAMIACFAKNDMPMKALELFQLMMLEAGDSVPNSVTMVSVLQACGGLA 300

Query: 377 LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
            +++GKLI   +++  G+   +   + ++ + GR   +    ++   M++      W +L
Sbjct: 301 ALEQGKLIHGYILR-RGLDSILPVLSALITMYGRCGEISMGQRVFDSMKNRDVIS-WNSL 358

Query: 557 LGSCRIH 577
           +    +H
Sbjct: 359 ISIYGMH 365



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 4/170 (2%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P   T   ++ +CA  ++L  G  IH ++   G D    + + L+ MY   G +D  R V
Sbjct: 76  PTQQTFEHLIYSCAQQNSLSDGLHIHRHLTNRGFDQDPFLATKLINMYYELGSIDRARKV 135

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHSGL- 379
           F++  +R I  WN+L  +  + G G E L ++ +M   G+     ++  VL AC  S L 
Sbjct: 136 FDETLERTIYVWNALFRALAMVGRGEELLDLYAQMNSTGVPSDRFTYTYVLKACVVSELS 195

Query: 380 ---VDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADM 520
              + +GK I   +++ HG    V     ++D+  R   + +A  +   M
Sbjct: 196 VCPLWKGKEIHAHILR-HGYEANVHVMTTLLDVYARFGSVSDANSVFCAM 244


>ref|XP_006290707.1| hypothetical protein CARUB_v10016805mg [Capsella rubella]
            gi|482559414|gb|EOA23605.1| hypothetical protein
            CARUB_v10016805mg [Capsella rubella]
          Length = 657

 Score =  596 bits (1536), Expect = e-168
 Identities = 284/381 (74%), Positives = 333/381 (87%)
 Frame = +2

Query: 5    ERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDL 184
            E  D  PNSVTMVSVLQACA+++ALEQG+LIHGYILR GLD+ILPV+SALVTMY RCG L
Sbjct: 277  ETKDASPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKL 336

Query: 185  DLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGAC 364
            ++G+ VF++M+ RD+VSWNSLISSYG+HG G +A+ +F+EM+  G +P+P++FVSVLGAC
Sbjct: 337  EVGQRVFDRMDDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGATPTPVTFVSVLGAC 396

Query: 365  SHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKV 544
            SH GLV+EGK +F+SM  +HGI P VEHYACMVDLLGRANRLDEAAK++ DMR EPGPKV
Sbjct: 397  SHEGLVEEGKRLFESMWSDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456

Query: 545  WGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLEA 724
            WG+LLGSCRIH NV LAERAS+RLF LEP+NAGNYVLLADIYAEA+MWDEVKRVKKLLE 
Sbjct: 457  WGSLLGSCRIHGNVGLAERASKRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEH 516

Query: 725  RGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLYD 904
            RGLQK+ G  W+EVR+K+YS  S DE NP +EQIHA LV L+++M EKGY+PQTK VLY+
Sbjct: 517  RGLQKLPGRCWMEVRKKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYE 576

Query: 905  LDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREIL 1084
            L+ EEK+RIVLGHSEKLA+AFGLIN SKGE IRITKNLRLCEDCH FTKFISKF  +EIL
Sbjct: 577  LETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEIL 636

Query: 1085 VRDINRFHHFKDGECSCRDYW 1147
            VRD+NRFH FK+G CSC DYW
Sbjct: 637  VRDVNRFHRFKNGVCSCGDYW 657



 Score =  103 bits (256), Expect = 2e-19
 Identities = 60/187 (32%), Positives = 106/187 (56%), Gaps = 6/187 (3%)
 Frame = +2

Query: 35  TMVSVLQACAA----VSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           T   VL+AC A     + L +GK IH ++ R G ++ + +M+ L+ MYAR G +D    V
Sbjct: 180 TYTYVLKACVASECTANCLTKGKEIHAHLTRRGYNSHVYIMTTLLDMYARFGCVDYASYV 239

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQ--GMSPSPISFVSVLGACSHSG 376
           FN M  +++VSW+++I+ Y  +G   EAL  F+EM+ +    SP+ ++ VSVL AC+   
Sbjct: 240 FNGMPVKNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDASPNSVTMVSVLQACASLA 299

Query: 377 LVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVWGAL 556
            +++G+LI   +++  G+   +   + +V + GR  +L E  + + D  D+     W +L
Sbjct: 300 ALEQGRLIHGYILR-RGLDSILPVISALVTMYGRCGKL-EVGQRVFDRMDDRDVVSWNSL 357

Query: 557 LGSCRIH 577
           + S  +H
Sbjct: 358 ISSYGVH 364



 Score = 68.2 bits (165), Expect = 8e-09
 Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P+  T   ++  C   S+    + +H +IL NG D    + + L+ MY+  G +D  R V
Sbjct: 75  PSQQTYELLILCCGHHSSFSDARRVHRHILDNGFDQDPFLATKLIGMYSDLGSVDYARKV 134

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHS--- 373
           F++  KR I  WN+L  +  + G G E L ++ +M + G+     ++  VL AC  S   
Sbjct: 135 FDKTHKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194

Query: 374 -GLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADM 520
              + +GK I   + +  G +  V     ++D+  R   +D A+ +   M
Sbjct: 195 ANCLTKGKEIHAHLTR-RGYNSHVYIMTTLLDMYARFGCVDYASYVFNGM 243


>ref|XP_004491940.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
            chloroplastic-like [Cicer arietinum]
          Length = 661

 Score =  568 bits (1465), Expect = e-159
 Identities = 265/382 (69%), Positives = 324/382 (84%)
 Frame = +2

Query: 2    LERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGD 181
            LE  D +PN VTMVSVLQACA+++ALE GKL+HGYI+R GLD+ILPV++ L+TMY RCG+
Sbjct: 280  LEACDSVPNPVTMVSVLQACASLAALEHGKLVHGYIIRKGLDSILPVLNTLITMYGRCGE 339

Query: 182  LDLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGA 361
            +  G+ VF+ M+KRD+VSWNSLIS YG+HG G +A+ +F+ M+  G+SPS ISF+++L A
Sbjct: 340  ISTGQRVFDYMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHNGVSPSYISFITILCA 399

Query: 362  CSHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPK 541
            CSH+GLV+EGK++F+SM+ ++ I P +EHYACMVDLLGRAN  DEA KLI DM  EPG  
Sbjct: 400  CSHAGLVEEGKILFESMLSKYRIRPRMEHYACMVDLLGRANMFDEAMKLIEDMDFEPGQT 459

Query: 542  VWGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE 721
            VWG+LLGSCRIHCNVELAERAS  LFELEP NAGNYVLLADIYA+A+MW++V+RV+KLLE
Sbjct: 460  VWGSLLGSCRIHCNVELAERASTMLFELEPMNAGNYVLLADIYAKARMWNDVRRVRKLLE 519

Query: 722  ARGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLY 901
             RGLQK+  CSWIE++RKIYSL S +E NPQIE++ A L+ L  E+  +GYVPQT VV+Y
Sbjct: 520  TRGLQKIPSCSWIEIKRKIYSLVSVEEYNPQIEELRAFLITLLTEIKNQGYVPQTNVVVY 579

Query: 902  DLDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREI 1081
            DLD EEK+RIVLGHS KLAVAFGLIN +KGETIRIT NLRLCEDCH+F KFISKFA REI
Sbjct: 580  DLDEEEKERIVLGHSGKLAVAFGLINTTKGETIRITNNLRLCEDCHAFMKFISKFAKREI 639

Query: 1082 LVRDINRFHHFKDGECSCRDYW 1147
            L+RD+NRFH+F+DG CSC DYW
Sbjct: 640  LLRDVNRFHYFRDGVCSCGDYW 661



 Score = 85.9 bits (211), Expect = 4e-14
 Identities = 51/190 (26%), Positives = 100/190 (52%), Gaps = 6/190 (3%)
 Frame = +2

Query: 26  NSVTMVSVLQACA----AVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLG 193
           N  T    L+AC     ++ +  +GK IH +ILR+G +  + VM+ L+ +YA+ G +   
Sbjct: 181 NRFTYTYALKACVVSELSICSFRKGKEIHAHILRHGYEGHVHVMTTLLDVYAKFGCISYA 240

Query: 194 RNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMS--PSPISFVSVLGACS 367
             VF  M  ++IVSW+++I+ Y  + +  +AL +FQ M+ +     P+P++ VSVL AC+
Sbjct: 241 SFVFGAMPAKNIVSWSAMIACYAKNEMPVKALELFQLMMLEACDSVPNPVTMVSVLQACA 300

Query: 368 HSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVW 547
               ++ GKL+   ++++ G+   +     ++ + GR   +    + + D   +     W
Sbjct: 301 SLAALEHGKLVHGYIIRK-GLDSILPVLNTLITMYGRCGEISTGQR-VFDYMKKRDVVSW 358

Query: 548 GALLGSCRIH 577
            +L+    +H
Sbjct: 359 NSLISIYGMH 368



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 6/185 (3%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P   T   ++ +CA  ++L  G  +H  ++ NGLD    + + L+ MY   G +D    V
Sbjct: 79  PTQKTFEVLICSCAQHNSLSDGLDVHHRLVGNGLDQDPFLATKLINMYCELGSVDHACKV 138

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHSGL- 379
           F++ +++ I  WN+L  +  + G G E L ++ +M   G+  +  ++   L AC  S L 
Sbjct: 139 FDETQEKTIYVWNALFRALAMLGRGEELLDLYGQMNWIGIPSNRFTYTYALKACVVSELS 198

Query: 380 ---VDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKV-- 544
                +GK I   +++ HG    V     ++D+  +   +  A+ +   M   P   +  
Sbjct: 199 ICSFRKGKEIHAHILR-HGYEGHVHVMTTLLDVYAKFGCISYASFVFGAM---PAKNIVS 254

Query: 545 WGALL 559
           W A++
Sbjct: 255 WSAMI 259


>ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical
            [Medicago truncatula] gi|355496564|gb|AES77767.1|
            Pentatricopeptide repeat-containing protein [Medicago
            truncatula]
          Length = 654

 Score =  556 bits (1433), Expect = e-156
 Identities = 257/382 (67%), Positives = 324/382 (84%)
 Frame = +2

Query: 2    LERGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGD 181
            LE  D +PN +TMVSVLQACA+++ALE GKL+H Y+LR GLD+ LPV++ L+TMY RCG+
Sbjct: 273  LEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGE 332

Query: 182  LDLGRNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGA 361
            +  G+ VF+ M+KRD++SWNSLIS YG+HGLG +A+ +F+ M+ +G+SPS I+F++VL A
Sbjct: 333  ISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCA 392

Query: 362  CSHSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPK 541
            CSH+GLV+E K++F+SM+ ++ IHP +EHYACMVD+LGRANRLDEA +LI +M  +PGP 
Sbjct: 393  CSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPT 452

Query: 542  VWGALLGSCRIHCNVELAERASRRLFELEPRNAGNYVLLADIYAEAKMWDEVKRVKKLLE 721
            VWG+LLGSCRIHCNVELAERAS  LFELEP+NAGNYVLL+ IYA+++MW++V+RV+K LE
Sbjct: 453  VWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLE 512

Query: 722  ARGLQKVSGCSWIEVRRKIYSLKSTDELNPQIEQIHALLVNLSKEMMEKGYVPQTKVVLY 901
            +RGLQK+  CSWIEV+RKIYSL S +E NPQIE++ A L+ L  E+  +GYVPQT VV Y
Sbjct: 513  SRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTY 572

Query: 902  DLDAEEKQRIVLGHSEKLAVAFGLINCSKGETIRITKNLRLCEDCHSFTKFISKFANREI 1081
            DLD EEK+RIVLGHS KLAVAFGLIN SKGE IRI+ NLRLCEDCH+F KF+SKF NREI
Sbjct: 573  DLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREI 632

Query: 1082 LVRDINRFHHFKDGECSCRDYW 1147
            L+RD+NRFH FKDG CSC DYW
Sbjct: 633  LLRDVNRFHCFKDGVCSCGDYW 654



 Score = 92.4 bits (228), Expect = 4e-16
 Identities = 57/190 (30%), Positives = 101/190 (53%), Gaps = 6/190 (3%)
 Frame = +2

Query: 26  NSVTMVSVLQACA----AVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLG 193
           N  T   VL+AC     ++  L +GK IH +ILR+G +  + VM+ L+ +YAR G +   
Sbjct: 174 NRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYA 233

Query: 194 RNVFNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMS--PSPISFVSVLGACS 367
            +VF  M  ++IVSW+++I+ Y  + +  +AL +FQ M+ +     P+PI+ VSVL AC+
Sbjct: 234 SSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACA 293

Query: 368 HSGLVDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDEPGPKVW 547
               ++ GKL+  + V   G+  T+     ++ + GR   +    + + D   +     W
Sbjct: 294 SLAALEHGKLV-HAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQR-VFDYMKKRDVISW 351

Query: 548 GALLGSCRIH 577
            +L+    +H
Sbjct: 352 NSLISIYGMH 361



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
 Frame = +2

Query: 23  PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 202
           P   T   ++ +C   ++L  G  +H  ++ +GLD    + + L+ MY   G +D    V
Sbjct: 72  PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131

Query: 203 FNQMEKRDIVSWNSLISSYGIHGLGSEALAVFQEMVQQGMSPSPISFVSVLGACSHSGL- 379
           F++  ++ I  WN++  +  +   G + L ++ +M   G+  +  ++  VL AC  S L 
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELS 191

Query: 380 ---VDEGKLIFDSMVKEHGIHPTVEHYACMVDLLGRANRLDEAAKLIADMRDE 529
              + +GK I   +++ HG    V     ++D+  R   +  A+ +   M D+
Sbjct: 192 ICPLRKGKEIHAHILR-HGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDK 243