BLASTX nr result
ID: Rehmannia26_contig00020062
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00020062
(354 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|5... 65 1e-08
ref|XP_003621771.1| F-box family protein [Medicago truncatula] g... 64 3e-08
ref|XP_004253306.1| PREDICTED: F-box/kelch-repeat protein At3g23... 63 4e-08
ref|XP_006600299.1| PREDICTED: F-box protein CPR30-like [Glycine... 62 8e-08
ref|XP_003598385.1| F-box family protein [Medicago truncatula] g... 62 1e-07
ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat... 60 2e-07
ref|XP_002891045.1| predicted protein [Arabidopsis lyrata subsp.... 60 2e-07
ref|XP_003605389.1| F-box protein [Medicago truncatula] gi|35550... 60 3e-07
ref|XP_006489871.1| PREDICTED: F-box protein CPR30-like [Citrus ... 59 5e-07
ref|XP_006380043.1| hypothetical protein POPTR_0008s20400g [Popu... 59 5e-07
ref|NP_174618.1| F-box protein [Arabidopsis thaliana] gi|7526838... 59 5e-07
gb|EMJ20555.1| hypothetical protein PRUPE_ppa019474mg, partial [... 59 7e-07
gb|EMJ17458.1| hypothetical protein PRUPE_ppa017255mg [Prunus pe... 59 7e-07
ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine... 59 9e-07
ref|XP_006421004.1| hypothetical protein CICLE_v10006809mg [Citr... 58 1e-06
ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548... 58 1e-06
ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ... 58 2e-06
gb|EXB41587.1| F-box protein [Morus notabilis] 57 2e-06
ref|XP_004229312.1| PREDICTED: F-box/kelch-repeat protein At3g06... 57 2e-06
ref|XP_006281869.1| hypothetical protein CARUB_v10028064mg, part... 57 3e-06
>ref|XP_002328907.1| predicted protein [Populus trichocarpa]
gi|566212205|ref|XP_006373085.1| hypothetical protein
POPTR_0017s08560g [Populus trichocarpa]
gi|550319791|gb|ERP50882.1| hypothetical protein
POPTR_0017s08560g [Populus trichocarpa]
Length = 374
Score = 64.7 bits (156), Expect = 1e-08
Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 19/122 (15%)
Frame = +3
Query: 45 VVQLPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHL--NKSVFRAIHYERW 218
+ +LP+EI+ EILSRL VK L+RFK V KTW +IS ++ HL K A HY+ +
Sbjct: 5 IPKLPSEIISEILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTKEDTNANHYKIF 64
Query: 219 L-------------FGPCKSFITPKEKL----PRDNLMEFVGSCDGLVCRYNRTQGIIHL 347
L F + +T + K P + +E +GSC+GLVC +I++
Sbjct: 65 LSTDPHLSIDPEAYFDADDNLLTTQLKFPVSYPEYSYIEILGSCNGLVCGLIHDNPLIYI 124
Query: 348 SN 353
N
Sbjct: 125 WN 126
>ref|XP_003621771.1| F-box family protein [Medicago truncatula]
gi|355496786|gb|AES77989.1| F-box family protein
[Medicago truncatula]
Length = 524
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 22/109 (20%)
Frame = +3
Query: 54 LPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNKSV----FRAIHYE--- 212
LP E++ EILSRL V+ L++ K VCK+W +IS I+ HLN+S F + YE
Sbjct: 94 LPDEVMAEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKMHLNRSARNPNFSVVSYETPS 153
Query: 213 ------RWLFGPCKSFI-TPKEKLPRD--------NLMEFVGSCDGLVC 314
R++ P S + P P+D + E +GSC+GLVC
Sbjct: 154 FDDDDHRFVPFPAGSLLDNPHITFPKDPYYLLHDKDCREVIGSCNGLVC 202
>ref|XP_004253306.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
lycopersicum]
Length = 394
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 25/125 (20%)
Frame = +3
Query: 54 LPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNKSVFRAIHYERWLFGPC 233
LP +++ +ILSRL+VK L++ + VCK+W +IS ++HL+ S R +H+ + G
Sbjct: 28 LPFDLIPDILSRLQVKFLLQLRCVCKSWKSLISDPKFAKKHLSVSTIRRLHFVNYEEGSL 87
Query: 234 KSFITPKEKL-------------------------PRDNLMEFVGSCDGLVCRYNRTQGI 338
+ ++ L PRD++ F+ SC+G++C +G+
Sbjct: 88 REYVLKSYPLHSNLASTNTNFTRFEYFANNFDGDYPRDSIRYFIDSCNGILCIGGGYKGL 147
Query: 339 IHLSN 353
+ L N
Sbjct: 148 VILWN 152
>ref|XP_006600299.1| PREDICTED: F-box protein CPR30-like [Glycine max]
Length = 392
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Frame = +3
Query: 15 MESNKKAAVVVVQLPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNKSVF 194
M +N + LP E++ EILSRL VK +IR +S CK W +I S+H I HLNKS
Sbjct: 1 MHANPITVSNMANLPVEVVTEILSRLPVKSVIRLRSTCKWWRSIIDSRHFILFHLNKSHT 60
Query: 195 RAI--HYERWLFGPCKSFITPK------EKLPRDNLMEFVGSCDGLVCRYN 323
I H + KS + P + N ++ +GS +GL+C N
Sbjct: 61 SLILRHRSQLYSLDLKSLLDPNPFELSHPLMCYSNSIKVLGSSNGLLCISN 111
>ref|XP_003598385.1| F-box family protein [Medicago truncatula]
gi|355487433|gb|AES68636.1| F-box family protein
[Medicago truncatula]
Length = 373
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 25/121 (20%)
Frame = +3
Query: 54 LPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNKSVFRAIHYERWLFGPC 233
LP +++ +ILSRL+VK L++ + VCK+W +IS ++HL+ S R +H+ + G
Sbjct: 28 LPFDLIPDILSRLQVKFLLQLRCVCKSWKSLISDPKFAKKHLSVSTIRRLHFVNYEEGSL 87
Query: 234 KSFITPKEKL-------------------------PRDNLMEFVGSCDGLVCRYNRTQGI 338
+ ++ L PRD++ F+ SC+G++C +G+
Sbjct: 88 REYVLKSYPLHSNLASTNTNFTRFEYFANNFDGDYPRDSIRYFIDSCNGILCIGGGYKGL 147
Query: 339 I 341
+
Sbjct: 148 V 148
>ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula]
gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein
[Medicago truncatula]
Length = 382
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 15/102 (14%)
Frame = +3
Query: 54 LPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNKSVFRAIHYERWLFGPC 233
LP++++ EI+ RL VK ++RF+ VCK+W +IS +++ L S R +H+ + +
Sbjct: 29 LPSDVIPEIICRLPVKFILRFRCVCKSWNSLISDPKFVKKQLCVSTTRNLHFRNYAYDSR 88
Query: 234 KSFIT---------------PKEKLPRDNLMEFVGSCDGLVC 314
K +T + P F+GSC+G+VC
Sbjct: 89 KYILTSYPLDSDFTDITSNFTQSDWPYAKFYRFIGSCNGIVC 130
>ref|XP_002891045.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336887|gb|EFH67304.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 398
Score = 60.5 bits (145), Expect = 2e-07
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Frame = +3
Query: 48 VQLPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHL-----NKSVFRAIHYE 212
V+LP +++EEIL RL VK L+R KSV K W +I S HL ++HL V
Sbjct: 98 VELPEDLVEEILHRLPVKYLVRLKSVSKVWKSLIESSHLAEKHLRLLEKKYGVKEMKITV 157
Query: 213 RWLFGP--CKSFITPKEKLP--RDNLMEFVGSCDGLVCRYNRTQGIIHLSN 353
+W C F + + + + L+ GSC+GLVC Y I+L N
Sbjct: 158 KWSTSKSICIKFFSRRSGMDSNSEGLLRVPGSCNGLVCVYELDLVYIYLLN 208
>ref|XP_003605389.1| F-box protein [Medicago truncatula] gi|355506444|gb|AES87586.1|
F-box protein [Medicago truncatula]
Length = 340
Score = 60.1 bits (144), Expect = 3e-07
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +3
Query: 6 G*SMESNKKAAVVVVQLPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNK 185
G SME+ K+ V V LP E++ E+LS L VK L+RF+ V K + +IS H +Q HL
Sbjct: 3 GDSMEAIKRPQSVAVVLPGELVAEVLSFLAVKSLMRFRCVNKFFNTLISDPHFVQMHLKN 62
Query: 186 SVFRA-IHYERWLFGPCKSFITPKEKLPRDNLMEFVGSCDGLVCRYN 323
S + Y RW +GSC+GL+C ++
Sbjct: 63 SAQNPHLDYRRW---------------------RVIGSCNGLICLFD 88
>ref|XP_006489871.1| PREDICTED: F-box protein CPR30-like [Citrus sinensis]
Length = 365
Score = 59.3 bits (142), Expect = 5e-07
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Frame = +3
Query: 45 VVQLPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNK------------- 185
+ +LP +I+ +ILSRL VK L+RFK V K W +IS + L +
Sbjct: 1 MAKLPQDIVADILSRLPVKSLLRFKCVSKPWFSLISDSQFAKTQLKQAKSDCSGNIRRVL 60
Query: 186 ---SVFRAIHYERWLFGP-CKSFIT-----PKEKLPRDNLMEFVGSCDGLVC 314
S ++I YE + FG S IT P EK+P D+ + +GSC+GLVC
Sbjct: 61 LTTSPLQSIDYEAFGFGDGSDSNITVQLGYPGEKVPEDD-ADIIGSCNGLVC 111
>ref|XP_006380043.1| hypothetical protein POPTR_0008s20400g [Populus trichocarpa]
gi|550333530|gb|ERP57840.1| hypothetical protein
POPTR_0008s20400g [Populus trichocarpa]
Length = 140
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Frame = +3
Query: 54 LPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNKSVFRA-IHYERW---L 221
LP +I+ ILSRL VK L+RFK V K+WC +IS I+ +LN ++ + + ++R L
Sbjct: 5 LPLDIISHILSRLPVKSLLRFKCVSKSWCSLISYPQFIRMNLNVAIADSYVKHQRQRLIL 64
Query: 222 FGPCKSFITPKEKLPRDNL--MEFVGSCDGLVC 314
P + P L + F+G C+GL+C
Sbjct: 65 ISPALHSLYPVYSLKKWGFDDFTFIGPCNGLIC 97
>ref|NP_174618.1| F-box protein [Arabidopsis thaliana]
gi|75268383|sp|Q9C800.1|FB34_ARATH RecName:
Full=Putative F-box protein At1g33530
gi|12322373|gb|AAG51205.1|AC051630_2 hypothetical
protein; 83642-85072 [Arabidopsis thaliana]
gi|332193482|gb|AEE31603.1| F-box protein [Arabidopsis
thaliana]
Length = 441
Score = 59.3 bits (142), Expect = 5e-07
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 14/118 (11%)
Frame = +3
Query: 42 VVVQLPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLN--------KSVFR 197
+ V+LP ++EEIL RL VK L+R KS+ K W +I S HL ++HL K +
Sbjct: 93 LAVELPDVLVEEILQRLPVKYLVRLKSISKGWKSLIESDHLAEKHLRLLEKKYGLKEI-- 150
Query: 198 AIHYERWLF-GPCKSFITPKEKL-----PRDNLMEFVGSCDGLVCRYNRTQGIIHLSN 353
I ER C F + + + D+L+ GSC+GLVC Y I+L N
Sbjct: 151 KITVERSTSKSICIKFFSRRSGMNAINSDSDDLLRVPGSCNGLVCVYELDSVYIYLLN 208
>gb|EMJ20555.1| hypothetical protein PRUPE_ppa019474mg, partial [Prunus persica]
Length = 184
Score = 58.9 bits (141), Expect = 7e-07
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 25/120 (20%)
Frame = +3
Query: 30 KAAVVVVQLPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNKSV------ 191
K + P EI++EIL RL VK +I+ SVCKTW +I +Q I+ HLN +V
Sbjct: 5 KIEAISCTFPQEIIQEILLRLTVKSVIKCISVCKTWRSMIINQSFIRTHLNPTVHVNNLN 64
Query: 192 ----------------FRAIHYERWLFGPCKSF---ITPKEKLPRDNLMEFVGSCDGLVC 314
++HY+ F I PK++L +L VG+C+GL+C
Sbjct: 65 ASHLFLIHRVADVLEEVYSLHYDNKAFDEYSKIEFPIAPKQELYNRHL-RVVGTCNGLIC 123
>gb|EMJ17458.1| hypothetical protein PRUPE_ppa017255mg [Prunus persica]
Length = 391
Score = 58.9 bits (141), Expect = 7e-07
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 20/104 (19%)
Frame = +3
Query: 63 EILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNKSV----------------F 194
+I+ +ILSRL VK L++F+ VCK+W +IS HL+++HL ++V
Sbjct: 27 DIIIDILSRLPVKSLLQFRCVCKSWHTLISDSHLVRKHLRRAVRGVNANSSKLLISNSPL 86
Query: 195 RAIHYERWLFGPCKSFITPKE-KLPRD---NLMEFVGSCDGLVC 314
+I YE SF+ KE LP + M VGSC+GL+C
Sbjct: 87 YSIDYE--ALEDVNSFVAIKELHLPAPLVLDRMSIVGSCNGLIC 128
>ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine max]
Length = 385
Score = 58.5 bits (140), Expect = 9e-07
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Frame = +3
Query: 42 VVVQLPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNKS------VFRAI 203
++ LP E++ EILSRL VK +IR +S CK W +I S+H + HLNKS R+
Sbjct: 1 MMANLPVEVVTEILSRLPVKSVIRLRSTCKWWRSIIDSRHFVLFHLNKSHSSLILRHRSH 60
Query: 204 HYERWLFGPCKSFITPKEKLP-RDNLMEFVGSCDGLVCRYN 323
Y L P ++ + L N ++ +GS +GL+C N
Sbjct: 61 LYSLDLKSPEQNPVELSHPLMCYSNSIKVLGSSNGLLCISN 101
>ref|XP_006421004.1| hypothetical protein CICLE_v10006809mg [Citrus clementina]
gi|557522877|gb|ESR34244.1| hypothetical protein
CICLE_v10006809mg [Citrus clementina]
Length = 340
Score = 58.2 bits (139), Expect = 1e-06
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Frame = +3
Query: 45 VVQLPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNK------------- 185
+ +LP +I+ +ILSRL VK L+RFK V K W +IS + L +
Sbjct: 1 MAKLPQDIVADILSRLPVKSLLRFKCVSKPWFSLISDSQFAKTQLKQAKSDCSGNIRRVL 60
Query: 186 ---SVFRAIHYERWLFGP-CKSFIT-----PKEKLPRDNLMEFVGSCDGLVC 314
S ++I YE + FG + IT P EK+P D+ + +GSC+GLVC
Sbjct: 61 LTTSPLQSIDYEAFGFGEGSDTNITAQLGYPGEKVPEDD-ADIIGSCNGLVC 111
>ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1|
F-box protein [Medicago truncatula]
Length = 382
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 15/102 (14%)
Frame = +3
Query: 54 LPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNKSVFRAIHYERWLFGPC 233
LP++++ EI+ RL VK ++RF+ VCK+W +IS +++ L S R +H+ + +
Sbjct: 29 LPSDVILEIICRLPVKFILRFQCVCKSWNSLISDPKFVKKQLCVSTTRNLHFLNYAYDSR 88
Query: 234 KSFIT---------------PKEKLPRDNLMEFVGSCDGLVC 314
K +T + P F+GSC+G+VC
Sbjct: 89 KYILTSYPLDSDFTDINSNFTQSDWPYAKFYRFIGSCNGIVC 130
>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 369
Score = 57.8 bits (138), Expect = 2e-06
Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 20/107 (18%)
Frame = +3
Query: 51 QLPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQ-----------------HLIQQHL 179
QLP EI+ +ILSRL VK LI+FK VC+TW +ISS HL + L
Sbjct: 7 QLPFEIIIDILSRLPVKHLIQFKCVCRTWQYLISSDPEFAKLHLERVLQVTNVHLHRLLL 66
Query: 180 NKSVFRAIHYERWLFGPCKSFITPKE---KLPRDNLMEFVGSCDGLV 311
+ F+++ E + I + P D+ EFVGSC+GL+
Sbjct: 67 SADPFQSVDMEAYCDADDNFLIREHRFPVRNPEDDDFEFVGSCNGLI 113
>gb|EXB41587.1| F-box protein [Morus notabilis]
Length = 392
Score = 57.4 bits (137), Expect = 2e-06
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Frame = +3
Query: 54 LPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNKSVFRAIHYERWLFGPC 233
LP+EI+ +IL+RL VKDL+R++ V K WC +I I+ HL+ S + LF
Sbjct: 5 LPSEIITKILTRLAVKDLLRYRGVSKPWCSLIDGPDFIKLHLDHSKRTNTNLNAVLFRDN 64
Query: 234 K------SFITPKEKLPR----DNLMEFVGSCDGLVCRYNRTQGII 341
++P KL D ++ +GSC+GL+ N + I+
Sbjct: 65 NLAWVDLDALSPAVKLNHPIDDDRRVDVMGSCNGLLALSNSSNDIV 110
>ref|XP_004229312.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
lycopersicum]
Length = 369
Score = 57.4 bits (137), Expect = 2e-06
Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 22/109 (20%)
Frame = +3
Query: 54 LPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHL----NKSVFRAI-----H 206
LP EI+ EIL RL VK L+R +SV K+W +IS++ I+ HL NK F +
Sbjct: 11 LPPEIISEILVRLPVKSLLRMRSVSKSWLSLISTRQFIKTHLKFSTNKQDFDMLLLSTSC 70
Query: 207 YERWL-FGPCKSFITPKEKLP----------RDNLME--FVGSCDGLVC 314
YE L F C + ++ P +D L++ FVGSCDGL+C
Sbjct: 71 YEYSLKFYTCSLYAIMYQESPHVPDDLNFPYKDPLVDYNFVGSCDGLLC 119
>ref|XP_006281869.1| hypothetical protein CARUB_v10028064mg, partial [Capsella rubella]
gi|482550573|gb|EOA14767.1| hypothetical protein
CARUB_v10028064mg, partial [Capsella rubella]
Length = 137
Score = 57.0 bits (136), Expect = 3e-06
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Frame = +3
Query: 51 QLPTEILEEILSRLRVKDLIRFKSVCKTWCQVISSQHLIQQHLNKSVFRAIHYERWLFGP 230
+LP E+LEEIL+R+ VK L RF VCK+W + + I+QH+ + R + + W P
Sbjct: 3 ELPFELLEEILARVPVKSLTRFICVCKSWRSLFQDERFIRQHMTHAQTRIMSFRGWETPP 62
Query: 231 CK-SFITPKEK---------LPRDNLM---EFVGSCDGLVC 314
C S+ K + + ++L+ +G C GL C
Sbjct: 63 CHFSYAVGKLETIVEEVKLNIGDESLLLNSSLIGHCHGLFC 103