BLASTX nr result
ID: Rehmannia26_contig00019845
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00019845
(916 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containi... 496 e-138
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi... 484 e-134
gb|EMJ06317.1| hypothetical protein PRUPE_ppa004835mg [Prunus pe... 483 e-134
ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containi... 482 e-134
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera] 481 e-133
ref|XP_006408151.1| hypothetical protein EUTSA_v10022408mg, part... 479 e-133
ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Caps... 478 e-132
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ... 478 e-132
ref|NP_566237.1| pentatricopeptide repeat-containing protein [Ar... 476 e-132
gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily p... 472 e-131
dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana] 472 e-131
gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis] 467 e-129
ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containi... 466 e-129
ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containi... 461 e-127
ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citr... 458 e-126
ref|XP_006375855.1| pentatricopeptide repeat-containing family p... 456 e-126
ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Popu... 453 e-125
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,... 443 e-122
ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containi... 437 e-120
ref|XP_003590960.1| Pentatricopeptide repeat-containing protein ... 423 e-116
>ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum tuberosum]
Length = 583
Score = 496 bits (1276), Expect = e-138
Identities = 243/307 (79%), Positives = 274/307 (89%), Gaps = 2/307 (0%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
GEPD+FAYNA ISG CKMN+I+ AN+VL+ M+ARGF PD VTYNI+IGSLC+RGKL A
Sbjct: 127 GEPDVFAYNALISGFCKMNKIEEANKVLNRMKARGFPPDSVTYNILIGSLCDRGKLGSAL 186
Query: 736 KMLDQLIEDN-CQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRG 560
K+LDQL E+N C+PTVITYTILIEATILEGG +EAMKL DEML RGLQPDMYTYN IIRG
Sbjct: 187 KLLDQLKEENNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDMYTYNAIIRG 246
Query: 559 MCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLN-QGKWDDGEKLMIEMFSTECEP 383
MCRE +MD+A+EFVRSL S+GCKPDVISYNILLRALL+ +GKW DGEKLM EM S CEP
Sbjct: 247 MCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHKGKWSDGEKLMNEMLSAGCEP 306
Query: 382 NVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFL 203
NVVTYSIL+SALCRDG+LDEAINLLK+M+D+GLTPDT+TYDPLISA CK GRLDLAI FL
Sbjct: 307 NVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRLDLAIKFL 366
Query: 202 DYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNH 23
DYMIS+GC PDIVNYNTILS +CK G ADEA+EVF KLAE GCPPDVSTYNT++SALWN+
Sbjct: 367 DYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNN 426
Query: 22 GDRSRAL 2
G R+RAL
Sbjct: 427 GGRARAL 433
Score = 223 bits (567), Expect = 1e-55
Identities = 104/305 (34%), Positives = 188/305 (61%), Gaps = 1/305 (0%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCN-RGKLDLAK 737
+PD++ YNA I G+C+ +D A + + S+ ++G PDV++YNI++ +L + +GK +
Sbjct: 234 QPDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHKGKWSDGE 293
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
K++++++ C+P V+TY+IL+ A +G +EA+ L M+ +GL PD +TY+ +I
Sbjct: 294 KLMNEMLSAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAF 353
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
C+ G +D A +F+ + S GC PD+++YN +L + +GK D+ ++ ++ C P+V
Sbjct: 354 CKGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDV 413
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
TY+ L+SAL +G A+ ++ M+++G+ PD TY+ LIS LC++G ++ A+ L
Sbjct: 414 STYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGD 473
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
M +G P ++ YN +L LCK EA+EV ++ E G P+ +TY ++ + G
Sbjct: 474 MEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGRRPNETTYILLIEGIGFSGR 533
Query: 16 RSRAL 2
R +A+
Sbjct: 534 RVQAM 538
Score = 77.8 bits (190), Expect = 5e-12
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Frame = -1
Query: 442 GKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTY 263
GK+D+ L+ + +P+V+ + LI C D+ + +++++ G PD + Y
Sbjct: 76 GKYDETLYLLECKLKSGYKPDVILCTKLIKGFCNSKNSDKGVKVMQILEQFG-EPDVFAY 134
Query: 262 DPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKL-A 86
+ LIS CK +++ A L+ M + G PD V YN ++ +LC G AL++ +L
Sbjct: 135 NALISGFCKMNKIEEANKVLNRMKARGFPPDSVTYNILIGSLCDRGKLGSALKLLDQLKE 194
Query: 85 ENGCPPDVSTYNTMVSA 35
EN C P V TY ++ A
Sbjct: 195 ENNCKPTVITYTILIEA 211
Score = 72.4 bits (176), Expect = 2e-10
Identities = 42/134 (31%), Positives = 68/134 (50%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PD+ YN +S L A +++S M +G PD +TYN +I LC G ++ A +
Sbjct: 411 PDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDL 470
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
L + + PTVITY IL+ EA+++ EM+ +G +P+ TY +I G+
Sbjct: 471 LGDMEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGRRPNETTYILLIEGIGF 530
Query: 550 EGLMDEAFEFVRSL 509
G +A E ++
Sbjct: 531 SGRRVQAMEMASAI 544
>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 484 bits (1245), Expect = e-134
Identities = 231/304 (75%), Positives = 270/304 (88%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
EPD+FAYNA ISG CK+N+I++A QVL+ M+ARGF PD+VTYNIMIGSLCNR KL LA K
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK 193
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
+LDQL+ DNC PTVITYTILIEATI+EGG NEAMKL +EML RGL PDMYTYN IIRGMC
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 253
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
+EG+++ A E + SLTS+GCKPDVISYNILLRA LNQGKWD+GEKL+ EMFS CEPN V
Sbjct: 254 KEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 313
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
TYSILIS+LCR G++DEAI++LKVM+++ LTPDTY+YDPLISALCKEGRLDLAI +DYM
Sbjct: 314 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 373
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDR 14
IS+GC PDIVNYNTIL+ALCKNGNA++ALE+F KL GCPP+VS+YNTM+SALW+ GDR
Sbjct: 374 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 433
Query: 13 SRAL 2
SRAL
Sbjct: 434 SRAL 437
Score = 228 bits (581), Expect = 2e-57
Identities = 105/303 (34%), Positives = 184/303 (60%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PD++ YNA I G+CK ++ A ++++S+ ++G PDV++YNI++ + N+GK D +K+
Sbjct: 240 PDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKL 299
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
+ ++ C+P +TY+ILI + G +EA+ + M+ + L PD Y+Y+ +I +C+
Sbjct: 300 VAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCK 359
Query: 550 EGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVT 371
EG +D A + + S GC PD+++YN +L AL G + ++ ++ C PNV +
Sbjct: 360 EGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSS 419
Query: 370 YSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMI 191
Y+ +ISAL G A+ ++ M+ +G+ PD TY+ LIS LC++G ++ AI LD M
Sbjct: 420 YNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDME 479
Query: 190 SSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRS 11
SG P +++YN +L LCK D+A+ +F ++ E GC P+ +TY ++ + G R+
Sbjct: 480 QSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRT 539
Query: 10 RAL 2
A+
Sbjct: 540 EAM 542
Score = 176 bits (445), Expect = 1e-41
Identities = 95/275 (34%), Positives = 146/275 (53%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD+ +YN + + D ++++ M +RG P+ VTY+I+I SLC G++D A
Sbjct: 274 KPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAIS 333
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
+L +IE P +Y LI A EG + A+ + D M+ G PD+ YNTI+ +C
Sbjct: 334 VLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC 393
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
+ G ++A E L GC P+V SYN ++ AL + G ++ M S +P+ +
Sbjct: 394 KNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEI 453
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
TY+ LIS LCRDG ++EAI LL M G P +Y+ ++ LCK R+D AI M
Sbjct: 454 TYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEM 513
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKL 89
I GC P+ Y ++ + G EA+E+ L
Sbjct: 514 IEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 548
Score = 164 bits (414), Expect = 6e-38
Identities = 83/260 (31%), Positives = 144/260 (55%)
Frame = -1
Query: 781 MIGSLCNRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRG 602
++ C GK + + L+ L+ P VI T LI+ +A ++ E+L
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132
Query: 601 LQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGE 422
+PD++ YN +I G C+ ++ A + + + +RG PD+++YNI++ +L N+ K
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192
Query: 421 KLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISAL 242
K++ ++ C P V+TY+ILI A +G ++EA+ LL+ ML GL PD YTY+ +I +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252
Query: 241 CKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDV 62
CKEG ++ A + + S GC PD+++YN +L A G DE ++ ++ GC P+
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312
Query: 61 STYNTMVSALWNHGDRSRAL 2
TY+ ++S+L G A+
Sbjct: 313 VTYSILISSLCRFGRIDEAI 332
Score = 99.0 bits (245), Expect = 2e-18
Identities = 51/173 (29%), Positives = 88/173 (50%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PDI YN ++ LCK + A ++ + +R G P+V +YN MI +L + G A M
Sbjct: 380 PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGM 439
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
+ +I P ITY LI +G EA+ L D+M G +P + +YN ++ G+C+
Sbjct: 440 VPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCK 499
Query: 550 EGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTE 392
+D+A + +GC+P+ +Y +L+ + G + +L +FS +
Sbjct: 500 VRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRD 552
Score = 74.7 bits (182), Expect = 4e-11
Identities = 38/103 (36%), Positives = 57/103 (55%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD YN+ IS LC+ ++ A +L M GF P V++YNI++ LC ++D A
Sbjct: 449 DPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIG 508
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLR 605
M ++IE C+P TY +LIE G EAM+L + + R
Sbjct: 509 MFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 551
>gb|EMJ06317.1| hypothetical protein PRUPE_ppa004835mg [Prunus persica]
Length = 489
Score = 483 bits (1242), Expect = e-134
Identities = 226/305 (74%), Positives = 270/305 (88%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
GEPD+F+YNA ISG CK N+I+SAN+VL MR++GFSPDVVTYNIMIGSLC+RGKL LA
Sbjct: 40 GEPDLFSYNALISGFCKANRIESANKVLDRMRSQGFSPDVVTYNIMIGSLCSRGKLGLAL 99
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
K++DQL++DNC+PTVITYTILIEATI++GG +EAMKL DEML RGL+PDMYTYN +IRGM
Sbjct: 100 KVMDQLVKDNCRPTVITYTILIEATIVDGGIDEAMKLLDEMLSRGLKPDMYTYNAVIRGM 159
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
CREG++D AF+FVRSL S+GC P+VISYNILLRALLN+GKW++GEKL+ M S CEPNV
Sbjct: 160 CREGMLDRAFQFVRSLDSKGCPPNVISYNILLRALLNRGKWEEGEKLVTNMCSRGCEPNV 219
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
VTYSILIS LCRDG++++A+N+LK+M +GLTPD Y+YDPL+SA CKEGRLDLAI FLDY
Sbjct: 220 VTYSILISTLCRDGKVEDAVNVLKIMKKKGLTPDAYSYDPLVSAFCKEGRLDLAIEFLDY 279
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
MIS GC PDIVNYNTIL+ALCK+G AD+AL++F L E GCPP+VS+YNTM SALWN GD
Sbjct: 280 MISDGCLPDIVNYNTILAALCKSGKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGD 339
Query: 16 RSRAL 2
R RAL
Sbjct: 340 RVRAL 344
Score = 229 bits (583), Expect = 1e-57
Identities = 108/304 (35%), Positives = 181/304 (59%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD++ YNA I G+C+ +D A Q + S+ ++G P+V++YNI++ +L NRGK + +K
Sbjct: 146 KPDMYTYNAVIRGMCREGMLDRAFQFVRSLDSKGCPPNVISYNILLRALLNRGKWEEGEK 205
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
++ + C+P V+TY+ILI +G +A+ + M +GL PD Y+Y+ ++ C
Sbjct: 206 LVTNMCSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKIMKKKGLTPDAYSYDPLVSAFC 265
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
+EG +D A EF+ + S GC PD+++YN +L AL GK D ++ + C PNV
Sbjct: 266 KEGRLDLAIEFLDYMISDGCLPDIVNYNTILAALCKSGKADQALQIFENLGEVGCPPNVS 325
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
+Y+ + SAL G A+ ++ M+ +G+ PD TY+ LIS LC++G +D AI L M
Sbjct: 326 SYNTMFSALWNCGDRVRALGMVSEMVGKGIKPDEITYNSLISCLCRDGMVDEAIGLLVDM 385
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDR 14
+ G P +++YN IL LCK +A++V ++ E GC P+ +TY ++ + G R
Sbjct: 386 ETGGFQPTVISYNIILLGLCKTRRVVDAIQVLTEMVEKGCRPNETTYILLIEGIGFAGWR 445
Query: 13 SRAL 2
+ A+
Sbjct: 446 AEAM 449
Score = 147 bits (371), Expect = 5e-33
Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 34/233 (14%)
Frame = -1
Query: 616 MLLRGL----------------------------------QPDMYTYNTIIRGMCREGLM 539
M+ +G +PD+++YN +I G C+ +
Sbjct: 1 MVNKGYKPDVILCTKLIKGFFNSRNIEKAIRVMQILEKYGEPDLFSYNALISGFCKANRI 60
Query: 538 DEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSIL 359
+ A + + + S+G PDV++YNI++ +L ++GK K+M ++ C P V+TY+IL
Sbjct: 61 ESANKVLDRMRSQGFSPDVVTYNIMIGSLCSRGKLGLALKVMDQLVKDNCRPTVITYTIL 120
Query: 358 ISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGC 179
I A DG +DEA+ LL ML GL PD YTY+ +I +C+EG LD A F+ + S GC
Sbjct: 121 IEATIVDGGIDEAMKLLDEMLSRGLKPDMYTYNAVIRGMCREGMLDRAFQFVRSLDSKGC 180
Query: 178 FPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHG 20
P++++YN +L AL G +E ++ + GC P+V TY+ ++S L G
Sbjct: 181 PPNVISYNILLRALLNRGKWEEGEKLVTNMCSRGCEPNVVTYSILISTLCRDG 233
Score = 96.3 bits (238), Expect = 1e-17
Identities = 51/171 (29%), Positives = 89/171 (52%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PDI YN ++ LCK + D A Q+ ++ G P+V +YN M +L N G A M
Sbjct: 287 PDIVNYNTILAALCKSGKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGM 346
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
+ +++ +P ITY LI +G +EA+ L +M G QP + +YN I+ G+C+
Sbjct: 347 VSEMVGKGIKPDEITYNSLISCLCRDGMVDEAIGLLVDMETGGFQPTVISYNIILLGLCK 406
Query: 550 EGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFS 398
+ +A + + + +GC+P+ +Y +L+ + G + +L +FS
Sbjct: 407 TRRVVDAIQVLTEMVEKGCRPNETTYILLIEGIGFAGWRAEAMELANSVFS 457
Score = 74.3 bits (181), Expect = 6e-11
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD YN+ IS LC+ +D A +L M GF P V++YNI++ LC ++ A +
Sbjct: 356 KPDEITYNSLISCLCRDGMVDEAIGLLVDMETGGFQPTVISYNIILLGLCKTRRVVDAIQ 415
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEML-LRGLQPDMY 584
+L +++E C+P TY +LIE G EAM+L + + LR + D +
Sbjct: 416 VLTEMVEKGCRPNETTYILLIEGIGFAGWRAEAMELANSVFSLRAISEDSF 466
>ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum lycopersicum]
Length = 575
Score = 482 bits (1241), Expect = e-134
Identities = 235/307 (76%), Positives = 269/307 (87%), Gaps = 2/307 (0%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
GEPD+FAYNA +SG CKMN+I+ AN+VL+ M+ GF PD VTYNI+IGSLC+RGKL A
Sbjct: 122 GEPDVFAYNALVSGFCKMNKIEEANKVLNRMKTHGFPPDSVTYNILIGSLCDRGKLGSAL 181
Query: 736 KMLDQLIED-NCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRG 560
+LDQL E+ NC+PTVITYTILIEATILEGG +EAMKL DEML GLQPDMYTYN IIRG
Sbjct: 182 MLLDQLKEEHNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSIGLQPDMYTYNAIIRG 241
Query: 559 MCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLN-QGKWDDGEKLMIEMFSTECEP 383
MCRE +MD+A+EFVRSL S+GCKPDVISYNILLRALL+ +GKW DGEKLM EM CEP
Sbjct: 242 MCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHRGKWSDGEKLMNEMLCAGCEP 301
Query: 382 NVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFL 203
NVVTYSIL+SALCRDG+LDEAINLLK+M+D+GLTPDT+TYDPLISA CK GRLD+AI FL
Sbjct: 302 NVVTYSILMSALCRDGKLDEAINLLKIMVDKGLTPDTFTYDPLISAFCKGGRLDMAIKFL 361
Query: 202 DYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNH 23
DYMI++GC PDIVNYNTILS +CK G ADEA+EVF KLAE GCPPDVSTYNT++SALWN+
Sbjct: 362 DYMITNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNN 421
Query: 22 GDRSRAL 2
G R+RAL
Sbjct: 422 GGRARAL 428
Score = 226 bits (575), Expect = 1e-56
Identities = 105/305 (34%), Positives = 189/305 (61%), Gaps = 1/305 (0%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCN-RGKLDLAK 737
+PD++ YNA I G+C+ +D A + + S+ ++G PDV++YNI++ +L + RGK +
Sbjct: 229 QPDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHRGKWSDGE 288
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
K++++++ C+P V+TY+IL+ A +G +EA+ L M+ +GL PD +TY+ +I
Sbjct: 289 KLMNEMLCAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMVDKGLTPDTFTYDPLISAF 348
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
C+ G +D A +F+ + + GC PD+++YN +L + +GK D+ ++ ++ C P+V
Sbjct: 349 CKGGRLDMAIKFLDYMITNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDV 408
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
TY+ L+SAL +G A+ ++ M+++G+ PD TY+ LIS LC++G ++ A+ L
Sbjct: 409 STYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGD 468
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
M +G P ++ YN +L LCK EA+EV ++ E GC P+ +TY ++ + G
Sbjct: 469 MEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGCRPNETTYILLIEGIGFSGR 528
Query: 16 RSRAL 2
R +A+
Sbjct: 529 RVQAM 533
Score = 72.8 bits (177), Expect = 2e-10
Identities = 42/134 (31%), Positives = 68/134 (50%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PD+ YN +S L A +++S M +G PD +TYN +I LC G ++ A +
Sbjct: 406 PDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDL 465
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
L + + PTVITY IL+ EA+++ EM+ +G +P+ TY +I G+
Sbjct: 466 LGDMEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGCRPNETTYILLIEGIGF 525
Query: 550 EGLMDEAFEFVRSL 509
G +A E ++
Sbjct: 526 SGRRVQAMEMATAI 539
Score = 69.7 bits (169), Expect = 1e-09
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Frame = -1
Query: 442 GKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTY 263
GK+D+ L+ + +P+V+ + LI D+ + +++++ G PD + Y
Sbjct: 71 GKYDETLYLLECKVKSGYKPDVILCTKLIKGFFNSKNSDKGVKVMQILEQFG-EPDVFAY 129
Query: 262 DPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKL-A 86
+ L+S CK +++ A L+ M + G PD V YN ++ +LC G AL + +L
Sbjct: 130 NALVSGFCKMNKIEEANKVLNRMKTHGFPPDSVTYNILIGSLCDRGKLGSALMLLDQLKE 189
Query: 85 ENGCPPDVSTYNTMVSA 35
E+ C P V TY ++ A
Sbjct: 190 EHNCKPTVITYTILIEA 206
>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 481 bits (1239), Expect = e-133
Identities = 230/304 (75%), Positives = 269/304 (88%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
EPD+FAYNA ISG CK+NQI++A QVL+ M+ARGF PD+VTYNIMIGSLCNR KL LA
Sbjct: 144 EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALT 203
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
+LDQL+ DNC PTVITYTILIEATI+EGG NEAMKL +EML RGL PDMYTYN IIRGMC
Sbjct: 204 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 263
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
+EG+++ A E + SLTS+GC+PDVISYNILLRA LNQGKWD+GEKL+ EMFS CEPN V
Sbjct: 264 KEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 323
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
TYSILIS+LCR G++DEAI++LKVM+++ LTPDTY+YDPLISALCKEGRLDLAI +DYM
Sbjct: 324 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 383
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDR 14
IS+GC PDIVNYNTIL+ALCKNGNA++ALE+F KL GCPP+VS+YNTM+SALW+ GDR
Sbjct: 384 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 443
Query: 13 SRAL 2
SRAL
Sbjct: 444 SRAL 447
Score = 228 bits (582), Expect = 2e-57
Identities = 105/303 (34%), Positives = 184/303 (60%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PD++ YNA I G+CK ++ A ++++S+ ++G PDV++YNI++ + N+GK D +K+
Sbjct: 250 PDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKL 309
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
+ ++ C+P +TY+ILI + G +EA+ + M+ + L PD Y+Y+ +I +C+
Sbjct: 310 VAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCK 369
Query: 550 EGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVT 371
EG +D A + + S GC PD+++YN +L AL G + ++ ++ C PNV +
Sbjct: 370 EGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSS 429
Query: 370 YSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMI 191
Y+ +ISAL G A+ ++ M+ +G+ PD TY+ LIS LC++G ++ AI LD M
Sbjct: 430 YNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDME 489
Query: 190 SSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRS 11
SG P +++YN +L LCK D+A+ +F ++ E GC P+ +TY ++ + G R+
Sbjct: 490 QSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRT 549
Query: 10 RAL 2
A+
Sbjct: 550 EAM 552
Score = 177 bits (449), Expect = 5e-42
Identities = 96/275 (34%), Positives = 146/275 (53%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
EPD+ +YN + + D ++++ M +RG P+ VTY+I+I SLC G++D A
Sbjct: 284 EPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAIS 343
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
+L +IE P +Y LI A EG + A+ + D M+ G PD+ YNTI+ +C
Sbjct: 344 VLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC 403
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
+ G ++A E L GC P+V SYN ++ AL + G ++ M S +P+ +
Sbjct: 404 KNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEI 463
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
TY+ LIS LCRDG ++EAI LL M G P +Y+ ++ LCK R+D AI M
Sbjct: 464 TYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEM 523
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKL 89
I GC P+ Y ++ + G EA+E+ L
Sbjct: 524 IEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 558
Score = 161 bits (408), Expect = 3e-37
Identities = 82/260 (31%), Positives = 143/260 (55%)
Frame = -1
Query: 781 MIGSLCNRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRG 602
++ C GK + + L+ L+ P VI T LI+ +A ++ E+L
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 142
Query: 601 LQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGE 422
+PD++ YN +I G C+ ++ A + + + +RG PD+++YNI++ +L N+ K
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202
Query: 421 KLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISAL 242
++ ++ C P V+TY+ILI A +G ++EA+ LL+ ML GL PD YTY+ +I +
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262
Query: 241 CKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDV 62
CKEG ++ A + + S GC PD+++YN +L A G DE ++ ++ GC P+
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322
Query: 61 STYNTMVSALWNHGDRSRAL 2
TY+ ++S+L G A+
Sbjct: 323 VTYSILISSLCRFGRIDEAI 342
Score = 99.0 bits (245), Expect = 2e-18
Identities = 51/173 (29%), Positives = 88/173 (50%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PDI YN ++ LCK + A ++ + +R G P+V +YN MI +L + G A M
Sbjct: 390 PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGM 449
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
+ +I P ITY LI +G EA+ L D+M G +P + +YN ++ G+C+
Sbjct: 450 VPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCK 509
Query: 550 EGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTE 392
+D+A + +GC+P+ +Y +L+ + G + +L +FS +
Sbjct: 510 VRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRD 562
Score = 74.7 bits (182), Expect = 4e-11
Identities = 38/103 (36%), Positives = 57/103 (55%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD YN+ IS LC+ ++ A +L M GF P V++YNI++ LC ++D A
Sbjct: 459 DPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIG 518
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLR 605
M ++IE C+P TY +LIE G EAM+L + + R
Sbjct: 519 MFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 561
>ref|XP_006408151.1| hypothetical protein EUTSA_v10022408mg, partial [Eutrema
salsugineum] gi|557109297|gb|ESQ49604.1| hypothetical
protein EUTSA_v10022408mg, partial [Eutrema salsugineum]
Length = 460
Score = 479 bits (1232), Expect = e-133
Identities = 222/305 (72%), Positives = 269/305 (88%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
G+PD+FAYNA I+G CKMN+I+ + +VL MR++GFSPD VTYNIMIGSLC+RGKLDLA
Sbjct: 8 GQPDVFAYNALINGFCKMNRIEDSTKVLDRMRSKGFSPDTVTYNIMIGSLCSRGKLDLAL 67
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
K+LDQL+ DNCQPTVITYTILIEAT+L+GG +EA+KL DEML RGL+PDM+TYNTIIRGM
Sbjct: 68 KVLDQLLTDNCQPTVITYTILIEATMLDGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 127
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
C+EG+++ AFE VR+L RGC+PDVISYNILLRALLNQGKW++GEKLM +MFS +CEPNV
Sbjct: 128 CKEGMVERAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCEPNV 187
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
VTYSILI+ LCRDG++DEA+NLLK+M ++GLTPD Y+YDPLI+A C+EGRLDLAI FL+
Sbjct: 188 VTYSILITTLCRDGKIDEALNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDLAIEFLET 247
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
MIS GC PDIVNYNT+L+ LCKNG AD+ALE+FGKL E GC P+ S+YNTM SALW+ GD
Sbjct: 248 MISEGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 307
Query: 16 RSRAL 2
+ R L
Sbjct: 308 KIRGL 312
Score = 233 bits (593), Expect = 1e-58
Identities = 106/304 (34%), Positives = 178/304 (58%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD+F YN I G+CK ++ A +++ ++ RG PDV++YNI++ +L N+GK + +K
Sbjct: 114 KPDMFTYNTIIRGMCKEGMVERAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEK 173
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
++ ++ + C+P V+TY+ILI +G +EA+ L M +GL PD Y+Y+ +I C
Sbjct: 174 LMTKMFSEKCEPNVVTYSILITTLCRDGKIDEALNLLKLMKEKGLTPDAYSYDPLIAAFC 233
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
REG +D A EF+ ++ S GC PD+++YN +L L GK D ++ ++ C PN
Sbjct: 234 REGRLDLAIEFLETMISEGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 293
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
+Y+ + SAL G + ++ M+ G+ PD TY+ +IS LC+EG ++ A L M
Sbjct: 294 SYNTMFSALWSSGDKIRGLQMISEMMSHGIDPDEITYNSMISCLCREGMVEEAFELLVDM 353
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDR 14
S P +V YN +L CK ++A++V + ENGC P+ +TY ++ + G R
Sbjct: 354 RSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLESMVENGCRPNETTYTMLIEGIGFAGYR 413
Query: 13 SRAL 2
+ A+
Sbjct: 414 AEAM 417
Score = 169 bits (428), Expect = 1e-39
Identities = 90/292 (30%), Positives = 152/292 (52%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
EPD+ +YN + L + + ++++ M + P+VVTY+I+I +LC GK+D A
Sbjct: 149 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCEPNVVTYSILITTLCRDGKIDEALN 208
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
+L + E P +Y LI A EG + A++ + M+ G PD+ YNT++ +C
Sbjct: 209 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDLAIEFLETMISEGCLPDIVNYNTVLATLC 268
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
+ G D+A E L GC P+ SYN + AL + G G +++ EM S +P+ +
Sbjct: 269 KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRGLQMISEMMSHGIDPDEI 328
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
TY+ +IS LCR+G ++EA LL M P TY+ ++ CK R++ AI L+ M
Sbjct: 329 TYNSMISCLCREGMVEEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLESM 388
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVS 38
+ +GC P+ Y ++ + G EA+E+ L ++ Y +++
Sbjct: 389 VENGCRPNETTYTMLIEGIGFAGYRAEAMELANDLVSRFLEHELCFYRCVLT 440
Score = 157 bits (398), Expect = 4e-36
Identities = 73/206 (35%), Positives = 125/206 (60%)
Frame = -1
Query: 619 EMLLRGLQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQG 440
E+L + QPD++ YN +I G C+ ++++ + + + S+G PD ++YNI++ +L ++G
Sbjct: 2 EILEKFGQPDVFAYNALINGFCKMNRIEDSTKVLDRMRSKGFSPDTVTYNIMIGSLCSRG 61
Query: 439 KWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYD 260
K D K++ ++ + C+P V+TY+ILI A DG +DEA+ LL ML GL PD +TY+
Sbjct: 62 KLDLALKVLDQLLTDNCQPTVITYTILIEATMLDGGVDEALKLLDEMLSRGLKPDMFTYN 121
Query: 259 PLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAEN 80
+I +CKEG ++ A + + GC PD+++YN +L AL G +E ++ K+
Sbjct: 122 TIIRGMCKEGMVERAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 181
Query: 79 GCPPDVSTYNTMVSALWNHGDRSRAL 2
C P+V TY+ +++ L G AL
Sbjct: 182 KCEPNVVTYSILITTLCRDGKIDEAL 207
>ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Capsella rubella]
gi|482565317|gb|EOA29506.1| hypothetical protein
CARUB_v10013258mg [Capsella rubella]
Length = 607
Score = 478 bits (1231), Expect = e-132
Identities = 223/305 (73%), Positives = 269/305 (88%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
G+PD+FAYNA I+G CKMN+ID A +VL MR++GFSPD VTYNIMIGSLC+RGKL LA
Sbjct: 158 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKGFSPDTVTYNIMIGSLCSRGKLVLAL 217
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
K+LDQL+ DNCQPTVITYTILIEAT+LEGG +EA+KL DEML RGL+PDM+TYNTIIRGM
Sbjct: 218 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 277
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
C+EG++D AFE VR+L RGC+PDVISYNILLRALLNQGKW++GEKLM +MFS +C+PNV
Sbjct: 278 CKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 337
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
VTYSILI+ LCRDG+++EA+NLLK+M ++GL+PD Y+YDPLI+A C+EGRLDLAI FL+
Sbjct: 338 VTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGRLDLAIEFLET 397
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
MIS GC PDIVNYNT+L+ LCKNG AD+ALE+FGKL E GC P+ S+YNTM SALW+ GD
Sbjct: 398 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 457
Query: 16 RSRAL 2
+ RAL
Sbjct: 458 KIRAL 462
Score = 235 bits (600), Expect = 2e-59
Identities = 109/304 (35%), Positives = 178/304 (58%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD+F YN I G+CK +D A +++ ++ RG PDV++YNI++ +L N+GK + +K
Sbjct: 264 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEK 323
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
++ ++ + C P V+TY+ILI +G EA+ L M +GL PD Y+Y+ +I C
Sbjct: 324 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFC 383
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
REG +D A EF+ ++ S GC PD+++YN +L L GK D ++ ++ C PN
Sbjct: 384 REGRLDLAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 443
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
+Y+ + SAL G A++++ M+ +G+ PD TY+ +IS LC+EG +D A L M
Sbjct: 444 SYNTMFSALWSSGDKIRALHMISEMVSQGIDPDEITYNSMISCLCREGMVDEAFDLLVDM 503
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDR 14
S P +V YN +L CK ++A++V + NGC P+ STY ++ + G R
Sbjct: 504 RSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLESMVGNGCRPNESTYTVLIEGIGFAGYR 563
Query: 13 SRAL 2
+ A+
Sbjct: 564 AEAM 567
Score = 166 bits (421), Expect = 9e-39
Identities = 85/255 (33%), Positives = 143/255 (56%)
Frame = -1
Query: 766 CNRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDM 587
C G + +L+ ++ P VI T LI+ +A+++ E+L + QPD+
Sbjct: 104 CRSGNYIESLHLLESMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 162
Query: 586 YTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIE 407
+ YN +I G C+ +D+A + + S+G PD ++YNI++ +L ++GK K++ +
Sbjct: 163 FAYNALINGFCKMNRIDDATRVLDRMRSKGFSPDTVTYNIMIGSLCSRGKLVLALKVLDQ 222
Query: 406 MFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGR 227
+ S C+P V+TY+ILI A +G +DEA+ LL ML GL PD +TY+ +I +CKEG
Sbjct: 223 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 282
Query: 226 LDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNT 47
+D A + + GC PD+++YN +L AL G +E ++ K+ C P+V TY+
Sbjct: 283 VDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 342
Query: 46 MVSALWNHGDRSRAL 2
+++ L G AL
Sbjct: 343 LITTLCRDGKIEEAL 357
Score = 118 bits (295), Expect = 4e-24
Identities = 70/218 (32%), Positives = 99/218 (45%), Gaps = 34/218 (15%)
Frame = -1
Query: 571 IIRGMCREGLMDEAFEFVRSLTSRGCKPDVI----------------------------- 479
I CR G E+ + S+ +G PDVI
Sbjct: 99 IFHRSCRSGNYIESLHLLESMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 158
Query: 478 -----SYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAIN 314
+YN L+ + DD +++ M S P+ VTY+I+I +LC G+L A+
Sbjct: 159 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKGFSPDTVTYNIMIGSLCSRGKLVLALK 218
Query: 313 LLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALC 134
+L +L + P TY LI A EG +D A+ LD M+S G PD+ YNTI+ +C
Sbjct: 219 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 278
Query: 133 KNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHG 20
K G D A E+ L GC PDV +YN ++ AL N G
Sbjct: 279 KEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQG 316
Score = 76.3 bits (186), Expect = 2e-11
Identities = 37/101 (36%), Positives = 60/101 (59%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD YN+ IS LC+ +D A +L MR+ F P VVTYNI++ C +++ A
Sbjct: 474 DPDEITYNSMISCLCREGMVDEAFDLLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAID 533
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEML 611
+L+ ++ + C+P TYT+LIE G EAM+L ++++
Sbjct: 534 VLESMVGNGCRPNESTYTVLIEGIGFAGYRAEAMELANDLV 574
>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330308|gb|EFH60727.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 598
Score = 478 bits (1229), Expect = e-132
Identities = 221/305 (72%), Positives = 269/305 (88%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
G+PD+FAYNA I+G CKMN+ID A +VL MR++ FSPD VTYNIMIGSLC+RGKLDLA
Sbjct: 150 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
K+LDQL+ DNCQPTVITYTILIEAT+LEGG +EA+KL DEML RGL+PDM+TYNTIIRGM
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
C+EG++D AFE +R+L +GC+PDVISYNILLRALLNQGKW++GEKLM +MFS +C+PNV
Sbjct: 270 CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 329
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
VTYSILI+ LCRDG+++EA+NLLK+M ++GLTPD Y+YDPLI+A C+EGRLD+AI FL+
Sbjct: 330 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 389
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
MIS GC PDIVNYNT+L+ LCKNG AD+ALE+FGKL E GC P+ S+YNTM SALW+ GD
Sbjct: 390 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 449
Query: 16 RSRAL 2
+ RAL
Sbjct: 450 KIRAL 454
Score = 234 bits (596), Expect = 4e-59
Identities = 108/304 (35%), Positives = 177/304 (58%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD+F YN I G+CK +D A +++ ++ +G PDV++YNI++ +L N+GK + +K
Sbjct: 256 KPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 315
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
++ ++ + C P V+TY+ILI +G EAM L M +GL PD Y+Y+ +I C
Sbjct: 316 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 375
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
REG +D A EF+ ++ S GC PD+++YN +L L GK D ++ ++ C PN
Sbjct: 376 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 435
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
+Y+ + SAL G A++++ M+ G+ PD TY+ +IS LC+EG +D A L M
Sbjct: 436 SYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDM 495
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDR 14
S P +V YN +L CK ++A++V + NGC P+ +TY ++ + G R
Sbjct: 496 RSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYR 555
Query: 13 SRAL 2
+ A+
Sbjct: 556 AEAM 559
Score = 167 bits (423), Expect = 5e-39
Identities = 84/255 (32%), Positives = 143/255 (56%)
Frame = -1
Query: 766 CNRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDM 587
C G + +L+ ++ P VI T LI+ +A+++ E+L + QPD+
Sbjct: 96 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDV 154
Query: 586 YTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIE 407
+ YN +I G C+ +D+A + + S+ PD ++YNI++ +L ++GK D K++ +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214
Query: 406 MFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGR 227
+ S C+P V+TY+ILI A +G +DEA+ LL ML GL PD +TY+ +I +CKEG
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274
Query: 226 LDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNT 47
+D A + + GC PD+++YN +L AL G +E ++ K+ C P+V TY+
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334
Query: 46 MVSALWNHGDRSRAL 2
+++ L G A+
Sbjct: 335 LITTLCRDGKIEEAM 349
Score = 122 bits (306), Expect = 2e-25
Identities = 70/218 (32%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Frame = -1
Query: 571 IIRGMCREGLMDEAFEFVRSLTSRGCKPDVI----------------------------- 479
I CR G E+ + ++ +G PDVI
Sbjct: 91 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150
Query: 478 -----SYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAIN 314
+YN L+ + DD +++ M S + P+ VTY+I+I +LC G+LD A+
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210
Query: 313 LLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALC 134
+L +L + P TY LI A EG +D A+ LD M+S G PD+ YNTI+ +C
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270
Query: 133 KNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHG 20
K G D A E+ L GC PDV +YN ++ AL N G
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQG 308
Score = 79.0 bits (193), Expect = 2e-12
Identities = 38/101 (37%), Positives = 61/101 (60%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD YN+ IS LC+ +D A ++L MR+ F P VVTYNI++ C +++ A
Sbjct: 466 DPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAID 525
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEML 611
+LD ++ + C+P TYT+LIE G EAM+L ++++
Sbjct: 526 VLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566
>ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein
[Arabidopsis thaliana] gi|15810359|gb|AAL07067.1| unknown
protein [Arabidopsis thaliana] gi|22136960|gb|AAM91709.1|
unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 476 bits (1225), Expect = e-132
Identities = 221/305 (72%), Positives = 269/305 (88%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
G+PD+FAYNA I+G CKMN+ID A +VL MR++ FSPD VTYNIMIGSLC+RGKLDLA
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
K+L+QL+ DNCQPTVITYTILIEAT+LEGG +EA+KL DEML RGL+PDM+TYNTIIRGM
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
C+EG++D AFE VR+L +GC+PDVISYNILLRALLNQGKW++GEKLM +MFS +C+PNV
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
VTYSILI+ LCRDG+++EA+NLLK+M ++GLTPD Y+YDPLI+A C+EGRLD+AI FL+
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
MIS GC PDIVNYNT+L+ LCKNG AD+ALE+FGKL E GC P+ S+YNTM SALW+ GD
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 16 RSRAL 2
+ RAL
Sbjct: 454 KIRAL 458
Score = 232 bits (592), Expect = 1e-58
Identities = 108/304 (35%), Positives = 176/304 (57%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD+F YN I G+CK +D A +++ ++ +G PDV++YNI++ +L N+GK + +K
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
++ ++ + C P V+TY+ILI +G EAM L M +GL PD Y+Y+ +I C
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
REG +D A EF+ ++ S GC PD+++YN +L L GK D ++ ++ C PN
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
+Y+ + SAL G A++++ M+ G+ PD TY+ +IS LC+EG +D A L M
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDR 14
S P +V YN +L CK ++A+ V + NGC P+ +TY ++ + G R
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR 559
Query: 13 SRAL 2
+ A+
Sbjct: 560 AEAM 563
Score = 166 bits (419), Expect = 1e-38
Identities = 83/255 (32%), Positives = 143/255 (56%)
Frame = -1
Query: 766 CNRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDM 587
C G + +L+ ++ P VI T LI+ +A+++ E+L + QPD+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 586 YTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIE 407
+ YN +I G C+ +D+A + + S+ PD ++YNI++ +L ++GK D K++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 406 MFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGR 227
+ S C+P V+TY+ILI A +G +DEA+ L+ ML GL PD +TY+ +I +CKEG
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 226 LDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNT 47
+D A + + GC PD+++YN +L AL G +E ++ K+ C P+V TY+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 46 MVSALWNHGDRSRAL 2
+++ L G A+
Sbjct: 339 LITTLCRDGKIEEAM 353
Score = 121 bits (304), Expect = 3e-25
Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Frame = -1
Query: 571 IIRGMCREGLMDEAFEFVRSLTSRGCKPDVI----------------------------- 479
I CR G E+ + ++ +G PDVI
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 478 -----SYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAIN 314
+YN L+ + DD +++ M S + P+ VTY+I+I +LC G+LD A+
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 313 LLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALC 134
+L +L + P TY LI A EG +D A+ +D M+S G PD+ YNTI+ +C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 133 KNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHG 20
K G D A E+ L GC PDV +YN ++ AL N G
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 312
Score = 77.8 bits (190), Expect = 5e-12
Identities = 37/101 (36%), Positives = 61/101 (60%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD YN+ IS LC+ +D A ++L MR+ F P VVTYNI++ C +++ A
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 529
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEML 611
+L+ ++ + C+P TYT+LIE G EAM+L ++++
Sbjct: 530 VLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao]
Length = 586
Score = 472 bits (1215), Expect = e-131
Identities = 221/305 (72%), Positives = 268/305 (87%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
GEPD+FAYNA ISG CKMN++D AN+VL MR+RGFSPDVVTYNIMIGS C+RGKLD A
Sbjct: 137 GEPDVFAYNAIISGFCKMNRLDFANKVLDRMRSRGFSPDVVTYNIMIGSFCSRGKLDSAY 196
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
K+++QL++DNC+P+VITYTILIEAT+L+G NEAMKL DEML +GL+PDM+TYN IIRGM
Sbjct: 197 KVINQLLKDNCKPSVITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDMFTYNAIIRGM 256
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
C++G+++ AF+FVRSL +RGC+PDVISYNILLR LLNQGKW +GEKL+ EM S CEPNV
Sbjct: 257 CKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKLVTEMVSRGCEPNV 316
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
VTYSILIS+LCR+G+L+EA+N+LK+M + GLTPD Y+YDPLISA CKEGRLDLAI FLD
Sbjct: 317 VTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYDPLISAFCKEGRLDLAIEFLDC 376
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
MIS GC PDIVNYNT+L+ LCKNG A++ALE+F KL E GCPP+VS+YNTM SALW+ GD
Sbjct: 377 MISDGCLPDIVNYNTVLATLCKNGKAEQALEIFEKLREVGCPPNVSSYNTMFSALWSSGD 436
Query: 16 RSRAL 2
+ +AL
Sbjct: 437 KVKAL 441
Score = 231 bits (589), Expect = 3e-58
Identities = 112/303 (36%), Positives = 181/303 (59%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PD+F YNA I G+CK ++ A + + S++ARG PDV++YNI++ L N+GK +K+
Sbjct: 244 PDMFTYNAIIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKL 303
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
+ +++ C+P V+TY+ILI + EG EA+ + M RGL PD Y+Y+ +I C+
Sbjct: 304 VTEMVSRGCEPNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYDPLISAFCK 363
Query: 550 EGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVT 371
EG +D A EF+ + S GC PD+++YN +L L GK + ++ ++ C PNV +
Sbjct: 364 EGRLDLAIEFLDCMISDGCLPDIVNYNTVLATLCKNGKAEQALEIFEKLREVGCPPNVSS 423
Query: 370 YSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMI 191
Y+ + SAL G +A+ ++ ML + + PD TY+ LIS LC++G +D AI L M
Sbjct: 424 YNTMFSALWSSGDKVKALEMISEMLSKRIGPDEITYNSLISCLCRDGMVDEAIELLVDMG 483
Query: 190 SSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRS 11
SG P +++YN +L LCK ++A+EV + + C P+ +TY ++ + G RS
Sbjct: 484 CSGIPPTVISYNIVLLGLCKVHRINDAIEVLAAMVDKRCQPNETTYILLIEGIGFAGWRS 543
Query: 10 RAL 2
A+
Sbjct: 544 EAM 546
Score = 194 bits (494), Expect = 3e-47
Identities = 94/294 (31%), Positives = 166/294 (56%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+P + Y I +I+ A ++L M ++G PD+ TYN +I +C G ++ A K
Sbjct: 208 KPSVITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDMFTYNAIIRGMCKDGMVNRAFK 267
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
+ L CQP VI+Y IL+ + +G E KL EM+ RG +P++ TY+ +I +C
Sbjct: 268 FVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKLVTEMVSRGCEPNVVTYSILISSLC 327
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
REG ++EA ++ + RG PD SY+ L+ A +G+ D + + M S C P++V
Sbjct: 328 REGKLEEAVNVLKMMKERGLTPDAYSYDPLISAFCKEGRLDLAIEFLDCMISDGCLPDIV 387
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
Y+ +++ LC++G+ ++A+ + + + + G P+ +Y+ + SAL G A+ + M
Sbjct: 388 NYNTVLATLCKNGKAEQALEIFEKLREVGCPPNVSSYNTMFSALWSSGDKVKALEMISEM 447
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSAL 32
+S PD + YN+++S LC++G DEA+E+ + +G PP V +YN ++ L
Sbjct: 448 LSKRIGPDEITYNSLISCLCRDGMVDEAIELLVDMGCSGIPPTVISYNIVLLGL 501
Score = 169 bits (428), Expect = 1e-39
Identities = 83/260 (31%), Positives = 150/260 (57%)
Frame = -1
Query: 781 MIGSLCNRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRG 602
++ C GK + A L+ ++ +P V+ T +I+ +A ++ E+L +
Sbjct: 78 LLNRSCKAGKYNEAFYFLECMVGKGYKPDVVLCTKMIKGFFNGRNVEKATRVI-EILEKY 136
Query: 601 LQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGE 422
+PD++ YN II G C+ +D A + + + SRG PDV++YNI++ + ++GK D
Sbjct: 137 GEPDVFAYNAIISGFCKMNRLDFANKVLDRMRSRGFSPDVVTYNIMIGSFCSRGKLDSAY 196
Query: 421 KLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISAL 242
K++ ++ C+P+V+TY+ILI A G+++EA+ LL ML +GL PD +TY+ +I +
Sbjct: 197 KVINQLLKDNCKPSVITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDMFTYNAIIRGM 256
Query: 241 CKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDV 62
CK+G ++ A F+ + + GC PD+++YN +L L G E ++ ++ GC P+V
Sbjct: 257 CKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKLVTEMVSRGCEPNV 316
Query: 61 STYNTMVSALWNHGDRSRAL 2
TY+ ++S+L G A+
Sbjct: 317 VTYSILISSLCREGKLEEAV 336
Score = 92.8 bits (229), Expect = 2e-16
Identities = 47/173 (27%), Positives = 91/173 (52%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PDI YN ++ LCK + + A ++ +R G P+V +YN M +L + G A +M
Sbjct: 384 PDIVNYNTVLATLCKNGKAEQALEIFEKLREVGCPPNVSSYNTMFSALWSSGDKVKALEM 443
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
+ +++ P ITY LI +G +EA++L +M G+ P + +YN ++ G+C+
Sbjct: 444 ISEMLSKRIGPDEITYNSLISCLCRDGMVDEAIELLVDMGCSGIPPTVISYNIVLLGLCK 503
Query: 550 EGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTE 392
+++A E + ++ + C+P+ +Y +L+ + G + +L +F E
Sbjct: 504 VHRINDAIEVLAAMVDKRCQPNETTYILLIEGIGFAGWRSEAMELANALFRME 556
>dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 472 bits (1215), Expect = e-131
Identities = 220/305 (72%), Positives = 268/305 (87%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
G+PD+FAYNA I+G CKMN+ID A +VL MR++ FSPD VTYNIMIGSLC+RGKLDLA
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
K+L+QL+ DNCQPTVITYTILIEAT+LEGG +EA+KL DEML RGL+PDM+TYNTIIRGM
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
C+EG++D AFE VR+L +G +PDVISYNILLRALLNQGKW++GEKLM +MFS +C+PNV
Sbjct: 274 CKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
VTYSILI+ LCRDG+++EA+NLLK+M ++GLTPD Y+YDPLI+A C+EGRLD+AI FL+
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
MIS GC PDIVNYNT+L+ LCKNG AD+ALE+FGKL E GC P+ S+YNTM SALW+ GD
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 16 RSRAL 2
+ RAL
Sbjct: 454 KIRAL 458
Score = 232 bits (592), Expect = 1e-58
Identities = 108/304 (35%), Positives = 176/304 (57%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD+F YN I G+CK +D A +++ ++ +G PDV++YNI++ +L N+GK + +K
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEK 319
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
++ ++ + C P V+TY+ILI +G EAM L M +GL PD Y+Y+ +I C
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
REG +D A EF+ ++ S GC PD+++YN +L L GK D ++ ++ C PN
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
+Y+ + SAL G A++++ M+ G+ PD TY+ +IS LC+EG +D A L M
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDR 14
S P +V YN +L CK ++A+ V + NGC P+ +TY ++ + G R
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR 559
Query: 13 SRAL 2
+ A+
Sbjct: 560 AEAM 563
Score = 162 bits (409), Expect = 2e-37
Identities = 82/255 (32%), Positives = 142/255 (55%)
Frame = -1
Query: 766 CNRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDM 587
C G + +L+ ++ P VI T LI+ +A+++ E+L + QPD+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 586 YTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIE 407
+ YN +I G C+ +D+A + + S+ PD ++YNI++ +L ++GK D K++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 406 MFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGR 227
+ S C+P V+TY+ILI A +G +DEA+ L+ ML GL PD +TY+ +I +CKEG
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 226 LDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNT 47
+D A + + G PD+++YN +L AL G +E ++ K+ C P+V TY+
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 46 MVSALWNHGDRSRAL 2
+++ L G A+
Sbjct: 339 LITTLCRDGKIEEAM 353
Score = 117 bits (294), Expect = 5e-24
Identities = 68/218 (31%), Positives = 100/218 (45%), Gaps = 34/218 (15%)
Frame = -1
Query: 571 IIRGMCREGLMDEAFEFVRSLTSRGCKPDVI----------------------------- 479
I CR G E+ + ++ +G PDVI
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 478 -----SYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAIN 314
+YN L+ + DD +++ M S + P+ VTY+I+I +LC G+LD A+
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 313 LLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALC 134
+L +L + P TY LI A EG +D A+ +D M+S G PD+ YNTI+ +C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 133 KNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHG 20
K G D A E+ L G PDV +YN ++ AL N G
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQG 312
Score = 77.8 bits (190), Expect = 5e-12
Identities = 37/101 (36%), Positives = 61/101 (60%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD YN+ IS LC+ +D A ++L MR+ F P VVTYNI++ C +++ A
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 529
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEML 611
+L+ ++ + C+P TYT+LIE G EAM+L ++++
Sbjct: 530 VLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]
Length = 587
Score = 467 bits (1201), Expect = e-129
Identities = 216/305 (70%), Positives = 264/305 (86%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
GEPD+F+YNA ISG CK N+++ AN+VL MR +GFSPD +TYNIMIGSLC+RGK+D+A
Sbjct: 138 GEPDLFSYNAMISGFCKANRVELANKVLDRMRVQGFSPDTITYNIMIGSLCSRGKVDMAF 197
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
K+LD+L+ DNC+P+VITYTILIEATI EGG ++AM++ +EML RGL PDM+TYN I+RGM
Sbjct: 198 KVLDELLRDNCKPSVITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDMFTYNAIVRGM 257
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
CREG++D AFEFVRSL ++GC P+VISYNILLRALLN+GKW DGEK++ +M S CEPNV
Sbjct: 258 CREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSDMVSRGCEPNV 317
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
VTYSILIS LCRDG++++A+N+LK M ++G+TPD Y+YDPLISA CKEGRLDLAI F+DY
Sbjct: 318 VTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGRLDLAIEFMDY 377
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
MIS G PDIVNYNTIL+ALCKNGNAD ALE+F KL E GCPP VS+YNTM SALWN G+
Sbjct: 378 MISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGEVGCPPTVSSYNTMFSALWNCGE 437
Query: 16 RSRAL 2
R +AL
Sbjct: 438 RIKAL 442
Score = 223 bits (567), Expect = 1e-55
Identities = 105/303 (34%), Positives = 178/303 (58%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PD+F YNA + G+C+ +D A + + S+ A+G SP+V++YNI++ +L NRGK +K+
Sbjct: 245 PDMFTYNAIVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKI 304
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
L ++ C+P V+TY+ILI +G +A+ + M +G+ PD Y+Y+ +I C+
Sbjct: 305 LSDMVSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCK 364
Query: 550 EGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVT 371
EG +D A EF+ + S G PD+++YN +L AL G D ++ ++ C P V +
Sbjct: 365 EGRLDLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGEVGCPPTVSS 424
Query: 370 YSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMI 191
Y+ + SAL G+ +A+ ++ M+ + + PD TY+ LIS LC+EG ++ AI L M
Sbjct: 425 YNTMFSALWNCGERIKALEMISEMVSKRINPDEITYNSLISCLCREGMVNEAIGLLIDME 484
Query: 190 SSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRS 11
+ G +++YN +L LCK D+A+E+ + E GC P+ +TY ++ + G R
Sbjct: 485 AGGFKLSVISYNIVLLGLCKARRIDDAIELLAAMVEKGCRPNETTYTLLIEGIGFAGWRV 544
Query: 10 RAL 2
A+
Sbjct: 545 EAM 547
Score = 148 bits (373), Expect = 3e-33
Identities = 74/253 (29%), Positives = 133/253 (52%), Gaps = 34/253 (13%)
Frame = -1
Query: 676 LIEATILEGGTNEAMKLFDEMLLRGL---------------------------------- 599
+I + G NEA+ + M+ +G
Sbjct: 79 VINRSCKSGKYNEALYFLELMVSKGFKPDVILCTKVMRGFFNSRNIPKAIRVMEILEKHG 138
Query: 598 QPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEK 419
+PD+++YN +I G C+ ++ A + + + +G PD I+YNI++ +L ++GK D K
Sbjct: 139 EPDLFSYNAMISGFCKANRVELANKVLDRMRVQGFSPDTITYNIMIGSLCSRGKVDMAFK 198
Query: 418 LMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALC 239
++ E+ C+P+V+TY+ILI A +G +D+A+ +L+ ML GL PD +TY+ ++ +C
Sbjct: 199 VLDELLRDNCKPSVITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDMFTYNAIVRGMC 258
Query: 238 KEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVS 59
+EG LD A F+ + + GC P++++YN +L AL G + ++ + GC P+V
Sbjct: 259 REGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSDMVSRGCEPNVV 318
Query: 58 TYNTMVSALWNHG 20
TY+ ++S L G
Sbjct: 319 TYSILISTLCRDG 331
Score = 144 bits (362), Expect = 6e-32
Identities = 68/224 (30%), Positives = 130/224 (58%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
EP++ Y+ IS LC+ +++ A VL +M+ +G +PD +Y+ +I + C G+LDLA +
Sbjct: 314 EPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGRLDLAIE 373
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
+D +I D P ++ Y ++ A G + A+++F+++ G P + +YNT+ +
Sbjct: 374 FMDYMISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGEVGCPPTVSSYNTMFSALW 433
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
G +A E + + S+ PD I+YN L+ L +G ++ L+I+M + + +V+
Sbjct: 434 NCGERIKALEMISEMVSKRINPDEITYNSLISCLCREGMVNEAIGLLIDMEAGGFKLSVI 493
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISAL 242
+Y+I++ LC+ ++D+AI LL M+++G P+ TY LI +
Sbjct: 494 SYNIVLLGLCKARRIDDAIELLAAMVEKGCRPNETTYTLLIEGI 537
Score = 136 bits (343), Expect = 1e-29
Identities = 71/206 (34%), Positives = 115/206 (55%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PD ++Y+ IS CK ++D A + + M + G PD+V YN ++ +LC G D A ++
Sbjct: 350 PDAYSYDPLISAFCKEGRLDLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEI 409
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
++L E C PTV +Y + A G +A+++ EM+ + + PD TYN++I +CR
Sbjct: 410 FEKLGEVGCPPTVSSYNTMFSALWNCGERIKALEMISEMVSKRINPDEITYNSLISCLCR 469
Query: 550 EGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVT 371
EG+++EA + + + G K VISYNI+L L + DD +L+ M C PN T
Sbjct: 470 EGMVNEAIGLLIDMEAGGFKLSVISYNIVLLGLCKARRIDDAIELLAAMVEKGCRPNETT 529
Query: 370 YSILISALCRDGQLDEAINLLKVMLD 293
Y++LI + G EA+ L ++ D
Sbjct: 530 YTLLIEGIGFAGWRVEAMGLANLLFD 555
Score = 119 bits (299), Expect = 1e-24
Identities = 59/189 (31%), Positives = 101/189 (53%)
Frame = -1
Query: 571 IIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTE 392
+I C+ G +EA F+ + S+G KPDVI ++R N ++M E+
Sbjct: 79 VINRSCKSGKYNEALYFLELMVSKGFKPDVILCTKVMRGFFNSRNIPKAIRVM-EILEKH 137
Query: 391 CEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAI 212
EP++ +Y+ +IS C+ +++ A +L M +G +PDT TY+ +I +LC G++D+A
Sbjct: 138 GEPDLFSYNAMISGFCKANRVELANKVLDRMRVQGFSPDTITYNIMIGSLCSRGKVDMAF 197
Query: 211 SFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSAL 32
LD ++ C P ++ Y ++ A G D+A+EV ++ G PD+ TYN +V +
Sbjct: 198 KVLDELLRDNCKPSVITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDMFTYNAIVRGM 257
Query: 31 WNHGDRSRA 5
G RA
Sbjct: 258 CREGMLDRA 266
Score = 83.6 bits (205), Expect = 1e-13
Identities = 42/147 (28%), Positives = 77/147 (52%)
Frame = -1
Query: 442 GKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTY 263
GK+++ + M S +P+V+ + ++ + +AI +++++ G PD ++Y
Sbjct: 87 GKYNEALYFLELMVSKGFKPDVILCTKVMRGFFNSRNIPKAIRVMEILEKHG-EPDLFSY 145
Query: 262 DPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAE 83
+ +IS CK R++LA LD M G PD + YN ++ +LC G D A +V +L
Sbjct: 146 NAMISGFCKANRVELANKVLDRMRVQGFSPDTITYNIMIGSLCSRGKVDMAFKVLDELLR 205
Query: 82 NGCPPDVSTYNTMVSALWNHGDRSRAL 2
+ C P V TY ++ A + G +A+
Sbjct: 206 DNCKPSVITYTILIEATISEGGVDKAM 232
>ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 586
Score = 466 bits (1198), Expect = e-129
Identities = 217/305 (71%), Positives = 262/305 (85%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
GEPD+FAYNA ISG CK N+I+SAN+VL M+++GF PDVVTYNIMIGSLC+RGKL LA
Sbjct: 137 GEPDLFAYNALISGFCKANRIESANKVLDRMKSQGFKPDVVTYNIMIGSLCSRGKLGLAL 196
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
+++D+L+ DNC+PTVITYTILIEA IL+GG NEAMKL DEML RGL+PDMYTYN I+RGM
Sbjct: 197 QVMDRLVRDNCKPTVITYTILIEAIILDGGINEAMKLLDEMLSRGLKPDMYTYNAIVRGM 256
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
CREG++D AFEFV+ ++GC P+VISYNILLRALLN+GKW++GE L+ M + CEPNV
Sbjct: 257 CREGMLDRAFEFVKCFDAKGCAPNVISYNILLRALLNRGKWEEGENLVANMCARGCEPNV 316
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
VTYSILIS LCRDG++++ +N+LK+M ++GLTPD Y+YDPLIS CKEGRLDLAI LD
Sbjct: 317 VTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPDAYSYDPLISCFCKEGRLDLAIELLDC 376
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
MIS GC PDIVNYNT+L+ALCKNG+AD+ALE+F L E GCPP+VS+YNTM SALWN GD
Sbjct: 377 MISDGCLPDIVNYNTVLAALCKNGSADQALEIFENLGEVGCPPNVSSYNTMFSALWNCGD 436
Query: 16 RSRAL 2
R RAL
Sbjct: 437 RVRAL 441
Score = 214 bits (545), Expect = 4e-53
Identities = 103/304 (33%), Positives = 174/304 (57%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
+PD++ YNA + G+C+ +D A + + A+G +P+V++YNI++ +L NRGK + +
Sbjct: 243 KPDMYTYNAIVRGMCREGMLDRAFEFVKCFDAKGCAPNVISYNILLRALLNRGKWEEGEN 302
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
++ + C+P V+TY+ILI +G + M + M +GL PD Y+Y+ +I C
Sbjct: 303 LVANMCARGCEPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPDAYSYDPLISCFC 362
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
+EG +D A E + + S GC PD+++YN +L AL G D ++ + C PNV
Sbjct: 363 KEGRLDLAIELLDCMISDGCLPDIVNYNTVLAALCKNGSADQALEIFENLGEVGCPPNVS 422
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
+Y+ + SAL G A+ ++ M+ +G+ PD TY+ LIS LC++G ++ AI L M
Sbjct: 423 SYNTMFSALWNCGDRVRALGMVSDMVSKGIEPDEITYNSLISCLCRDGMVNEAIGLLVDM 482
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDR 14
+ G P ++ YN +L L K +A+EVF + E GC P+ +TY ++ + G R
Sbjct: 483 EAGGFQPTVITYNIVLLGLSKARRIVDAIEVFTAMVEKGCRPNETTYILLIEGIGFAGWR 542
Query: 13 SRAL 2
+ A+
Sbjct: 543 AEAM 546
Score = 129 bits (323), Expect = 2e-27
Identities = 75/275 (27%), Positives = 131/275 (47%), Gaps = 37/275 (13%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
EP++ Y+ IS LC+ +++ VL M+ +G +PD +Y+ +I C G+LDLA +
Sbjct: 313 EPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPDAYSYDPLISCFCKEGRLDLAIE 372
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFD---------------------- 620
+LD +I D C P ++ Y ++ A G ++A+++F+
Sbjct: 373 LLDCMISDGCLPDIVNYNTVLAALCKNGSADQALEIFENLGEVGCPPNVSSYNTMFSALW 432
Query: 619 -------------EMLLRGLQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVI 479
+M+ +G++PD TYN++I +CR+G+++EA + + + G +P VI
Sbjct: 433 NCGDRVRALGMVSDMVSKGIEPDEITYNSLISCLCRDGMVNEAIGLLVDMEAGGFQPTVI 492
Query: 478 SYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVM 299
+YNI+L L + D ++ M C PN TY +LI + G EA+ L K +
Sbjct: 493 TYNIVLLGLSKARRIVDAIEVFTAMVEKGCRPNETTYILLIEGIGFAGWRAEAMELAKSV 552
Query: 298 LDEGLTPDTYTYDPLISALCKEG--RLDLAISFLD 200
+SA+C++ RL LD
Sbjct: 553 YS-------------LSAICEDSFKRLSRTFPMLD 574
Score = 84.3 bits (207), Expect = 6e-14
Identities = 44/147 (29%), Positives = 78/147 (53%)
Frame = -1
Query: 442 GKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTY 263
G++++ + M + +P+V+ + LI +++AI +++++ G PD + Y
Sbjct: 86 GQYNEAIYFLELMVNKGYKPDVILCTKLIKGFFNSRNIEKAIRVMQILEQYG-EPDLFAY 144
Query: 262 DPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAE 83
+ LIS CK R++ A LD M S G PD+V YN ++ +LC G AL+V +L
Sbjct: 145 NALISGFCKANRIESANKVLDRMKSQGFKPDVVTYNIMIGSLCSRGKLGLALQVMDRLVR 204
Query: 82 NGCPPDVSTYNTMVSALWNHGDRSRAL 2
+ C P V TY ++ A+ G + A+
Sbjct: 205 DNCKPTVITYTILIEAIILDGGINEAM 231
>ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Citrus sinensis]
Length = 583
Score = 461 bits (1187), Expect = e-127
Identities = 217/305 (71%), Positives = 264/305 (86%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
GEPD+FAYNA ISG CK NQI+ AN+VL +R+RGFSPDVVTYNIMIGSLC+RG ++ A
Sbjct: 134 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAF 193
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
K+ DQL+ DNC+PTVITYTILI+AT+LEG T++AMKL DEML RGL PDM+T N IIRGM
Sbjct: 194 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMLARGLIPDMFTNNAIIRGM 253
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
C++G++ +AF+FVRSL SRGC+PDVISYN+LLR LLN GKW++GEKLM EM S EPNV
Sbjct: 254 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 313
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
VTYSILIS+LCRDG+ ++A+++L+ ++GLTPD Y+YDPLISA CK+GRLDLAI FLDY
Sbjct: 314 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 373
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
MIS GC PDIVNYNTIL+A CKNGNAD+ALE+F KL++ GCPP+VS+YNTM SALW+ GD
Sbjct: 374 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 433
Query: 16 RSRAL 2
+ RAL
Sbjct: 434 KIRAL 438
Score = 223 bits (567), Expect = 1e-55
Identities = 105/303 (34%), Positives = 177/303 (58%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PD+F NA I G+CK + A Q + S+ +RG PDV++YN+++ +L N GK + +K+
Sbjct: 241 PDMFTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 300
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
+ ++I +P V+TY+ILI + +G T +A+ + +GL PD Y+Y+ +I C+
Sbjct: 301 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 360
Query: 550 EGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVT 371
+G +D A EF+ + S GC PD+++YN +L A G D ++ ++ C PNV +
Sbjct: 361 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 420
Query: 370 YSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMI 191
Y+ + SAL G A+ ++ ML +G+ PD TY+ LIS LC++G +D A+ L M
Sbjct: 421 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 480
Query: 190 SSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRS 11
S+ P +++YN I+ CK +E++EV + E GC P+ +TY ++ + G R+
Sbjct: 481 STRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 540
Query: 10 RAL 2
A+
Sbjct: 541 EAM 543
Score = 166 bits (420), Expect = 1e-38
Identities = 83/252 (32%), Positives = 148/252 (58%)
Frame = -1
Query: 757 GKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTY 578
GK D + ++ ++ + C+P V+ T LI+ E +N+A+++ E+L + +PD++ Y
Sbjct: 83 GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 141
Query: 577 NTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFS 398
N +I G C+ ++ A + + L SRG PDV++YNI++ +L ++G + K+ ++
Sbjct: 142 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLR 201
Query: 397 TECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDL 218
C+P V+TY+ILI A +GQ D+A+ LL ML GL PD +T + +I +CK+G +
Sbjct: 202 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMLARGLIPDMFTNNAIIRGMCKKGMVGQ 261
Query: 217 AISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVS 38
A F+ + S GC PD+++YN +L L G +E ++ ++ G P+V TY+ ++S
Sbjct: 262 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 321
Query: 37 ALWNHGDRSRAL 2
+L G A+
Sbjct: 322 SLCRDGKTEDAV 333
Score = 151 bits (381), Expect = 4e-34
Identities = 73/242 (30%), Positives = 135/242 (55%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
EP++ Y+ IS LC+ + + A VL + + +G +PD +Y+ +I + C G+LDLA +
Sbjct: 310 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 369
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
LD +I D C P ++ Y ++ A G ++A+++F+++ G P++ +YNT+ +
Sbjct: 370 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 429
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
G A + + S+G +PD I+YN L+ L G D+ L+++M ST P V+
Sbjct: 430 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVI 489
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
+Y+I+I C+ +++E+I +L M ++G P+ TY LI + G A+ + +
Sbjct: 490 SYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 549
Query: 193 IS 188
+S
Sbjct: 550 VS 551
Score = 111 bits (278), Expect = 3e-22
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Frame = -1
Query: 571 IIRGMCREGLMDEAFEFVRSLTSRGCKPDVI----------------------------- 479
+I+ R G DE+ F+ S+ + GCKPDV+
Sbjct: 75 LIKKSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 134
Query: 478 -----SYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAIN 314
+YN L+ + + K++ + S P+VVTY+I+I +LC G ++ A
Sbjct: 135 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFK 194
Query: 313 LLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALC 134
+ +L + P TY LI A EG+ D A+ LD M++ G PD+ N I+ +C
Sbjct: 195 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMLARGLIPDMFTNNAIIRGMC 254
Query: 133 KNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHG 20
K G +A + L GC PDV +YN ++ L N G
Sbjct: 255 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 292
>ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citrus clementina]
gi|557544927|gb|ESR55905.1| hypothetical protein
CICLE_v10019446mg [Citrus clementina]
Length = 583
Score = 458 bits (1179), Expect = e-126
Identities = 215/305 (70%), Positives = 262/305 (85%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
GEPD+FAYNA ISG CK NQI+ AN+VL +R+RGFSPDVVTYNIMIGSLC+RG ++
Sbjct: 134 GEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESGF 193
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
K+ DQL+ DNC+PTVITYTILI+AT+LEG T++AMKL DEM RGL PDM+T N IIRGM
Sbjct: 194 KVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMFARGLIPDMFTNNAIIRGM 253
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
C++G++ +AF+FVRSL SRGC+PDVISYN+LLR LLN GKW++GEKLM EM S EPNV
Sbjct: 254 CKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNV 313
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
VTYSILIS+LCRDG+ ++A+++L+ ++GLTPD Y+YDPLISA CK+GRLDLAI FLDY
Sbjct: 314 VTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDY 373
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
MIS GC PDIVNYNTIL+A CKNGNAD+ALE+F KL++ GCPP+VS+YNTM SALW+ GD
Sbjct: 374 MISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGD 433
Query: 16 RSRAL 2
+ RAL
Sbjct: 434 KIRAL 438
Score = 224 bits (571), Expect = 4e-56
Identities = 107/303 (35%), Positives = 177/303 (58%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PD+F NA I G+CK + A Q + S+ +RG PDV++YN+++ +L N GK + +K+
Sbjct: 241 PDMFTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 300
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
+ ++I +P V+TY+ILI + +G T +A+ + +GL PD Y+Y+ +I C+
Sbjct: 301 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 360
Query: 550 EGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVT 371
+G +D A EF+ + S GC PD+++YN +L A G D ++ ++ C PNV +
Sbjct: 361 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 420
Query: 370 YSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMI 191
Y+ + SAL G A+ ++ ML +G+ PD TY+ LIS LC++G +D A+ L M
Sbjct: 421 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDME 480
Query: 190 SSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRS 11
S+ P +V+YN I+ CK +EA+EV + E GC P+ +TY ++ + G R+
Sbjct: 481 STRFRPTVVSYNIIILGFCKTRRINEAIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRA 540
Query: 10 RAL 2
A+
Sbjct: 541 EAM 543
Score = 167 bits (422), Expect = 7e-39
Identities = 83/252 (32%), Positives = 148/252 (58%)
Frame = -1
Query: 757 GKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTY 578
GK D + ++ ++ + C+P V+ T LI+ E +N+A+++ E+L + +PD++ Y
Sbjct: 83 GKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVM-EILEKYGEPDVFAY 141
Query: 577 NTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFS 398
N +I G C+ ++ A + + L SRG PDV++YNI++ +L ++G + G K+ ++
Sbjct: 142 NALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESGFKVFDQLLR 201
Query: 397 TECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDL 218
C+P V+TY+ILI A +GQ D+A+ LL M GL PD +T + +I +CK+G +
Sbjct: 202 DNCKPTVITYTILIQATMLEGQTDKAMKLLDEMFARGLIPDMFTNNAIIRGMCKKGMVGQ 261
Query: 217 AISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVS 38
A F+ + S GC PD+++YN +L L G +E ++ ++ G P+V TY+ ++S
Sbjct: 262 AFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILIS 321
Query: 37 ALWNHGDRSRAL 2
+L G A+
Sbjct: 322 SLCRDGKTEDAV 333
Score = 152 bits (385), Expect = 1e-34
Identities = 75/242 (30%), Positives = 135/242 (55%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
EP++ Y+ IS LC+ + + A VL + + +G +PD +Y+ +I + C G+LDLA +
Sbjct: 310 EPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIE 369
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
LD +I D C P ++ Y ++ A G ++A+++F+++ G P++ +YNT+ +
Sbjct: 370 FLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALW 429
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
G A + + S+G +PD I+YN L+ L G D+ L+++M ST P VV
Sbjct: 430 SSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVV 489
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
+Y+I+I C+ +++EAI +L M ++G P+ TY LI + G A+ + +
Sbjct: 490 SYNIIILGFCKTRRINEAIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAMELANAL 549
Query: 193 IS 188
+S
Sbjct: 550 VS 551
Score = 109 bits (272), Expect = 2e-21
Identities = 62/218 (28%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Frame = -1
Query: 571 IIRGMCREGLMDEAFEFVRSLTSRGCKPDVI----------------------------- 479
+I+ R G DE+ F+ S+ + GCKPDV+
Sbjct: 75 LIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYG 134
Query: 478 -----SYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAIN 314
+YN L+ + + K++ + S P+VVTY+I+I +LC G ++
Sbjct: 135 EPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESGFK 194
Query: 313 LLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALC 134
+ +L + P TY LI A EG+ D A+ LD M + G PD+ N I+ +C
Sbjct: 195 VFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMFARGLIPDMFTNNAIIRGMC 254
Query: 133 KNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHG 20
K G +A + L GC PDV +YN ++ L N G
Sbjct: 255 KKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMG 292
>ref|XP_006375855.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550324943|gb|ERP53652.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 479
Score = 456 bits (1173), Expect = e-126
Identities = 214/306 (69%), Positives = 263/306 (85%), Gaps = 1/306 (0%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
G+PD+FAYNA ISG CK N+I+SA VL M+ +GFSPDVVT+NIMIG+ C +GK+DLA
Sbjct: 40 GKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLAL 99
Query: 736 KMLDQLIEDN-CQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRG 560
K+ ++L++DN C+PT+ITYTILIEA ILEGG +EA+KL DEML RGL+PD +TYN I RG
Sbjct: 100 KVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRG 159
Query: 559 MCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPN 380
+C+EG +D AFEFVR+L SRGCKPDVI+YNILLRALLNQGKWD+GEK M E+FS CEPN
Sbjct: 160 LCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPN 219
Query: 379 VVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLD 200
VVTYSILIS+LCRDG+++E++NL+KVM ++GLTPD Y YDPLI+A C+EG+LD+AI FLD
Sbjct: 220 VVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLD 279
Query: 199 YMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHG 20
MI G PDIVNYNTI++ALCKNGN D A+E+FGKL E GCPP+VS+YNTM+SALW+ G
Sbjct: 280 CMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSG 339
Query: 19 DRSRAL 2
DR RAL
Sbjct: 340 DRYRAL 345
Score = 238 bits (607), Expect = 2e-60
Identities = 112/294 (38%), Positives = 175/294 (59%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
EPD F YN GLCK ++D A + + ++ +RG PDV+TYNI++ +L N+GK D +K
Sbjct: 147 EPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEK 206
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
+ ++ C+P V+TY+ILI + +G E++ L M +GL PD Y Y+ +I C
Sbjct: 207 WMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFC 266
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
REG +D A EF+ + G PD+++YN ++ AL G D ++ ++ C PNV
Sbjct: 267 REGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVS 326
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
+Y+ ++SAL G A+ ++ ML +G+ PD TY+ LIS LC++G +D AI L M
Sbjct: 327 SYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADM 386
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSAL 32
+S P+IV+Y T+L LCK D+A+EV + ENGC P+ +TY ++ +
Sbjct: 387 LSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGI 440
Score = 127 bits (319), Expect = 6e-27
Identities = 75/235 (31%), Positives = 114/235 (48%), Gaps = 36/235 (15%)
Frame = -1
Query: 616 MLLRGLQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISY------------ 473
M+ + QPD+ +I+G +D+A + L G KPDV +Y
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59
Query: 472 -----------------------NILLRALLNQGKWDDGEKLMIEMF-STECEPNVVTYS 365
NI++ +GK D K+ E+ C+P ++TY+
Sbjct: 60 IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119
Query: 364 ILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISS 185
ILI A +G +DEA+ LL ML GL PDT+TY+ + LCKEG++D A F+ + S
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179
Query: 184 GCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHG 20
GC PD++ YN +L AL G DE + ++ GC P+V TY+ ++S+L G
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDG 234
Score = 77.4 bits (189), Expect = 7e-12
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
Frame = -1
Query: 406 MFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGR 227
M + + +P+V+ + LI +D+A ++ ++ G PD + Y+ +IS CK R
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59
Query: 226 LDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGK-LAENGCPPDVSTYN 50
++ A + LD M G PD+V +N ++ C G D AL+VF + L +N C P + TY
Sbjct: 60 IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119
Query: 49 TMVSALWNHGDRSRAL 2
++ A G AL
Sbjct: 120 ILIEAYILEGGIDEAL 135
>ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Populus trichocarpa]
gi|550316702|gb|ERP48891.1| hypothetical protein
POPTR_0019s03630g [Populus trichocarpa]
Length = 586
Score = 453 bits (1166), Expect = e-125
Identities = 213/306 (69%), Positives = 265/306 (86%), Gaps = 1/306 (0%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
GEPD+FAYNA ISG CK N+I+SA +VL M+ +GFS DVVTYNIMIG+ C++GK+DLA
Sbjct: 138 GEPDVFAYNAVISGFCKANRIESAKKVLDRMKRKGFSQDVVTYNIMIGTFCSKGKIDLAL 197
Query: 736 KMLDQLIEDN-CQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRG 560
K+ ++L++DN C+PT+ITYTILIEA ILEGG +E +KL DEML RGL+PD +TYN I+RG
Sbjct: 198 KVFEELLKDNNCKPTLITYTILIEAHILEGGIDEGLKLLDEMLSRGLEPDTFTYNVIVRG 257
Query: 559 MCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPN 380
+ +EG +++AFE VR+L SRGCKPDVI+YNILLRALL+QGKW +GEKLM EMFS CEPN
Sbjct: 258 LGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKWYEGEKLMDEMFSRGCEPN 317
Query: 379 VVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLD 200
VVTYSILIS+LCRDG+++E++NL+KVM ++GLTPD Y YDPLI+A C+EG+LD+AI FLD
Sbjct: 318 VVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIKFLD 377
Query: 199 YMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHG 20
YMIS G PDIVNYNTI++ALCKNGN+D A+E+FGKL E GCPP+VS+YNTM+SALW G
Sbjct: 378 YMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKLEEVGCPPNVSSYNTMLSALWGSG 437
Query: 19 DRSRAL 2
DR RAL
Sbjct: 438 DRYRAL 443
Score = 234 bits (596), Expect = 4e-59
Identities = 112/304 (36%), Positives = 183/304 (60%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
EPD F YN + GL K +++ A +++ ++ +RG PDV+TYNI++ +L ++GK +K
Sbjct: 245 EPDTFTYNVIVRGLGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKWYEGEK 304
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
++D++ C+P V+TY+ILI + +G E++ L M +GL PD Y Y+ +I C
Sbjct: 305 LMDEMFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFC 364
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
REG +D A +F+ + S G PD+++YN ++ AL G D ++ ++ C PNV
Sbjct: 365 REGKLDMAIKFLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKLEEVGCPPNVS 424
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
+Y+ ++SAL G A+ ++ ML G+ PD TY+ LIS LC++G +D AI L M
Sbjct: 425 SYNTMLSALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDGMVDEAIGLLADM 484
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDR 14
+S P+IV+YN +L LCK D+A+EV + ENGC P+ +TY ++ + G R
Sbjct: 485 LSGRFQPNIVSYNIVLLGLCKVHRIDDAIEVLTAMIENGCQPNETTYTLLIEGIGFSGSR 544
Query: 13 SRAL 2
++A+
Sbjct: 545 AQAM 548
Score = 154 bits (390), Expect = 3e-35
Identities = 81/255 (31%), Positives = 141/255 (55%), Gaps = 1/255 (0%)
Frame = -1
Query: 781 MIGSLCNRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRG 602
++ C GK + + L+ ++ QP VI T LI+ +A ++ E+L +
Sbjct: 79 LLNRSCKAGKCNESLYFLECMVAKGYQPDVIMCTKLIKGFFNSRNIEKATRVM-EILEKH 137
Query: 601 LQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGE 422
+PD++ YN +I G C+ ++ A + + + +G DV++YNI++ ++GK D
Sbjct: 138 GEPDVFAYNAVISGFCKANRIESAKKVLDRMKRKGFSQDVVTYNIMIGTFCSKGKIDLAL 197
Query: 421 KLMIEMF-STECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISA 245
K+ E+ C+P ++TY+ILI A +G +DE + LL ML GL PDT+TY+ ++
Sbjct: 198 KVFEELLKDNNCKPTLITYTILIEAHILEGGIDEGLKLLDEMLSRGLEPDTFTYNVIVRG 257
Query: 244 LCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPD 65
L KEG+++ A + + S GC PD++ YN +L AL G E ++ ++ GC P+
Sbjct: 258 LGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKWYEGEKLMDEMFSRGCEPN 317
Query: 64 VSTYNTMVSALWNHG 20
V TY+ ++S+L G
Sbjct: 318 VVTYSILISSLCRDG 332
Score = 147 bits (372), Expect = 4e-33
Identities = 73/242 (30%), Positives = 132/242 (54%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
EP++ Y+ IS LC+ +I+ + ++ M+ +G +PD Y+ +I + C GKLD+A K
Sbjct: 315 EPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIK 374
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
LD +I D P ++ Y ++ A G ++ A+++F ++ G P++ +YNT++ +
Sbjct: 375 FLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKLEEVGCPPNVSSYNTMLSALW 434
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
G A + + S G PD I+YN L+ L G D+ L+ +M S +PN+V
Sbjct: 435 GSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIV 494
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
+Y+I++ LC+ ++D+AI +L M++ G P+ TY LI + G A+ + +
Sbjct: 495 SYNIVLLGLCKVHRIDDAIEVLTAMIENGCQPNETTYTLLIEGIGFSGSRAQAMELANSL 554
Query: 193 IS 188
S
Sbjct: 555 YS 556
Score = 75.9 bits (185), Expect = 2e-11
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Frame = -1
Query: 484 VISYNIL---LRALLNQ----GKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLD 326
V+SY+ L LLN+ GK ++ + M + +P+V+ + LI ++
Sbjct: 66 VLSYDFKETHLMKLLNRSCKAGKCNESLYFLECMVAKGYQPDVIMCTKLIKGFFNSRNIE 125
Query: 325 EAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTIL 146
+A +++++ G PD + Y+ +IS CK R++ A LD M G D+V YN ++
Sbjct: 126 KATRVMEILEKHG-EPDVFAYNAVISGFCKANRIESAKKVLDRMKRKGFSQDVVTYNIMI 184
Query: 145 SALCKNGNADEALEVFGK-LAENGCPPDVSTYNTMVSA 35
C G D AL+VF + L +N C P + TY ++ A
Sbjct: 185 GTFCSKGKIDLALKVFEELLKDNNCKPTLITYTILIEA 222
>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 584
Score = 443 bits (1139), Expect = e-122
Identities = 206/305 (67%), Positives = 258/305 (84%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
G+PD+FAYNA ISG K NQ+++AN+VL M++RGF PDVVTYNIMIGS C+RGKLDLA
Sbjct: 134 GKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
++ ++L++DNC+PTVITYTILIEATIL+GG + AMKL DEML +GL+PD TYN IIRGM
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
C+E ++D+AFE +RSL+SRGCKPD+I+YNILLR LL++GKW +GEKL+ EM S C+PNV
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
VT+SILI LCRDG+++EA+NLL+ M ++GL PD Y YDPLI+ C+EGRLDLA FL+Y
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
MIS GC PDIVNYNTI++ LC+ G AD+ALEVF KL E GCPP+VS+YNT+ SALW+ GD
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433
Query: 16 RSRAL 2
R RAL
Sbjct: 434 RYRAL 438
Score = 243 bits (620), Expect = 7e-62
Identities = 118/304 (38%), Positives = 184/304 (60%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
EPD YNA I G+CK +D A ++L S+ +RG PD++TYNI++ +L +RGK +K
Sbjct: 240 EPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEK 299
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
++ ++I C+P V+T++ILI +G EA+ L M +GL+PD Y Y+ +I G C
Sbjct: 300 LISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFC 359
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
REG +D A EF+ + S GC PD+++YN ++ L GK D ++ ++ C PNV
Sbjct: 360 REGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVS 419
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 194
+Y+ L SAL G A+ ++ +L++G+ PD TY+ LIS LC++G +D AI L M
Sbjct: 420 SYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDM 479
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDR 14
S P++V+YN IL LCK A++A+EV + E GC P+ +TY ++ + G R
Sbjct: 480 QSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLR 539
Query: 13 SRAL 2
+ A+
Sbjct: 540 AEAM 543
Score = 161 bits (408), Expect = 3e-37
Identities = 92/301 (30%), Positives = 155/301 (51%), Gaps = 11/301 (3%)
Frame = -1
Query: 871 CKMNQIDSANQVLSSMRARGFSPDVVTYNI-----------MIGSLCNRGKLDLAKKMLD 725
C +++ AN+V + + R + T+ + ++ C GK + + L+
Sbjct: 34 CIRPELNDANKVRNPQKVRVSAETRQTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLE 93
Query: 724 QLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREG 545
+++ P VI T LI+ +A ++ E+L R +PD++ YN +I G +
Sbjct: 94 CMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERYGKPDVFAYNALISGFIKAN 152
Query: 544 LMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYS 365
++ A + + SRG PDV++YNI++ + ++GK D ++ E+ CEP V+TY+
Sbjct: 153 QLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYT 212
Query: 364 ILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISS 185
ILI A DG +D A+ LL ML +GL PDT TY+ +I +CKE +D A L + S
Sbjct: 213 ILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSR 272
Query: 184 GCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRA 5
GC PDI+ YN +L L G E ++ ++ GC P+V T++ ++ L G A
Sbjct: 273 GCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEA 332
Query: 4 L 2
+
Sbjct: 333 V 333
>ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 437 bits (1124), Expect = e-120
Identities = 204/305 (66%), Positives = 260/305 (85%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
G+PD+++YNA ISG K NQIDSANQV MR+RGFSPDVVTYNIMIGSLC+RGKL+LA
Sbjct: 127 GDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
+++D+L++D C+P+VITYTILIEATILEG NEA++LFDE++ RGL+PD+YTYN IIRG+
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
C+EG+ D A +FVR L++RGC PDV+SYNILLR+ LN+ +W+DGE+LM +M + CEPNV
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
VT+SILIS+ CR+G++ EA+N+L+VM ++GLTPD+Y+YDPLISA CKEGRLDLAI +L+
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEK 366
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
M+S GC PDIVNYNTIL+ LCK G AD AL+VF KL E GCPP V YNTM SALW+ G+
Sbjct: 367 MVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGN 426
Query: 16 RSRAL 2
+ +AL
Sbjct: 427 KIKAL 431
Score = 207 bits (526), Expect = 6e-51
Identities = 100/303 (33%), Positives = 174/303 (57%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PD++ YNA I G+CK D A + + ARG +PDVV+YNI++ S N+ + + +++
Sbjct: 234 PDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERL 293
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
+ ++ C+P V+T++ILI + EG EA+ + + M +GL PD Y+Y+ +I C+
Sbjct: 294 MKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCK 353
Query: 550 EGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVT 371
EG +D A E++ + S GC PD+++YN +L L G D + ++ C P V
Sbjct: 354 EGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRA 413
Query: 370 YSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMI 191
Y+ + SAL G +A+ ++ M+ +G+ PD TY+ LIS LC++G +D AI L M
Sbjct: 414 YNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDME 473
Query: 190 SSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRS 11
++ P ++++N +L +CK E +E+ + E GC P+ ++Y ++ + G R+
Sbjct: 474 ATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRA 533
Query: 10 RAL 2
A+
Sbjct: 534 EAM 536
Score = 141 bits (355), Expect = 4e-31
Identities = 71/253 (28%), Positives = 132/253 (52%), Gaps = 34/253 (13%)
Frame = -1
Query: 676 LIEATILEGGTNEAMKLFDEMLLRGLQ--------------------------------- 596
L+ + G NE++ + ++ +G +
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127
Query: 595 -PDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEK 419
PD+Y+YN +I G + +D A + + SRG PDV++YNI++ +L ++GK + +
Sbjct: 128 DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFE 187
Query: 418 LMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALC 239
+M E+ C+P+V+TY+ILI A +G+++EA+ L ++ GL PD YTY+ +I +C
Sbjct: 188 VMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGIC 247
Query: 238 KEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVS 59
KEG D A+ F+ ++ + GC PD+V+YN +L + ++ + + +GC P+V
Sbjct: 248 KEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVV 307
Query: 58 TYNTMVSALWNHG 20
T++ ++S+ G
Sbjct: 308 THSILISSFCREG 320
Score = 134 bits (337), Expect = 5e-29
Identities = 69/248 (27%), Positives = 133/248 (53%), Gaps = 4/248 (1%)
Frame = -1
Query: 913 EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 734
EP++ ++ IS C+ ++ A VL M+ +G +PD +Y+ +I + C G+LDLA +
Sbjct: 303 EPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIE 362
Query: 733 MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 554
L++++ D C P ++ Y ++ G + A+ +F+++ G P + YNT+ +
Sbjct: 363 YLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALW 422
Query: 553 REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
G +A E + + +G PD I+YN L+ L G D+ L+++M +T +P V+
Sbjct: 423 SCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVI 482
Query: 373 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEG----RLDLAISF 206
+++I++ +C+ ++ E I LL M+++G P+ +Y LI + G ++LA S
Sbjct: 483 SFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSL 542
Query: 205 LDYMISSG 182
+ SG
Sbjct: 543 YRLGVISG 550
Score = 125 bits (315), Expect = 2e-26
Identities = 61/190 (32%), Positives = 102/190 (53%)
Frame = -1
Query: 571 IIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTE 392
++ CR G +E+ F+ S+ S+G KPDV+ L++ N ++M E+ T
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM-EILETY 126
Query: 391 CEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAI 212
+P+V +Y+ +IS + Q+D A + M G +PD TY+ +I +LC G+L+LA
Sbjct: 127 GDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 211 SFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSAL 32
+D ++ GC P ++ Y ++ A G +EALE+F +L G PD+ TYN ++ +
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
Query: 31 WNHGDRSRAL 2
G RAL
Sbjct: 247 CKEGMEDRAL 256
>ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 590
Score = 423 bits (1087), Expect = e-116
Identities = 195/305 (63%), Positives = 249/305 (81%)
Frame = -1
Query: 916 GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 737
G+PD+FAYNA ISG CK +++D A++VL M+ RGF PDVVTYNI+IG+ C RG+LDLA
Sbjct: 142 GKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLAL 201
Query: 736 KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 557
+++DQL++DNC+PTVITYTILIEATI +GG +EAMKL DEML RGL+PD YTYN ++ GM
Sbjct: 202 RVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGM 261
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
C+EG++D AFEF+ ++ GC V +YNILLR LLN+GKW+ GEKLM +M CEPN
Sbjct: 262 CKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNP 321
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
+TYS LI+ALCRDG++DEA N+LKVM ++ L PD Y+YDPLISALC+EG++DLAI FLD
Sbjct: 322 ITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDD 381
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
MIS G PDI++YN+IL++LCKNGNADEAL +F KL E GCPP+ +YNT+ ALW+ GD
Sbjct: 382 MISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGD 441
Query: 16 RSRAL 2
+ RAL
Sbjct: 442 KIRAL 446
Score = 209 bits (531), Expect = 2e-51
Identities = 107/304 (35%), Positives = 166/304 (54%), Gaps = 1/304 (0%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PD + YN ++G+CK +D A + LS + G V TYNI++ L N GK + +K+
Sbjct: 249 PDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKL 308
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
+ ++ C+P ITY+ LI A +G +EA + M + L PD Y+Y+ +I +CR
Sbjct: 309 MSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCR 368
Query: 550 EGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVT 371
EG +D A EF+ + S G PD++SYN +L +L G D+ + ++ C PN +
Sbjct: 369 EGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGS 428
Query: 370 YSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFL-DYM 194
Y+ L AL G A+ ++ ML G+ PD TY+ LIS LC++G +D AI L D
Sbjct: 429 YNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMF 488
Query: 193 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDR 14
S C P +++YNT+L LCK +A+EV + GC P+ +TY ++ + G R
Sbjct: 489 ESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWR 548
Query: 13 SRAL 2
A+
Sbjct: 549 YDAM 552
Score = 130 bits (327), Expect = 7e-28
Identities = 72/216 (33%), Positives = 119/216 (55%), Gaps = 2/216 (0%)
Frame = -1
Query: 910 PDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKM 731
PD ++Y+ IS LC+ ++D A + L M + G PD+++YN ++ SLC G D A +
Sbjct: 354 PDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNI 413
Query: 730 LDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCR 551
++L E C P +Y L A G A+ + EML G+ PD TYN++I +CR
Sbjct: 414 FEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCR 473
Query: 550 EGLMDEAFEF-VRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 374
+GL+D+A E V S C+P VISYN +L L + D +++ M + C PN
Sbjct: 474 DGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNET 533
Query: 373 TYSILISALCRDGQLDEAINLLKVMLD-EGLTPDTY 269
TY++LI + G +A+ L ++++ + ++ D++
Sbjct: 534 TYTLLIQGIGFAGWRYDAMELANLLVNMDAISEDSF 569
Score = 117 bits (293), Expect = 6e-24
Identities = 59/184 (32%), Positives = 96/184 (52%)
Frame = -1
Query: 556 CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 377
C+ DE+ F++ + +RG KPDVI L++ N K + ++M E+ +P+V
Sbjct: 88 CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-EILEKHGKPDV 146
Query: 376 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 197
Y+ +IS C+ ++D A +L M G PD TY+ LI C GRLDLA+ +D
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206
Query: 196 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 17
++ C P ++ Y ++ A G DEA+++ ++ G PD TYN +V+ + G
Sbjct: 207 LLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGM 266
Query: 16 RSRA 5
RA
Sbjct: 267 LDRA 270
Score = 82.8 bits (203), Expect = 2e-13
Identities = 44/146 (30%), Positives = 74/146 (50%)
Frame = -1
Query: 439 KWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYD 260
K+D+ + M + +P+V+ + LI ++++AI +++++ G PD + Y+
Sbjct: 92 KYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYN 150
Query: 259 PLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAEN 80
+IS CK R+D A LD M G PD+V YN ++ C G D AL V +L ++
Sbjct: 151 AVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKD 210
Query: 79 GCPPDVSTYNTMVSALWNHGDRSRAL 2
C P V TY ++ A G A+
Sbjct: 211 NCKPTVITYTILIEATITQGGIDEAM 236