BLASTX nr result

ID: Rehmannia26_contig00019720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00019720
         (668 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006473852.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...    66   8e-09
ref|XP_006435443.1| hypothetical protein CICLE_v10001069mg [Citr...    66   8e-09
ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi...    63   9e-08
emb|CAN64878.1| hypothetical protein VITISV_030794 [Vitis vinifera]    60   6e-07

>ref|XP_006473852.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Citrus sinensis]
          Length = 466

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 50/147 (34%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
 Frame = +3

Query: 3   AAFLSTLXXXXXXXXXXXXXXXXLSDLGEG----------KQQESNNASNGNKL-NMMEE 149
           AAFLS L                LSD+ +           +QQE+  ASNG+   N +  
Sbjct: 318 AAFLSALAGVEIAEVAARAAVTTLSDVDDRASKGSLMRNTRQQEAGVASNGDATQNALAR 377

Query: 150 ALVEAKSQXXXXXXXXXXAISGIA-TQSKEIEDKILQFEEFDLEMERKXXXXXXXXXXXX 326
           A V+A S           AISGI   Q KEI+DKI++FE  DL+ME +            
Sbjct: 378 ASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLF 437

Query: 327 XXXXTVLFHKIGAQKSGENTGEVIKIE 407
               +VLFHK  A+K+G+ T E +K +
Sbjct: 438 VDQLSVLFHKSNARKNGDRTEENVKTD 464


>ref|XP_006435443.1| hypothetical protein CICLE_v10001069mg [Citrus clementina]
           gi|557537565|gb|ESR48683.1| hypothetical protein
           CICLE_v10001069mg [Citrus clementina]
          Length = 466

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 50/147 (34%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
 Frame = +3

Query: 3   AAFLSTLXXXXXXXXXXXXXXXXLSDLGEG----------KQQESNNASNGNKL-NMMEE 149
           AAFLS L                LSD+ +           +QQE+  ASNG+   N +  
Sbjct: 318 AAFLSALAGVEIAEVAARAAVTTLSDVDDRASKGSLMRNTRQQEAEVASNGDATQNALAR 377

Query: 150 ALVEAKSQXXXXXXXXXXAISGIA-TQSKEIEDKILQFEEFDLEMERKXXXXXXXXXXXX 326
           A V+A S           AISGI   Q KEI+DKI++FE  DL+ME +            
Sbjct: 378 ASVDASSLIEKEELDVEKAISGIVEVQMKEIQDKIIRFESLDLQMEEEWKQLEQVKNLLF 437

Query: 327 XXXXTVLFHKIGAQKSGENTGEVIKIE 407
               +VLFHK  A+K+G+ T E +K +
Sbjct: 438 VDQLSVLFHKSNARKNGDRTEENVKTD 464


>ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera]
           gi|297745602|emb|CBI40767.3| unnamed protein product
           [Vitis vinifera]
          Length = 492

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 51/144 (35%), Positives = 62/144 (43%), Gaps = 15/144 (10%)
 Frame = +3

Query: 3   AAFLSTLXXXXXXXXXXXXXXXXLSDLGEGKQQES-------------NNASNGNKL-NM 140
           AAFLS L                LSD+   K +E              N  SNGN   N+
Sbjct: 342 AAFLSALVGVEVAEAAARAAVASLSDVDPRKMKEGLGSFANGARIQDPNVESNGNTTSNV 401

Query: 141 MEEALVEAKSQXXXXXXXXXXAISGIA-TQSKEIEDKILQFEEFDLEMERKXXXXXXXXX 317
           +E A V+AKS           AISGI   Q KEI DKI+ FEEF+L ME++         
Sbjct: 402 LEGAYVDAKSLLEREELDVERAISGITEVQMKEIRDKIVHFEEFELHMEKEWQQLQQMKN 461

Query: 318 XXXXXXXTVLFHKIGAQKSGENTG 389
                  T+LF K  A K+GE  G
Sbjct: 462 LLFVDQLTLLFQKAAAPKTGELMG 485


>emb|CAN64878.1| hypothetical protein VITISV_030794 [Vitis vinifera]
          Length = 422

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 52/144 (36%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
 Frame = +3

Query: 3   AAFLSTLXXXXXXXXXXXXXXXXLSDLGEGKQQES-------------NNASNGNKL-NM 140
           AAFLS L                LSD+   K +E              N  SNG+   N 
Sbjct: 272 AAFLSALVGVEVAEAAARAAVASLSDVDPRKMKEGLGSFANGARIQDPNVESNGDTTSNA 331

Query: 141 MEEALVEAKSQXXXXXXXXXXAISGIA-TQSKEIEDKILQFEEFDLEMERKXXXXXXXXX 317
           +E A V+AKS           AISGI   Q KEI DKI+ FEEF+L ME++         
Sbjct: 332 LEGAYVDAKSLLEREELDVERAISGITEVQMKEIRDKIVHFEEFELHMEKEXQQLQQMKX 391

Query: 318 XXXXXXXTVLFHKIGAQKSGENTG 389
                  T+LF K  A K+GE  G
Sbjct: 392 LLFVDQLTLLFQKAAAPKTGELMG 415


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