BLASTX nr result
ID: Rehmannia26_contig00019174
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00019174
(1897 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 535 e-149
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 456 e-125
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 451 e-124
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati... 431 e-118
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo... 431 e-118
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr... 426 e-116
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr... 426 e-116
ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III s... 424 e-116
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s... 424 e-116
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s... 422 e-115
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata] 422 e-115
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s... 418 e-114
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin... 417 e-114
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu... 417 e-114
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor... 411 e-112
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 404 e-110
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s... 404 e-110
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati... 396 e-107
gb|ABU45208.1| unknown [Solanum bulbocastanum] 389 e-105
ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252... 386 e-104
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 535 bits (1379), Expect = e-149
Identities = 289/560 (51%), Positives = 364/560 (65%), Gaps = 21/560 (3%)
Frame = +1
Query: 163 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEE--- 333
MD D+L D PS+ P RP+RFAPKGSKFKPR + + S + + ++S P+
Sbjct: 1 MDFDDL-DEPSQAPTRPSRFAPKGSKFKPRTEPVAATSNSIAKKEELDSKPVSPINSSTT 59
Query: 334 --LGIKSDIKPEYVNDAIEMDVEVKLGVKEEEIDDLMXXXXXXXXXXXXXXXXXXIDVYF 507
G D V+ ++ MDV+ K+ + E+ D IDVY
Sbjct: 60 AAAGKAEDAASASVSQSVAMDVDAKVEEEAEQPKD----EPMESREEGEDEIVREIDVYL 115
Query: 508 TPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGAD 687
TP +DP T+LYVLQYPLRPLWRPYELD+ CEEVRVK SAEVE+DLAVDVDSKNYDS AD
Sbjct: 116 TPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSDAD 175
Query: 688 PRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTV 867
PRV M KQ LT+ WKPP +G+AVGVL GNKL+LNPIH VVQLRPS+QH + SKR+T
Sbjct: 176 PRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTT 235
Query: 868 GSSNVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLKYHGASSDLTARYLQ 1047
SSN+ D K Q KD+ EDW+PL YHGA SD++ Y++
Sbjct: 236 ASSNLEDNTK--GEEVTTGSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISMSYVR 293
Query: 1048 KMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPP 1227
KM + S I FSM + DY+N+LCPG + + S GPS R LL+LPL ERFRTWLL+GPP
Sbjct: 294 KMVEHDSSHIQFSM-NHDYVNTLCPGTSNENNGSNGPS-RVLLSLPLEERFRTWLLQGPP 351
Query: 1228 VHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYV-LLF 1404
+HRF+ALKHLAPD SVE++L VL HA++VQGLW+PKS L+YG DQGI LARDYV LLF
Sbjct: 352 IHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVLLLF 411
Query: 1405 SKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSCVKSNPSVVKKQE 1584
S+ II+ SQLP + L AM DVL+ +A ER + DWK +E PD++ +K NP +V++QE
Sbjct: 412 SRTPIINNSQLPQQQKLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLNPKIVREQE 471
Query: 1585 EEWECLEKRINDHVCGGRNRPGMRSSN---TTNNPAT*KSSSKLA------------MAE 1719
+ WE LEK I + + G +NRP ++S+ TTNNPAT KS SK A M+E
Sbjct: 472 QTWERLEKLITEKIFGDKNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRPMSE 531
Query: 1720 EVREAITKALQKFLKVSRFC 1779
E REA+ KALQK + + C
Sbjct: 532 ETREALPKALQKLFQSHKVC 551
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 456 bits (1174), Expect = e-125
Identities = 271/573 (47%), Positives = 349/573 (60%), Gaps = 34/573 (5%)
Frame = +1
Query: 163 MDLDELLDGPSKGP-NRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEELG 339
MDLD+L DGP++ P RP+RFAPK SK K PK EPS PS D + I KKEE
Sbjct: 1 MDLDDL-DGPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTL--INKKEE-- 55
Query: 340 IKSDIKPEYV------------NDAIEMDVEVKLGVKEEEIDDLMXXXXXXXXXXXXXXX 483
D +P V N IEM+VE K V++ +D
Sbjct: 56 ---DSQPPLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEED----------DRDEDPV 102
Query: 484 XXXIDVYFTPF-VDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVD 660
IDV+FTP D T++YVLQYPLRP WRPYEL E C+EVRVKP SAEVE+DL++DVD
Sbjct: 103 VREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVD 162
Query: 661 SKNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLE 840
SKNYD A +MKKQ L+ WKPP +G+ VGVL GNKL+LNPIH VVQLRPS+++L
Sbjct: 163 SKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLS 222
Query: 841 SRESKRKTVGSSNVNDTVK--XXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLKYHG 1014
S +KRK + + N VK Q D+ E WVPLKYH
Sbjct: 223 SGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHS 282
Query: 1015 ASSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLC-PGAYSGSFSSKGPSIRFLLTLPLR 1191
+ SD +ARYLQKM A++ S I F MS +Y+NSLC PG + SKG S RFLL++PL
Sbjct: 283 SESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLE 342
Query: 1192 ERFRTWLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGI 1371
ERF+T L EGPPVHRF ALKH APD SVE+VLGVL HA +VQGLWVPKS L++ QG+
Sbjct: 343 ERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGV 402
Query: 1372 AVLARDYV-LLFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSC 1548
A LARDY+ LLFSK +I+ SQ+ +L A+ L++LAVER +F+DWK +E D+S
Sbjct: 403 APLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSF 462
Query: 1549 VKSNPSVVKKQEEEWECLEKRINDHV-CGGRNRPGMRSS-----------NTTNNPAT*K 1692
+K +P +V++Q WE LEK+I D + GGR P ++S +T ++ AT
Sbjct: 463 MKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRA 522
Query: 1693 SSS----KLAMAEEVREAITKALQKFLKVSRFC 1779
++ + AM+ E REA+ KAL++ ++ + C
Sbjct: 523 TNGTPVRRTAMSAETREALPKALEEVFRLHKVC 555
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
vinifera]
Length = 672
Score = 451 bits (1160), Expect = e-124
Identities = 268/571 (46%), Positives = 347/571 (60%), Gaps = 32/571 (5%)
Frame = +1
Query: 163 MDLDELLDGPSKGP-NRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEELG 339
MDLD+L DGP++ P RP+RFAPK SK K PK EPS PS D + I KKEE
Sbjct: 1 MDLDDL-DGPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTL--INKKEE-- 55
Query: 340 IKSDIKPEYV------------NDAIEMDVEVKLGVKEEEIDDLMXXXXXXXXXXXXXXX 483
D +P V N IEM+VE K V++ +D
Sbjct: 56 ---DSQPPLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEED----------DRDEDPV 102
Query: 484 XXXIDVYFTPF-VDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVD 660
IDV+FTP D T++YVLQYPLRP WRPYEL E C+EVRVKP SAEVE+DL++DVD
Sbjct: 103 VREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVD 162
Query: 661 SKNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLE 840
SKNYD A +MKKQ L+ WKPP +G+ VGVL GNKL+LNPIH VVQLRPS+++L
Sbjct: 163 SKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLS 222
Query: 841 SRESKRKTVGSSNVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLKYHGAS 1020
S +KRK + + N VK ++ WVPLKYH +
Sbjct: 223 SGGAKRKNNVTGDTNSAVKLEVSNEEESVGSL--------------KKQSWVPLKYHSSE 268
Query: 1021 SDLTARYLQKMKAQEGSQISFSMSSDDYLNSLC-PGAYSGSFSSKGPSIRFLLTLPLRER 1197
SD +ARYLQKM A++ S I F MS +Y+NSLC PG + SKG S RFLL++PL ER
Sbjct: 269 SDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEER 328
Query: 1198 FRTWLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAV 1377
F+T L EGPPVHRF ALKH APD SVE+VLGVL HA +VQGLWVPKS L++ QG+A
Sbjct: 329 FKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAP 388
Query: 1378 LARDYV-LLFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSCVK 1554
LARDY+ LLFSK +I+ SQ+ +L A+ L++LAVER +F+DWK +E D+S +K
Sbjct: 389 LARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMK 448
Query: 1555 SNPSVVKKQEEEWECLEKRINDHV-CGGRNRPGMRSS-----------NTTNNPAT*KSS 1698
+P +V++Q WE LEK+I D + GGR P ++S +T ++ AT ++
Sbjct: 449 LHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATN 508
Query: 1699 S----KLAMAEEVREAITKALQKFLKVSRFC 1779
+ AM+ E REA+ KAL++ ++ + C
Sbjct: 509 GTPVRRTAMSAETREALPKALEEVFRLHKVC 539
>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao]
Length = 736
Score = 431 bits (1107), Expect = e-118
Identities = 254/573 (44%), Positives = 330/573 (57%), Gaps = 34/573 (5%)
Frame = +1
Query: 163 MDLDEL--LDGPSKGPNRPARFAPKGSKFKPRPKA------EPSQSLPPSASDSMESLPI 318
MDLD+L LDGPS+ R +FAPK SKF PR K EPS P S P
Sbjct: 1 MDLDDLGELDGPSQVNTRTTKFAPKSSKFAPRLKPNFKLKPEPSSKQEPLNSGPKPEPPP 60
Query: 319 PKKEELGIKSDIKPEYVNDAIEMDVE---------VKLGVKEEEIDDLMXXXXXXXXXXX 471
P E + K + + E + + + + VK+ ++EE +D++
Sbjct: 61 PPPESISRKKENEEEDIKPPVIAETKTEQSFSNGAVKMEIEEEAKEDVIMNEGNREEEDM 120
Query: 472 XXXXXXXIDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAV 651
IDV+FTP +D T+LYVLQYPLRP WRPYELDE CEEVRVKP S EVE+DLAV
Sbjct: 121 VVRE---IDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAV 177
Query: 652 DVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQ 831
DVDS NYDS R++M KQ L++ W PP +G+AVGVL G+KL+LNPIH VVQLRPS+
Sbjct: 178 DVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMC 237
Query: 832 HLESRESKRKTVGSSNVNDTVK--XXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLK 1005
HL+ SKRK +++ TVK Q D +E WVPLK
Sbjct: 238 HLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLK 297
Query: 1006 YHGASSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLP 1185
YH + +D +A+YLQ+M A+E +I F+MS DY++SLCPGA S + ++GPS R LL++P
Sbjct: 298 YHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGA-SNNNKAQGPSRRLLLSIP 356
Query: 1186 LRERFRTWLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQ 1365
L ER + L EGPP HRF ALKH APD S+E++ VLQ HA +VQGLWVPKS L++ D
Sbjct: 357 LEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP 416
Query: 1366 GIAVLARDYV-LLFSKNAIIHKSQL-PTRPTLANAMIDVLNVLAVERDAFKDWKLRELPD 1539
LARDYV LLFSKN II +Q+ P+ + L +LA+ER +FKDWKL+E D
Sbjct: 417 -YKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENAD 475
Query: 1540 LSCVKSNPSVVKKQEEEWECLEKRINDHVC-GGRNRPGMRSSNTTNNPAT*KSSSK---- 1704
K P +VK QE+ W E + +H+C G + P T P +S K
Sbjct: 476 EGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRR 535
Query: 1705 --------LAMAEEVREAITKALQKFLKVSRFC 1779
M++E REAI KAL+K + + C
Sbjct: 536 VAPAVQAGRTMSDETREAIPKALKKVFQTHKVC 568
>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
Length = 700
Score = 431 bits (1107), Expect = e-118
Identities = 254/573 (44%), Positives = 330/573 (57%), Gaps = 34/573 (5%)
Frame = +1
Query: 163 MDLDEL--LDGPSKGPNRPARFAPKGSKFKPRPKA------EPSQSLPPSASDSMESLPI 318
MDLD+L LDGPS+ R +FAPK SKF PR K EPS P S P
Sbjct: 1 MDLDDLGELDGPSQVNTRTTKFAPKSSKFAPRLKPNFKLKPEPSSKQEPLNSGPKPEPPP 60
Query: 319 PKKEELGIKSDIKPEYVNDAIEMDVE---------VKLGVKEEEIDDLMXXXXXXXXXXX 471
P E + K + + E + + + + VK+ ++EE +D++
Sbjct: 61 PPPESISRKKENEEEDIKPPVIAETKTEQSFSNGAVKMEIEEEAKEDVIMNEGNREEEDM 120
Query: 472 XXXXXXXIDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAV 651
IDV+FTP +D T+LYVLQYPLRP WRPYELDE CEEVRVKP S EVE+DLAV
Sbjct: 121 VVRE---IDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAV 177
Query: 652 DVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQ 831
DVDS NYDS R++M KQ L++ W PP +G+AVGVL G+KL+LNPIH VVQLRPS+
Sbjct: 178 DVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMC 237
Query: 832 HLESRESKRKTVGSSNVNDTVK--XXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLK 1005
HL+ SKRK +++ TVK Q D +E WVPLK
Sbjct: 238 HLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLK 297
Query: 1006 YHGASSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLP 1185
YH + +D +A+YLQ+M A+E +I F+MS DY++SLCPGA S + ++GPS R LL++P
Sbjct: 298 YHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGA-SNNNKAQGPSRRLLLSIP 356
Query: 1186 LRERFRTWLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQ 1365
L ER + L EGPP HRF ALKH APD S+E++ VLQ HA +VQGLWVPKS L++ D
Sbjct: 357 LEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP 416
Query: 1366 GIAVLARDYV-LLFSKNAIIHKSQL-PTRPTLANAMIDVLNVLAVERDAFKDWKLRELPD 1539
LARDYV LLFSKN II +Q+ P+ + L +LA+ER +FKDWKL+E D
Sbjct: 417 -YKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENAD 475
Query: 1540 LSCVKSNPSVVKKQEEEWECLEKRINDHVC-GGRNRPGMRSSNTTNNPAT*KSSSK---- 1704
K P +VK QE+ W E + +H+C G + P T P +S K
Sbjct: 476 EGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRR 535
Query: 1705 --------LAMAEEVREAITKALQKFLKVSRFC 1779
M++E REAI KAL+K + + C
Sbjct: 536 VAPAVQAGRTMSDETREAIPKALKKVFQTHKVC 568
>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC5-like [Citrus sinensis]
gi|557527707|gb|ESR38957.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 690
Score = 426 bits (1095), Expect = e-116
Identities = 251/569 (44%), Positives = 340/569 (59%), Gaps = 30/569 (5%)
Frame = +1
Query: 163 MDLDELLD----GPSKGPNRPARFAPKGSKFKPRP-----KAEPSQSLPPSASDSMESLP 315
MDLD+ D PS+ P+R +RF PK SK P+P KAEP Q P D+ +
Sbjct: 1 MDLDDFDDLDKATPSQVPSRVSRFLPKSSKLVPKPEPPPEKAEPQQPKKPKTEDNFQQTT 60
Query: 316 ----IPKKEELGIKSDIKPEYVNDAIEMDVEVKLGVKEEEIDDLMXXXXXXXXXXXXXXX 483
PK E D+K E E + E + KEE +D M
Sbjct: 61 SVNLTPKTEPSVSNGDVKLES-KPVPEPETEPR---KEEPVDLNMDELHLQDDEDMIVRE 116
Query: 484 XXXIDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDS 663
IDV+FTP +D ++LYV+QYPLRPLWRPYELDE CEEVRVKP+++EVE+DL++DVDS
Sbjct: 117 ---IDVFFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDS 173
Query: 664 KNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLES 843
N+DS R+ M KQ L+ W PP +G+A+GVL GNKL+LNPIH VVQLR S+ L+S
Sbjct: 174 NNWDSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKS 233
Query: 844 RESKRKTVGSSNVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEED-WVPLKYHGAS 1020
SKRK +S + VK + + +EE+ WVPLKYHG+
Sbjct: 234 GGSKRKNNVASEI--PVKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKYHGSK 291
Query: 1021 SDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERF 1200
SD +ARYLQ+M +E S I F+M+ DY++SLCPGA S + SKGPS RFLL++PL ERF
Sbjct: 292 SDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERF 351
Query: 1201 RTWLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVL 1380
+ L EG PV RF L H AP+++VE+V+GVL + +VQGLW P+SPL++ D+ + L
Sbjct: 352 KKLLCEGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDK-MKCL 410
Query: 1381 ARDYVLL-FSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSCVKS 1557
ARDYVLL FSKN+++ L P L + + LN+ AVER FKDWK R+ DLS +K
Sbjct: 411 ARDYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKE 470
Query: 1558 NPSVVKKQEEEWECLEKRINDHV-----CGG--RNRPG--------MRSSNTTNNPAT*K 1692
+P++V KQE+ W EK+I D + G RN G +++ N++N P+
Sbjct: 471 HPNIVIKQEQVWAAAEKQITDVINKLGKSGSTLRNDAGKSAMVNKHLKAINSSNGPSGAL 530
Query: 1693 SSSKLAMAEEVREAITKALQKFLKVSRFC 1779
+ +K ++ E REA+ KALQK ++ + C
Sbjct: 531 TGNK-NLSNESREALPKALQKLFQIHKVC 558
>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|557527706|gb|ESR38956.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 637
Score = 426 bits (1095), Expect = e-116
Identities = 251/569 (44%), Positives = 340/569 (59%), Gaps = 30/569 (5%)
Frame = +1
Query: 163 MDLDELLD----GPSKGPNRPARFAPKGSKFKPRP-----KAEPSQSLPPSASDSMESLP 315
MDLD+ D PS+ P+R +RF PK SK P+P KAEP Q P D+ +
Sbjct: 1 MDLDDFDDLDKATPSQVPSRVSRFLPKSSKLVPKPEPPPEKAEPQQPKKPKTEDNFQQTT 60
Query: 316 ----IPKKEELGIKSDIKPEYVNDAIEMDVEVKLGVKEEEIDDLMXXXXXXXXXXXXXXX 483
PK E D+K E E + E + KEE +D M
Sbjct: 61 SVNLTPKTEPSVSNGDVKLES-KPVPEPETEPR---KEEPVDLNMDELHLQDDEDMIVRE 116
Query: 484 XXXIDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDS 663
IDV+FTP +D ++LYV+QYPLRPLWRPYELDE CEEVRVKP+++EVE+DL++DVDS
Sbjct: 117 ---IDVFFTPSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDS 173
Query: 664 KNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLES 843
N+DS R+ M KQ L+ W PP +G+A+GVL GNKL+LNPIH VVQLR S+ L+S
Sbjct: 174 NNWDSEKASRLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKS 233
Query: 844 RESKRKTVGSSNVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEED-WVPLKYHGAS 1020
SKRK +S + VK + + +EE+ WVPLKYHG+
Sbjct: 234 GGSKRKNNVASEI--PVKLEDSNQDKSVGSSKKQNKRMGSIEQRSNEEECWVPLKYHGSK 291
Query: 1021 SDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERF 1200
SD +ARYLQ+M +E S I F+M+ DY++SLCPGA S + SKGPS RFLL++PL ERF
Sbjct: 292 SDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPSRRFLLSMPLEERF 351
Query: 1201 RTWLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVL 1380
+ L EG PV RF L H AP+++VE+V+GVL + +VQGLW P+SPL++ D+ + L
Sbjct: 352 KKLLCEGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRSPLLFNNDK-MKCL 410
Query: 1381 ARDYVLL-FSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSCVKS 1557
ARDYVLL FSKN+++ L P L + + LN+ AVER FKDWK R+ DLS +K
Sbjct: 411 ARDYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWKFRQQTDLSFIKE 470
Query: 1558 NPSVVKKQEEEWECLEKRINDHV-----CGG--RNRPG--------MRSSNTTNNPAT*K 1692
+P++V KQE+ W EK+I D + G RN G +++ N++N P+
Sbjct: 471 HPNIVIKQEQVWAAAEKQITDVINKLGKSGSTLRNDAGKSAMVNKHLKAINSSNGPSGAL 530
Query: 1693 SSSKLAMAEEVREAITKALQKFLKVSRFC 1779
+ +K ++ E REA+ KALQK ++ + C
Sbjct: 531 TGNK-NLSNESREALPKALQKLFQIHKVC 558
>ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X4 [Solanum tuberosum]
Length = 536
Score = 424 bits (1090), Expect = e-116
Identities = 249/557 (44%), Positives = 331/557 (59%), Gaps = 17/557 (3%)
Frame = +1
Query: 163 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPS-QSLPPSASDSMESLPIPKKEELG 339
MDLD DGPSK P R +RFAPK SK KP+P+ +P ++LP S +S + KKEEL
Sbjct: 1 MDLD--FDGPSKVPTRQSRFAPKSSKLKPQPETKPKIETLPHS-----DSAILTKKEELS 53
Query: 340 IK-SDIKPEYVNDAIEMDVEVK---LGVKEEEIDDLMXXXXXXXXXXXXXXXXXXIDVYF 507
+ ++ ND + ++ E LG E ++ D IDV
Sbjct: 54 VSLAENGAVTGNDDVPLEGETTGNYLGEDEGQVTD-----------SDHDEVVREIDVCI 102
Query: 508 TPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGAD 687
P DP T+LYV QYPLR +WRPYEL+E C+EVR++P++AE+E+DLA+D+DSKN+D +
Sbjct: 103 NPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSV 162
Query: 688 PRVQMKKQILTALWKP--PHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRK 861
+KKQ+L+ W P SG+AVGVL G+KL+LNP+H VVQLRPS ++L+ E K+
Sbjct: 163 HAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKN 222
Query: 862 TVGSSNVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLKYHGASSDLTARY 1041
+ ND KD E W+ LKYHGA SD++ARY
Sbjct: 223 VTTN---NDEKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHGARSDISARY 279
Query: 1042 LQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEG 1221
LQKM +EGS + FSMS DYLN+ PG + + K R L LPL ER RTWLLEG
Sbjct: 280 LQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWLLEG 338
Query: 1222 PPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLL 1401
PP+HRF+ALKHLAPD S +E++ VLQ +A++VQGLWVPKS LVYGT+ G+ VLAR++VL
Sbjct: 339 PPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLY 398
Query: 1402 -FSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSCVKSNPSVVKK 1578
F+K +I KS RP A L LAVER DWKL+E PD VV++
Sbjct: 399 EFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVRE 458
Query: 1579 QEEEWECLEKRINDHVCGGRNRPGMRSSNTTN---------NPAT*KSSSKLAMAEEVRE 1731
++ WECL K+IND + GGRNRP M++ N + T S + +M+EE+RE
Sbjct: 459 KQATWECLGKQINDVLPGGRNRPTMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEEIRE 518
Query: 1732 AITKALQKFLKVSRFCR 1782
A+ KALQ+ + + CR
Sbjct: 519 ALPKALQEVFRTYKVCR 535
>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
lycopersicum]
Length = 669
Score = 424 bits (1090), Expect = e-116
Identities = 246/555 (44%), Positives = 332/555 (59%), Gaps = 16/555 (2%)
Frame = +1
Query: 163 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEELGI 342
MDLD DGPSK P R +RFAPK SK KP+P+ +P P + ++ + KKEEL +
Sbjct: 1 MDLD--FDGPSKVPTRQSRFAPKSSKLKPQPETKPKIETLPQSDSAIST----KKEELTV 54
Query: 343 K-SDIKPEYVNDAIEMDVEVK---LGVKEEEIDDLMXXXXXXXXXXXXXXXXXXIDVYFT 510
++ + ND + ++ E LG EE++ D IDV
Sbjct: 55 HLAENRAVTGNDDVPLEGETTGNDLGEDEEQVTD-----------SDHDEIVREIDVCIN 103
Query: 511 PFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADP 690
P DP T+LYV QYPL+ +WRPYEL+E C+EVR++P++AE+E+DLA+D+DSKN+D +
Sbjct: 104 PSFDPSTQLYVFQYPLKAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVH 163
Query: 691 RVQMKKQILTALW--KPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKT 864
+KKQ+L+ W P SG+AVGVL G+KL+LNP+H VVQLRPS ++L+ E K+
Sbjct: 164 AATVKKQMLSTSWIPLPTCTSGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKNI 223
Query: 865 VGSSNVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLKYHGASSDLTARYL 1044
+ + ND KD E W+ LKYHGA SD++ARYL
Sbjct: 224 ITN---NDEKSVENEDVKEKRPVGPSKKQNKSPGIEKDIGEHWLHLKYHGARSDISARYL 280
Query: 1045 QKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGP 1224
QKM +EGS + FSMS DYLN+ CPG + + K R L LPL ER R WLLEGP
Sbjct: 281 QKMSMEEGSPVPFSMSPVDYLNAFCPGRPTDTDRLKILRTR-LSQLPLEERVRIWLLEGP 339
Query: 1225 PVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLL- 1401
P+HRF+AL HLAPD S +E++ VLQ +A++VQGLWVPKS LVYGT+ G+ VLAR++VL
Sbjct: 340 PIHRFDALMHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYE 399
Query: 1402 FSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSCVKSNPSVVKKQ 1581
F+K +I KS RP A L LAVER DWKL+E PD VV++Q
Sbjct: 400 FTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREQ 459
Query: 1582 EEEWECLEKRINDHVCGGRNRPGM-----RSSNTTNNPAT*KSSS----KLAMAEEVREA 1734
+ WECL K+IND + GGR RP M R+++ T P+ K +S + +M+EE+REA
Sbjct: 460 QATWECLGKQINDVLPGGRTRPTMKNPINRNADITALPSGDKPTSSSLLRTSMSEEIREA 519
Query: 1735 ITKALQKFLKVSRFC 1779
+ KALQ+ + + C
Sbjct: 520 LPKALQEVFRTYKVC 534
>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X1 [Solanum tuberosum]
Length = 669
Score = 422 bits (1085), Expect = e-115
Identities = 248/556 (44%), Positives = 330/556 (59%), Gaps = 17/556 (3%)
Frame = +1
Query: 163 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPS-QSLPPSASDSMESLPIPKKEELG 339
MDLD DGPSK P R +RFAPK SK KP+P+ +P ++LP S +S + KKEEL
Sbjct: 1 MDLD--FDGPSKVPTRQSRFAPKSSKLKPQPETKPKIETLPHS-----DSAILTKKEELS 53
Query: 340 IK-SDIKPEYVNDAIEMDVEVK---LGVKEEEIDDLMXXXXXXXXXXXXXXXXXXIDVYF 507
+ ++ ND + ++ E LG E ++ D IDV
Sbjct: 54 VSLAENGAVTGNDDVPLEGETTGNYLGEDEGQVTD-----------SDHDEVVREIDVCI 102
Query: 508 TPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGAD 687
P DP T+LYV QYPLR +WRPYEL+E C+EVR++P++AE+E+DLA+D+DSKN+D +
Sbjct: 103 NPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSV 162
Query: 688 PRVQMKKQILTALWKP--PHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRK 861
+KKQ+L+ W P SG+AVGVL G+KL+LNP+H VVQLRPS ++L+ E K+
Sbjct: 163 HAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKN 222
Query: 862 TVGSSNVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLKYHGASSDLTARY 1041
+ ND KD E W+ LKYHGA SD++ARY
Sbjct: 223 VTTN---NDEKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHGARSDISARY 279
Query: 1042 LQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEG 1221
LQKM +EGS + FSMS DYLN+ PG + + K R L LPL ER RTWLLEG
Sbjct: 280 LQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWLLEG 338
Query: 1222 PPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLL 1401
PP+HRF+ALKHLAPD S +E++ VLQ +A++VQGLWVPKS LVYGT+ G+ VLAR++VL
Sbjct: 339 PPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLY 398
Query: 1402 -FSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSCVKSNPSVVKK 1578
F+K +I KS RP A L LAVER DWKL+E PD VV++
Sbjct: 399 EFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVRE 458
Query: 1579 QEEEWECLEKRINDHVCGGRNRPGMRSSNTTN---------NPAT*KSSSKLAMAEEVRE 1731
++ WECL K+IND + GGRNRP M++ N + T S + +M+EE+RE
Sbjct: 459 KQATWECLGKQINDVLPGGRNRPTMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEEIRE 518
Query: 1732 AITKALQKFLKVSRFC 1779
A+ KALQ+ + + C
Sbjct: 519 ALPKALQEVFRTYKVC 534
>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
Length = 666
Score = 422 bits (1085), Expect = e-115
Identities = 261/568 (45%), Positives = 335/568 (58%), Gaps = 29/568 (5%)
Frame = +1
Query: 163 MDLDELLDGPSKGP--NRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEEL 336
MDLD DGPSK P +R ARFAPK SK KP+PK EP P ++ S KKEE+
Sbjct: 1 MDLD--FDGPSKPPPSSRAARFAPKNSKLKPQPKPEPEPEPEPLTDPTIPS----KKEEI 54
Query: 337 GIKSDIKPEYVN-----DAIEMDVEVKLGVKEEEIDDLMXXXXXXXXXXXXXXXXXXIDV 501
K + E + D + DVEV+ V E ++ ID+
Sbjct: 55 DSKPLLTLENGSSAPSIDTEKADVEVQQDVAMEIVES------------GEDEVVREIDM 102
Query: 502 YFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSG 681
YFTP +DP T+LYVLQ P+RP+WRPYEL+E C+EVR++PT+A++E+DLA+D DSKN+D
Sbjct: 103 YFTPSLDPNTQLYVLQSPMRPVWRPYELEERCKEVRLRPTTAQMEVDLAIDFDSKNFDRD 162
Query: 682 ADPRVQMKKQILTALW--KPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESK 855
+ +M+KQ ++ W P SG+AVGVL G+KL+LNPIHTVVQLRPS QHL+ E K
Sbjct: 163 SIYAEKMEKQTVSTSWIPVPTGTSGYAVGVLIGDKLHLNPIHTVVQLRPSKQHLKESELK 222
Query: 856 RKTVGSSNVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLKYHGASSDLTA 1035
K + +SN TV+ KD EE WV LKYHGA S+++A
Sbjct: 223 -KNIATSNDEKTVENEEIKENKPVAPSKKQNKPPG--NDKDIEEHWVHLKYHGARSEISA 279
Query: 1036 RYLQKMKAQEGSQISFSMSSD----------DYLNSLCPGAYSGSFSSKGPSIRFLLTLP 1185
RYLQ+M +EGS I FSMS DYL +LCPG + + K IR + LP
Sbjct: 280 RYLQRMAMEEGSPIPFSMSLAFFSVNLIHRVDYLRTLCPGRPNDTDKYKDLRIR-VSQLP 338
Query: 1186 LRERFRTWLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQ 1365
L ERFRTWL EGPP+HRF ALKHLA D VEE+L VLQ +A+VVQGLWVPKS LVYG +
Sbjct: 339 LDERFRTWLHEGPPIHRFGALKHLALDNPVEEILEVLQRYAQVVQGLWVPKSSLVYGRND 398
Query: 1366 GIAVLARDYVLL-FSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDL 1542
G VLARD+VL FSK+ I +S +P A L +LAVER DWKL+E PD
Sbjct: 399 GHEVLARDFVLFEFSKSPFIKQSVFDRKPEFFKAATPALKLLAVERPDLNDWKLKEHPDK 458
Query: 1543 SCVKSNPSVVKKQEEEWECLEKRINDHVCGGRNRPGMR--SSNTTNNPA-------T*KS 1695
+VK+Q+ WE L K+I + GGRNRP M+ S+ + PA T +S
Sbjct: 459 EFENLYGDLVKEQQVTWERLGKQIYGLLAGGRNRPTMKNPSNPSAGIPALPSGGKPTPRS 518
Query: 1696 SSKLAMAEEVREAITKALQKFLKVSRFC 1779
++ +M+E REA+ KALQK + + C
Sbjct: 519 VTRTSMSERTREALQKALQKVFRTHKVC 546
>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X2 [Solanum tuberosum]
Length = 657
Score = 418 bits (1075), Expect = e-114
Identities = 247/556 (44%), Positives = 333/556 (59%), Gaps = 17/556 (3%)
Frame = +1
Query: 163 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPS-QSLPPSASDSMESLPIPKKEELG 339
MDLD DGPSK P R +RFAPK SK KP+P+ +P ++LP S +S + KKEEL
Sbjct: 1 MDLD--FDGPSKVPTRQSRFAPKSSKLKPQPETKPKIETLPHS-----DSAILTKKEELS 53
Query: 340 IK-SDIKPEYVNDAIEMDVEVK---LGVKEEEIDDLMXXXXXXXXXXXXXXXXXXIDVYF 507
+ ++ ND + ++ E LG E ++ D IDV
Sbjct: 54 VSLAENGAVTGNDDVPLEGETTGNYLGEDEGQVTD-----------SDHDEVVREIDVCI 102
Query: 508 TPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGAD 687
P DP T+LYV QYPLR +WRPYEL+E C+EVR++P++AE+E+DLA+D+DSKN+D +
Sbjct: 103 NPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSV 162
Query: 688 PRVQMKKQILTALWKP--PHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRK 861
+KKQ+L+ W P SG+AVGVL G+KL+LNP+H VVQLRPS ++L+ E K K
Sbjct: 163 HAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELK-K 221
Query: 862 TVGSSNVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLKYHGASSDLTARY 1041
V ++N +V+ ++ W+ LKYHGA SD++ARY
Sbjct: 222 NVTTNNDEKSVENEDVKEKRPMGP--------------SKKQHWLHLKYHGARSDISARY 267
Query: 1042 LQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEG 1221
LQKM +EGS + FSMS DYLN+ PG + + K R L LPL ER RTWLLEG
Sbjct: 268 LQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWLLEG 326
Query: 1222 PPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLL 1401
PP+HRF+ALKHLAPD S +E++ VLQ +A++VQGLWVPKS LVYGT+ G+ VLAR++VL
Sbjct: 327 PPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLY 386
Query: 1402 -FSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSCVKSNPSVVKK 1578
F+K +I KS RP A L LAVER DWKL+E PD VV++
Sbjct: 387 EFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVRE 446
Query: 1579 QEEEWECLEKRINDHVCGGRNRPGMRSSNTTN---------NPAT*KSSSKLAMAEEVRE 1731
++ WECL K+IND + GGRNRP M++ N + T S + +M+EE+RE
Sbjct: 447 KQATWECLGKQINDVLPGGRNRPTMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEEIRE 506
Query: 1732 AITKALQKFLKVSRFC 1779
A+ KALQ+ + + C
Sbjct: 507 ALPKALQEVFRTYKVC 522
>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 677
Score = 417 bits (1073), Expect = e-114
Identities = 249/585 (42%), Positives = 344/585 (58%), Gaps = 46/585 (7%)
Frame = +1
Query: 163 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPSQS----LPPSASDSME--SLPIPK 324
MD + LD PS+ P+RP+++APK +KFKP+PK +P+ LP S S+ E + P+ K
Sbjct: 1 MDGLDDLDKPSQVPSRPSKYAPKSAKFKPQPKTKPNPKPDPQLPSSNSELQEPQNAPLSK 60
Query: 325 KEELGIKSDIKPEYV-----------NDAIEMDVEVKL-------GVKEEEIDDLMXXXX 450
K E + +IKP+ + N A++M+++ + G EEE ++ M
Sbjct: 61 KNEDDEEEEIKPKIISTPKNEAWLSNNGAVKMEIDDSMDEDKREEGENEEEEEEDMIVRE 120
Query: 451 XXXXXXXXXXXXXXIDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAE 630
IDV+FTP +D T+LYV+QYPLRP WRPYELDE CEEVRVKP S E
Sbjct: 121 --------------IDVFFTPSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTE 166
Query: 631 VEIDLAVDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVV 810
VE+DL +D DS N+D + KKQ L+ + PP ++G+AVGVL GNKL+LNPIH VV
Sbjct: 167 VEVDLTID-DSSNWDPAQASKYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVV 225
Query: 811 QLRPSVQHLESRESKRKTVGSSNVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEED 990
QLRPS++H+ S +SKRK S+ +N VK ++
Sbjct: 226 QLRPSLEHVNSNDSKRKN--SATLNPEVKLEDSNEGKPIG--------------SSKKQC 269
Query: 991 WVPLKYHGASSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRF 1170
W+ LKYHG+ SD ++RYL+KM AQE S + F+M+ DY++SLCP A + SKGP RF
Sbjct: 270 WISLKYHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRF 329
Query: 1171 LLTLPLRERFRTWLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLV 1350
LL+LPL ER + +LEGPPV RF LKH APD+SVE+VL VLQ++ ++VQGLW PKS L+
Sbjct: 330 LLSLPLAERLKKLILEGPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLL 389
Query: 1351 Y---GTDQGIAVLARDYV-LLFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDW 1518
+ + QGI RDYV LLFSKN +I+ SQ+ + + LN+ AVER +FKDW
Sbjct: 390 FPDANSKQGI----RDYVLLLFSKNLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDW 445
Query: 1519 KLRELPDLSCVKSNPSVVKKQEEEWECLEKRINDHVCGGRNRPGMRSS--------NTTN 1674
K +E D + +K P +VKKQEE W+ EKR++ V + M+++ NT
Sbjct: 446 KFKEHTDTTFIKLYPDIVKKQEEAWDNTEKRLS-KVFDRSGKASMKNAIPKPPMVHNTVK 504
Query: 1675 NPAT*KSSSKLA----------MAEEVREAITKALQKFLKVSRFC 1779
+ + KS K+A + E REA+ KAL K + + C
Sbjct: 505 HLDSEKSMPKIASGMRRLTKTTITVETREALLKALPKVFQSHKVC 549
>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
gi|550334731|gb|EEE90658.2| hypothetical protein
POPTR_0007s12540g [Populus trichocarpa]
Length = 667
Score = 417 bits (1072), Expect = e-114
Identities = 246/559 (44%), Positives = 332/559 (59%), Gaps = 19/559 (3%)
Frame = +1
Query: 163 MDLDELLDGPSKGPNRPARFAPKGSK----FKPRPKAEPSQSLP------PSASDSMESL 312
MDLD L D PSK P+RFAP K KP+PK EP +S+P PS S++ E
Sbjct: 1 MDLDGL-DEPSKVRKPPSRFAPTSKKPQPKSKPKPKPEPQESVPVGPKPDPSVSNTAEDA 59
Query: 313 PIPKKEELGIKSDIKPEYVNDAIEMDVEVKLG--VKEEEIDDLMXXXXXXXXXXXXXXXX 486
PK ++ K++ N +E+D + + G VKE ++ D+
Sbjct: 60 K-PKIDDTLSKTETGVSNGNVKMEIDAKEERGAAVKENDLMDV------DKEEDEDDVVV 112
Query: 487 XXIDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSK 666
IDVY+TP VDP T+LYV+QYPLRP WRPYELDE C+EVRVKP S EVE+DL++D D+K
Sbjct: 113 REIDVYYTPSVDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSID-DTK 171
Query: 667 NYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESR 846
NYD R+ MKKQ L++ W PP +G+AVGVL GNKL+LNPIH VVQLRPS+ +L S
Sbjct: 172 NYDPDIASRLNMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSG 231
Query: 847 ESKRKTVGSSNVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLKYHGASSD 1026
SK K +S + Q D EE W+PLKYHG+ SD
Sbjct: 232 NSKGKKNATSGEDSN-----EGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLKYHGSKSD 286
Query: 1027 LTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRT 1206
L++RYLQ M A E S I F+M+ DY++SLCPG + + GPS R LL+LPL ER +
Sbjct: 287 LSSRYLQNMVAPESSTIEFAMNPYDYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKR 346
Query: 1207 WLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGT---DQGIAV 1377
LEGPP+HRF AL+HL P++S+E++L VLQ++ ++VQGLWVPK+ L++ + + +
Sbjct: 347 LFLEGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEKVKL 406
Query: 1378 LARDYV-LLFSKNAIIHKSQL--PTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSC 1548
ARDY+ LLFSK+ ++ S+L P +P + + LN+ AVER +FKDWK +E D
Sbjct: 407 AARDYILLLFSKSLVVTPSELNVPMKPLILKSF---LNIFAVERPSFKDWKFKENVDTLF 463
Query: 1549 VKSNPSVVKKQEEEWECLEKRINDHVCGGRNRPGMR-SSNTTNNPAT*KSSSKLAMAEEV 1725
V+ P +V+KQE+ WE + K I+ +R G S N P K M +E
Sbjct: 464 VELYPDIVRKQEQAWEVMGKNIS----AAFDRAGKSVSKNVITKP-------KKTMTDET 512
Query: 1726 REAITKALQKFLKVSRFCR 1782
REA+ KAL K L+ + CR
Sbjct: 513 REALRKALPKVLQTHKVCR 531
>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
Length = 732
Score = 411 bits (1056), Expect = e-112
Identities = 248/568 (43%), Positives = 331/568 (58%), Gaps = 29/568 (5%)
Frame = +1
Query: 163 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPSQSLPPSAS-----DSMESLPIPKK 327
MDLD+L D PS+ P+R +RFAPK SK KP+ K+E + + S ++ ++ P P+
Sbjct: 1 MDLDDL-DAPSQVPSRVSRFAPKFSKLKPKSKSELASAQESLGSVLPKTETGQTAPKPEP 59
Query: 328 EELGIKS----DIKPEYVNDAIEMDVEVKLGVKEE-EIDDLMXXXXXXXXXXXXXXXXXX 492
+E K D KP+ N ++M+V+ G KEE E +D M
Sbjct: 60 QEFEAKKEKEIDAKPKPENGFVKMEVDSAAGAKEEPEENDSMEVEAEEDMVVRE------ 113
Query: 493 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 672
IDV+F P +D T+LYVLQYPLRP WRPYELDE CEEVRVKP S+EVE+DL++DVDSKNY
Sbjct: 114 IDVFFNPKIDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSLDVDSKNY 173
Query: 673 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 852
D R+ M KQ L W P + +AVGVL GNKL+LN IH V+QLRPS++HL S S
Sbjct: 174 DPDCGDRLNMTKQTLCCSWDQPRATRYAVGVLMGNKLHLNRIHAVMQLRPSLKHLISAGS 233
Query: 853 KRKTVGSSNVNDTVK--XXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLKYHGASSD 1026
K+K + DTVK Q EE WVPLKYHG+ S+
Sbjct: 234 KKKNNVKVDAEDTVKLEESSGKKAIGSSKKQIKQENSSVKQKIADEEGWVPLKYHGSESE 293
Query: 1027 LTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRT 1206
+ RYL+KM QE S + F+MS DYLNSLCPG+ KGPS R LL+LPL ER ++
Sbjct: 294 SSVRYLRKMAVQESSPLQFTMSPYDYLNSLCPGSCKNGNEPKGPSRRALLSLPLEERIKS 353
Query: 1207 WLLEG-PPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGT--DQGIAV 1377
L EG PVHRF LKH APD + +E+L LQ+HA +VQGLW PKS L+ GT + G
Sbjct: 354 LLCEGLAPVHRFSVLKHFAPDCTTKEILDALQNHALLVQGLWAPKSSLLLGTSKETGAQR 413
Query: 1378 LARDYV-LLFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSCVK 1554
+ARDYV LLF KN + S L +L A+ LN+L VER + KDWK + D+S +K
Sbjct: 414 IARDYVLLLFWKNPVFSFSSLHFPSSLKTAVNKFLNILGVERPSVKDWKFKGQTDISFIK 473
Query: 1555 SNPSVVKKQEEEWECLEKRINDHVCGGRNRPGMRSSNTTNNPAT*KSSSK---------- 1704
+ P VVKKQEE W LE+ I + G++ G ++++ + P +S+K
Sbjct: 474 NYPDVVKKQEEVWGDLERDIMNMFGDGKSGRGPKNTSIPSRPVKPLNSNKGVPKGTSEVV 533
Query: 1705 --LAMAEEVREAI-TKALQKFLKVSRFC 1779
+ +++RE + +K L K ++ + C
Sbjct: 534 GGKKIPDDIREVLCSKILPKVIQEHKVC 561
>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit RPC5-like [Cucumis sativus]
Length = 702
Score = 404 bits (1037), Expect = e-110
Identities = 245/575 (42%), Positives = 328/575 (57%), Gaps = 36/575 (6%)
Frame = +1
Query: 163 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAE------PSQSL-------PPSASDSM 303
MDLD L +G S+ P+R +RFAPK SKFKP+PK+E P Q L P S + +
Sbjct: 1 MDLDGLDEG-SQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVV 59
Query: 304 E-SLPIPKKEELGIKSDIKPEYV----NDAIEMDVEVKLGVKEEEIDDLMXXXXXXXXXX 468
E + +K+E G + ++KP+ N +MDVE K V+E D M
Sbjct: 60 EPDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEE----DAMVDDDPIEEDA 115
Query: 469 XXXXXXXXIDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLA 648
IDV FTP VD ++LYVLQYPLRP WRPYE + C+EVRVKP++ EVE+DL
Sbjct: 116 SEDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLN 175
Query: 649 VDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSV 828
VD++S NYD+ AD QMKKQ LT+ W+PP + +AVG+L GNKL+LNP+H VVQLRPS
Sbjct: 176 VDIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSF 235
Query: 829 QHLESRESKRK-TVGSSNVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLK 1005
+HL S KRK V + + + + +T+D EE W+PLK
Sbjct: 236 EHLNSGGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRD-EECWIPLK 294
Query: 1006 YHGASSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLP 1185
Y+G SDL+ R+LQ M +Q S + FSMS DY++SLCPG + KGPS ++LL+L
Sbjct: 295 YYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLS 354
Query: 1186 LRERFRTWLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQ 1365
L ER + L EGPPV RF ALKH APD EE + LQ +A++VQGLWVPKS + D
Sbjct: 355 LEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQD- 413
Query: 1366 GIAVLARDYVL-LFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDL 1542
G ARD+VL LFSKN ++ SQ+ +L + + LN+ VER AFKDWK +E D
Sbjct: 414 GSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDR 473
Query: 1543 SCVKSNPSVVKKQEEEWECLEKRIN--------DHVCGGRNRPG--------MRSSNTTN 1674
+ ++ + +KQEE W +EK H +PG + S TT
Sbjct: 474 LFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTT 533
Query: 1675 NPAT*KSSSKLAMAEEVREAITKALQKFLKVSRFC 1779
+ + K AM++E REA+ KALQK + + C
Sbjct: 534 KSSNAPLNRKGAMSDETREALPKALQKLFQNHKVC 568
>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
sativus]
Length = 702
Score = 404 bits (1037), Expect = e-110
Identities = 245/575 (42%), Positives = 328/575 (57%), Gaps = 36/575 (6%)
Frame = +1
Query: 163 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAE------PSQSL-------PPSASDSM 303
MDLD L +G S+ P+R +RFAPK SKFKP+PK+E P Q L P S + +
Sbjct: 1 MDLDGLDEG-SQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVV 59
Query: 304 E-SLPIPKKEELGIKSDIKPEYV----NDAIEMDVEVKLGVKEEEIDDLMXXXXXXXXXX 468
E + +K+E G + ++KP+ N +MDVE K V+E D M
Sbjct: 60 EPDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEE----DAMVDDDPIEEDA 115
Query: 469 XXXXXXXXIDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLA 648
IDV FTP VD ++LYVLQYPLRP WRPYE + C+EVRVKP++ EVE+DL
Sbjct: 116 SEDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLN 175
Query: 649 VDVDSKNYDSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSV 828
VD++S NYD+ AD QMKKQ LT+ W+PP + +AVG+L GNKL+LNP+H VVQLRPS
Sbjct: 176 VDIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSF 235
Query: 829 QHLESRESKRK-TVGSSNVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLK 1005
+HL S KRK V + + + + +T+D EE W+PLK
Sbjct: 236 EHLNSGGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRD-EECWIPLK 294
Query: 1006 YHGASSDLTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLP 1185
Y+G SDL+ R+LQ M +Q S + FSMS DY++SLCPG + KGPS ++LL+L
Sbjct: 295 YYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLS 354
Query: 1186 LRERFRTWLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQ 1365
L ER + L EGPPV RF ALKH APD EE + LQ +A++VQGLWVPKS + D
Sbjct: 355 LEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQD- 413
Query: 1366 GIAVLARDYVL-LFSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDL 1542
G ARD+VL LFSKN ++ SQ+ +L + + LN+ VER AFKDWK +E D
Sbjct: 414 GSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDR 473
Query: 1543 SCVKSNPSVVKKQEEEWECLEKRIN--------DHVCGGRNRPG--------MRSSNTTN 1674
+ ++ + +KQEE W +EK H +PG + S TT
Sbjct: 474 LFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTT 533
Query: 1675 NPAT*KSSSKLAMAEEVREAITKALQKFLKVSRFC 1779
+ + K AM++E REA+ KALQK + + C
Sbjct: 534 KSSNAPLNRKGAMSDETREALPKALQKLFQNHKVC 568
>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao]
Length = 588
Score = 396 bits (1017), Expect = e-107
Identities = 218/446 (48%), Positives = 278/446 (62%), Gaps = 17/446 (3%)
Frame = +1
Query: 493 IDVYFTPFVDPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNY 672
IDV+FTP +D T+LYVLQYPLRP WRPYELDE CEEVRVKP S EVE+DLAVDVDS NY
Sbjct: 28 IDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNY 87
Query: 673 DSGADPRVQMKKQILTALWKPPHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRES 852
DS R++M KQ L++ W PP +G+AVGVL G+KL+LNPIH VVQLRPS+ HL+ S
Sbjct: 88 DSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVS 147
Query: 853 KRKTVGSSNVNDTVK--XXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLKYHGASSD 1026
KRK +++ TVK Q D +E WVPLKYH + +D
Sbjct: 148 KRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKND 207
Query: 1027 LTARYLQKMKAQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRT 1206
+A+YLQ+M A+E +I F+MS DY++SLCPGA S + ++GPS R LL++PL ER +
Sbjct: 208 FSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGA-SNNNKAQGPSRRLLLSIPLEERLKK 266
Query: 1207 WLLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLAR 1386
L EGPP HRF ALKH APD S+E++ VLQ HA +VQGLWVPKS L++ D LAR
Sbjct: 267 LLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDP-YKSLAR 325
Query: 1387 DYV-LLFSKNAIIHKSQL-PTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSCVKSN 1560
DYV LLFSKN II +Q+ P+ + L +LA+ER +FKDWKL+E D K
Sbjct: 326 DYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLY 385
Query: 1561 PSVVKKQEEEWECLEKRINDHVC-GGRNRPGMRSSNTTNNPAT*KSSSK----------- 1704
P +VK QE+ W E + +H+C G + P T P +S K
Sbjct: 386 PDIVKNQEQIWRAGEDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQA 445
Query: 1705 -LAMAEEVREAITKALQKFLKVSRFC 1779
M++E REAI KAL+K + + C
Sbjct: 446 GRTMSDETREAIPKALKKVFQTHKVC 471
>gb|ABU45208.1| unknown [Solanum bulbocastanum]
Length = 654
Score = 389 bits (998), Expect = e-105
Identities = 235/559 (42%), Positives = 314/559 (56%), Gaps = 20/559 (3%)
Frame = +1
Query: 163 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEELGI 342
MDLD DGPSK P+R ARFAPK SK KP+PK+E +LP + + KKEELG
Sbjct: 1 MDLD--FDGPSKVPSRQARFAPKNSKLKPQPKSE---TLPLKVDSDIST----KKEELGS 51
Query: 343 KSDIKPEYVNDAIEMDVEVKLGVKEEEI-DDLMXXXXXXXXXXXXXXXXXXIDVYFTPFV 519
+ ++ + E VE + + E ++L +DV+ TP
Sbjct: 52 QPPLRDHIAKNG-EATVEDDVPLNGETTGNNLAEEQVAMETDSGQDEVVRQVDVWLTPSF 110
Query: 520 DPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQ 699
+ YVLQYPLR WRPY LDE C++VR++P++AE+E+DLA+D DSKN+D +
Sbjct: 111 N---EFYVLQYPLRSEWRPYGLDEKCQDVRLRPSTAEMEVDLAIDFDSKNFDRDSVHAAT 167
Query: 700 MKKQILTALWKP-PHISGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSS 876
+KKQI++ W P + FAVG+L G+KL+LNP+H VVQLRPS+QH + E K T
Sbjct: 168 IKKQIVSTKWVPLSTCADFAVGILIGDKLHLNPVHAVVQLRPSLQHRKESELKNLTTS-- 225
Query: 877 NVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLKYHGASSDLTARYLQKMK 1056
ND KD E W+ LKYHG SD++AR+LQKM
Sbjct: 226 --NDEKTCENEDVKEKKPVGPSKKQNKPPGNYKDIGEHWLHLKYHGTRSDISARHLQKMA 283
Query: 1057 AQEGSQISFSM---------SSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTW 1209
+ GS + FSM DYLN++CP + + R L P ER RTW
Sbjct: 284 IEGGSPVPFSMIPFFRANLMHRGDYLNAICPARPTDIDRLRNLRTR-LSQKPFEERVRTW 342
Query: 1210 LLEGPPVHRFEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARD 1389
LL+GPP+HRF+ALKHLAPD V+E+L VL+ A++VQGLWVPKS LVY T+ G+ VLAR+
Sbjct: 343 LLQGPPIHRFDALKHLAPDNPVDEILEVLKSCAQLVQGLWVPKSSLVYDTNNGVEVLARN 402
Query: 1390 YVLL-FSKNAIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSCVKSNPS 1566
+VL F+KN +I KS RP A VL LAVER DWKL+ELPD
Sbjct: 403 FVLYEFTKNTLIKKSVFGRRPEFLKAATPVLKSLAVERPDLDDWKLKELPDKKFENLYGD 462
Query: 1567 VVKKQEEEWECLEKRINDHVCGGRNRPGMRSSNTTNNPAT*KSSSK--------LAMAEE 1722
VV++Q+ W+ + K+IND + GGRNRP M++ N SS K +M+EE
Sbjct: 463 VVREQQAIWDSMGKQINDILHGGRNRPTMKNPLPKANLPALSSSDKPTPTTFLRTSMSEE 522
Query: 1723 VREAITKALQKFLKVSRFC 1779
+R A+ KALQ ++ + C
Sbjct: 523 IRGALPKALQNIFRIHKVC 541
>ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252245 [Solanum
lycopersicum]
Length = 659
Score = 386 bits (991), Expect = e-104
Identities = 231/551 (41%), Positives = 312/551 (56%), Gaps = 12/551 (2%)
Frame = +1
Query: 163 MDLDELLDGPSKGPNRPARFAPKGSKFKPRPKAEPSQSLPPSASDSMESLPIPKKEELGI 342
MDLD DGPSK P+R ARFAPK SK KP+PK+E +LP + + KKEE
Sbjct: 1 MDLD--FDGPSKVPSRQARFAPKNSKLKPQPKSE---TLPLKVDSEIPT----KKEEFVS 51
Query: 343 KSDIKPEYV-NDAIEMDVEVKLGVKEEEIDDLMXXXXXXXXXXXXXXXXXXIDVYFTPFV 519
+ ++ V N +++ +V L E +DL +DV+ TP
Sbjct: 52 QPPLRDHIVKNGEAKVEDDVLLN-GETTGNDLAEEQVGMETDSDQDEVVREVDVWLTPSA 110
Query: 520 DPKTRLYVLQYPLRPLWRPYELDESCEEVRVKPTSAEVEIDLAVDVDSKNYDSGADPRVQ 699
+ YVLQYPLR WRPY LDE C++VR++P+SAE+E+DLA+D DSKN+D +
Sbjct: 111 N---EFYVLQYPLRSEWRPYGLDERCQDVRLRPSSAEMEVDLAIDFDSKNFDRDSVHAAT 167
Query: 700 MKKQILTALWKPPHI-SGFAVGVLTGNKLYLNPIHTVVQLRPSVQHLESRESKRKTVGSS 876
+KKQI++ W P + FAVG+ G+K +LNP+H +VQLRPS+QH + E K T
Sbjct: 168 IKKQIVSTKWVPSSTCADFAVGIFIGDKFHLNPVHAIVQLRPSLQHRKESELKNLTTS-- 225
Query: 877 NVNDTVKXXXXXXXXXXXXXXXXXXXXXXXQTKDSEEDWVPLKYHGASSDLTARYLQKMK 1056
ND KD E W+ LKYHG SD++AR+LQKM
Sbjct: 226 --NDEKSCENEDVKEKKPVGLSKKQNKLPGNYKDIGEHWLHLKYHGTRSDISARHLQKMA 283
Query: 1057 AQEGSQISFSMSSDDYLNSLCPGAYSGSFSSKGPSIRFLLTLPLRERFRTWLLEGPPVHR 1236
+ GS + FSM DYLN++CP + + R L P ER RTWLLEGPP+HR
Sbjct: 284 MEGGSPVPFSMIPSDYLNAICPARPTDIDRLRNLRTR-LSQKPFEERVRTWLLEGPPIHR 342
Query: 1237 FEALKHLAPDESVEEVLGVLQDHARVVQGLWVPKSPLVYGTDQGIAVLARDYVLL-FSKN 1413
F+ LKHLAPD V+E+L VL+ A++VQGLWV KS LVY T+ G+ VLAR++VL F+K+
Sbjct: 343 FDTLKHLAPDNPVDEILEVLKSCAQLVQGLWVAKSSLVYDTNNGVEVLARNFVLYEFTKS 402
Query: 1414 AIIHKSQLPTRPTLANAMIDVLNVLAVERDAFKDWKLRELPDLSCVKSNPSVVKKQEEEW 1593
+I KS RP A VL LAVER DWKL+ELPD VV++QE W
Sbjct: 403 TLIKKSVFGRRPEFLKAATPVLKSLAVERPDLDDWKLKELPDKKFENLYGDVVREQEAIW 462
Query: 1594 ECLEKRINDHVCGGRNRPGMRS--SNTTNNPAT*KSSS-------KLAMAEEVREAITKA 1746
E + K+IND + GGRNRP +++ + N PA S + +++EE+R A+ KA
Sbjct: 463 ESMGKQINDIMHGGRNRPTLKNPLNPKANIPALSSSDKPTPTTFLRTSLSEEIRGALPKA 522
Query: 1747 LQKFLKVSRFC 1779
LQ ++ + C
Sbjct: 523 LQNVFRIHKVC 533