BLASTX nr result
ID: Rehmannia26_contig00019075
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00019075
(346 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN78145.1| hypothetical protein VITISV_039877 [Vitis vinifera] 82 7e-14
gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris] 81 1e-13
ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi... 81 2e-13
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 78 1e-12
ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266... 76 4e-12
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 76 4e-12
emb|CAN60100.1| hypothetical protein VITISV_021668 [Vitis vinifera] 75 1e-11
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera] 74 2e-11
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 73 3e-11
emb|CAN69999.1| hypothetical protein VITISV_006840 [Vitis vinifera] 73 3e-11
emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera] 73 4e-11
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera] 72 1e-10
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 70 3e-10
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 70 3e-10
gb|AAB82754.1| retrofit [Oryza longistaminata] 70 3e-10
emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera] 70 3e-10
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc... 69 5e-10
emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera] 69 5e-10
ref|XP_004971816.1| PREDICTED: uncharacterized protein LOC101779... 69 6e-10
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [... 69 8e-10
>emb|CAN78145.1| hypothetical protein VITISV_039877 [Vitis vinifera]
Length = 410
Score = 82.0 bits (201), Expect = 7e-14
Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Frame = -1
Query: 346 RIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFV 167
++ +G + I H G + P S I L LLHVP ITKNLLSVS+FA DN+VFF
Sbjct: 250 QVHIGNGMDLSIKHVGQSIFSSPYTSK-ILSLKQLLHVPTITKNLLSVSKFAHDNDVFFE 308
Query: 166 FYPFLCAVKDLNSVTILLKGTLKDGQYNFSLINVN-NTTSITFVSTSYQPI 17
F+ C VKD S T+LL+G LK+G Y F ++ N +S S PI
Sbjct: 309 FHSHSCFVKDQTSKTVLLEGNLKNGLYVFDHTQIHLNQQLQPLLSFSMVPI 359
>gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris]
Length = 1121
Score = 81.3 bits (199), Expect = 1e-13
Identities = 46/111 (41%), Positives = 65/111 (58%)
Frame = -1
Query: 343 IQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFVF 164
++ SG + ISH G+ P S L +LLHVP ITKNLLSVS+F +DNNV F F
Sbjct: 247 VKMGSGKGLFISHIGSANF-LPSTSNKPLFLTDLLHVPSITKNLLSVSKFCRDNNVIFEF 305
Query: 163 YPFLCAVKDLNSVTILLKGTLKDGQYNFSLINVNNTTSITFVSTSYQPIKL 11
+ C V D + +LL+G LKD Y FS ++ ++ S+ +S +PI +
Sbjct: 306 HSNSCYVLDQETKRVLLQGYLKDSLYIFSDLHSLSSCSVHSMSFIAEPISV 356
>ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi|355493153|gb|AES74356.1|
Histone deacetylase [Medicago truncatula]
Length = 1775
Score = 80.9 bits (198), Expect = 2e-13
Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Frame = -1
Query: 343 IQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFVF 164
+ +G + I+ G++ P LNNLL VP ITKNL+SVSQFAKDNNV+F F
Sbjct: 820 VHIGNGQGLAITSVGSLQFTSPLHPQTTLKLNNLLLVPSITKNLVSVSQFAKDNNVYFEF 879
Query: 163 YPFLCAVKDLNSVTILLKGTL-KDGQYNFSLINVNNTTSITFVSTSYQPI 17
+P C VK +S +LL+G L DG Y F N TT++ ++S +
Sbjct: 880 HPNHCFVKSQDSSKVLLRGILGHDGLYQFEHTNSFKTTALVSQNSSVNTV 929
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 78.2 bits (191), Expect = 1e-12
Identities = 42/89 (47%), Positives = 55/89 (61%)
Frame = -1
Query: 346 RIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFV 167
++ +G + I H G P S+ LLN+LLHVP ITKNLLSVS+FAKDN VFF
Sbjct: 397 QVHVGNGTGLSIKHIGQSEF-LSPFSSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFE 455
Query: 166 FYPFLCAVKDLNSVTILLKGTLKDGQYNF 80
F+ C VKD + +L+ G ++DG Y F
Sbjct: 456 FHSDSCFVKDQVTQAVLMVGKVRDGLYAF 484
>ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266915 [Solanum
lycopersicum]
Length = 544
Score = 76.3 bits (186), Expect = 4e-12
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Frame = -1
Query: 346 RIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFV 167
++ +G + I+H G+ + H LN +LHVP ITK+LLSVSQF KDNNVF
Sbjct: 371 QLALGNGQKLSINHIGSSKLSCATRPLH---LNKILHVPSITKSLLSVSQFTKDNNVFME 427
Query: 166 FYPFLCAVKDLNSVTILLKGTLKDGQYNF---SLINVNNTTSITFV 38
F+P C VKD ILL+G++ DG Y F L ++++T FV
Sbjct: 428 FHPSCCFVKDPQG-KILLRGSIDDGLYRFDGGGLPVISSSTPRAFV 472
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 76.3 bits (186), Expect = 4e-12
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = -1
Query: 331 SGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFVFYPFL 152
+G + I H G+ + L LLHVP+ITKNLLSVS+FA DN+VFF F+P
Sbjct: 386 NGKGLPIHHIGHTSFSSSFIPSKTLALKQLLHVPEITKNLLSVSKFAADNHVFFEFHPTS 445
Query: 151 CAVKDLNSVTILLKGTLKDGQYNF 80
C VKD ++ T+L+ G LK G Y F
Sbjct: 446 CFVKDPSTRTVLMHGQLKGGLYVF 469
>emb|CAN60100.1| hypothetical protein VITISV_021668 [Vitis vinifera]
Length = 411
Score = 74.7 bits (182), Expect = 1e-11
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = -1
Query: 346 RIQTASGASMIISHCGNVLIKYPPPST-HIFLLNNLLHVPQITKNLLSVSQFAKDNNVFF 170
+++ +G + I + G L ++ P T +F LN LLHV ITKNLLSVS+F +DNNVFF
Sbjct: 272 QVRVGNGMGIFIKYIG--LSQFSXPFTSQLFSLNXLLHVLXITKNLLSVSKFXRDNNVFF 329
Query: 169 VFYPFLCAVKDLNSVTILLKGTLKDGQYNF 80
F+P C VK S ++L+G LK G Y F
Sbjct: 330 EFHPNFCLVKYQVSKIVVLEGKLKGGLYAF 359
>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
Length = 1007
Score = 74.3 bits (181), Expect = 2e-11
Identities = 42/84 (50%), Positives = 53/84 (63%)
Frame = -1
Query: 277 PPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFVFYPFLCAVKDLNSVTILLKGTLK 98
P S+ IF L +LHVP I NL+SVSQF DNN FF F+P VKD + ILL+G+L+
Sbjct: 78 PSSSKIFQLRQVLHVPDIATNLISVSQFCADNNTFFEFHPRFFFVKDQVTKKILLQGSLE 137
Query: 97 DGQYNFSLINVNNTTSITFVSTSY 26
G Y F V + T+ FVS+SY
Sbjct: 138 HGLYRFPARFVPSPTA--FVSSSY 159
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 73.2 bits (178), Expect = 3e-11
Identities = 44/107 (41%), Positives = 59/107 (55%)
Frame = -1
Query: 346 RIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFV 167
++ +G + I H G P S+ F L +LHVP I NL+SVSQF DNN FF
Sbjct: 406 KVIVGNGKHLRILHTGTTFF---PSSSKTFQLRQVLHVPDIATNLISVSQFCADNNTFFE 462
Query: 166 FYPFLCAVKDLNSVTILLKGTLKDGQYNFSLINVNNTTSITFVSTSY 26
F+P VKD + ILL+G+L+ G Y F V + + FVS+SY
Sbjct: 463 FHPRFFFVKDQVTKKILLQGSLEHGLYRFPARFVPSPAA--FVSSSY 507
>emb|CAN69999.1| hypothetical protein VITISV_006840 [Vitis vinifera]
Length = 432
Score = 73.2 bits (178), Expect = 3e-11
Identities = 40/82 (48%), Positives = 53/82 (64%)
Frame = -1
Query: 325 ASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFVFYPFLCA 146
AS+ I H G + S+ + LN+LLH+P ITKNL VS+FAKDN V+F F+P C
Sbjct: 256 ASLNIKHIGKSSFQ-SQFSSKLLSLNHLLHIPSITKNLPXVSKFAKDNVVYFEFFPNFCY 314
Query: 145 VKDLNSVTILLKGTLKDGQYNF 80
VKD S IL++G +K+G Y F
Sbjct: 315 VKDQXSKEILMEGRVKNGLYVF 336
>emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera]
Length = 424
Score = 72.8 bits (177), Expect = 4e-11
Identities = 41/103 (39%), Positives = 58/103 (56%)
Frame = -1
Query: 343 IQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFVF 164
I +G+ + ISH G+ + P +H F L+N+L VP + +NL+S+SQF K NN F
Sbjct: 318 IMIGNGSGLPISHTGSTSLTTP---SHSFTLSNVLWVPIMKRNLISISQFCKSNNTSIEF 374
Query: 163 YPFLCAVKDLNSVTILLKGTLKDGQYNFSLINVNNTTSITFVS 35
P VKDL++ ILL+G KDG Y + L + I F S
Sbjct: 375 LPSSFHVKDLHTGAILLQGRTKDGVYEWPLSTTQSRPLIAFSS 417
>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
Length = 1112
Score = 71.6 bits (174), Expect = 1e-10
Identities = 41/103 (39%), Positives = 56/103 (54%)
Frame = -1
Query: 343 IQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFVF 164
I G + ISH G+ + P +H F L+N+L VP + +NL+S+SQF K NN F
Sbjct: 185 IMIGDGFGLPISHTGSTSLTTP---SHSFTLSNVLCVPTMKRNLISISQFCKSNNTSIEF 241
Query: 163 YPFLCAVKDLNSVTILLKGTLKDGQYNFSLINVNNTTSITFVS 35
P VKDL++ ILL+G KDG Y + L + I F S
Sbjct: 242 LPSSFHVKDLHTGAILLQGRTKDGVYEWPLSTTQSXPLIAFSS 284
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 70.1 bits (170), Expect = 3e-10
Identities = 37/87 (42%), Positives = 53/87 (60%)
Frame = -1
Query: 346 RIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFV 167
+I TASGA M ISH G+ ++ P + H LNN+L+VPQ KNL+S SQ A DN+ F
Sbjct: 353 QIHTASGAGMDISHIGHTIVHTPSRNIH---LNNVLYVPQAKKNLISASQLAADNSAFLE 409
Query: 166 FYPFLCAVKDLNSVTILLKGTLKDGQY 86
+ ++KD + +LL+G + G Y
Sbjct: 410 LHSKFFSIKDQVTRDVLLEGKCRHGLY 436
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 70.1 bits (170), Expect = 3e-10
Identities = 37/87 (42%), Positives = 53/87 (60%)
Frame = -1
Query: 346 RIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFV 167
+I TASGA M ISH G+ ++ P + H LNN+L+VPQ KNL+S SQ A DN+ F
Sbjct: 353 QIHTASGAGMDISHIGHTIVHTPSRNIH---LNNVLYVPQAKKNLISASQLAADNSAFLE 409
Query: 166 FYPFLCAVKDLNSVTILLKGTLKDGQY 86
+ ++KD + +LL+G + G Y
Sbjct: 410 LHSKFFSIKDQVTRDVLLEGKCRHGLY 436
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 70.1 bits (170), Expect = 3e-10
Identities = 37/87 (42%), Positives = 53/87 (60%)
Frame = -1
Query: 346 RIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFV 167
+I TASGA M ISH G+ ++ P + H LNN+L+VPQ KNL+S SQ A DN+ F
Sbjct: 349 QIHTASGAGMDISHIGHTIVHTPSRNIH---LNNVLYVPQAKKNLISASQLAADNSAFLE 405
Query: 166 FYPFLCAVKDLNSVTILLKGTLKDGQY 86
+ ++KD + +LL+G + G Y
Sbjct: 406 LHSKFFSIKDQVTRDVLLEGKCRHGLY 432
>emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]
Length = 1394
Score = 70.1 bits (170), Expect = 3e-10
Identities = 43/109 (39%), Positives = 63/109 (57%)
Frame = -1
Query: 346 RIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFV 167
++ G S+ I + GN + + +F LN +LHVPQ++ NL+SVS+F DN VFF
Sbjct: 379 QVTIGDGHSLPILNTGNKSFFF---HSKVFCLNQVLHVPQLSTNLISVSKFCTDNAVFFE 435
Query: 166 FYPFLCAVKDLNSVTILLKGTLKDGQYNFSLINVNNTTSITFVSTSYQP 20
F+ VKD + LLKG L+DG Y F +++++ FVSTS P
Sbjct: 436 FHSTHFFVKDQVTKQTLLKGWLRDGLYEFP----SSSSTHAFVSTSSVP 480
>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/89 (42%), Positives = 49/89 (55%)
Frame = -1
Query: 346 RIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFV 167
+I TA+G M I H G+ L+ P H L N+LHVP TKNL+S S+ A+DN VF
Sbjct: 318 KIHTANGVGMQIKHIGHALVH--TPDNHTLHLKNVLHVPHATKNLISASRLAEDNYVFLE 375
Query: 166 FYPFLCAVKDLNSVTILLKGTLKDGQYNF 80
+ VKD I+LKG + G Y F
Sbjct: 376 IHSKYFLVKDRAMRNIILKGRCRKGLYPF 404
>emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera]
Length = 515
Score = 69.3 bits (168), Expect = 5e-10
Identities = 43/106 (40%), Positives = 60/106 (56%)
Frame = -1
Query: 346 RIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFV 167
++ G S+ I H G +P + F LN +LHVP ++ NL+SVS+F DN VFF
Sbjct: 346 QVTIGDGNSLPILHTGTKSFFFPSKT---FSLNQVLHVPHLSTNLISVSKFCMDNAVFFE 402
Query: 166 FYPFLCAVKDLNSVTILLKGTLKDGQYNFSLINVNNTTSITFVSTS 29
F+ VKD + ILLKG L+DG Y FS +++ FV+TS
Sbjct: 403 FHFSYFFVKDQVTKKILLKGWLRDGLYEFS----SSSPPRAFVTTS 444
>ref|XP_004971816.1| PREDICTED: uncharacterized protein LOC101779238, partial [Setaria
italica]
Length = 1281
Score = 68.9 bits (167), Expect = 6e-10
Identities = 36/95 (37%), Positives = 56/95 (58%)
Frame = -1
Query: 343 IQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFVF 164
+Q +GA + I H G+ I +T L N+LH+P I+K+LLS+ + A DN+VFF F
Sbjct: 206 VQVGNGAHLHIMHIGSCSIN---TATRPLALENVLHIPDISKHLLSIHKLAHDNHVFFEF 262
Query: 163 YPFLCAVKDLNSVTILLKGTLKDGQYNFSLINVNN 59
+P+ +KDL ILL+G + G Y L ++ +
Sbjct: 263 HPYHFLIKDLAMRQILLEGKCEAGLYPIKLYDIES 297
>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] gi|31431217|gb|AAP53032.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1042
Score = 68.6 bits (166), Expect = 8e-10
Identities = 36/87 (41%), Positives = 51/87 (58%)
Frame = -1
Query: 346 RIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFV 167
+I TASGA M I H G+ ++ P H LNN+LHVPQ KNL+S ++ A DN+VF
Sbjct: 247 QIHTASGAGMKIKHIGHAIVHTPTRPLH---LNNVLHVPQAAKNLISATKLASDNSVFVE 303
Query: 166 FYPFLCAVKDLNSVTILLKGTLKDGQY 86
+ +KD + + +LKG + G Y
Sbjct: 304 IHSKYFLIKDRTTRSTVLKGPRRHGLY 330