BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00018754
         (668 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise...   277   2e-72
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   268   1e-69
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   223   5e-56
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   223   5e-56
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   206   5e-51
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              206   5e-51
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   202   1e-49
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   202   1e-49
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   202   1e-49
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub...   201   1e-49
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   201   1e-49
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no...   199   5e-49
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   198   1e-48
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...   194   2e-47
gb|EMJ12114.1| hypothetical protein PRUPE_ppa000278mg [Prunus pe...   193   3e-47
gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, pu...   193   5e-47
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su...   182   8e-44
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su...   182   8e-44
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su...   182   8e-44
gb|ESW30448.1| hypothetical protein PHAVU_002G153700g [Phaseolus...   180   3e-43

>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
          Length = 1380

 Score =  277 bits (708), Expect = 2e-72
 Identities = 137/225 (60%), Positives = 169/225 (75%), Gaps = 3/225 (1%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LNAKGL  QRK  ++ SPF+QA F NPSD  VKAAK  Q D L GS+EALSWGQTP +GT
Sbjct: 1154 LNAKGLVNQRKEIDIRSPFNQATFLNPSDTFVKAAKACQTDDLVGSVEALSWGQTPRIGT 1213

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSH-FNTKTRKSL 311
            GC FD++Y GKGHE AK  DVY LL +H  R K +   +  S KS    H  NT+  KS 
Sbjct: 1214 GCQFDLIYKGKGHETAKNEDVYGLLISHDGRAKSNVKERSLSMKSSNPLHGINTQQHKSW 1273

Query: 310  LTKMASQ--HFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDKIGT 137
            L ++++   H S +GI+KISQ+LKR+LKEYPM+ +LSGEDKSTA+ ALQFHPRW +KIG+
Sbjct: 1274 LERLSANMNHLSVLGIKKISQKLKRILKEYPMDRQLSGEDKSTALTALQFHPRWPEKIGS 1333

Query: 136  GVLDIKVGRHPDHNETCFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
            G+ +IKVG HP+H +TCF L R+DGTEEDFSY KCI+HALE++AP
Sbjct: 1334 GIQEIKVGLHPEHQQTCFILKRSDGTEEDFSYRKCINHALELVAP 1378


>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  268 bits (685), Expect = 1e-69
 Identities = 130/217 (59%), Positives = 164/217 (75%), Gaps = 4/217 (1%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LNAKGLA+QRK A + SPF QACFSNPSDC +KAAKMGQMD LQGS+++L+WGQTP +GT
Sbjct: 886  LNAKGLAQQRKEATINSPFVQACFSNPSDCFIKAAKMGQMDNLQGSVDSLAWGQTPPIGT 945

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMK---QFSEKSIVSSHFNTKTRK 317
            G  FDI+Y+GKGHEP+KPTDVY+LL++ V   KP + +K   QF+  +  S +  T  RK
Sbjct: 946  GGQFDIIYSGKGHEPSKPTDVYSLLNSQVGFAKPSEKIKLPVQFTSGNDQSQNLKTNGRK 1005

Query: 316  SLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDKIGT 137
              L  M S   +E  IR++S  LKRML EY  + +L GEDK+ A++ALQ+HPRWE+K G 
Sbjct: 1006 RFLAGMKSLRSAEDEIREVSLALKRMLHEYASDCQLRGEDKTLALRALQYHPRWEEKTGA 1065

Query: 136  GVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCI 29
            G ++IKVGRHPDH E+ CFF+V+TDGTEED SY K I
Sbjct: 1066 GTVEIKVGRHPDHKESRCFFVVKTDGTEEDISYRKSI 1102


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Solanum tuberosum]
          Length = 1233

 Score =  223 bits (567), Expect = 5e-56
 Identities = 124/236 (52%), Positives = 159/236 (67%), Gaps = 14/236 (5%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            L+AKGL  QRKAA V SPF QACFSNP D  V+AAKMG  D LQGSLE+L+WG+TPS+GT
Sbjct: 985  LSAKGLTLQRKAAGVISPFMQACFSNPGDSFVRAAKMGLSDNLQGSLESLAWGKTPSIGT 1044

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKP--------DDPM--KQFSEKSIVSSH 338
            G  FDI+Y+GKG+EPA+P DVYTLL  HV    P        D  M  K  + +      
Sbjct: 1045 GSSFDIIYSGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDEDGGMDGKSLARRLDRLDD 1104

Query: 337  FNTKTRKS--LLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFH 164
             N K+ KS   +TK+ S   S   I+K+SQ LK+ML +Y ++ +L+  DK  A+ ALQFH
Sbjct: 1105 LNKKSCKSEWSITKLRS-FISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFH 1163

Query: 163  PRWEDKIGTGV-LDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
            PR  +KIG G   +IK+G H ++ ++ CF LVR+DG+ EDFSY KC+ HALE+IAP
Sbjct: 1164 PRRNEKIGKGAPQEIKIGYHKEYEDSRCFMLVRSDGSVEDFSYRKCMQHALELIAP 1219


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  223 bits (567), Expect = 5e-56
 Identities = 124/236 (52%), Positives = 159/236 (67%), Gaps = 14/236 (5%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            L+AKGL  QRKAA V SPF QACFSNP D  V+AAKMG  D LQGSLE+L+WG+TPS+GT
Sbjct: 1198 LSAKGLTLQRKAAGVISPFMQACFSNPGDSFVRAAKMGLSDNLQGSLESLAWGKTPSIGT 1257

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKP--------DDPM--KQFSEKSIVSSH 338
            G  FDI+Y+GKG+EPA+P DVYTLL  HV    P        D  M  K  + +      
Sbjct: 1258 GSSFDIIYSGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDEDGGMDGKSLARRLDRLDD 1317

Query: 337  FNTKTRKS--LLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFH 164
             N K+ KS   +TK+ S   S   I+K+SQ LK+ML +Y ++ +L+  DK  A+ ALQFH
Sbjct: 1318 LNKKSCKSEWSITKLRS-FISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFH 1376

Query: 163  PRWEDKIGTGV-LDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
            PR  +KIG G   +IK+G H ++ ++ CF LVR+DG+ EDFSY KC+ HALE+IAP
Sbjct: 1377 PRRNEKIGKGAPQEIKIGYHKEYEDSRCFMLVRSDGSVEDFSYRKCMQHALELIAP 1432


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  206 bits (524), Expect = 5e-51
 Identities = 114/237 (48%), Positives = 153/237 (64%), Gaps = 15/237 (6%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LNAKG+A Q++  ++ SPF Q CFS+P  C +KA K    D L GSL+AL+WG+ PSVG+
Sbjct: 1239 LNAKGMARQKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGS 1298

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLL----STHVARTKPDDPM-------KQFSEKSIVSS 341
            G HFDI+Y+ KGHE A+P D+Y LL    S H    K   P+       K  ++    + 
Sbjct: 1299 GGHFDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANG 1358

Query: 340  HFNTKTRKSL--LTKMASQHFSEVG-IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQ 170
               +K  KSL  ++K   + F  +  I+K+S+RLK +L++YP+N +LS  DK+T + AL 
Sbjct: 1359 DSASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALY 1418

Query: 169  FHPRWEDKIGTGVLDIKVGRHPD-HNETCFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
            FHPR ++KIG G  +IKV  H   HN  CF LVRTDGTEEDFSY+KC+H ALEII P
Sbjct: 1419 FHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDP 1475


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  206 bits (524), Expect = 5e-51
 Identities = 114/237 (48%), Positives = 153/237 (64%), Gaps = 15/237 (6%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LNAKG+A Q++  ++ SPF Q CFS+P  C +KA K    D L GSL+AL+WG+ PSVG+
Sbjct: 1097 LNAKGMARQKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGS 1156

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLL----STHVARTKPDDPM-------KQFSEKSIVSS 341
            G HFDI+Y+ KGHE A+P D+Y LL    S H    K   P+       K  ++    + 
Sbjct: 1157 GGHFDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANG 1216

Query: 340  HFNTKTRKSL--LTKMASQHFSEVG-IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQ 170
               +K  KSL  ++K   + F  +  I+K+S+RLK +L++YP+N +LS  DK+T + AL 
Sbjct: 1217 DSASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALY 1276

Query: 169  FHPRWEDKIGTGVLDIKVGRHPD-HNETCFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
            FHPR ++KIG G  +IKV  H   HN  CF LVRTDGTEEDFSY+KC+H ALEII P
Sbjct: 1277 FHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDP 1333


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
            isoform X3 [Citrus sinensis]
            gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1-like isoform X4 [Citrus
            sinensis]
          Length = 1443

 Score =  202 bits (513), Expect = 1e-49
 Identities = 109/235 (46%), Positives = 149/235 (63%), Gaps = 13/235 (5%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LNAKGLA QRK ++V SPF QA FSNP    +KAAK G +D LQGS++AL WG+ PSVGT
Sbjct: 1194 LNAKGLALQRKHSSVSSPFVQAFFSNPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGT 1253

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLL 308
            G HFDI+Y+G+G   +KP DVY LLST V+ +K ++ +K    + ++S     K      
Sbjct: 1254 GGHFDIIYSGEGRTLSKPVDVYNLLSTPVS-SKQNEKLKVCKAQGLISDKCGAKFGDFAF 1312

Query: 307  TKMASQHFSEVG------------IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFH 164
              + +  F  +             + ++S  LK++L +Y +  +LS +DK+T I+AL FH
Sbjct: 1313 KGLGNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFH 1372

Query: 163  PRWEDKIGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
            PR  +K+G    DI+V  HP+H N  CF LVR DG+ EDFSY+KC+  ALEIIAP
Sbjct: 1373 PRRNEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVIGALEIIAP 1427


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Citrus sinensis]
          Length = 1481

 Score =  202 bits (513), Expect = 1e-49
 Identities = 109/235 (46%), Positives = 149/235 (63%), Gaps = 13/235 (5%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LNAKGLA QRK ++V SPF QA FSNP    +KAAK G +D LQGS++AL WG+ PSVGT
Sbjct: 1232 LNAKGLALQRKHSSVSSPFVQAFFSNPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGT 1291

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLL 308
            G HFDI+Y+G+G   +KP DVY LLST V+ +K ++ +K    + ++S     K      
Sbjct: 1292 GGHFDIIYSGEGRTLSKPVDVYNLLSTPVS-SKQNEKLKVCKAQGLISDKCGAKFGDFAF 1350

Query: 307  TKMASQHFSEVG------------IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFH 164
              + +  F  +             + ++S  LK++L +Y +  +LS +DK+T I+AL FH
Sbjct: 1351 KGLGNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFH 1410

Query: 163  PRWEDKIGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
            PR  +K+G    DI+V  HP+H N  CF LVR DG+ EDFSY+KC+  ALEIIAP
Sbjct: 1411 PRRNEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVIGALEIIAP 1465


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
            gi|557542783|gb|ESR53761.1| hypothetical protein
            CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  202 bits (513), Expect = 1e-49
 Identities = 109/235 (46%), Positives = 149/235 (63%), Gaps = 13/235 (5%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LNAKGLA QRK ++V SPF QA FSNP    +KAAK G +D LQGS++AL WG+ PSVGT
Sbjct: 1194 LNAKGLALQRKHSSVSSPFVQAFFSNPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGT 1253

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLL 308
            G HFDI+Y+G+G   +KP DVY LLST V+ +K ++ +K    + ++S     K      
Sbjct: 1254 GGHFDIIYSGEGRTLSKPVDVYNLLSTPVS-SKQNEKLKVCKAQGLISDKCGAKFGDFAF 1312

Query: 307  TKMASQHFSEVG------------IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFH 164
              + +  F  +             + ++S  LK++L +Y +  +LS +DK+T I+AL FH
Sbjct: 1313 KGLGNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFH 1372

Query: 163  PRWEDKIGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
            PR  +K+G    DI+V  HP+H N  CF LVR DG+ EDFSY+KC+  ALEIIAP
Sbjct: 1373 PRRNEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVIGALEIIAP 1427


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
            lycopersicum]
          Length = 1446

 Score =  201 bits (512), Expect = 1e-49
 Identities = 116/244 (47%), Positives = 148/244 (60%), Gaps = 22/244 (9%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            L+AKGL  QRKAA V SPF QACF+NP D  V+AAKMG  D LQGSLE+L+WG+TPS+GT
Sbjct: 1198 LSAKGLTLQRKAAGVVSPFMQACFTNPGDSFVRAAKMGLSDDLQGSLESLAWGKTPSIGT 1257

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKPD--------------------DPMKQ 368
            G  FDI+Y+GKG+E A+  +VYTLL   V    P+                    D +  
Sbjct: 1258 GSSFDIMYSGKGYELAEQINVYTLLRNLVTVDTPNVKVTLGKDGGMDGMSLVRRLDRLDD 1317

Query: 367  FSEKSIVSSHFNTKTRKSLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKST 188
              +KS  S    TK R          +FS   I+K+SQ LK+ML +Y +  +L+  DK  
Sbjct: 1318 LDKKSCKSELSFTKLR---------SYFSFNDIKKLSQSLKQMLSKYDIGRELNEADKCL 1368

Query: 187  AIKALQFHPRWEDKIGTGV-LDIKVGRHPD-HNETCFFLVRTDGTEEDFSYNKCIHHALE 14
            A+ ALQFHPR  +KIG G   +IK+G H +     CF +VR+D T EDFSY KC+ HALE
Sbjct: 1369 AMMALQFHPRRNEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTVEDFSYRKCMQHALE 1428

Query: 13   IIAP 2
            +IAP
Sbjct: 1429 LIAP 1432


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  201 bits (512), Expect = 1e-49
 Identities = 116/244 (47%), Positives = 148/244 (60%), Gaps = 22/244 (9%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            L+AKGL  QRKAA V SPF QACF+NP D  V+AAKMG  D LQGSLE+L+WG+TPS+GT
Sbjct: 890  LSAKGLTLQRKAAGVVSPFMQACFTNPGDSFVRAAKMGLSDDLQGSLESLAWGKTPSIGT 949

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKPD--------------------DPMKQ 368
            G  FDI+Y+GKG+E A+  +VYTLL   V    P+                    D +  
Sbjct: 950  GSSFDIMYSGKGYELAEQINVYTLLRNLVTVDTPNVKVTLGKDGGMDGMSLVRRLDRLDD 1009

Query: 367  FSEKSIVSSHFNTKTRKSLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKST 188
              +KS  S    TK R          +FS   I+K+SQ LK+ML +Y +  +L+  DK  
Sbjct: 1010 LDKKSCKSELSFTKLR---------SYFSFNDIKKLSQSLKQMLSKYDIGRELNEADKCL 1060

Query: 187  AIKALQFHPRWEDKIGTGV-LDIKVGRHPD-HNETCFFLVRTDGTEEDFSYNKCIHHALE 14
            A+ ALQFHPR  +KIG G   +IK+G H +     CF +VR+D T EDFSY KC+ HALE
Sbjct: 1061 AMMALQFHPRRNEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTVEDFSYRKCMQHALE 1120

Query: 13   IIAP 2
            +IAP
Sbjct: 1121 LIAP 1124


>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
          Length = 1410

 Score =  199 bits (507), Expect = 5e-49
 Identities = 112/238 (47%), Positives = 148/238 (62%), Gaps = 16/238 (6%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            L  KGLA QR+ A+V +PFSQACFSNP+ C +KAAK    D L G+L+AL+WG  P +GT
Sbjct: 1150 LTPKGLARQREHASVATPFSQACFSNPAACFIKAAKAEVTDGLHGTLDALAWGNIPPLGT 1209

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLL 308
            G  F++V++GKGHE  KP +VY +L+T ++   PD  ++  +E     +H + K    LL
Sbjct: 1210 GGQFELVFSGKGHEVDKPINVYDMLATGIS---PD--VQGVNETPDAKNHRSVKFGALLL 1264

Query: 307  -TKMASQHFSEVGIRK--------------ISQRLKRMLKEYPMNSKLSGEDKSTAIKAL 173
              K  SQ   ++GI K              +S  L ++L +YP+N  L  +DKST + AL
Sbjct: 1265 YDKSVSQGLKKLGISKDRIKKLFKLDDIWILSNALAKILNKYPINQSLDHKDKSTLMIAL 1324

Query: 172  QFHPRWEDKIGTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
             FHPR ++KIGTG  DIKV  HP H  + CF LVR DGT EDFSY KC+  ALEII P
Sbjct: 1325 YFHPRIDEKIGTGFQDIKVAYHPKHQSSRCFVLVRADGTVEDFSYRKCVLGALEIIDP 1382


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  198 bits (503), Expect = 1e-48
 Identities = 109/241 (45%), Positives = 148/241 (61%), Gaps = 19/241 (7%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LN KGL  QR+ A V +PF QACFS+P  C++KAAK G  D L GSL+AL+WG+ PS+GT
Sbjct: 1218 LNVKGLTHQREHALVKTPFMQACFSSPGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGT 1277

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTK------ 326
            G  FDI+Y+GKGHE  KP DVY LL       K +  ++   +K+ +S  ++ +      
Sbjct: 1278 GGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNTKIESL-DKNTISEKYSAQLMLKNG 1336

Query: 325  ------------TRKSLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAI 182
                          KS+L K  + +     I+K+S  L+ +L +Y +N +L+  DKST +
Sbjct: 1337 GSTIKGLKRLDSVSKSILRKFLTLN----DIQKLSFALRTILHKYSLNERLNEVDKSTLM 1392

Query: 181  KALQFHPRWEDKIGTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIA 5
             AL FHP  ++KIG G  DIKVG H  +  T CF L+R+DGT EDFSY+KC+  ALEIIA
Sbjct: 1393 MALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIA 1452

Query: 4    P 2
            P
Sbjct: 1453 P 1453


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1438

 Score =  194 bits (493), Expect = 2e-47
 Identities = 107/232 (46%), Positives = 150/232 (64%), Gaps = 10/232 (4%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LNAKG+ +Q + A+V +PF QACFS P  CLVKAAK+G +D LQGSL+AL+WG TPS+G+
Sbjct: 1193 LNAKGIGQQLEHASVIAPFMQACFSTPGPCLVKAAKVGVVDNLQGSLDALTWGNTPSLGS 1252

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKP------DDPMKQFSEKSIVSSHF-NT 329
            G  FDI+++ KG   +KP  VY LLS+ +  T P       D     S+K +  + + N 
Sbjct: 1253 GGQFDIIFS-KGPVSSKPIKVYDLLSSQII-TNPQNGFEMSDAPIHLSDKFVAPNMYKNG 1310

Query: 328  KTRK--SLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 155
              RK  S+   +  ++ +   I ++SQ LK +L++Y +N +++  DK   +  L+FHP  
Sbjct: 1311 YLRKWESITKSVLRENLTIQDIDRLSQALKNILQKYDVNERINDMDKQVLMMVLRFHPHG 1370

Query: 154  EDKIGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
            + KIG G+ ++KVG HPDH N  CF LVRTDGT ED SY+KCI  A +IIAP
Sbjct: 1371 DRKIGLGIKEVKVGHHPDHENVRCFMLVRTDGTIEDVSYHKCICGAYDIIAP 1422


>gb|EMJ12114.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  193 bits (491), Expect = 3e-47
 Identities = 105/228 (46%), Positives = 150/228 (65%), Gaps = 6/228 (2%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LNAKG+A+Q+   +V SPF QACFS+P  C +KAAK G +D L GS+EAL+WG TP  GT
Sbjct: 1114 LNAKGIAQQKGHTSVSSPFVQACFSSPGACFIKAAKGGVVDELHGSVEALAWGNTPPSGT 1173

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKPD--DPMKQFS---EKSIVSSHFNTKT 323
            G  FDI+Y+ +G   +KP + Y LL + ++ ++ +  +  K ++   +K  V+S    + 
Sbjct: 1174 GRQFDILYSKEGLNLSKPLNPYDLLGSQISSSRENAFETSKAWNNTLDKCDVTS-IGLEK 1232

Query: 322  RKSLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDKI 143
             +S+   +  ++ +   I+K +Q LKR+L++Y +N  L+  DKS    AL FHP   DK+
Sbjct: 1233 SESVFKSVIRKYLTINDIQKWTQTLKRILRKYDINESLTEGDKSILKMALHFHPHKVDKM 1292

Query: 142  GTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
            G+GV DIKVG+HP H N  CF LVR D TEEDFSY+KC+  ALEI+AP
Sbjct: 1293 GSGVQDIKVGQHPKHENARCFMLVRIDRTEEDFSYHKCVLGALEIVAP 1340


>gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao]
          Length = 1484

 Score =  193 bits (490), Expect = 5e-47
 Identities = 107/237 (45%), Positives = 149/237 (62%), Gaps = 15/237 (6%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LN+KGL +QR+ A V SPF QACFSNPS   VKAAK G  D LQG+++AL+WG+ P +GT
Sbjct: 1232 LNSKGLRQQREHAYVSSPFMQACFSNPSASFVKAAKTGASDDLQGTIDALAWGRIPHIGT 1291

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFN-------- 332
            G  FDI+Y+ K    A+P DVY LL + ++  K D   +     +  S  +         
Sbjct: 1292 GGQFDIIYSVKDQRLAEPVDVYKLLGSSISSQKQDVEFEVPKALNFKSEKYGSLLIDALG 1351

Query: 331  ---TKTRKSLLTKMAS---QHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQ 170
               ++  K + TK  S   +  +   I+++S+ L+ +L +YP++ +LS  D +T + AL 
Sbjct: 1352 DSASEELKKIETKRRSIWRELLTLDDIQRLSRALRNILHKYPIDHRLSEADWNTLMMALY 1411

Query: 169  FHPRWEDKIGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
            FHPR ++KIG+G  +IKVG HP+H N  CF LVRTDGT  DFSY+KC+  ALEIIAP
Sbjct: 1412 FHPRRDEKIGSGAQEIKVGYHPEHANARCFSLVRTDGTIVDFSYHKCVLGALEIIAP 1468


>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
            [Glycine max]
          Length = 1381

 Score =  182 bits (462), Expect = 8e-44
 Identities = 101/234 (43%), Positives = 140/234 (59%), Gaps = 12/234 (5%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LNAKG+A QRK A+V SPF QACF+NP  C +KAAK G  D LQGSL+ L+WG   S+GT
Sbjct: 1137 LNAKGMALQRKHASVSSPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGT 1196

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLL-----------STHVARTKPDDPMKQFSEKSIVSS 341
               FD++Y+ KGH+ AK  DVY LL            TH+ +   D    +F  K+  + 
Sbjct: 1197 SGMFDVIYSEKGHQVAKSVDVYELLEASFDKPNNKIGTHLHKYSSDKCGSEFRHKNGYAL 1256

Query: 340  HFNTKTRKSLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHP 161
                K  K++L    + +     I+K++   + +L +Y ++  LS  D+ST ++ L FHP
Sbjct: 1257 K-EGKQWKTILRNFVTVN----DIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHP 1311

Query: 160  RWEDKIGTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
               +K G G  DIKVG HP + ++ CF ++RTDGT EDFSY KCI  AL+I+ P
Sbjct: 1312 HKSEKFGIGPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDP 1365


>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Glycine max]
          Length = 1457

 Score =  182 bits (462), Expect = 8e-44
 Identities = 101/234 (43%), Positives = 140/234 (59%), Gaps = 12/234 (5%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LNAKG+A QRK A+V SPF QACF+NP  C +KAAK G  D LQGSL+ L+WG   S+GT
Sbjct: 1213 LNAKGMALQRKHASVSSPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGT 1272

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLL-----------STHVARTKPDDPMKQFSEKSIVSS 341
               FD++Y+ KGH+ AK  DVY LL            TH+ +   D    +F  K+  + 
Sbjct: 1273 SGMFDVIYSEKGHQVAKSVDVYELLEASFDKPNNKIGTHLHKYSSDKCGSEFRHKNGYAL 1332

Query: 340  HFNTKTRKSLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHP 161
                K  K++L    + +     I+K++   + +L +Y ++  LS  D+ST ++ L FHP
Sbjct: 1333 K-EGKQWKTILRNFVTVN----DIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHP 1387

Query: 160  RWEDKIGTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
               +K G G  DIKVG HP + ++ CF ++RTDGT EDFSY KCI  AL+I+ P
Sbjct: 1388 HKSEKFGIGPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDP 1441


>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Glycine max]
          Length = 1458

 Score =  182 bits (462), Expect = 8e-44
 Identities = 101/234 (43%), Positives = 140/234 (59%), Gaps = 12/234 (5%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LNAKG+A QRK A+V SPF QACF+NP  C +KAAK G  D LQGSL+ L+WG   S+GT
Sbjct: 1214 LNAKGMALQRKHASVSSPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGT 1273

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLL-----------STHVARTKPDDPMKQFSEKSIVSS 341
               FD++Y+ KGH+ AK  DVY LL            TH+ +   D    +F  K+  + 
Sbjct: 1274 SGMFDVIYSEKGHQVAKSVDVYELLEASFDKPNNKIGTHLHKYSSDKCGSEFRHKNGYAL 1333

Query: 340  HFNTKTRKSLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHP 161
                K  K++L    + +     I+K++   + +L +Y ++  LS  D+ST ++ L FHP
Sbjct: 1334 K-EGKQWKTILRNFVTVN----DIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHP 1388

Query: 160  RWEDKIGTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
               +K G G  DIKVG HP + ++ CF ++RTDGT EDFSY KCI  AL+I+ P
Sbjct: 1389 HKSEKFGIGPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDP 1442


>gb|ESW30448.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1464

 Score =  180 bits (457), Expect = 3e-43
 Identities = 104/231 (45%), Positives = 141/231 (61%), Gaps = 9/231 (3%)
 Frame = -2

Query: 667  LNAKGLAEQRKAANVCSPFSQACFSNPSDCLVKAAKMGQMDRLQGSLEALSWGQTPSVGT 488
            LNAKG+A+QR+ A+V SPF QACFSNP    +KAAK    D LQGSL+AL+WG  PS+GT
Sbjct: 1210 LNAKGMAQQRQHASVSSPFVQACFSNPGRSFIKAAKSELTDNLQGSLDALAWGNCPSMGT 1269

Query: 487  GCHFDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPM---KQFSEKSIVSSHFNTKT-- 323
               FDI+Y+ KGHE  K  DVY LL    +  KP++ +      +      S F  K   
Sbjct: 1270 SGLFDIIYSEKGHEVDKAVDVYKLL--EASFDKPNNKIGFHAHNNSSGKCGSEFRHKNGY 1327

Query: 322  --RKSLLTKMASQHFSEVG-IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWE 152
              ++    K   ++F  V  I+K++   + +L +Y ++  LS  D+ST ++ L FHPR  
Sbjct: 1328 AFKEGKQWKNILRNFVTVNDIQKLTTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRS 1387

Query: 151  DKIGTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSYNKCIHHALEIIAP 2
            +K+G G  DIKVG HP   ++ CF +VRTDGT EDFSY KCI  ALE++ P
Sbjct: 1388 EKLGIGPQDIKVGWHPKFKDSRCFHIVRTDGTVEDFSYRKCILRALEVVDP 1438