BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00018653
         (1170 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II tra...   484   e-134
ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II tra...   483   e-134
ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like...   456   e-126
emb|CBI29242.3| unnamed protein product [Vitis vinifera]              450   e-124
gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus...   444   e-122
ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II tra...   442   e-121
ref|XP_002304389.1| DNA helicase family protein [Populus trichoc...   441   e-121
ref|XP_006471563.1| PREDICTED: mediator of RNA polymerase II tra...   439   e-120
ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II tra...   439   e-120
ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II tra...   438   e-120
ref|XP_003534325.1| PREDICTED: mediator of RNA polymerase II tra...   438   e-120
ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus commun...   437   e-120
ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family prote...   437   e-120
gb|EOY25440.1| RECQ helicase L2 isoform 1 [Theobroma cacao]           427   e-117
ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [A...   424   e-116
ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II tra...   421   e-115
ref|NP_001077639.1| mediator of RNA polymerase II transcription ...   407   e-111
ref|NP_174421.2| mediator of RNA polymerase II transcription sub...   407   e-111
ref|XP_006306861.1| hypothetical protein CARUB_v10008406mg [Caps...   407   e-111
ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata] gi...   406   e-110

>ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like [Solanum tuberosum]
          Length = 706

 Score =  484 bits (1245), Expect = e-134
 Identities = 255/369 (69%), Positives = 286/369 (77%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD DV+ARERVH RWSNGKLQVI+GTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA
Sbjct: 345  ADMDVNARERVHLRWSNGKLQVIVGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 404

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSEC+L+FRPAD PRQSSMVFYENSGL+NLYDIVRYC SKR+CRR AFFRHFAEP
Sbjct: 405  GRDGLPSECVLFFRPADAPRQSSMVFYENSGLKNLYDIVRYCQSKRECRRSAFFRHFAEP 464

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQ+CNGMCDNCA  NE+ ELDVS HAK IVS L+++QENDQRVTMLQLV+          
Sbjct: 465  LQECNGMCDNCAFSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQLVE--KLKVKQKN 522

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHTAYATNAYVT+GPLAKQVL G KI+K+E+  
Sbjct: 523  LGPDLKKDELEQLVIKLVLDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVEMST 582

Query: 449  GQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKSM 270
             Q  +S++  + KR +S+ L+ KLDELRKELAS+ GGIFPHSVLSTQQI TLS  KPKS+
Sbjct: 583  RQSRTSSSMKSSKRERSTGLDDKLDELRKELASIHGGIFPHSVLSTQQISTLSGQKPKSI 642

Query: 269  EELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEALV 90
            EELEKIIGKLK+EKYG RIL+EI  YES+              + G  VKKLKT+K ALV
Sbjct: 643  EELEKIIGKLKTEKYGDRILEEIVSYESD----PQKDADGSKETKGNTVKKLKTKK-ALV 697

Query: 89   VIESSGDET 63
            V+ESS DET
Sbjct: 698  VLESSEDET 706


>ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like [Solanum lycopersicum]
          Length = 708

 Score =  483 bits (1243), Expect = e-134
 Identities = 255/369 (69%), Positives = 285/369 (77%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD DV+ARERVH RWSNGKLQVI+GTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA
Sbjct: 345  ADMDVNARERVHLRWSNGKLQVIVGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 404

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSEC+L+FRPAD PRQSSMVFYENSGL+NLYDIVRYC SKR+CRR AFFRHFAEP
Sbjct: 405  GRDGLPSECVLFFRPADAPRQSSMVFYENSGLKNLYDIVRYCQSKRECRRSAFFRHFAEP 464

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQ+CNGMCDNCA  NE+ ELDVS HAK IVS L+++QENDQRVTMLQLV+          
Sbjct: 465  LQECNGMCDNCAFSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQLVE-KLKVKQKNL 523

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHTAYATNAYVT+GPLAKQVL G KI+K+E+  
Sbjct: 524  GPDLKKDELEQLVIKLLRASVLHKEEFQHTAYATNAYVTVGPLAKQVLQGNKIIKVELST 583

Query: 449  GQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKSM 270
             Q  +S++  + KR +S+ L  KLDELRKELAS+ GGIFPHSVLSTQQI TLSA KPKS+
Sbjct: 584  RQTRTSSSMKSSKRERSTGLNDKLDELRKELASIHGGIFPHSVLSTQQISTLSAQKPKSI 643

Query: 269  EELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEALV 90
            EELEKIIGKLK+EKYG RIL+EI  YES+              + G  VKKLKT+K  LV
Sbjct: 644  EELEKIIGKLKTEKYGGRILEEIASYESD---PQKNNADGSKETKGNTVKKLKTKK-TLV 699

Query: 89   VIESSGDET 63
            V+ESS DET
Sbjct: 700  VLESSEDET 708


>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis vinifera]
          Length = 711

 Score =  456 bits (1173), Expect = e-126
 Identities = 245/370 (66%), Positives = 274/370 (74%), Gaps = 1/370 (0%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD DV+ARERVH RWSN KLQVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 345  ADMDVNARERVHLRWSNSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 404

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSECLLYFRP DVPRQSSMVFYENSGLQNLYDIV+YC SKR+CRR AFFRHFAEP
Sbjct: 405  GRDGLPSECLLYFRPGDVPRQSSMVFYENSGLQNLYDIVQYCQSKRECRRNAFFRHFAEP 464

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQDCNGMCDNCA   E+ E+DVS  AK+++S LQ+MQ+NDQR+TMLQ+VD          
Sbjct: 465  LQDCNGMCDNCAFSTEVKEVDVSCLAKAMISLLQDMQDNDQRLTMLQMVD--KMKVKNKD 522

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHTAYATNAYVT+G L KQV HGK+IVKLEI  
Sbjct: 523  LGSDLRKEEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKLEIST 582

Query: 449  GQKSSSTNSNTHKRG-KSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKS 273
              K+ + N  + KR   SS LE KLDELRKEL+S  GGIFPHSVLSTQQI  LSA KP S
Sbjct: 583  KVKTKTGNMKSSKRSLTSSGLELKLDELRKELSSTHGGIFPHSVLSTQQISILSAQKPTS 642

Query: 272  MEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEAL 93
            + ELE +IGKLK+EKYG +IL+EI  Y                 S  RA K+LK+ K A+
Sbjct: 643  ILELETMIGKLKTEKYGSKILEEIAKYTETEQPENRLKTDEGQGSENRAPKRLKSNK-AV 701

Query: 92   VVIESSGDET 63
            V+IESSGDET
Sbjct: 702  VLIESSGDET 711


>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
          Length = 710

 Score =  450 bits (1157), Expect = e-124
 Identities = 245/371 (66%), Positives = 276/371 (74%), Gaps = 2/371 (0%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD DV+ARERVH RWSN KLQVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 345  ADMDVNARERVHLRWSNSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 404

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSECLLYFRP DVPRQSSMVFYENSGLQNLYDIV+YC SKR+CRR AFFRHFAEP
Sbjct: 405  GRDGLPSECLLYFRPGDVPRQSSMVFYENSGLQNLYDIVQYCQSKRECRRNAFFRHFAEP 464

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQDCNGMCDNCA   E+ E+DVS  AK+++S LQ+MQ+NDQR+TMLQ+VD          
Sbjct: 465  LQDCNGMCDNCAFSTEVKEVDVSCLAKAMISLLQDMQDNDQRLTMLQMVD--KMKVKNKD 522

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHTAYATNAYVT+G L KQV HGK+IVKLEI  
Sbjct: 523  LGSDLRKEEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKLEIST 582

Query: 449  GQKSSSTNSNTHKRG-KSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKS 273
              K+ + N  + KR   SS LE KLDELRKEL+S  GGIFPHSVLSTQQI  LSA KP S
Sbjct: 583  KVKTKTGNMKSSKRSLTSSGLELKLDELRKELSSTHGGIFPHSVLSTQQISILSAQKPTS 642

Query: 272  MEELEKIIGKLKSEKYGPRILKEINDY-ESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEA 96
            + E + +IGKLK+EKYG +IL+EI  Y E+  P            S  RA K+LK+ K A
Sbjct: 643  ILEAKTMIGKLKTEKYGSKILEEIAKYTETEQP--ENVPPDDRQGSENRAPKRLKSNK-A 699

Query: 95   LVVIESSGDET 63
            +V+IESSGDET
Sbjct: 700  VVLIESSGDET 710


>gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus vulgaris]
          Length = 702

 Score =  444 bits (1142), Expect = e-122
 Identities = 234/368 (63%), Positives = 269/368 (73%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD DV AR++VH RWSN KLQVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 343  ADMDVIARQKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 402

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSEC+LYFRP DVPRQSSMVFYENSGLQNLYDIVRYC SK+QCRR AFFRHFAEP
Sbjct: 403  GRDGLPSECILYFRPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKKQCRRSAFFRHFAEP 462

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQ+CNGMCD CA   E+ E+DVS HAK +VS LQ+MQ NDQR TMLQLVD          
Sbjct: 463  LQECNGMCDICAFSREVKEMDVSDHAKLMVSLLQDMQVNDQRSTMLQLVD--KMKIKQKK 520

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHTAYATNAY+ +GPLAKQ+L GKK V LEI+ 
Sbjct: 521  QGSELKREDNEQLILHLLLGRFLKEEFQHTAYATNAYIAVGPLAKQILQGKKSVTLEIYT 580

Query: 449  GQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKSM 270
              ++ +   +  +  +SS LE KLDELRKEL+S  GGI PHSVLST+QI  LS+ KP S+
Sbjct: 581  EHRTKAALRSVKRSLESSDLELKLDELRKELSSAHGGILPHSVLSTEQISLLSSQKPNSL 640

Query: 269  EELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEALV 90
            E+LEK+IGKLK+EKYG RIL++I  Y  +              + GRA K+ KT+K  LV
Sbjct: 641  EQLEKVIGKLKTEKYGNRILQQIEKYSDSE-------LTDKQETDGRAAKRSKTKKN-LV 692

Query: 89   VIESSGDE 66
            +IESS DE
Sbjct: 693  LIESSEDE 700


>ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like [Cicer arietinum]
          Length = 704

 Score =  442 bits (1136), Expect = e-121
 Identities = 236/368 (64%), Positives = 270/368 (73%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD DV+ RE+VH RWSN KLQVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 346  ADMDVNNREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 405

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSECLLYFRP DV RQSSMVFYENSGLQNLYDIVRYC SKRQCRR AFFRHFAEP
Sbjct: 406  GRDGLPSECLLYFRPGDVSRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEP 465

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQ+C+GMCD CA  +E+ E+DVS HAK +VS LQE+Q +DQR TMLQLVD          
Sbjct: 466  LQECDGMCDICAFSSEVKEVDVSRHAKLMVSLLQEIQTSDQRSTMLQLVD--KMKVKQKE 523

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHTAY+TNAY+T+GPLAKQ+L GKK VKLE+  
Sbjct: 524  IGSDLKREEMEQLILHLLLDRALKEEFQHTAYSTNAYITVGPLAKQILQGKKTVKLEVST 583

Query: 449  GQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKSM 270
             +K+ ++       G SS LE KLDELRKEL+S+ GGI PHSVLSTQQI  L + KP S+
Sbjct: 584  EKKTKASVRLKRCLG-SSGLELKLDELRKELSSIHGGILPHSVLSTQQISLLCSQKPNSL 642

Query: 269  EELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEALV 90
            E+LEK+IGKLK+EKYG +IL++I  Y    P              GRA K+ KT+K  LV
Sbjct: 643  EQLEKVIGKLKTEKYGNKILEQIVKYSDFKPTDEQVSD-------GRAAKRSKTKKN-LV 694

Query: 89   VIESSGDE 66
            +IESSGDE
Sbjct: 695  LIESSGDE 702


>ref|XP_002304389.1| DNA helicase family protein [Populus trichocarpa]
            gi|222841821|gb|EEE79368.1| DNA helicase family protein
            [Populus trichocarpa]
          Length = 718

 Score =  441 bits (1134), Expect = e-121
 Identities = 239/374 (63%), Positives = 272/374 (72%), Gaps = 6/374 (1%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD DV+ARE+VHT WS  KLQVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 349  ADMDVNAREKVHTWWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 408

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSEC+L++RPADVPRQSSMVFYENSGLQNLYDIVRYC SKRQCRR AFFRHFAEP
Sbjct: 409  GRDGLPSECVLFYRPADVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRNAFFRHFAEP 468

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQDCNGMCDNCA  +E+ E+DVS HAK +VS LQ+ QE DQR+TMLQLVD          
Sbjct: 469  LQDCNGMCDNCAFLSEVMEVDVSRHAKVMVSLLQDTQEKDQRLTMLQLVDKMKNKKELGS 528

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                    EE+QHTAYATNAYVTIGPLA QVL GKKIVKLEI  
Sbjct: 529  DIKKEEMEQLVIQLILDFVFK---EEYQHTAYATNAYVTIGPLANQVLQGKKIVKLEISS 585

Query: 449  GQKSSSTNSNTHKRGKS-SALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKS 273
             QK+   +  + K   + S LE KLDELR++L+S  GGIFPHSVLS+QQ+  +S+ KP S
Sbjct: 586  KQKNKGDSMKSAKHSLAFSGLELKLDELREKLSSGHGGIFPHSVLSSQQMSMISSQKPSS 645

Query: 272  MEE-----LEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKT 108
             +E     LEKIIGKLK+EKYG +IL EI  Y  + P            S  RA K+LKT
Sbjct: 646  AQEASPYHLEKIIGKLKTEKYGSKILDEIKKYTGSEP-PDNGMLNEEEGSGNRASKRLKT 704

Query: 107  RKEALVVIESSGDE 66
            +K  +VVIESS +E
Sbjct: 705  KK-GIVVIESSDEE 717


>ref|XP_006471563.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like isoform X2 [Citrus sinensis]
          Length = 567

 Score =  439 bits (1129), Expect = e-120
 Identities = 229/368 (62%), Positives = 270/368 (73%), Gaps = 1/368 (0%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD D++ARE+VH RWS  KLQVI+GTVAFGMGINKPDVRFV+HHSLSKS+ETYYQESGRA
Sbjct: 199  ADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRA 258

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSECLL+FRPADVPRQSSMVFYENSGLQNLYDIVRY  SK+QCRR  FFRHFAEP
Sbjct: 259  GRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQSKKQCRRSTFFRHFAEP 318

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQDCNGMCD CA   E+NE+DV+ HA+ I+S LQ++Q+N+QR+TMLQLVD          
Sbjct: 319  LQDCNGMCDICAFSYEVNEVDVTRHAQCIISLLQDIQDNNQRLTMLQLVD--KMKIKLKE 376

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                    EEFQHTAY+TNAYVTIGPLAK VL GKKI+KLEI  
Sbjct: 377  IDSDLKREEIEQLVLQLIIDRVLSEEFQHTAYSTNAYVTIGPLAKLVLQGKKIIKLEISS 436

Query: 449  GQKSSSTNSNTHKRG-KSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKS 273
             QK+++ N  + KR   SSALE++LDELRKELAS+ GGI PHSVLS+Q I  +SA KP +
Sbjct: 437  VQKNTADNKKSTKRSLTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPST 496

Query: 272  MEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEAL 93
            MEELEKIIGKLK+ KYG RIL+ I+   ++                G    K   +++A+
Sbjct: 497  MEELEKIIGKLKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQGRGARASKRTKKEKAV 556

Query: 92   VVIESSGD 69
            VV++SS D
Sbjct: 557  VVVDSSDD 564


>ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like isoform X1 [Citrus sinensis]
          Length = 715

 Score =  439 bits (1129), Expect = e-120
 Identities = 229/368 (62%), Positives = 270/368 (73%), Gaps = 1/368 (0%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD D++ARE+VH RWS  KLQVI+GTVAFGMGINKPDVRFV+HHSLSKS+ETYYQESGRA
Sbjct: 347  ADMDINAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSVETYYQESGRA 406

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSECLL+FRPADVPRQSSMVFYENSGLQNLYDIVRY  SK+QCRR  FFRHFAEP
Sbjct: 407  GRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQSKKQCRRSTFFRHFAEP 466

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQDCNGMCD CA   E+NE+DV+ HA+ I+S LQ++Q+N+QR+TMLQLVD          
Sbjct: 467  LQDCNGMCDICAFSYEVNEVDVTRHAQCIISLLQDIQDNNQRLTMLQLVD--KMKIKLKE 524

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                    EEFQHTAY+TNAYVTIGPLAK VL GKKI+KLEI  
Sbjct: 525  IDSDLKREEIEQLVLQLIIDRVLSEEFQHTAYSTNAYVTIGPLAKLVLQGKKIIKLEISS 584

Query: 449  GQKSSSTNSNTHKRG-KSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKS 273
             QK+++ N  + KR   SSALE++LDELRKELAS+ GGI PHSVLS+Q I  +SA KP +
Sbjct: 585  VQKNTADNKKSTKRSLTSSALEFELDELRKELASISGGILPHSVLSSQLIRLISARKPST 644

Query: 272  MEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEAL 93
            MEELEKIIGKLK+ KYG RIL+ I+   ++                G    K   +++A+
Sbjct: 645  MEELEKIIGKLKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQGRGARASKRTKKEKAV 704

Query: 92   VVIESSGD 69
            VV++SS D
Sbjct: 705  VVVDSSDD 712


>ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like [Fragaria vesca subsp. vesca]
          Length = 708

 Score =  438 bits (1127), Expect = e-120
 Identities = 233/370 (62%), Positives = 271/370 (73%), Gaps = 1/370 (0%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD DV+ARE VH RWS  KLQVIIGTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 347  ADMDVNARENVHMRWSKSKLQVIIGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 406

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPS+CLLYFRPAD+PRQSSMVFYEN GLQNLYDIVRYC SKRQCRR +FFRHFAEP
Sbjct: 407  GRDGLPSQCLLYFRPADMPRQSSMVFYENCGLQNLYDIVRYCQSKRQCRRSSFFRHFAEP 466

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQDCNGMCDNCA  NE+ E+DVS HAK +V+ L+++QEN+QR+T+LQLVD          
Sbjct: 467  LQDCNGMCDNCAFSNEVKEVDVSRHAKLMVTLLKDVQENEQRLTVLQLVD--KIKIKHKE 524

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHTAY+TNAYVT+GPLAKQVL G+  VKLE+  
Sbjct: 525  VGSELKREEIEQLVIQLILGRVLKEEFQHTAYSTNAYVTLGPLAKQVLQGRSSVKLEMST 584

Query: 449  GQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKSM 270
            GQK  +   +  +   SS LE KLDELRKEL+S  GGIFPHSVLSTQQI  +   KP SM
Sbjct: 585  GQKKVAGVRSVKRSRASSCLEQKLDELRKELSSDHGGIFPHSVLSTQQISMIDDQKPNSM 644

Query: 269  EELEKIIGKLKSEKYGPRILKEINDY-ESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEAL 93
            E+LEKIIGK+K+EKYG RIL++++ Y ++  P+              R+ K+LK  +  L
Sbjct: 645  EQLEKIIGKVKTEKYGSRILEQVSMYADAKQPVEDKEEQETER----RSSKRLKNTEPLL 700

Query: 92   VVIESSGDET 63
              IESS DE+
Sbjct: 701  --IESSDDES 708


>ref|XP_003534325.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like isoform X1 [Glycine max]
          Length = 695

 Score =  438 bits (1127), Expect = e-120
 Identities = 232/363 (63%), Positives = 264/363 (72%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD DV+ARE+VH RWSN KLQVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 343  ADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 402

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSECLLYFRP D PRQSSMVFYENSGLQNLYDIVRYCLSKRQCRR AFF HFAEP
Sbjct: 403  GRDGLPSECLLYFRPGDAPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRSAFFHHFAEP 462

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQ+CNGMCD CA  +E+ E+DVSGHAK +VS LQ+MQ NDQR TMLQLVD          
Sbjct: 463  LQECNGMCDICAFSSEVKEVDVSGHAKLMVSLLQDMQANDQRSTMLQLVD--KMKIKQKE 520

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHT YATNAY+ +G LAKQ+L GKK VKLEI+ 
Sbjct: 521  LGSELKREEIEQLILHLLLARFLKEEFQHTPYATNAYIAVGSLAKQILQGKKSVKLEIYT 580

Query: 449  GQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKSM 270
             Q++     +  +   SS LE KLDELRKEL+S  GGI PHSVLST+QI  L++ KP S+
Sbjct: 581  EQRTKDGVRSAKQCLGSSGLELKLDELRKELSSAHGGILPHSVLSTEQIIQLASQKPNSL 640

Query: 269  EELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEALV 90
            E+LEK+IGKL++EKYG RILK+I  Y    P               RA K+LK++K  LV
Sbjct: 641  EQLEKLIGKLRTEKYGNRILKQIEKYYDFEPTDKQEID-------ARAAKRLKSKKN-LV 692

Query: 89   VIE 81
            +IE
Sbjct: 693  IIE 695


>ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
            gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative
            [Ricinus communis]
          Length = 714

 Score =  437 bits (1125), Expect = e-120
 Identities = 232/368 (63%), Positives = 266/368 (72%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD DV+ARE+VH RWS  KLQVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 352  ADMDVNAREKVHMRWSQNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 411

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDG PSEC+L+FRP DVPRQSSMVFYENSGLQNLYDIVRYC SKR CRR AFFRHF+EP
Sbjct: 412  GRDGAPSECVLFFRPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKRTCRRSAFFRHFSEP 471

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQDCNGMCDNCA  NE+ E+DV+ HAK++VS LQ+M +NDQR+TMLQLVD          
Sbjct: 472  LQDCNGMCDNCAFSNEVMEVDVTSHAKTMVSLLQDMHDNDQRLTMLQLVD--KVKNKHKE 529

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHTAYATNAYV  GPLAKQVL G+KIVKLEI  
Sbjct: 530  LGADLKREEIEQLVIQLILDNVFKEEFQHTAYATNAYVKTGPLAKQVLQGRKIVKLEISN 589

Query: 449  GQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKSM 270
             Q      +   +    S LE+KLD+LRKEL++   GI PHSVLS+QQ+  +SA KP S 
Sbjct: 590  KQNKDGKMNKAKRSLMLSGLEFKLDKLRKELSAEHEGILPHSVLSSQQMSMISAQKPNST 649

Query: 269  EELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEALV 90
            EELEKIIGKLK+E+YG RIL+EI  +  +N                R  K+LKT+K+ LV
Sbjct: 650  EELEKIIGKLKTERYGNRILEEIKKFAGSNESDNGILNDEGSKR--RPSKRLKTKKD-LV 706

Query: 89   VIESSGDE 66
            +IESS DE
Sbjct: 707  LIESSDDE 714


>ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
            truncatula] gi|355513912|gb|AES95535.1| ATP-dependent DNA
            helicase RecQ family protein expressed [Medicago
            truncatula]
          Length = 685

 Score =  437 bits (1124), Expect = e-120
 Identities = 237/371 (63%), Positives = 270/371 (72%), Gaps = 3/371 (0%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD DV+ RE+VH RWSN KLQVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 328  ADMDVNDREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 387

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSECLLYFRP DVPRQSSMVFYENSGLQNLYDIVRYC SKRQCRR AFFRHFAEP
Sbjct: 388  GRDGLPSECLLYFRPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEP 447

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQ+CNGMCD CA   E+NE+DVS HAK +VS LQ++Q +DQR TMLQLV+          
Sbjct: 448  LQECNGMCDICAFSCEVNEVDVSRHAKLMVSLLQDIQASDQRSTMLQLVE--KMKTKQKE 505

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHTAY+TNAY+T+GPLAKQ+L GKK VKLEI  
Sbjct: 506  IGSYLKREEMEQLILHLLLERALKEEFQHTAYSTNAYITVGPLAKQILQGKKTVKLEIST 565

Query: 449  GQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKSM 270
             +K+ ++       G SS LE KLDELRKEL+S  GGI PHSVLSTQQI  L + KP S+
Sbjct: 566  EEKTKASARLKRSLG-SSGLELKLDELRKELSSNHGGILPHSVLSTQQISLLCSQKPNSL 624

Query: 269  EELEKIIGKLKSEKYGPRILKEI---NDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKE 99
            EELEK IGKLK+EKYG +IL +I   +D+E  +               GRA K+ KT+K 
Sbjct: 625  EELEKAIGKLKTEKYGNKILAQIVKYSDFELTDEQVND----------GRAAKRSKTKKN 674

Query: 98   ALVVIESSGDE 66
             LV+IE+S DE
Sbjct: 675  -LVLIETSEDE 684


>gb|EOY25440.1| RECQ helicase L2 isoform 1 [Theobroma cacao]
          Length = 709

 Score =  427 bits (1097), Expect = e-117
 Identities = 226/369 (61%), Positives = 263/369 (71%), Gaps = 1/369 (0%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD DV+ARE+VH +WS  KLQVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 344  ADMDVNAREKVHMKWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 403

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSECL++FRPADVPRQSSMVFYE SGLQNLYDIVRYC SKRQC RGAFF+HFAEP
Sbjct: 404  GRDGLPSECLIFFRPADVPRQSSMVFYEKSGLQNLYDIVRYCQSKRQCHRGAFFQHFAEP 463

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQ+CNGMCD+CA  +E+ E+D S  AK ++S + +MQEN+QRVTMLQLVD          
Sbjct: 464  LQECNGMCDSCAFSSEVKEVDASCQAKLMISLVHDMQENNQRVTMLQLVD--RVKNKQKQ 521

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KE+FQHTAYATNAY+T+G  A Q+L GKKIVK+E+  
Sbjct: 522  LDLKLKREELEQLVVQLILDRVLKEDFQHTAYATNAYITVGTSANQILQGKKIVKMEVAG 581

Query: 449  GQKSSSTNSNTHKRGKSSALEYKLDELRKELASL-DGGIFPHSVLSTQQIGTLSANKPKS 273
              K   +   + K G +S LE+KLDELRKELAS  +G IFPHSVLS QQI  +S  KP S
Sbjct: 582  RSKVMDSYRKSIKHGVTSGLEFKLDELRKELASSHNGEIFPHSVLSGQQISIISTKKPSS 641

Query: 272  MEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEAL 93
             EELE IIGKLK+EKYG RIL E+  Y     +              R  KKLKT++E +
Sbjct: 642  TEELEMIIGKLKTEKYGDRILGEVKKYGIAEQLNDNVLEEEQGTEK-RPRKKLKTKEEVV 700

Query: 92   VVIESSGDE 66
            V+ ESS DE
Sbjct: 701  VLTESSNDE 709


>ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [Amborella trichopoda]
            gi|548857895|gb|ERN15693.1| hypothetical protein
            AMTR_s00048p00224070 [Amborella trichopoda]
          Length = 713

 Score =  424 bits (1090), Expect = e-116
 Identities = 228/373 (61%), Positives = 259/373 (69%), Gaps = 5/373 (1%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD D + RERVH RWSN ++QVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 343  ADMDANERERVHLRWSNNRIQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 402

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLP++CLL+FRP DVPRQSSMVFYENSGLQNLYDIVR+C SKR CRR AFF HF EP
Sbjct: 403  GRDGLPADCLLFFRPGDVPRQSSMVFYENSGLQNLYDIVRFCQSKRSCRRNAFFHHFGEP 462

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVD----XXXXXX 642
            LQDCNGMCDNCA   E  E+D S  AK IVS L+EMQENDQR TMLQLVD          
Sbjct: 463  LQDCNGMCDNCAHPTETKEVDASTQAKIIVSLLKEMQENDQRATMLQLVDKLKVNSRGSG 522

Query: 641  XXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKL 462
                                       KEEFQHTAY+TNAYVTIGPL KQ++ GKK+VKL
Sbjct: 523  GATPTIPDLKREELEQLIVQLVLDRVLKEEFQHTAYSTNAYVTIGPLWKQLVQGKKMVKL 582

Query: 461  EIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANK 282
            EI    + S TN    K    + LE KLD+ RKEL+S  GGIFPH+VLSTQQI TLS  +
Sbjct: 583  EISVNSRGSRTNIKAVKCKHLAGLELKLDDFRKELSSCHGGIFPHAVLSTQQISTLSTER 642

Query: 281  PKSMEELEKIIGKLKSEKYGPRILKEINDY-ESNNPMXXXXXXXXXXXSAGRAVKKLKTR 105
            P S+E+LEK+IGK K+EKYG RIL  I  Y E+  P               R  K+ KT+
Sbjct: 643  PDSLEQLEKLIGKTKTEKYGERILDCIRQYVETEVP---NGSVKEGDSIQHRPTKRAKTK 699

Query: 104  KEALVVIESSGDE 66
            K AL+ I++S DE
Sbjct: 700  K-ALINIDTSEDE 711


>ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like isoform X2 [Glycine max]
          Length = 690

 Score =  421 bits (1082), Expect = e-115
 Identities = 227/363 (62%), Positives = 259/363 (71%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD DV+ARE+VH RWSN KLQVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 343  ADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 402

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSECLLYFRP D PRQSSMVFYENSGLQNLYDI     SKRQCRR AFF HFAEP
Sbjct: 403  GRDGLPSECLLYFRPGDAPRQSSMVFYENSGLQNLYDI-----SKRQCRRSAFFHHFAEP 457

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
            LQ+CNGMCD CA  +E+ E+DVSGHAK +VS LQ+MQ NDQR TMLQLVD          
Sbjct: 458  LQECNGMCDICAFSSEVKEVDVSGHAKLMVSLLQDMQANDQRSTMLQLVD--KMKIKQKE 515

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHT YATNAY+ +G LAKQ+L GKK VKLEI+ 
Sbjct: 516  LGSELKREEIEQLILHLLLARFLKEEFQHTPYATNAYIAVGSLAKQILQGKKSVKLEIYT 575

Query: 449  GQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKSM 270
             Q++     +  +   SS LE KLDELRKEL+S  GGI PHSVLST+QI  L++ KP S+
Sbjct: 576  EQRTKDGVRSAKQCLGSSGLELKLDELRKELSSAHGGILPHSVLSTEQIIQLASQKPNSL 635

Query: 269  EELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEALV 90
            E+LEK+IGKL++EKYG RILK+I  Y    P               RA K+LK++K  LV
Sbjct: 636  EQLEKLIGKLRTEKYGNRILKQIEKYYDFEPTDKQEID-------ARAAKRLKSKKN-LV 687

Query: 89   VIE 81
            +IE
Sbjct: 688  IIE 690


>ref|NP_001077639.1| mediator of RNA polymerase II transcription subunit 34 [Arabidopsis
            thaliana] gi|332193226|gb|AEE31347.1| mediator of RNA
            polymerase II transcription subunit 34 [Arabidopsis
            thaliana]
          Length = 580

 Score =  407 bits (1047), Expect = e-111
 Identities = 217/368 (58%), Positives = 259/368 (70%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD D + RE+VH RWS  KLQVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 220  ADMDANMREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 279

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSEC+L+FR ADVPRQSSMVFYE SGLQNLYDIVRYC SK +CRR AFFRHF EP
Sbjct: 280  GRDGLPSECILFFRSADVPRQSSMVFYEYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGEP 339

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
             QDCNGMCDNCA  +E+ E+DVS  +K +VS +QE Q  DQRVTMLQL D          
Sbjct: 340  SQDCNGMCDNCALSSEVKEVDVSDLSKLVVSMVQETQAKDQRVTMLQLGD--KLRNKHKD 397

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHT Y+TNAYVT+GPLA Q+L G+K +K+E   
Sbjct: 398  LIAELKRDEVEHLVIKLIVDSVLKEEFQHTPYSTNAYVTMGPLANQLLQGRKTIKMETSS 457

Query: 449  GQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKSM 270
             Q      S T      S LE KLDELRKE+++ DG I PH+VLSTQQIG++S+ KP S+
Sbjct: 458  RQTKKLKRSITF-----SGLELKLDELRKEISAADGSILPHTVLSTQQIGSISSQKPVSL 512

Query: 269  EELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEALV 90
            +ELE IIGKLK+EKYG RIL+E+  +E+ +              + R  K+ KT+K+ +V
Sbjct: 513  QELESIIGKLKTEKYGDRILEEVMRHEAVSEQLVEDPTKEETCKS-RLRKRAKTQKD-VV 570

Query: 89   VIESSGDE 66
            ++ESSG+E
Sbjct: 571  LVESSGEE 578


>ref|NP_174421.2| mediator of RNA polymerase II transcription subunit 34 [Arabidopsis
            thaliana] gi|75334308|sp|Q9FT73.1|MED34_ARATH RecName:
            Full=Mediator of RNA polymerase II transcription subunit
            34; AltName: Full=ATP-dependent DNA helicase Q-like 2;
            AltName: Full=RecQ-like protein 2; Short=AtRecQ2;
            Short=AtRecQl2 gi|11121445|emb|CAC14866.1| DNA Helicase
            [Arabidopsis thaliana] gi|332193225|gb|AEE31346.1|
            mediator of RNA polymerase II transcription subunit 34
            [Arabidopsis thaliana]
          Length = 705

 Score =  407 bits (1047), Expect = e-111
 Identities = 217/368 (58%), Positives = 259/368 (70%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD D + RE+VH RWS  KLQVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 345  ADMDANMREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 404

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSEC+L+FR ADVPRQSSMVFYE SGLQNLYDIVRYC SK +CRR AFFRHF EP
Sbjct: 405  GRDGLPSECILFFRSADVPRQSSMVFYEYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGEP 464

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
             QDCNGMCDNCA  +E+ E+DVS  +K +VS +QE Q  DQRVTMLQL D          
Sbjct: 465  SQDCNGMCDNCALSSEVKEVDVSDLSKLVVSMVQETQAKDQRVTMLQLGD--KLRNKHKD 522

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHT Y+TNAYVT+GPLA Q+L G+K +K+E   
Sbjct: 523  LIAELKRDEVEHLVIKLIVDSVLKEEFQHTPYSTNAYVTMGPLANQLLQGRKTIKMETSS 582

Query: 449  GQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKSM 270
             Q      S T      S LE KLDELRKE+++ DG I PH+VLSTQQIG++S+ KP S+
Sbjct: 583  RQTKKLKRSITF-----SGLELKLDELRKEISAADGSILPHTVLSTQQIGSISSQKPVSL 637

Query: 269  EELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEALV 90
            +ELE IIGKLK+EKYG RIL+E+  +E+ +              + R  K+ KT+K+ +V
Sbjct: 638  QELESIIGKLKTEKYGDRILEEVMRHEAVSEQLVEDPTKEETCKS-RLRKRAKTQKD-VV 695

Query: 89   VIESSGDE 66
            ++ESSG+E
Sbjct: 696  LVESSGEE 703


>ref|XP_006306861.1| hypothetical protein CARUB_v10008406mg [Capsella rubella]
            gi|482575572|gb|EOA39759.1| hypothetical protein
            CARUB_v10008406mg [Capsella rubella]
          Length = 738

 Score =  407 bits (1046), Expect = e-111
 Identities = 217/364 (59%), Positives = 258/364 (70%), Gaps = 1/364 (0%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD DV+ RE+VH RWS  KLQVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 381  ADMDVNMREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 440

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSEC+L+FR ADVPRQSSMVFYE SGL+NLYDIVRYC SK +CRR AFFRHF EP
Sbjct: 441  GRDGLPSECILFFRSADVPRQSSMVFYEYSGLRNLYDIVRYCQSKTKCRRSAFFRHFGEP 500

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
             QDCNGMCDNCA  +E+ E+DVS  AK +VS +QEMQ  DQRVTMLQL D          
Sbjct: 501  SQDCNGMCDNCALSSEVEEVDVSDLAKLVVSMVQEMQAKDQRVTMLQLGD--KLRNKHKD 558

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHT Y+TNAYVT+GPLA Q+L G+K +K+E   
Sbjct: 559  LSAELKRDEIEHLVIKLIVDSVLKEEFQHTPYSTNAYVTMGPLANQLLQGRKTIKME--- 615

Query: 449  GQKSSSTNSNTHKRGKS-SALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKS 273
               SSS      KR  S S LE KLDELRKE+++ DG I PH+VLSTQQIG++S+ KP S
Sbjct: 616  ---SSSKQIKKSKRSISFSGLELKLDELRKEISAADGNILPHTVLSTQQIGSISSQKPDS 672

Query: 272  MEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEAL 93
            ++ELEKIIGKLK+EKYG RIL+E+  +++ +              + R+ K+ KT  E +
Sbjct: 673  LQELEKIIGKLKTEKYGDRILEEVKRHDAVSEQLVEDPAKGETCKS-RSRKRAKTENEVV 731

Query: 92   VVIE 81
            ++ E
Sbjct: 732  LLDE 735


>ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata] gi|297339688|gb|EFH70105.1|
            RECQL2 [Arabidopsis lyrata subsp. lyrata]
          Length = 704

 Score =  406 bits (1043), Expect = e-110
 Identities = 217/369 (58%), Positives = 262/369 (71%), Gaps = 1/369 (0%)
 Frame = -2

Query: 1169 ADTDVHARERVHTRWSNGKLQVIIGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 990
            AD D + RE+VH RWS  KLQVI+GTVAFGMGINKPDVRFV+HHSLSKSMETYYQESGRA
Sbjct: 344  ADMDANMREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 403

Query: 989  GRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFRHFAEP 810
            GRDGLPSEC+L+FR ADVPRQSSMVFYE SGLQNLYDIVRYC SK +CRR AFFRHF EP
Sbjct: 404  GRDGLPSECILFFRSADVPRQSSMVFYEYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGEP 463

Query: 809  LQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXXXXXXX 630
             QDCNGMCDNCA  +E+ E+DVS  +K +VS +QE Q  DQRVTMLQL D          
Sbjct: 464  SQDCNGMCDNCALSSEVKEVDVSDLSKLVVSMVQETQSKDQRVTMLQLGD--KLRNKHKD 521

Query: 629  XXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVKLEIHC 450
                                   KEEFQHT Y+TNAYVT+GPLA Q+L G+K +K+E   
Sbjct: 522  LSAELKRDEIEHLVIKLIVDSVLKEEFQHTPYSTNAYVTMGPLANQLLQGRKTIKME--- 578

Query: 449  GQKSSSTNSNTHKRGKS-SALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSANKPKS 273
               +SS  +   KR  S S LE  LDELRKE+++ DG I PH+VLSTQQI  +S+ KP S
Sbjct: 579  ---TSSRQTKKPKRSLSFSGLELNLDELRKEISAADGSILPHTVLSTQQISLISSQKPVS 635

Query: 272  MEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTRKEAL 93
            ++ELE IIGKLK+EKYG RIL+E+  +E+ +             ++ R+ K+ KT+K+A 
Sbjct: 636  LQELESIIGKLKTEKYGDRILEEVMRHEAVSEQLVEDPTKEETCNS-RSRKRAKTQKDA- 693

Query: 92   VVIESSGDE 66
            +++ESSG+E
Sbjct: 694  ILVESSGEE 702