BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00018625
         (903 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III s...   226   1e-72
ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III s...   227   2e-72
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...   229   5e-72
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...   230   7e-72
ref|XP_006479590.1| PREDICTED: DNA-directed RNA polymerase III s...   215   4e-66
gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Mor...   204   1e-65
gb|EOX94571.1| RNA polymerase Rpb7 N-terminal domain-containing ...   206   2e-65
gb|EMJ19615.1| hypothetical protein PRUPE_ppa011518mg [Prunus pe...   195   3e-63
ref|XP_006396961.1| hypothetical protein EUTSA_v10028967mg [Eutr...   204   3e-63
ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polype...   201   5e-63
ref|XP_006305915.1| hypothetical protein CARUB_v10011131mg [Caps...   205   9e-63
ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp....   201   2e-62
ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containin...   198   2e-61
ref|XP_004514743.1| PREDICTED: DNA-directed RNA polymerase III s...   190   9e-60
ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III s...   186   3e-58
ref|XP_004515171.1| PREDICTED: DNA-directed RNA polymerase III s...   185   3e-58
ref|XP_006479592.1| PREDICTED: DNA-directed RNA polymerase III s...   215   2e-57
ref|XP_006443913.1| hypothetical protein CICLE_v10023915mg, part...   215   2e-57
gb|ESW06109.1| hypothetical protein PHAVU_010G020200g [Phaseolus...   174   1e-55
ref|XP_003554543.1| PREDICTED: DNA-directed RNA polymerase III s...   172   1e-54

>ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Solanum lycopersicum]
          Length = 193

 Score =  226 bits (576), Expect(2) = 1e-72
 Identities = 105/148 (70%), Positives = 126/148 (85%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LS +EHTLRLPPHLLN PLN+AIKGEL  LF+DKVI  LGL +S+YDIRS+  GF++
Sbjct: 1   MFYLSVLEHTLRLPPHLLNLPLNEAIKGELEGLFVDKVIANLGLGISIYDIRSVDDGFIY 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           P +GASTY V+FRLV+FRPFVGEVISA+LKES  +GLRLSLGFFDDIYVP PLL  P+ S
Sbjct: 61  PSEGASTYKVKFRLVVFRPFVGEVISAKLKESNAEGLRLSLGFFDDIYVPAPLLPDPSRS 120

Query: 609 EPDPGLKDGVRWVWEYDGVNYPIDGTDE 692
           EPDP  K+ VRW+W++D ++YPIDG DE
Sbjct: 121 EPDPENKNQVRWIWKFDELDYPIDGIDE 148



 Score = 74.7 bits (182), Expect(2) = 1e-72
 Identities = 34/55 (61%), Positives = 41/55 (74%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWWV 900
           IRF+VHNVSYP +PL+Q  DS          KPFAPMV+ GS+D+DGLGPISWW+
Sbjct: 149 IRFQVHNVSYPSMPLEQDKDS----------KPFAPMVIKGSLDADGLGPISWWI 193


>ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Solanum tuberosum]
          Length = 193

 Score =  227 bits (579), Expect(2) = 2e-72
 Identities = 106/148 (71%), Positives = 126/148 (85%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LSEIEH LRLPPHLLN PLN+AIKGEL  LF+DKVI  LGL +S+YDIRSI  GF++
Sbjct: 1   MFYLSEIEHKLRLPPHLLNLPLNEAIKGELEGLFVDKVIANLGLIISIYDIRSIDDGFIY 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           P +GASTYTV+FRLV+FRPFVGEVI+A+LKES  +GLRLSLGFFDDIYVP PLL  P+ S
Sbjct: 61  PSEGASTYTVKFRLVVFRPFVGEVITAKLKESKAEGLRLSLGFFDDIYVPAPLLPDPSRS 120

Query: 609 EPDPGLKDGVRWVWEYDGVNYPIDGTDE 692
            PDP  K+ VRW+W++D ++YPIDG DE
Sbjct: 121 APDPENKNQVRWIWKFDELDYPIDGVDE 148



 Score = 73.2 bits (178), Expect(2) = 2e-72
 Identities = 33/55 (60%), Positives = 41/55 (74%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWWV 900
           IRF+VHNVSYP +PL+Q  DS+          PFAPMV+ GS+D+DGLGPISWW+
Sbjct: 149 IRFQVHNVSYPSMPLEQDKDSN----------PFAPMVIKGSLDADGLGPISWWI 193


>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  229 bits (585), Expect(2) = 5e-72
 Identities = 110/148 (74%), Positives = 125/148 (84%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LS IEHTLRLPPHLL+ PLN+AIKGEL SLFLDKVI  LGLC+SVYDIRSI GGFVF
Sbjct: 1   MFYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVIANLGLCISVYDIRSIDGGFVF 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           PGDGASTYTV FRLVMFRPFVGE+I+A+LKES  +GLRLSLGFFDDIY+PV L+ +P H 
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLGFFDDIYIPVHLMPNPCHC 120

Query: 609 EPDPGLKDGVRWVWEYDGVNYPIDGTDE 692
           EP+P  K  V W+W+Y    +PIDG DE
Sbjct: 121 EPNPEKKGQVIWIWDYQEQKFPIDGIDE 148



 Score = 69.3 bits (168), Expect(2) = 5e-72
 Identities = 32/54 (59%), Positives = 39/54 (72%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWW 897
           IRF+V +VSYPPIP++Q           K SKPFAPMV+ GS+D DGLGP+SWW
Sbjct: 149 IRFQVQSVSYPPIPVEQ----------PKESKPFAPMVIMGSLDYDGLGPVSWW 192


>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  230 bits (587), Expect(2) = 7e-72
 Identities = 110/148 (74%), Positives = 125/148 (84%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MFFLS IEHTLRLPPHLL+ PLN+AIKGEL SLFLDKV+  LGLC+SVYDIRSI GGFVF
Sbjct: 1   MFFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVLANLGLCISVYDIRSIDGGFVF 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           PGDGASTYTV FRLVMFRPFVGE+I+A+LKES  +GL+LSLGFFDDIY+PV L+ +P H 
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSLGFFDDIYIPVHLMPNPCHC 120

Query: 609 EPDPGLKDGVRWVWEYDGVNYPIDGTDE 692
           EPDP  K  V W+W+Y    +PIDG DE
Sbjct: 121 EPDPENKSQVIWIWDYQEQKFPIDGLDE 148



 Score = 68.2 bits (165), Expect(2) = 7e-72
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWW 897
           IRF+V +VSYPPIP++Q           K SKPFAPM++ GS+D DGLGP+SWW
Sbjct: 149 IRFQVQSVSYPPIPVEQ----------PKESKPFAPMMIMGSLDYDGLGPVSWW 192


>ref|XP_006479590.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           isoform X1 [Citrus sinensis]
           gi|568851835|ref|XP_006479591.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC8-like isoform X2 [Citrus
           sinensis]
          Length = 192

 Score =  215 bits (547), Expect(2) = 4e-66
 Identities = 101/148 (68%), Positives = 125/148 (84%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LS+IEHTLRLPPHLL  PLN+AIK EL ++FLDKVI  LGLC+S+YDI+ I+GGFV+
Sbjct: 1   MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKVIANLGLCISIYDIKEIEGGFVY 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           PG+GAST+TV+FRLV+FRPFVGE+I+A+LKES  +GLRLSLGFF+DIYVP  LL SP+ S
Sbjct: 61  PGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLGFFEDIYVPSHLLPSPSRS 120

Query: 609 EPDPGLKDGVRWVWEYDGVNYPIDGTDE 692
           EPDP  +  V+W+WE+    Y IDG DE
Sbjct: 121 EPDPYGRYEVKWIWEFGDTKYVIDGLDE 148



 Score = 64.3 bits (155), Expect(2) = 4e-66
 Identities = 30/54 (55%), Positives = 37/54 (68%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWW 897
           I+FRV +V+YP IP++Q   S          KPFAPMV+ GSID DGLGP+SWW
Sbjct: 149 IKFRVLSVNYPSIPIEQAEGS----------KPFAPMVINGSIDYDGLGPVSWW 192


>gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Morus notabilis]
          Length = 200

 Score =  204 bits (518), Expect(2) = 1e-65
 Identities = 94/148 (63%), Positives = 117/148 (79%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LS IEHTLR+PP +L++PL +AIK EL  LFLDKVI  LGLC+SVYDI SI+GGF+F
Sbjct: 1   MFYLSRIEHTLRVPPDILSRPLTEAIKVELEKLFLDKVIANLGLCISVYDIISIEGGFIF 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           PGDGA+TYT  F ++MFRPFVGE+ISA++KES  +GLRL+LGFF+DIY+P   L  P+  
Sbjct: 61  PGDGAATYTAVFTMIMFRPFVGEIISAKVKESDANGLRLTLGFFEDIYIPANFLPDPSRP 120

Query: 609 EPDPGLKDGVRWVWEYDGVNYPIDGTDE 692
           EPDP  +D V W+WE+    Y IDG DE
Sbjct: 121 EPDPRKRDRVTWIWEFGEQKYVIDGEDE 148



 Score = 73.9 bits (180), Expect(2) = 1e-65
 Identities = 33/54 (61%), Positives = 41/54 (75%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWW 897
           IRF+VH+V+YPPIP++Q           K SKPFAPMV+TGS+D DGLGP+SWW
Sbjct: 149 IRFQVHSVNYPPIPVEQ----------PKESKPFAPMVITGSLDCDGLGPVSWW 192


>gb|EOX94571.1| RNA polymerase Rpb7 N-terminal domain-containing protein [Theobroma
           cacao]
          Length = 210

 Score =  206 bits (525), Expect(2) = 2e-65
 Identities = 101/156 (64%), Positives = 123/156 (78%), Gaps = 8/156 (5%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LS IEHTLRLPPHLLN PL++AIK EL +LFLDKVI  LGLC+SVYDIRSIKGGF++
Sbjct: 1   MFYLSLIEHTLRLPPHLLNLPLDEAIKIELEALFLDKVIANLGLCISVYDIRSIKGGFIY 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           PGDGASTYTV FRL++FRPFVGE+I A+LKES  +GLRLSLGFFDDIY+PV LL  P+  
Sbjct: 61  PGDGASTYTVEFRLIVFRPFVGEIIVAKLKESDANGLRLSLGFFDDIYIPVHLLPIPSRF 120

Query: 609 EPDPGLKDGVRWVWEY--------DGVNYPIDGTDE 692
           E DP  ++  RW+W++        +   + IDG D+
Sbjct: 121 ESDPNNRNQGRWIWDFGEAEEAQSEEPRFVIDGMDQ 156



 Score = 70.5 bits (171), Expect(2) = 2e-65
 Identities = 33/54 (61%), Positives = 39/54 (72%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWW 897
           I+FRVH+V YP IPL+Q  +S          KPFAPMV+TGSID DGLGP+SWW
Sbjct: 157 IKFRVHSVIYPSIPLEQPENS----------KPFAPMVITGSIDYDGLGPVSWW 200


>gb|EMJ19615.1| hypothetical protein PRUPE_ppa011518mg [Prunus persica]
          Length = 207

 Score =  195 bits (495), Expect(2) = 3e-63
 Identities = 95/150 (63%), Positives = 114/150 (76%), Gaps = 2/150 (1%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LS IEHTLRLPPHLL+  L DA++GEL  LFLDKVI  LGLC+SV+ I+SIK GF+ 
Sbjct: 1   MFYLSRIEHTLRLPPHLLSLRLEDAVRGELEKLFLDKVIANLGLCISVHSIQSIKDGFIL 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           P DG  T+ V F L+MFRPFVGE+I A+LKEST +GLRLSL FFDDIYVPV LL  P+HS
Sbjct: 61  PNDGHPTFRVEFTLIMFRPFVGEIIVAKLKESTANGLRLSLEFFDDIYVPVHLLPVPSHS 120

Query: 609 EPDPGLKDGVRWVWEY--DGVNYPIDGTDE 692
            PDPG +D V W+W++        IDG D+
Sbjct: 121 VPDPGKRDRVMWIWKFPDSDEELVIDGIDQ 150



 Score = 74.7 bits (182), Expect(2) = 3e-63
 Identities = 34/55 (61%), Positives = 42/55 (76%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWWV 900
           I+F+VH+V++PPIP++Q  DS          KPFAPMVVTGSID DGLGP+SWWV
Sbjct: 151 IKFQVHSVNFPPIPIEQPEDS----------KPFAPMVVTGSIDFDGLGPVSWWV 195


>ref|XP_006396961.1| hypothetical protein EUTSA_v10028967mg [Eutrema salsugineum]
           gi|557097978|gb|ESQ38414.1| hypothetical protein
           EUTSA_v10028967mg [Eutrema salsugineum]
          Length = 204

 Score =  204 bits (518), Expect(2) = 3e-63
 Identities = 94/136 (69%), Positives = 115/136 (84%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF LSE+EHTLR+PPHLLN PL DAIK  L +LFLDKV+  LGLCVS+YDIRS++GGFV 
Sbjct: 1   MFTLSELEHTLRVPPHLLNHPLEDAIKSVLQNLFLDKVLADLGLCVSIYDIRSVEGGFVL 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           PGDGA+TY VRFR+V+FRPFV EVI+A+ KES  +GLRL+LGFF+DIYVP PL+ +PN  
Sbjct: 61  PGDGAATYKVRFRMVVFRPFVTEVIAAKFKESDANGLRLTLGFFEDIYVPAPLIPTPNRC 120

Query: 609 EPDPGLKDGVRWVWEY 656
           EPDP  ++ +RWVWE+
Sbjct: 121 EPDPYNRNQMRWVWEF 136



 Score = 65.9 bits (159), Expect(2) = 3e-63
 Identities = 28/54 (51%), Positives = 38/54 (70%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWW 897
           I+FRV ++SYP +P+++   S          KPFAPMV+TG+ID DGLGP+SWW
Sbjct: 151 IKFRVESISYPTVPIERTEGS----------KPFAPMVITGNIDDDGLGPVSWW 194


>ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polypeptide, putative
           [Ricinus communis] gi|223539824|gb|EEF41404.1|
           DNA-directed RNA polymerase III 25 kD polypeptide,
           putative [Ricinus communis]
          Length = 194

 Score =  201 bits (510), Expect(2) = 5e-63
 Identities = 97/152 (63%), Positives = 118/152 (77%), Gaps = 4/152 (2%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LSEIEHTLRLPP LL+ PL DA+K EL  +FLDKVI  LGLC+SVYD+  I GGF+F
Sbjct: 1   MFYLSEIEHTLRLPPSLLSLPLQDAVKKELEIIFLDKVIANLGLCISVYDVTHIDGGFIF 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           PGDGASTYTVRFR+V+FRPFVGE+I A+LKES  DGLRLSLGFFDDIY+P   L  P++S
Sbjct: 61  PGDGASTYTVRFRIVVFRPFVGEIIVAKLKESNNDGLRLSLGFFDDIYIPSHRLPKPSYS 120

Query: 609 EPDPGLKDGVRWVWEY----DGVNYPIDGTDE 692
           + DP  +    W+WE+    + + + IDG DE
Sbjct: 121 QQDPENRYQAIWIWEFVSEDNKMEFNIDGLDE 152



 Score = 68.2 bits (165), Expect(2) = 5e-63
 Identities = 30/54 (55%), Positives = 38/54 (70%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWW 897
           I+FRV +V YPP+PL+Q+             KPFAPMV+TGSID +GLGP+SWW
Sbjct: 153 IKFRVDSVKYPPVPLEQQE------------KPFAPMVITGSIDDEGLGPVSWW 194


>ref|XP_006305915.1| hypothetical protein CARUB_v10011131mg [Capsella rubella]
           gi|482574626|gb|EOA38813.1| hypothetical protein
           CARUB_v10011131mg [Capsella rubella]
          Length = 199

 Score =  205 bits (521), Expect(2) = 9e-63
 Identities = 96/144 (66%), Positives = 119/144 (82%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LSE+EH+LR+PPHLLN PL DAIK  L ++FLDKV+  LGLCVSVYDI+SI+GG V 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLVDLGLCVSVYDIKSIEGGIVL 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           PGDGA+TY V FR+V+FRPFVGEVI+A+ KES  +GLRL+LGFF+DIYVPVPL+ +PN  
Sbjct: 61  PGDGAATYKVVFRIVVFRPFVGEVIAAKFKESDTNGLRLTLGFFEDIYVPVPLIPTPNRC 120

Query: 609 EPDPGLKDGVRWVWEYDGVNYPID 680
           EPDP  +  +RWVW ++G  Y ID
Sbjct: 121 EPDPYNRKQMRWVWVFEGQEYIID 144



 Score = 63.2 bits (152), Expect(2) = 9e-63
 Identities = 27/54 (50%), Positives = 37/54 (68%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWW 897
           I+FRV  +SYP +P+++  D+          KPFAPMV+TG+ID DGLG +SWW
Sbjct: 149 IKFRVEGISYPSVPIERAEDA----------KPFAPMVITGNIDDDGLGLVSWW 192


>ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335460|gb|EFH65877.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score =  201 bits (512), Expect(2) = 2e-62
 Identities = 94/136 (69%), Positives = 113/136 (83%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LSE+EH+LR+PPHLLN PL DAIK  L ++FLDKV+  LGLCVSVYDI+SI+GGFV 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSVYDIKSIEGGFVL 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           PGDGA+TY V FR+V+FRPFVGEVI+A+ KES  +GLRL+LGFFDDIYVP PL+  PN  
Sbjct: 61  PGDGAATYKVGFRIVVFRPFVGEVIAAKFKESDSNGLRLTLGFFDDIYVPAPLMPKPNRC 120

Query: 609 EPDPGLKDGVRWVWEY 656
           EPDP  +  + WVWEY
Sbjct: 121 EPDPYNRKQMIWVWEY 136



 Score = 65.5 bits (158), Expect(2) = 2e-62
 Identities = 28/54 (51%), Positives = 38/54 (70%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWW 897
           I+FRV ++SYP +P ++  D+          KPFAPMVVTG++D DGLGP+SWW
Sbjct: 151 IKFRVESISYPSVPTERAEDA----------KPFAPMVVTGNMDEDGLGPVSWW 194


>ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containing protein
           [Arabidopsis thaliana]
           gi|7523702|gb|AAF63141.1|AC011001_11 hypothetical
           protein [Arabidopsis thaliana]
           gi|17529108|gb|AAL38764.1| putative RNA polymerase
           [Arabidopsis thaliana] gi|23296904|gb|AAN13199.1|
           putative RNA polymerase [Arabidopsis thaliana]
           gi|332189917|gb|AEE28038.1| RNA polymerase Rpb7
           N-terminal domain-containing protein [Arabidopsis
           thaliana]
          Length = 204

 Score =  198 bits (503), Expect(2) = 2e-61
 Identities = 91/136 (66%), Positives = 112/136 (82%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LSE+EH+LR+PPHLLN PL DAIK  L ++FLDKV+  LGLCVS+YDI+S++GGFV 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSIYDIKSVEGGFVL 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           PGDGA+TY V  R+V+FRPFVGEVI+A+ KES  +GLRL+LGFFDDIYVP PL+  PN  
Sbjct: 61  PGDGAATYKVGLRIVVFRPFVGEVIAAKFKESDANGLRLTLGFFDDIYVPAPLMPKPNRC 120

Query: 609 EPDPGLKDGVRWVWEY 656
           EPDP  +  + WVWEY
Sbjct: 121 EPDPYNRKQMIWVWEY 136



 Score = 65.5 bits (158), Expect(2) = 2e-61
 Identities = 28/54 (51%), Positives = 38/54 (70%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWW 897
           I+FRV ++SYP +P ++  D+          KPFAPMVVTG++D DGLGP+SWW
Sbjct: 151 IKFRVESISYPSVPTERAEDA----------KPFAPMVVTGNMDDDGLGPVSWW 194


>ref|XP_004514743.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Cicer
           arietinum]
          Length = 196

 Score =  190 bits (483), Expect(2) = 9e-60
 Identities = 93/152 (61%), Positives = 114/152 (75%), Gaps = 4/152 (2%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LS IEH LRLPP LL+ P+ DAI  EL  LFLDKVI  LGLC  VYDI SI+GGF+F
Sbjct: 1   MFYLSRIEHKLRLPPSLLSLPIRDAIHTELEKLFLDKVIANLGLCTCVYDIISIEGGFIF 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           PGDGA TYTV F L+MFRP +GE+I+A+L  S  DGLRLSLGFFDDIY+P   + +P+H 
Sbjct: 61  PGDGAPTYTVVFNLIMFRPIMGEIITAKLHSSDADGLRLSLGFFDDIYIPTHHMPNPSHF 120

Query: 609 EPDPGLKD-GVRWVWEY---DGVNYPIDGTDE 692
           +P PG  +  V W W+Y   +G++YPID +DE
Sbjct: 121 DPIPGKSNKSVVWFWDYKKEEGLSYPIDSSDE 152



 Score = 67.8 bits (164), Expect(2) = 9e-60
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWW 897
           I+F+V +VSYPPIP++Q           K SKPFAPM+V GS+D DGLGP+SWW
Sbjct: 153 IKFQVQSVSYPPIPVEQ----------PKESKPFAPMLVYGSLDQDGLGPVSWW 196


>ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Cucumis sativus] gi|449523449|ref|XP_004168736.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           RPC8-like [Cucumis sativus]
          Length = 226

 Score =  186 bits (473), Expect(2) = 3e-58
 Identities = 89/148 (60%), Positives = 112/148 (75%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LS IEHTLR+PP LLN P+ DAIKGEL  LF+DKV+  LGLC+SVYDIRS+ GGF+F
Sbjct: 1   MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIF 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           P DGA+TY V F L++FRPF GEVI  +++ES ++GLR+SLGFF+DIYVPV L+ S +  
Sbjct: 61  PSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRISLGFFEDIYVPVELMPSGSEF 120

Query: 609 EPDPGLKDGVRWVWEYDGVNYPIDGTDE 692
            PD       RWVW Y+ V + I  +DE
Sbjct: 121 TPDENNGGRCRWVWIYNEVPFDIYESDE 148



 Score = 66.6 bits (161), Expect(2) = 3e-58
 Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 6/60 (10%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEK-ELEQKVS-----KPFAPMVVTGSIDSDGLGPISWW 897
           I+F+VH++ YP I ++Q  +S+ K  +E+K       KPFAPMV+T S+D DGLGP+SWW
Sbjct: 149 IKFKVHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQDGLGPVSWW 208


>ref|XP_004515171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           isoform X1 [Cicer arietinum]
           gi|502172669|ref|XP_004515172.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC8-like isoform X2 [Cicer
           arietinum]
          Length = 196

 Score =  185 bits (470), Expect(2) = 3e-58
 Identities = 91/152 (59%), Positives = 113/152 (74%), Gaps = 4/152 (2%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LS IEH LRLPP LL+ P+ DAI  EL  LFLDKVI  LGLC  VYDI SI+GGF+F
Sbjct: 1   MFYLSRIEHKLRLPPSLLSLPIRDAIHMELEKLFLDKVIANLGLCTCVYDIISIEGGFIF 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
            GDGA TYTV F L+MFRP +GE+I+A+L  S  DGLRLSLGFFDDIY+P   + +P+H 
Sbjct: 61  AGDGAPTYTVVFNLIMFRPIMGEIITAKLHSSDADGLRLSLGFFDDIYIPTHHMPNPSHF 120

Query: 609 EPDPGLKD-GVRWVWEY---DGVNYPIDGTDE 692
           +P PG  +  V W W++   +G++YPID +DE
Sbjct: 121 DPMPGKSNKSVVWFWDFKKEEGLSYPIDSSDE 152



 Score = 67.8 bits (164), Expect(2) = 3e-58
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWW 897
           I+F+V +VSYPPIP++Q           K SKPFAPM+V GS+D DGLGP+SWW
Sbjct: 153 IKFQVQSVSYPPIPVEQ----------PKESKPFAPMLVYGSLDQDGLGPVSWW 196


>ref|XP_006479592.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           isoform X3 [Citrus sinensis]
          Length = 187

 Score =  215 bits (547), Expect(2) = 2e-57
 Identities = 101/148 (68%), Positives = 125/148 (84%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LS+IEHTLRLPPHLL  PLN+AIK EL ++FLDKVI  LGLC+S+YDI+ I+GGFV+
Sbjct: 1   MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKVIANLGLCISIYDIKEIEGGFVY 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           PG+GAST+TV+FRLV+FRPFVGE+I+A+LKES  +GLRLSLGFF+DIYVP  LL SP+ S
Sbjct: 61  PGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLGFFEDIYVPSHLLPSPSRS 120

Query: 609 EPDPGLKDGVRWVWEYDGVNYPIDGTDE 692
           EPDP  +  V+W+WE+    Y IDG DE
Sbjct: 121 EPDPYGRYEVKWIWEFGDTKYVIDGLDE 148



 Score = 35.0 bits (79), Expect(2) = 2e-57
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVV 852
           I+FRV +V+YP IP++Q             SKPFAPMV+
Sbjct: 149 IKFRVLSVNYPSIPIEQAEG----------SKPFAPMVI 177


>ref|XP_006443913.1| hypothetical protein CICLE_v10023915mg, partial [Citrus clementina]
           gi|557546175|gb|ESR57153.1| hypothetical protein
           CICLE_v10023915mg, partial [Citrus clementina]
          Length = 178

 Score =  215 bits (547), Expect(2) = 2e-57
 Identities = 101/148 (68%), Positives = 125/148 (84%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LS+IEHTLRLPPHLL  PLN+AIK EL ++FLDKVI  LGLC+S+YDI+ I+GGFV+
Sbjct: 1   MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKVIANLGLCISIYDIKEIEGGFVY 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNHS 608
           PG+GAST+TV+FRLV+FRPFVGE+I+A+LKES  +GLRLSLGFF+DIYVP  LL SP+ S
Sbjct: 61  PGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLGFFEDIYVPSHLLPSPSRS 120

Query: 609 EPDPGLKDGVRWVWEYDGVNYPIDGTDE 692
           EPDP  +  V+W+WE+    Y IDG DE
Sbjct: 121 EPDPYGRYEVKWIWEFGDTKYVIDGLDE 148



 Score = 35.0 bits (79), Expect(2) = 2e-57
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVV 852
           I+FRV +V+YP IP++Q             SKPFAPMV+
Sbjct: 149 IKFRVLSVNYPSIPIEQAEG----------SKPFAPMVI 177


>gb|ESW06109.1| hypothetical protein PHAVU_010G020200g [Phaseolus vulgaris]
          Length = 215

 Score =  174 bits (440), Expect(2) = 1e-55
 Identities = 90/160 (56%), Positives = 108/160 (67%), Gaps = 13/160 (8%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LS+IEH L LPP  L  P+ +AI  EL  LFLDKVI  +GLC+SVYDIRSI GGF+F
Sbjct: 1   MFYLSKIEHKLPLPPSRLVLPIREAIHMELEKLFLDKVIANVGLCISVYDIRSIDGGFIF 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNH- 605
           PGDGA TYTV F L+MFRPFVGE+I+ARL  S  DGLRL+LGFF+DIYVP   +  PNH 
Sbjct: 61  PGDGAPTYTVVFNLIMFRPFVGEIITARLISSDSDGLRLTLGFFEDIYVPAHHMPYPNHF 120

Query: 606 ---------SEPDPGLKDGVR---WVWEYDGVNYPIDGTD 689
                    S  +    + VR   W W+++   YPI  TD
Sbjct: 121 VEDEQGKRVSSSEESTTNSVRKGVWYWDFNEQEYPIQETD 160



 Score = 70.5 bits (171), Expect(2) = 1e-55
 Identities = 33/54 (61%), Positives = 39/54 (72%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWW 897
           I+FRV NVSYP IP++Q           K SKPFAPM+VTGS+D DGLGP+SWW
Sbjct: 162 IKFRVQNVSYPQIPVEQ----------PKESKPFAPMLVTGSLDHDGLGPVSWW 205


>ref|XP_003554543.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc8-like
           isoform X1 [Glycine max]
          Length = 212

 Score =  172 bits (437), Expect(2) = 1e-54
 Identities = 89/158 (56%), Positives = 105/158 (66%), Gaps = 15/158 (9%)
 Frame = +3

Query: 249 MFFLSEIEHTLRLPPHLLNQPLNDAIKGELGSLFLDKVIEKLGLCVSVYDIRSIKGGFVF 428
           MF+LS+IEH L LPP  L  P+ +AI  EL  LFLDKVI  LGLC+SVYDIRSI GGF+F
Sbjct: 1   MFYLSKIEHELPLPPSRLVLPIREAIHMELEKLFLDKVIANLGLCISVYDIRSIDGGFIF 60

Query: 429 PGDGASTYTVRFRLVMFRPFVGEVISARLKESTKDGLRLSLGFFDDIYVPVPLLASPNH- 605
           PGDGA TYTV F L+MFRPF  E+I+ARL  S  DGLRL++GF+DDIY+P   L  PNH 
Sbjct: 61  PGDGAPTYTVVFNLIMFRPFEKEIITARLLSSDADGLRLTIGFYDDIYIPASRLPDPNHF 120

Query: 606 --------------SEPDPGLKDGVRWVWEYDGVNYPI 677
                         S  +P  K G+ W W+YD   YPI
Sbjct: 121 VETEPKKRVSSGQESTANPSSKKGM-WYWDYDEQEYPI 157



 Score = 68.6 bits (166), Expect(2) = 1e-54
 Identities = 33/54 (61%), Positives = 39/54 (72%)
 Frame = +1

Query: 736 IRFRVHNVSYPPIPLDQRNDSDEKELEQKVSKPFAPMVVTGSIDSDGLGPISWW 897
           I+FRV NVSYP IP++Q           K SKPFAPM+V+G+ID DGLGPISWW
Sbjct: 161 IKFRVTNVSYPQIPVEQ----------PKESKPFAPMLVSGAIDDDGLGPISWW 204