BLASTX nr result
ID: Rehmannia26_contig00018619
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia26_contig00018619 (812 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 406 e-111 gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] 404 e-110 gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 402 e-109 gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] 400 e-109 gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot... 399 e-109 emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 398 e-108 emb|CBI21038.3| unnamed protein product [Vitis vinifera] 393 e-107 ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V... 393 e-107 ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 391 e-106 ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu... 387 e-105 ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco... 386 e-105 gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu... 385 e-105 gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao] 380 e-103 ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 379 e-103 ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 377 e-102 ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici... 375 e-102 ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 374 e-101 ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 374 e-101 ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis... 374 e-101 gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis] 373 e-101 >dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] Length = 1197 Score = 406 bits (1044), Expect = e-111 Identities = 200/269 (74%), Positives = 224/269 (83%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHADLS++GALDEKC+KLAELAA+AVDFPKTGK+VTMP +LKPK+YPDFMGKEE Q+Y Sbjct: 929 VVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYK 988 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 S KILGKLYR++KD D E S+ ++I YD LEI GS +FI DAWN KCSYDG Sbjct: 989 SKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDSTLEILGSTAFIDDAWNSKCSYDG 1048 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QL GLLGQYKVNREEE+VTGHIWSMPKYS+KKQGELKERLKHAY+TLRKEFR VFE MDP Sbjct: 1049 QLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMDP 1108 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYLA 720 +FD L DDEKN MYE+KASAWYQVTYH W+ +S ELQ+ D TVMLSFAWIAADYLA Sbjct: 1109 DFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQLPDAVSNTVMLSFAWIAADYLA 1168 Query: 721 RIKIRRRRTENDISTKPIDSLGRYLADKI 807 RIKIR RR + STKPI+SLGRYL D I Sbjct: 1169 RIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197 >gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] Length = 1197 Score = 404 bits (1037), Expect = e-110 Identities = 200/269 (74%), Positives = 224/269 (83%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHADLS++GALDEKC+KLAELAA+AVDFPKTGK+VTMP +LKPK+YPDFMGKEE Q+Y Sbjct: 929 VVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYK 988 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 S KILGKLYR++KD D E S+ ++I YD LEI GS +FI DAWN KCSYDG Sbjct: 989 SKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFIDDAWNSKCSYDG 1048 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QL GLLGQYKVNREEE+VTGHIWSMPKYS+KKQGELKERLKHAY+TLRKEFR VFE M+P Sbjct: 1049 QLNGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMEP 1108 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYLA 720 +FD L DDEKN MYE+KASAWYQVTYH W+ +S ELQ+ D TVMLSFAWIAADYLA Sbjct: 1109 DFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQIPDAVSSTVMLSFAWIAADYLA 1168 Query: 721 RIKIRRRRTENDISTKPIDSLGRYLADKI 807 RIKIR R STKPI+SLGRYLADKI Sbjct: 1169 RIKIRHRGLPYSDSTKPINSLGRYLADKI 1197 >gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] Length = 1197 Score = 402 bits (1032), Expect = e-109 Identities = 197/269 (73%), Positives = 224/269 (83%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHADLS++GALDEKC+KLAELAA+AVDFPKTGK+VTMP +LKPK+YPDFMGKEE Q+Y Sbjct: 929 VVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYK 988 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 S KILGKLYR++KD D E S+ ++I YD LEI GS +FI DAWN KCSYDG Sbjct: 989 SKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFIDDAWNSKCSYDG 1048 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QL GLLGQYKVNREEE+VTG+IWSMPKY++KKQGELKERLKHAY+TLRKEFR VFE M+P Sbjct: 1049 QLNGLLGQYKVNREEEVVTGYIWSMPKYNAKKQGELKERLKHAYNTLRKEFRNVFERMEP 1108 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYLA 720 +FD L DDEKN MYE+KASAWYQVTYH W+ +S ELQ+ D TVMLSFAWIAADYLA Sbjct: 1109 DFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQLADAVSNTVMLSFAWIAADYLA 1168 Query: 721 RIKIRRRRTENDISTKPIDSLGRYLADKI 807 RIKIR RR + STKPI+SLGRYL D I Sbjct: 1169 RIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197 >gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] Length = 1197 Score = 400 bits (1027), Expect = e-109 Identities = 197/269 (73%), Positives = 222/269 (82%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHADLS++GALDEKC+KLAELAA+AVDFPKTGK+VTMP +LKPK+YPDFMGKEE Q+Y Sbjct: 929 VVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYK 988 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 S KILGKLYR++KD D E S+ +I YD LEI GS +FI DAWN KCSYDG Sbjct: 989 SKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTAFIDDAWNSKCSYDG 1048 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QL GLLGQYKVNREEE+VTGHIWSMPKYS+KKQGELKERLKHAY+TLRKEFR VFE M+P Sbjct: 1049 QLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMEP 1108 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYLA 720 +FD L DDEKN MYE+KASAWYQVTY+ W+ +S ELQ+ D TVMLSFAWIAADYLA Sbjct: 1109 DFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAVSSTVMLSFAWIAADYLA 1168 Query: 721 RIKIRRRRTENDISTKPIDSLGRYLADKI 807 RIKIR R + STKPI+SLGRYL D I Sbjct: 1169 RIKIRHRGLQYSDSTKPINSLGRYLVDNI 1197 >gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana] Length = 1197 Score = 399 bits (1026), Expect = e-109 Identities = 196/269 (72%), Positives = 220/269 (81%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHADLS++GALDEKC+KLAELAA+AVDFPKTGK+VTMP +LKPK+YPDFMGKEE Q+Y Sbjct: 929 VVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYK 988 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 S KILGKLYR++KD D E S+ +I YD LEI GS F+ DAWNCKCSYDG Sbjct: 989 SKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTVFMGDAWNCKCSYDG 1048 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QL GLLGQYKVNREEE+VTGHIWSMPKYS+KKQGELKERLKHAY+ LRKEFR VFE MDP Sbjct: 1049 QLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNMLRKEFRNVFERMDP 1108 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYLA 720 +FD L DDEKN MYE+KASAWYQVTY+ W+ +S ELQ+ D TVMLSFAWIAADYLA Sbjct: 1109 DFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAVSSTVMLSFAWIAADYLA 1168 Query: 721 RIKIRRRRTENDISTKPIDSLGRYLADKI 807 RI IR R + STKPI+SLGRYL D I Sbjct: 1169 RINIRHRGLQYSDSTKPINSLGRYLVDNI 1197 >emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] Length = 1197 Score = 398 bits (1023), Expect = e-108 Identities = 198/269 (73%), Positives = 222/269 (82%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHADLS++GALDEKC+KLAELAA+AVDFPKTGK+VTMP +LKPK+YPDFMGKEE Q+Y Sbjct: 929 VVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYK 988 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 S KILGKLYR++KD D E S+ ++I YD L I GS FI DAWN KCSYDG Sbjct: 989 SKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLVIPGSTVFIDDAWNSKCSYDG 1048 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QL GLLGQYKVNREEE+VTGHIWSMPKYS+KKQGELKERLKHAY+TLRKEFR VFE MDP Sbjct: 1049 QLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMDP 1108 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYLA 720 +FD L DDEKN MYE+KASAWYQVTY+ W+ +S ELQ+ D TVMLSFAWIAADYLA Sbjct: 1109 DFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAISSTVMLSFAWIAADYLA 1168 Query: 721 RIKIRRRRTENDISTKPIDSLGRYLADKI 807 RIKIR R + STKPI+SLGRYL DKI Sbjct: 1169 RIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197 >emb|CBI21038.3| unnamed protein product [Vitis vinifera] Length = 1035 Score = 393 bits (1010), Expect = e-107 Identities = 191/270 (70%), Positives = 224/270 (82%), Gaps = 1/270 (0%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHAD S+YGALDE C+ LAE AA AVDFPKTGK+VT+PP LKPK+YPDFMGKEE QTY Sbjct: 766 VVHADRSEYGALDEACLDLAERAATAVDFPKTGKLVTLPPYLKPKMYPDFMGKEEFQTYR 825 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 SNKILGK+YR+IKDA + ESSEQ F + + +D+DL I GS FI DAW KCSYDG Sbjct: 826 SNKILGKMYRQIKDAYNEDVSESSEQIFGADKVPFDEDLGIPGSADFINDAWIHKCSYDG 885 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QL GLLGQYKV REEE+VTGH+WSMPKY S+KQGEL ERLKHAYS+L+KEFR++FE M+ Sbjct: 886 QLNGLLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNS 945 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDA-GKTVMLSFAWIAADYL 717 +FDQL+DDEKN +YE+KASAWYQVTYH +W+KKS ELQ D+ G+ VMLSFAWI ADYL Sbjct: 946 DFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITADYL 1005 Query: 718 ARIKIRRRRTENDISTKPIDSLGRYLADKI 807 ARIKIRR+ T N S+KPI+SL R+L D+I Sbjct: 1006 ARIKIRRKGTGNVDSSKPINSLARFLVDRI 1035 >ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera] Length = 1197 Score = 393 bits (1010), Expect = e-107 Identities = 191/270 (70%), Positives = 224/270 (82%), Gaps = 1/270 (0%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHAD S+YGALDE C+ LAE AA AVDFPKTGK+VT+PP LKPK+YPDFMGKEE QTY Sbjct: 928 VVHADRSEYGALDEACLDLAERAATAVDFPKTGKLVTLPPYLKPKMYPDFMGKEEFQTYR 987 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 SNKILGK+YR+IKDA + ESSEQ F + + +D+DL I GS FI DAW KCSYDG Sbjct: 988 SNKILGKMYRQIKDAYNEDVSESSEQIFGADKVPFDEDLGIPGSADFINDAWIHKCSYDG 1047 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QL GLLGQYKV REEE+VTGH+WSMPKY S+KQGEL ERLKHAYS+L+KEFR++FE M+ Sbjct: 1048 QLNGLLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNS 1107 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDA-GKTVMLSFAWIAADYL 717 +FDQL+DDEKN +YE+KASAWYQVTYH +W+KKS ELQ D+ G+ VMLSFAWI ADYL Sbjct: 1108 DFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITADYL 1167 Query: 718 ARIKIRRRRTENDISTKPIDSLGRYLADKI 807 ARIKIRR+ T N S+KPI+SL R+L D+I Sbjct: 1168 ARIKIRRKGTGNVDSSKPINSLARFLVDRI 1197 >ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Solanum tuberosum] Length = 1198 Score = 391 bits (1004), Expect = e-106 Identities = 192/269 (71%), Positives = 221/269 (82%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHADLS++GALDEKC+KLAELAA+AVDFPKTGK+VTMP +LKPK+YPDFMGKE QTY Sbjct: 930 VVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEPFQTYE 989 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 S KILGKLYR++ D D ESS F ++I YD ++EI G + FI DAWN KCSYDG Sbjct: 990 SKKILGKLYRQVIDVYDAEGGESSGLEFVPKDIPYDTNIEILGYEDFIDDAWNHKCSYDG 1049 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QL GLLGQYKVN EEE+VTGHIWSMPKYS+KKQGELKERLKHAY+TLRKEFR VFE M+P Sbjct: 1050 QLNGLLGQYKVNGEEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFEQMEP 1109 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYLA 720 +FD L DEKN MYE+KASAWY+VTYH W+ +S ELQ+ D VMLSFAWIAADY+A Sbjct: 1110 DFDMLPVDEKNDMYERKASAWYRVTYHPHWVTRSLELQLPDAVSNGVMLSFAWIAADYIA 1169 Query: 721 RIKIRRRRTENDISTKPIDSLGRYLADKI 807 RIKIR+R +N STKPI+ LGRYL +KI Sbjct: 1170 RIKIRQRGMQNSDSTKPINFLGRYLVNKI 1198 >ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] Length = 1200 Score = 387 bits (993), Expect = e-105 Identities = 186/269 (69%), Positives = 220/269 (81%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHADLS+YGA D+ C+ LAELAA AVDFPKTGK+V+MPP LKPK+YPDFMGKEE Q+Y Sbjct: 932 VVHADLSEYGATDKNCLTLAELAATAVDFPKTGKVVSMPPYLKPKMYPDFMGKEEYQSYK 991 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 S KILG+LYR+IKDA D SSE +I YD DLE+ G+ +I+DAW+ KCSYDG Sbjct: 992 SEKILGRLYRQIKDAYDEDVAASSELNLVPGDIPYDSDLEVVGASDYISDAWDQKCSYDG 1051 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QL GLL QYKV REEE+VTGHIWSMPKYSS+KQGELK+RLKH+Y++L+KEFR++FE MD Sbjct: 1052 QLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDL 1111 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYLA 720 EF+QL D EKN +YE+KASAWYQV YH W+KKS ELQ D AG +VMLSFAWIAADYLA Sbjct: 1112 EFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSLELQDPDGAGTSVMLSFAWIAADYLA 1171 Query: 721 RIKIRRRRTENDISTKPIDSLGRYLADKI 807 RIKIR R T N S KP++SL +YLAD++ Sbjct: 1172 RIKIRHRETGNVDSAKPVNSLAKYLADRM 1200 >ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum] gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum] Length = 1197 Score = 386 bits (991), Expect = e-105 Identities = 190/269 (70%), Positives = 220/269 (81%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHADLS++GA+DEKC+KLAELAA+AVDFPKTGK+VTMP +LKPK+YPDFMGKE Q+Y Sbjct: 929 VVHADLSEFGAMDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEPFQSYE 988 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 S KILGKLYR++ D D ESS + ++I YD +LEI G + FI DAWN KCSYDG Sbjct: 989 SKKILGKLYRQVIDVYDAEGGESSGLEYVPKDIPYDTNLEIPGYEDFIDDAWNHKCSYDG 1048 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QL GLLGQYKVN EEE+VTGHIWSMPKYS+KKQGELKERLKHAY+ LRKEFR VFE M+P Sbjct: 1049 QLNGLLGQYKVNGEEEVVTGHIWSMPKYSAKKQGELKERLKHAYNMLRKEFRNVFEQMEP 1108 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYLA 720 +FD L DEKN MYE+KA AWY+VTYH W+ +S ELQ+ D VMLSFAWIAADY+A Sbjct: 1109 DFDLLPIDEKNDMYERKAFAWYRVTYHPHWVTRSLELQLPDAVSNGVMLSFAWIAADYIA 1168 Query: 721 RIKIRRRRTENDISTKPIDSLGRYLADKI 807 RIKIR+R +N STKPIDSLGRYL +KI Sbjct: 1169 RIKIRQRGMQNFDSTKPIDSLGRYLVNKI 1197 >gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum] gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum] Length = 1196 Score = 385 bits (990), Expect = e-105 Identities = 189/269 (70%), Positives = 220/269 (81%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVH+DLS++GA DEKCI LAELAAIAVDFPKTGKIV+MP +LKPKLYPDFMGKEE Q+Y Sbjct: 928 VVHSDLSEHGASDEKCIHLAELAAIAVDFPKTGKIVSMPAQLKPKLYPDFMGKEEFQSYK 987 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 SNKILG+LYR IKDA D+ ESSE F +I YD DLEITGS +I DAW KCSYDG Sbjct: 988 SNKILGRLYRYIKDAYDKDVSESSELNFGASDINYDADLEITGSADYITDAWAKKCSYDG 1047 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QLIGLL QYKV REEE+VTG IWSMPKY+SKK G+LKE+L H+Y +LRKEFR++FE+MD Sbjct: 1048 QLIGLLKQYKVKREEEVVTGQIWSMPKYASKKLGDLKEKLGHSYGSLRKEFRQLFENMDS 1107 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYLA 720 EF+QL++DEKN +YE+KASAWYQVTYH W++K E Q D VMLSFAWIAADYLA Sbjct: 1108 EFEQLNEDEKNKLYERKASAWYQVTYHPEWVQKKLEFQKPDGDEGVVMLSFAWIAADYLA 1167 Query: 721 RIKIRRRRTENDISTKPIDSLGRYLADKI 807 RIK+R + TEN KP++SL RYLAD+I Sbjct: 1168 RIKVRHQGTENLDFAKPVNSLVRYLADRI 1196 >gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao] Length = 1197 Score = 380 bits (977), Expect = e-103 Identities = 188/269 (69%), Positives = 216/269 (80%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHADLS+YGALDEKCI LAELAA AVDFPKTGKIV+MP LKPKLYPDFMGKEE Q+Y Sbjct: 929 VVHADLSEYGALDEKCIHLAELAATAVDFPKTGKIVSMPANLKPKLYPDFMGKEEYQSYK 988 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 S KILG+LYR IKD D ESSE +I YD DLE+TGS +I DAW KCSYD Sbjct: 989 SRKILGRLYRHIKDVYDEDLSESSEINLDSPDINYDTDLEVTGSADYIDDAWVKKCSYDR 1048 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QLIGLLGQYKV REEE+VTGHIWSMPKY+S+K G+LKE+L H+Y LRKEFR++FESMD Sbjct: 1049 QLIGLLGQYKVKREEEVVTGHIWSMPKYTSRKLGDLKEKLGHSYGALRKEFRQIFESMDS 1108 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYLA 720 E +QL++DE+N +YE+KASAWYQVTYH W++K ELQ D A VMLSFAWIAADYLA Sbjct: 1109 EIEQLNEDERNELYERKASAWYQVTYHPKWVEKKLELQKSDGADPVVMLSFAWIAADYLA 1168 Query: 721 RIKIRRRRTENDISTKPIDSLGRYLADKI 807 RIKIR + T N +KP++SL +YLADKI Sbjct: 1169 RIKIRSQGTGNVDFSKPVNSLVKYLADKI 1197 >ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] Length = 1198 Score = 379 bits (973), Expect = e-103 Identities = 187/270 (69%), Positives = 222/270 (82%), Gaps = 1/270 (0%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VV ADLS+YGALDEKC+ LAELAA AVDFPKTGKIV+MP +LKPK+YPDFMGKEE Q+Y Sbjct: 929 VVRADLSEYGALDEKCLTLAELAATAVDFPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYK 988 Query: 181 SNKILGKLYRKIKDA-NDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYD 357 S KILG+LYR+IKDA +D SSE F +I YD DLE+ G+ FI+DAW+ KCSYD Sbjct: 989 SKKILGRLYRQIKDAYDDDDVAASSELNFVRGDIPYDLDLEVLGATDFISDAWDRKCSYD 1048 Query: 358 GQLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMD 537 GQL GLL QYKV REEE+VTGH+WSMPK SS+KQG+LKERLKH+Y+ L++EFR+VFE MD Sbjct: 1049 GQLNGLLAQYKVKREEEVVTGHVWSMPKGSSRKQGDLKERLKHSYNCLKREFRQVFEKMD 1108 Query: 538 PEFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYL 717 +F QL DDEKN++YE+KASAWYQVTYH W++KS ELQ D AG +VMLSFAWIAADYL Sbjct: 1109 LDFGQLDDDEKNMLYERKASAWYQVTYHPHWIQKSLELQDSDGAGISVMLSFAWIAADYL 1168 Query: 718 ARIKIRRRRTENDISTKPIDSLGRYLADKI 807 ARIKIR R N S KP++SL +YLAD++ Sbjct: 1169 ARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1198 >ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Citrus sinensis] Length = 1197 Score = 377 bits (967), Expect = e-102 Identities = 189/269 (70%), Positives = 214/269 (79%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHAD S+YGALDE CI LAELAA AVDFPKTGKIVTMP LKPKLYPDFMGKE Q+Y Sbjct: 929 VVHADHSEYGALDENCILLAELAATAVDFPKTGKIVTMPAHLKPKLYPDFMGKEAYQSYK 988 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 SNKILG+LYR+ KDA D SSE +I YD DLE+ S FIADAWN KCSYDG Sbjct: 989 SNKILGRLYRQSKDAYDEDISVSSEVDINPVDIHYDTDLEVPESVDFIADAWNQKCSYDG 1048 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QL GLL QYKVNREEELVTGHIWSMPKY+S+KQGELKERLKH+YS LRKEFR+VFE MD Sbjct: 1049 QLNGLLEQYKVNREEELVTGHIWSMPKYNSRKQGELKERLKHSYSALRKEFRQVFEKMDS 1108 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYLA 720 + + LS+DEKN ++E+KASAWYQVTYH W+KKS +LQ D A V+LSFAWIA DYLA Sbjct: 1109 DCELLSEDEKNALFERKASAWYQVTYHPEWVKKSLDLQEQDSARSVVLLSFAWIANDYLA 1168 Query: 721 RIKIRRRRTENDISTKPIDSLGRYLADKI 807 RIKIR R N ++KP++ L RY+AD+I Sbjct: 1169 RIKIRCREMANIDTSKPVNYLARYVADRI 1197 >ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis] gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase, putative [Ricinus communis] Length = 1203 Score = 375 bits (964), Expect = e-102 Identities = 185/275 (67%), Positives = 222/275 (80%), Gaps = 6/275 (2%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHADLS+YGALDE CIKLAELAA AVDFPKTGK+VTMPP LKPKLYPDFMGKE+ Q+Y+ Sbjct: 929 VVHADLSEYGALDENCIKLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEDYQSYN 988 Query: 181 SNKILGKLYRKIKDA------NDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNC 342 SNKILG+LYR++KD +D SSE +I YD+DLE++GS +I DAW+ Sbjct: 989 SNKILGRLYRQVKDDYNDDDDDDDDAATSSELNLVRGDIPYDKDLEVSGSSDYILDAWDQ 1048 Query: 343 KCSYDGQLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKV 522 KCSYDGQL GLL QYKV REEE+VTGHIWSMPK +S+KQGELKERLK +Y +L+KEFR+V Sbjct: 1049 KCSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRKQGELKERLKQSYHSLKKEFRQV 1108 Query: 523 FESMDPEFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWI 702 FE MD +F+QL++DEKN++YE+KASAWYQV YH W+ KS ELQ D AG MLSFAWI Sbjct: 1109 FEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVNKSMELQEPDAAGCASMLSFAWI 1168 Query: 703 AADYLARIKIRRRRTENDISTKPIDSLGRYLADKI 807 AADYLARIKIR R + ++KP++SL +YLAD+I Sbjct: 1169 AADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203 >ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp. vesca] Length = 1197 Score = 374 bits (960), Expect = e-101 Identities = 180/269 (66%), Positives = 211/269 (78%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVH+D S+YGA DE C+KLAELAA+AVDFPKTGKIVTMPP LKPKLYPDFMGK++ Q+Y Sbjct: 929 VVHSDRSEYGAFDENCLKLAELAAVAVDFPKTGKIVTMPPHLKPKLYPDFMGKQDYQSYK 988 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 SNKILG+LYRKI DA D SSEQ ++ YD DLE+ + FIADAW KCSYD Sbjct: 989 SNKILGRLYRKICDAYDEDVANSSEQNHVPSDVKYDMDLEVPKAADFIADAWERKCSYDS 1048 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QL GL+ QYK+ REEE+VTGH+WSMPKY+S+KQGEL+ERLKH+YS L+KEFR+ FE MD Sbjct: 1049 QLRGLMTQYKIMREEEIVTGHVWSMPKYTSRKQGELQERLKHSYSALKKEFRQFFEKMDT 1108 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYLA 720 F+ L DD+KN YE+KASAWYQVTYH W+KKS +L D G VMLSFAWIAADYLA Sbjct: 1109 GFESLIDDQKNSFYEQKASAWYQVTYHPDWVKKSLDLHGPDGPGDVVMLSFAWIAADYLA 1168 Query: 721 RIKIRRRRTENDISTKPIDSLGRYLADKI 807 RIKI+RR N KPI+ L +YLAD+I Sbjct: 1169 RIKIKRREVSNIDPKKPINILTKYLADRI 1197 >ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus] Length = 1197 Score = 374 bits (960), Expect = e-101 Identities = 183/270 (67%), Positives = 221/270 (81%), Gaps = 1/270 (0%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHAD S +GALDE CI+L+ELAA AVDFPKTGK+VTMPP LKPKLYPDFMGKE Q+Y Sbjct: 928 VVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYK 987 Query: 181 SNKILGKLYRKIKDA-NDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYD 357 S KILGK+YR+I+DA +D S E F ++ YD DLE+ G++ FIA+AW+ KCSYD Sbjct: 988 STKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYD 1047 Query: 358 GQLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMD 537 GQL GLLGQYKVNREEE+VTGHIWSMPKY S+KQGELKE+LKH+YSTL+K+FR+VFE++ Sbjct: 1048 GQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLG 1107 Query: 538 PEFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYL 717 PEF+QL+ DE+N +YEKKASAWYQV YH +WLKKS EL+ D MLSF WIAADYL Sbjct: 1108 PEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYL 1167 Query: 718 ARIKIRRRRTENDISTKPIDSLGRYLADKI 807 ARIKI+ RRT++ TKPI+SL YL+D++ Sbjct: 1168 ARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197 >ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus] gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase 6 [Cucumis sativus] Length = 1197 Score = 374 bits (960), Expect = e-101 Identities = 183/270 (67%), Positives = 221/270 (81%), Gaps = 1/270 (0%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHAD S +GALDE CI+L+ELAA AVDFPKTGK+VTMPP LKPKLYPDFMGKE Q+Y Sbjct: 928 VVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYK 987 Query: 181 SNKILGKLYRKIKDA-NDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYD 357 S KILGK+YR+I+DA +D S E F ++ YD DLE+ G++ FIA+AW+ KCSYD Sbjct: 988 STKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYD 1047 Query: 358 GQLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMD 537 GQL GLLGQYKVNREEE+VTGHIWSMPKY S+KQGELKE+LKH+YSTL+K+FR+VFE++ Sbjct: 1048 GQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLG 1107 Query: 538 PEFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKELQMVDDAGKTVMLSFAWIAADYL 717 PEF+QL+ DE+N +YEKKASAWYQV YH +WLKKS EL+ D MLSF WIAADYL Sbjct: 1108 PEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYL 1167 Query: 718 ARIKIRRRRTENDISTKPIDSLGRYLADKI 807 ARIKI+ RRT++ TKPI+SL YL+D++ Sbjct: 1168 ARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197 >gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis] Length = 1194 Score = 373 bits (958), Expect = e-101 Identities = 180/270 (66%), Positives = 219/270 (81%), Gaps = 1/270 (0%) Frame = +1 Query: 1 VVHADLSDYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPELKPKLYPDFMGKEELQTYH 180 VVHADLSDYGALDEKC+ LAELAAIAVDFPKTG IVTMP LKPK+YPDFMGKEE Q+Y Sbjct: 925 VVHADLSDYGALDEKCLSLAELAAIAVDFPKTGIIVTMPAHLKPKIYPDFMGKEEYQSYK 984 Query: 181 SNKILGKLYRKIKDANDRGYEESSEQTFALENITYDQDLEITGSKSFIADAWNCKCSYDG 360 S KI+G+LYR+IKD SSE NI +D DLE+ G+ F+ DAW KCSYDG Sbjct: 985 STKIMGRLYRQIKDEYSDDVSPSSELNIVSSNIPFDTDLEVPGAADFLDDAWEKKCSYDG 1044 Query: 361 QLIGLLGQYKVNREEELVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFESMDP 540 QL GL+ QYKV REEE+VTG IWSMPK++S+K+G+LKERLKH+Y+ LRKEFR+VFE +D Sbjct: 1045 QLKGLMIQYKVKREEEVVTGQIWSMPKHNSRKEGDLKERLKHSYTGLRKEFRQVFEKVDS 1104 Query: 541 EFDQLSDDEKNIMYEKKASAWYQVTYHESWLKKSKEL-QMVDDAGKTVMLSFAWIAADYL 717 +F+QL+DDEKN++YEK+ASAWYQ+TYH W+KKS+++ +++ VMLSFAWIAADYL Sbjct: 1105 DFEQLTDDEKNVLYEKRASAWYQITYHPKWVKKSQDMHDQLEEVKNVVMLSFAWIAADYL 1164 Query: 718 ARIKIRRRRTENDISTKPIDSLGRYLADKI 807 ARIKIR R + STKPI+SLG+YLAD+I Sbjct: 1165 ARIKIRCRGVGDADSTKPINSLGKYLADRI 1194