BLASTX nr result

ID: Rehmannia26_contig00018575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00018575
         (425 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY28176.1| Uncharacterized protein TCM_029816 [Theobroma cacao]    80   4e-13
gb|ABR16782.1| unknown [Picea sitchensis]                              57   3e-06
ref|XP_002509440.1| pentatricopeptide repeat-containing protein,...    55   1e-05

>gb|EOY28176.1| Uncharacterized protein TCM_029816 [Theobroma cacao]
          Length = 44

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = +3

Query: 129 MLEFFLLGCTGVVVFLHGANFFFHALSSHLAIRAISFLGFVAW 257
           M+E F+LGCTGVVVFLHGANFFFH LS HLA+R++SFLGFV W
Sbjct: 2   MVELFVLGCTGVVVFLHGANFFFHILSQHLAVRSLSFLGFVGW 44


>gb|ABR16782.1| unknown [Picea sitchensis]
          Length = 41

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 23/36 (63%), Positives = 31/36 (86%)
 Frame = +3

Query: 144 LLGCTGVVVFLHGANFFFHALSSHLAIRAISFLGFV 251
           LLGCTGV+VF+HGANFFF+ +  H+A+RA++FL  V
Sbjct: 5   LLGCTGVIVFIHGANFFFNYICKHVAVRALTFLSHV 40


>ref|XP_002509440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549339|gb|EEF50827.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/37 (67%), Positives = 31/37 (83%), Gaps = 2/37 (5%)
 Frame = +3

Query: 129 MLEFFLLG--CTGVVVFLHGANFFFHALSSHLAIRAI 233
           ++E F+LG  CTGVV+FLHGANFFFH LS HLA R++
Sbjct: 2   VVEIFVLGMGCTGVVMFLHGANFFFHVLSHHLAFRSL 38


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