BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00018511
         (638 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A...    94   3e-17
ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608...    94   4e-17
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622...    94   4e-17
ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612...    92   1e-16
gb|EXB89969.1| hypothetical protein L484_023622 [Morus notabilis]      89   1e-15
ref|XP_006428778.1| hypothetical protein CICLE_v10013872mg, part...    88   2e-15
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...    85   2e-14
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...    85   2e-14
ref|XP_006471930.1| PREDICTED: uncharacterized protein LOC102617...    85   2e-14
ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein A...    84   3e-14
ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A...    84   3e-14
ref|XP_006473914.1| PREDICTED: uncharacterized protein LOC102629...    84   3e-14
ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein A...    84   3e-14
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    84   3e-14
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...    83   6e-14
ref|XP_006470123.1| PREDICTED: uncharacterized protein LOC102629...    82   2e-13
gb|EAZ03196.1| hypothetical protein OsI_25347 [Oryza sativa Indi...    80   4e-13
ref|XP_004292412.1| PREDICTED: putative ribonuclease H protein A...    80   5e-13
ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623...    79   1e-12
ref|XP_004301010.1| PREDICTED: putative ribonuclease H protein A...    77   3e-12

>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 1152

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 52/207 (25%), Positives = 104/207 (50%), Gaps = 1/207 (0%)
 Frame = +2

Query: 17   CRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCW-MIKNLANGEFD 193
            C  C+ +++ ++H    C  ++  W+      +  R     ++++  W M++ L+  + +
Sbjct: 845  CVFCSTNVEDSLHLFKNCEALQPFWQQG-MVQIHPRTHPSISVEVWFWDMVEMLSGEKLE 903

Query: 194  LFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATK 373
             F    W+IW ER + +  GQ +   ++++ +  LLL ++  +++  G R+       +K
Sbjct: 904  GFLMALWVIWVERNNMVWRGQFYNITNMMDWSSSLLLEYKHCHQRSVGTRKKNK----SK 959

Query: 374  WSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALK 553
            W+ PP+G+LR+++D      +   G+G V+RD     V +  R      S +  E+ AL+
Sbjct: 960  WTCPPSGRLRVNIDGSFAHEEGRGGVGVVIRDHKGACVASLARPFPNAASAIHMEVEALR 1019

Query: 554  EGLEMCVSAGIRPNIIASDSLLAVQAV 634
             GL +CV  G R   + SD +  VQA+
Sbjct: 1020 AGLLVCVQQGWRDVEVESDCMNLVQAM 1046


>ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608298 [Citrus sinensis]
          Length = 1570

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 55/206 (26%), Positives = 96/206 (46%)
 Frame = +2

Query: 17   CRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDL 196
            C+ CN  L++  H+L  C  +K+ WK+T + + +K +     L L   +    +  + +L
Sbjct: 994  CQFCNKKLETIFHALVGCKVVKKIWKITRFEDDLKDSVEQDMLSLLIELKLRRSKDDIEL 1053

Query: 197  FATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKW 376
              T  W+IW  + S I  G        + KAE +L  F++         +  S S    W
Sbjct: 1054 LVTILWMIWNAQNSWIFKGVKDSPHVTVSKAEAVLEAFRRTQLPAATHIDIQSSSKLKAW 1113

Query: 377  SLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALKE 556
              P  G  +++VDA  N  K    +G V+RD++ N++ A  +   + G V  +E  A++ 
Sbjct: 1114 KPPQRGHFKVNVDAATNSEKQIASLGAVIRDEAGNVIAAAVKVSKFYGDVFIAEAEAIEW 1173

Query: 557  GLEMCVSAGIRPNIIASDSLLAVQAV 634
            GL +  +A     I+ SD+   V+ V
Sbjct: 1174 GLRLAGNACTESLIVESDAQEVVKLV 1199


>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
          Length = 1160

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 5/212 (2%)
 Frame = +2

Query: 14   TCRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFD 193
            TC+LC   +++  H+L  C   K+ W+++ +   I+ A     L L   + +  +N + D
Sbjct: 849  TCQLCKMGIENVFHALVDCKAAKKVWRLSLFYIDIQAAPGQDILSLLHGVKRMRSNADVD 908

Query: 194  LFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATK 373
            LFA   W  W  R   +  G+      ++ KAE ++  ++++         D SH    K
Sbjct: 909  LFAVMLWAKWNARNQWLFKGKRENPQSVVAKAEAVMEAYKRVQPS-----ADVSHGKQQK 963

Query: 374  -----WSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESE 538
                 W+ P  G ++++ DA  N  K+  G+G V+RD++  +     +   + GSV  +E
Sbjct: 964  VAQLGWNPPQEGFVKINTDAATNSEKNLAGLGAVIRDENGQVTATAIKVSKFHGSVAYAE 1023

Query: 539  LLALKEGLEMCVSAGIRPNIIASDSLLAVQAV 634
              A++ GL++   A ++  I+ SDS   V  V
Sbjct: 1024 AEAMEWGLQVAKDAHVKDVIMESDSQEVVSLV 1055


>ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612946 [Citrus sinensis]
          Length = 589

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 51/199 (25%), Positives = 91/199 (45%)
 Frame = +2

Query: 14  TCRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFD 193
           TC LC    +   H+L  C   ++ WK T   N +K       L +    + N A  E D
Sbjct: 311 TCHLCKAGCEDVFHALMECRVARKIWKCTHLENEVKSVIREDMLSVMIGAMNNWAKSEVD 370

Query: 194 LFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATK 373
             AT  W+ W  R   +  G+    +  + K + ++  +Q    K      +        
Sbjct: 371 YVATIWWVAWHARNKLLFQGKKLDPIGSVAKGKTVMEVYQAQQVKERESHRNTVKGKMQI 430

Query: 374 WSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALK 553
           W+ PP  K++++VDA V E + S G+G V+R+    ++ A  +++ +QG++  +E  A+K
Sbjct: 431 WTPPPNNKVKVNVDAAVKEDRKSAGLGVVIRNHRGQVLAAAVKSMNFQGNIAIAEAHAVK 490

Query: 554 EGLEMCVSAGIRPNIIASD 610
            G+E+     +   II +D
Sbjct: 491 WGMEVAKDLSLSSVIIETD 509


>gb|EXB89969.1| hypothetical protein L484_023622 [Morus notabilis]
          Length = 756

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 1/199 (0%)
 Frame = +2

Query: 41  DSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGE-FDLFATCTWL 217
           +S  H+L++C  + + W+++ + + +K  K G   +  C M  N+A  E  ++F    W 
Sbjct: 68  ESIWHALWMCSTVIQVWEVSAFWHKLKPLKAGG-FEALCVMFSNVATEEDLEIFCVLAWT 126

Query: 218 IWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKWSLPPAGK 397
           IW  R   IH+  + +  DIL K   ++  FQ         R     S   +W  P AG 
Sbjct: 127 IWAARNQFIHHRLYREPTDILGKTGRIIAEFQSCCNPAAKHRTTVPVSKV-RWKPPVAGL 185

Query: 398 LRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALKEGLEMCVS 577
            +L+ DA V E   S GIG V+RD    +     + I    S   +E +AL+EGL     
Sbjct: 186 FKLNTDASVREGTSSIGIGVVIRDGDGIVCACLVKRIAGSFSPFLAECMALREGLIFAQE 245

Query: 578 AGIRPNIIASDSLLAVQAV 634
            G   ++   D++  VQAV
Sbjct: 246 RGFFISVAEFDAVCVVQAV 264


>ref|XP_006428778.1| hypothetical protein CICLE_v10013872mg, partial [Citrus clementina]
           gi|557530835|gb|ESR42018.1| hypothetical protein
           CICLE_v10013872mg, partial [Citrus clementina]
          Length = 305

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 55/211 (26%), Positives = 92/211 (43%)
 Frame = +2

Query: 2   PNTGTCRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLAN 181
           P   TC  C F  D T H+L  C  +K+ WK+T +++ +         ++   +   L  
Sbjct: 36  PVAPTCPCCGFDYDDTYHALVGCKQVKKVWKLTRFSSSLNSTMPMEFSNISIHIASLLTK 95

Query: 182 GEFDLFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHS 361
             F+ +      IW  R    H     +  D + +AE +L + +    +   DR   ++ 
Sbjct: 96  DVFEEWVVFCCSIWLARNYLTHGNAIRESQDAVTQAENVLASLRAGTTQGQVDRSSKTNK 155

Query: 362 PATKWSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESEL 541
           P   W   P    ++++DA V       GIG +VR+   +++ A      + G V   E 
Sbjct: 156 PRQTWQSLPEPWYKVNIDAIVRSKADHAGIGVLVRNSVGDVMTASISQALFLGDVEFVEA 215

Query: 542 LALKEGLEMCVSAGIRPNIIASDSLLAVQAV 634
           LAL++GL +    G+ P II SDSL  V  +
Sbjct: 216 LALQKGLRLTSDIGLTPAIIKSDSLNVVNLI 246


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
            [Citrus sinensis]
          Length = 765

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 52/202 (25%), Positives = 87/202 (43%)
 Frame = +2

Query: 8    TGTCRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGE 187
            T  C+ C  H ++  HSLF C   ++ WK+T +   +K  K    L L   +    +  E
Sbjct: 488  TPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCKDVLSLLLALADRRSKTE 547

Query: 188  FDLFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPA 367
             +L     W IW  R   I   +       +  AE ++ +++++         D      
Sbjct: 548  MELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAIVQSYKRIQMPQLQAFSDQDLVSH 607

Query: 368  TKWSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLA 547
              W  PPAG  +++VDA +       G+G V+R+     + A  +   +   V  +E  A
Sbjct: 608  KHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRNSEGKFITAAIKPSKWIDRVDYAEAEA 667

Query: 548  LKEGLEMCVSAGIRPNIIASDS 613
             + GLE+  SAG  P I+ +DS
Sbjct: 668  TRFGLEVAESAGCLPLIVETDS 689


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Citrus sinensis]
          Length = 968

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 52/202 (25%), Positives = 87/202 (43%)
 Frame = +2

Query: 8    TGTCRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGE 187
            T  C+ C  H ++  HSLF C   ++ WK+T +   +K  K    L L   +    +  E
Sbjct: 691  TPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCKDVLSLLLALADRRSKTE 750

Query: 188  FDLFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPA 367
             +L     W IW  R   I   +       +  AE ++ +++++         D      
Sbjct: 751  MELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAIVQSYKRIQMPQLQAFSDQDLVSH 810

Query: 368  TKWSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLA 547
              W  PPAG  +++VDA +       G+G V+R+     + A  +   +   V  +E  A
Sbjct: 811  KHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRNSEGKFITAAIKPSKWIDRVDYAEAEA 870

Query: 548  LKEGLEMCVSAGIRPNIIASDS 613
             + GLE+  SAG  P I+ +DS
Sbjct: 871  TRFGLEVAESAGCLPLIVETDS 892


>ref|XP_006471930.1| PREDICTED: uncharacterized protein LOC102617744 [Citrus sinensis]
          Length = 294

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 49/199 (24%), Positives = 86/199 (43%)
 Frame = +2

Query: 14  TCRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFD 193
           TC  C+  +++  H+LF C   ++TW + P    ++             +  N    E +
Sbjct: 16  TCPRCHKSVETISHALFECKAARKTWNLAPSTFELQNVPGQDIFSYAQNLCSNSRRNEAE 75

Query: 194 LFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATK 373
           L     W IW  R   I   +  + +    KAE +L  +Q++ K       +       +
Sbjct: 76  LMIMYCWAIWFARNKLIFERKKIEPIVSAAKAESMLEAYQRVRKTGTLHISNTREESQQR 135

Query: 374 WSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALK 553
           WS PP   L+L+VDA  N      G+G V+RD +  +V A  +   ++  V  +E  A++
Sbjct: 136 WSPPPTNVLKLNVDAATNSKDQKVGLGAVLRDSNGRVVAAGIKQASFRKDVSFAEAEAIQ 195

Query: 554 EGLEMCVSAGIRPNIIASD 610
            GL++   A     I+ +D
Sbjct: 196 WGLQIAKKAAAASLIVETD 214


>ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 335

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 45/206 (21%), Positives = 95/206 (46%)
 Frame = +2

Query: 17  CRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDL 196
           C+ C   +++ +H L  C   K+ W+ +P A+ + +  +         + ++L+N +F+L
Sbjct: 58  CKRCGNKVENILHVLVTCKAAKKVWQRSPVADAVHKIDSSNLFGELTKLQRSLSNDDFEL 117

Query: 197 FATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKW 376
                W+IW  R   +  G        + KAE +   +++         ++       KW
Sbjct: 118 LLVLLWIIWYARNKFVFEGMKIDPGISVAKAEAIKEAYKRTQFPEMLVGKNSLRQEQNKW 177

Query: 377 SLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALKE 556
           + PP   ++++VDA ++      G+G V++D S    +A  +++  +G VL +E  A + 
Sbjct: 178 APPPPRWVKINVDAAIDAKSKCSGLGAVIKDPSGKCFVAAVKSVTSKGDVLLAEAEADEW 237

Query: 557 GLEMCVSAGIRPNIIASDSLLAVQAV 634
           G  +    G++  I+ +DS   V  +
Sbjct: 238 GTYLAKEEGMQAVILETDSKATVDLI 263


>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 494

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 1/207 (0%)
 Frame = +2

Query: 17  CRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTL-DLCCWMIKNLANGEFD 193
           C+ C   +++T+H+L  C   K+ W+++P A+  +   N   L DL     K L+  + +
Sbjct: 249 CKRCGNRVENTLHALITCKAAKKVWQLSPMASSFQEMGNPDILGDLGG---KKLSRADME 305

Query: 194 LFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATK 373
           +  T  W+IW +R   +           + KAE +   F++       +         T 
Sbjct: 306 MLMTILWVIWYDRNKLVFEDLKLDPRLSMAKAEAINEAFRRTQFPEITNEGKLQKLKQTV 365

Query: 374 WSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALK 553
           W+ PP G L+L+VDA  + +K   G+G ++RD +   + A  + + + G V   E  A +
Sbjct: 366 WTPPPQGWLKLNVDATTDSNKSCAGLGAIIRDSTGKCMAAGIKTVKFSGVVSRVEAEATE 425

Query: 554 EGLEMCVSAGIRPNIIASDSLLAVQAV 634
             +++    G++  I+ +DS   V  +
Sbjct: 426 WAVQIAQQLGMQSIILETDSQEVVDLI 452


>ref|XP_006473914.1| PREDICTED: uncharacterized protein LOC102629934 [Citrus sinensis]
          Length = 304

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 53/207 (25%), Positives = 89/207 (42%)
 Frame = +2

Query: 17  CRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDL 196
           C+ C    ++  H LF C   K+ W++TP+    +  K      L   +       E +L
Sbjct: 26  CQRCKKTRETVCHMLFECKVSKQIWRLTPFVVDSQLGKVRDVFSLLQDLTTKRTKAEMEL 85

Query: 197 FATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKW 376
                W IW  R   I   +       +  AE L+ +++++           S +   KW
Sbjct: 86  IVAVCWSIWHSRNLAIFKNKREDSHLSVAAAEALVQSYKRIQMPQMSKSPPTSLAIQQKW 145

Query: 377 SLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALKE 556
           S PP G  +++VDA V   +   G+G V+R+    ++ A  +   +   V  +E  A K 
Sbjct: 146 SYPPEGWFKVNVDAAVKMEQQRTGLGIVIRNSEGKVMAAAMKPSKFLSKVDAAEAEAAKF 205

Query: 557 GLEMCVSAGIRPNIIASDSLLAVQAVT 637
           GLE+  + G  P II SDS   V+ ++
Sbjct: 206 GLEIAENVGCFPLIIESDSKEVVELIS 232


>ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 393

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
 Frame = +2

Query: 17  CRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIK-NLANGEFD 193
           C  C   +++ +H    CP ++  WK  P  +L   +  G+TL +  +++  NL+  + +
Sbjct: 92  CIFCGNEVETGLHLFRDCPVVQSFWKHNPL-HLRSYSYPGSTLAVWVFLVMDNLSMQQLE 150

Query: 194 LFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATK 373
            F    W +W ER + I  G      ++   A  LL  ++K++ K     +     P  K
Sbjct: 151 GFFMALWTVWIERNNMIWRGGSCNPSNMSVWAMQLLEEYKKVHTKPSVKMK----RPRAK 206

Query: 374 WSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALK 553
           W  PP+G+L+L++D    E     GIG VVR++  N V A  R++ Y  S +  E  AL+
Sbjct: 207 WCCPPSGRLKLNIDGAYLEDGRKGGIGVVVRNEYGNCVAALSRHMPYASSAMHMEAEALR 266

Query: 554 EGLEMCVSAGIRPNIIASDSLLAVQAV 634
             L + +  G     I  D  + ++A+
Sbjct: 267 ASLLIAIHQGWDEVEIEGDCAIVMKAL 293


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 8/215 (3%)
 Frame = +2

Query: 5    NTGTCRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANG 184
            ++ +C  C    +S +H+ + C      ++   + + +   +  + + L       L   
Sbjct: 1363 HSASCFRCQQGRESPVHATWGCSCCVAVFERAGFYSKLSSGQFPSFIHLLHHAFSTLDKE 1422

Query: 185  EFDLFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDR------- 343
            E  LFA   WL W ER +  H G       I E      + F K  K+  G R       
Sbjct: 1423 ELQLFAVLLWLNWHERNNCYHKGAVVPSDIIYENG----VKFLKCFKEALGCRAGVEVKA 1478

Query: 344  -EDPSHSPATKWSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQG 520
             E+       +W  P +G+L+++ D   N     FG G ++RD+  +L++A G+N  +  
Sbjct: 1479 VEEVVPGSLRRWQAPSSGQLKVNCDGAANFKDRCFGGGTIIRDEFGSLIVAGGKNFQHPV 1538

Query: 521  SVLESELLALKEGLEMCVSAGIRPNIIASDSLLAV 625
            S L +ELLA+K GL++ V   +R  ++ SD L A+
Sbjct: 1539 SSLVAELLAIKVGLDLVVERRLRNIMVESDCLEAI 1573


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 769

 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 51/202 (25%), Positives = 87/202 (43%)
 Frame = +2

Query: 8    TGTCRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGE 187
            T  C+ C  H ++  HSLF C   ++ WK+T +   +K  K    L L   +    +  E
Sbjct: 488  TPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFEEEVKALKCKDVLSLLLALADRRSKTE 547

Query: 188  FDLFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPA 367
             +L     W IW  R   I   +       +  AE ++ +++++         +      
Sbjct: 548  MELIVAVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAIVQSYKRIQMPQLQAFSNQDLVSH 607

Query: 368  TKWSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLA 547
              W  PPAG  +++VDA +       G+G V+R+     + A  +   +   V  +E  A
Sbjct: 608  KHWKCPPAGWFKVNVDAAIKLENQRVGLGIVIRNSEGKFITAAIKPSKWLDRVDYAEAEA 667

Query: 548  LKEGLEMCVSAGIRPNIIASDS 613
             + GLE+  SAG  P I+ +DS
Sbjct: 668  TRFGLEVAESAGCLPLIVETDS 689


>ref|XP_006470123.1| PREDICTED: uncharacterized protein LOC102629438 [Citrus sinensis]
          Length = 715

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 52/207 (25%), Positives = 93/207 (44%)
 Frame = +2

Query: 14   TCRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFD 193
            TC+LC   +++  H+L  C   K+ W+++ + N I+ A     L L   + +  +N + D
Sbjct: 460  TCQLCKMGIENVFHALVDCKAAKKVWRLSLFDNDIQAAPGQDILSLLHGVKRMRSNADVD 519

Query: 194  LFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATK 373
            LFA   W  W  R   +  G+      ++ KAE ++  ++         R  PS      
Sbjct: 520  LFAAMLWAKWNARNQWLFKGKRENPQSVVAKAEAVMEAYK---------RVQPSAD---- 566

Query: 374  WSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALK 553
                      ++ DA  N  K+  G+G V+RD++  +     +   + GSV  +E  A++
Sbjct: 567  ----------INTDAATNSEKNLAGLGAVIRDENGQVTATAIKVSKFHGSVAYAEAEAME 616

Query: 554  EGLEMCVSAGIRPNIIASDSLLAVQAV 634
             GL++   A ++  I+ SDS   V  V
Sbjct: 617  WGLQVAKDAHVKDVIMESDSQEVVSLV 643


>gb|EAZ03196.1| hypothetical protein OsI_25347 [Oryza sativa Indica Group]
          Length = 858

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
 Frame = +2

Query: 8    TGTCRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNG--TTLDLCCWMIKNLAN 181
            + TC +C    +   H+L  CP  K  W     +N I    +G  T  D     ++ L  
Sbjct: 560  SSTCTICGIEEEDVAHALCRCPQAKFLWLALRNSNDIGFVPDGRWTGSDWILNQLEILVE 619

Query: 182  GEFDLFATCTWLIWKERQSTIHN--------------GQHFKQVDILEKAEGLLLNFQKL 319
             +  +F    W  W  R   +H                 H   ++I +  +  L   + +
Sbjct: 620  PDRVMFLLLLWRAWHIRNEVVHGKHAPPIEASHRFIVSYHTSLLEIKQFPKADLTKGKHV 679

Query: 320  NKKMCGDREDPSHSPAT---KWSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVL 490
              +M G        P T    W  P  G ++L+VD    EH  S GIG ++R+ +  +V 
Sbjct: 680  IGQMVGHSGRHQRQPETLPYTWKKPDTGWMKLNVDGSFQEHDGSGGIGAILRNSAGEVVF 739

Query: 491  AFGRNICYQGSVLESELLALKEGLEMCVSAGIRPNIIASDSLLAVQAV 634
            A   ++   G  LE+ELLA ++GL + +   + P +I SD L A+Q +
Sbjct: 740  ASCGSMNRCGGALEAELLACRDGLTLVLQWTLLPIVIESDCLQAIQLI 787


>ref|XP_004292412.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 369

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 6/213 (2%)
 Frame = +2

Query: 14  TCRLCNFHLDSTIHSLFLCPDIKRTWK-----MTPYANLIKRAKNGTTLDLCCWMIKNLA 178
           +C  C   ++ ++H    C  ++  WK     + PY +         ++++  W + ++ 
Sbjct: 103 SCVFCLNSVEDSLHLFKNCNALRAFWKQYMLQIQPYTH------PSVSIEVWFWDMIDML 156

Query: 179 NGE-FDLFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPS 355
           +GE    F    W+IW ER + +  G+++   ++ E +  LL  +++ ++     ++   
Sbjct: 157 SGETLGAFLMTLWVIWVERNNMVWRGKYYNAANMFEWSITLLREYKECHQHSGSKKK--- 213

Query: 356 HSPATKWSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLES 535
               +KWS PP G+L++++D    +   S G+G VVR+     V  F R   Y  S    
Sbjct: 214 -RAISKWSCPPRGRLKVNIDGSFEQELGSGGVGVVVRNYEGECVATFARPFQYALSAFHM 272

Query: 536 ELLALKEGLEMCVSAGIRPNIIASDSLLAVQAV 634
           E  AL+ G+ +C+  G     + SD +  V A+
Sbjct: 273 EAEALRAGMLICIQQGWEDVEVESDCVNLVHAL 305


>ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623801 [Citrus sinensis]
          Length = 441

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 50/199 (25%), Positives = 85/199 (42%)
 Frame = +2

Query: 17  CRLCNFHLDSTIHSLFLCPDIKRTWKMTPYANLIKRAKNGTTLDLCCWMIKNLANGEFDL 196
           CR C    +  IH+L  C   K+ W+    A  I++      + +   + +     E +L
Sbjct: 163 CRRCGVKNEDVIHALLDCKVAKKVWRNAGCAEEIEKLVQQDLMAVLVEIQRKKGKKELEL 222

Query: 197 FATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPSHSPATKW 376
                W IW  R   I   +       + +AE  L +F+++ K      E    +    W
Sbjct: 223 IVVLCWTIWYSRNLFIFENKREDSQLSIARAEANLDSFRRIKKPSSKILEKQQRNRKQVW 282

Query: 377 SLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLESELLALKE 556
           + PP G  +++VDA VN      G+G ++R+ +  +V A  +   +Q S    E  A+  
Sbjct: 283 NPPPCGWFKINVDAAVNVKDQIAGLGVIIRNSNGEVVAAAIQRSFFQLSSTHMEAEAVIL 342

Query: 557 GLEMCVSAGIRPNIIASDS 613
           G++    AG  P II +DS
Sbjct: 343 GIKSAQRAGFSPMIIETDS 361


>ref|XP_004301010.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 735

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 6/213 (2%)
 Frame = +2

Query: 14  TCRLCNFHLDSTIHSLFLCPDIKRTWK-----MTPYANLIKRAKNGTTLDLCCWMIKNLA 178
           +C  C   ++ ++H    C  ++  WK     + PY +         ++++  W + ++ 
Sbjct: 307 SCVFCLNSVEDSLHLFKNCNALRAFWKQYMLQIQPYTH------PSVSIEVWFWDMIDML 360

Query: 179 NGE-FDLFATCTWLIWKERQSTIHNGQHFKQVDILEKAEGLLLNFQKLNKKMCGDREDPS 355
           +GE    F    W+IW ER + +  G+++   ++ E +  LL  +++ ++     ++   
Sbjct: 361 SGETLGAFLMALWVIWVERNNMVWRGKYYNAANMFEWSTTLLREYKECHQHSGSKKK--- 417

Query: 356 HSPATKWSLPPAGKLRLDVDACVNEHKHSFGIGGVVRDDSNNLVLAFGRNICYQGSVLES 535
               +KWS  P G+L++++D    +   S G+G VVR+     V  F R   Y  S    
Sbjct: 418 -RAISKWSCLPRGRLKVNIDGSFEQELGSGGVGVVVRNYEGECVATFARPFQYALSAFHM 476

Query: 536 ELLALKEGLEMCVSAGIRPNIIASDSLLAVQAV 634
           E  AL+ G+ +C+  G     + SD +  V A+
Sbjct: 477 EAEALRAGMLICIQQGWEDVEVESDCVNLVHAL 509